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Pei Wang

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Jeffrey Whiteaker; Ping Yan; Lei Zhao; Chenwei Lin; Pei Wang; Amanda Paulovich
Sequential multiplexed analyte quantification using peptide immunoaffinity enrichment coupled to mass spectrometry.
Jeffrey R Whiteaker; Ping Yan; Lei Zhao; Regine M Schoenherr; Izabela Sokal; Mary Trute; Uliana J Voytovich; Pei Wang; Lynn Amon; Lewis A Chodosh; Philip R Gafken; Jason M Hogan; Liming Hou; Lisa A Jones; Karen S Kelly-Spratt; Christopher J Kemp; Jacob Kennedy; Alexei Krasnoselsky; Chenwei Lin; Martin W McIntosh; Peter S Nelson; Amanda G Paulovich
A targeted proteomics-based pipeline for verification of biomarkers in plasma.
Regine M Schoenherr; Karen S Kelly-Spratt; ChenWei Lin; Jeffrey Whiteaker; Tao Liu; Ted Holzman; Ilsa Coleman; Li-Chia Feng; Travis D Lorentzen; Alexei L Krasnoselsky; Pei Wang; Yan Liu; Kay E Gurley; Lynn M Amon; Athena A Schepmoes; Ronald J Moore; David G Camp; Lewis A Chodosh; Richard D Smith; Peter S Nelson; Martin W McIntosh; Christopher J Kemp; Amanda Paulovich
Proteome and transcriptome profiles of a Her2/Neu-driven mouse model of breast cancer.

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All Publications

2012: Jeffrey Whiteaker; Ping Yan; Lei Zhao; Chenwei Lin; Pei Wang; Amanda Paulovich
Sequential multiplexed analyte quantification using peptide immunoaffinity enrichment coupled to mass spectrometry.
Molecular & cellular proteomics : MCP 2012;11(6):M111.015347.
2011: Jeffrey R Whiteaker; Ping Yan; Lei Zhao; Regine M Schoenherr; Izabela Sokal; Mary Trute; Uliana J Voytovich; Pei Wang; Lynn Amon; Lewis A Chodosh; Philip R Gafken; Jason M Hogan; Liming Hou; Lisa A Jones; Karen S Kelly-Spratt; Christopher J Kemp; Jacob Kennedy; Alexei Krasnoselsky; Chenwei Lin; Martin W McIntosh; Peter S Nelson; Amanda G Paulovich
A targeted proteomics-based pipeline for verification of biomarkers in plasma.
Nature biotechnology 2011;29(7):625-34.
2011: Regine M Schoenherr; Karen S Kelly-Spratt; ChenWei Lin; Jeffrey Whiteaker; Tao Liu; Ted Holzman; Ilsa Coleman; Li-Chia Feng; Travis D Lorentzen; Alexei L Krasnoselsky; Pei Wang; Yan Liu; Kay E Gurley; Lynn M Amon; Athena A Schepmoes; Ronald J Moore; David G Camp; Lewis A Chodosh; Richard D Smith; Peter S Nelson; Martin W McIntosh; Christopher J Kemp; Amanda Paulovich
Proteome and transcriptome profiles of a Her2/Neu-driven mouse model of breast cancer.
Proteomics. Clinical applications 2011;5(3-4):179-88.
2011: Pei Wang; Dennis L Chao; Li Hsu
Learning oncogenic pathways from binary genomic instability data.
Biometrics 2011;67(1):164-73.
2010: Amanda Paulovich; Dean Billheimer; Amy-Joan L Ham; Lorenzo Vega-Montoto; Paul A Rudnick; David L Tabb; Pei Wang; Ronald K Blackman; David M Bunk; Helene L Cardasis; Karl R Clauser; Christopher R Kinsinger; Birgit Schilling; Tony J Tegeler; Asokan Mulayath Variyath; Mu Wang; Jeffrey Whiteaker; Lisa J Zimmerman; David Fenyo; Steven A Carr; Susan J Fisher; Bradford W Gibson; Mehdi Mesri; Thomas A Neubert; Fred E Regnier; Henry Rodriguez; Cliff Spiegelman; Stephen E Stein; Paul Tempst; Daniel C Liebler
Interlaboratory study characterizing a yeast performance standard for benchmarking LC-MS platform performance.
Molecular & cellular proteomics : MCP 2010;9(2):242-54.
2010: Ross L Prentice; Sophie Paczesny; Aaron Aragaki; Lynn M Amon; Lin Chen; Sharon J Pitteri; Martin McIntosh; Pei Wang; Tina Buson Busald; Judith Hsia; Rebecca D Jackson; Jacques E Rossouw; JoAnn E Manson; Karen Johnson; Charles Eaton; Samir M Hanash
Novel proteins associated with risk for coronary heart disease or stroke among postmenopausal women identified by in-depth plasma proteome profiling.
Genome medicine 2010;2(7):48.
2009: Pei Wang; Jeffrey R Whiteaker; Amanda G Paulovich
The evolving role of mass spectrometry in cancer biomarker discovery.
Cancer biology & therapy 2009;8(12):1083-94.
2009: Sharon J Pitteri; Samir M Hanash; Aaron Aragaki; Lynn M Amon; Lin Chen; Tina Busald Buson; Sophie Paczesny; Hiroyuki Katayama; Hong Wang; Melissa M Johnson; Qing Zhang; Martin McIntosh; Pei Wang; Charles Kooperberg; Jacques E Rossouw; Rebecca D Jackson; JoAnn E Manson; Judith Hsia; Simin Liu; Lisa Martin; Ross L Prentice
Postmenopausal estrogen and progestin effects on the serum proteome.
Genome medicine 2009;1(12):121.
2009: Pei Wang
Algorithms for calling gains and losses in array CGH data.
Methods in molecular biology (Clifton, N.J.) 2009;556():99-116.
2007: Jeffrey Whiteaker; Heidi Zhang; Lei Zhao; Pei Wang; Karen S Kelly-Spratt; Richard G Ivey; Brian D Piening; Li-Chia Feng; Erik Kasarda; Kay E Gurley; Jimmy K Eng; Lewis A Chodosh; Christopher J Kemp; Martin W McIntosh; Amanda Paulovich
Integrated pipeline for mass spectrometry-based discovery and confirmation of biomarkers demonstrated in a mouse model of breast cancer.
Journal of proteome research 2007;6(10):3962-75.
2007: Pei Wang; Hua Tang; Matthew Fitzgibbon; Martin McIntosh; Marc Coram; HUI ZHANG; Eugene Yi; Ruedi Aebersold
A statistical method for chromatographic alignment of LC-MS data.
Biostatistics (Oxford, England) 2007;8(2):357-67.
2006: Matthew Bellew; Marc Coram; Matthew Fitzgibbon; Mark Igra; Timothy W Randolph; Pei Wang; Damon May; Jimmy Eng; Ruihua Fang; Chenwei Lin; Jinzhi Chen; David R Goodlett; Jeffrey Whiteaker; Amanda Paulovich; Martin McIntosh
A suite of algorithms for the comprehensive analysis of complex protein mixtures using high-resolution LC-MS.
Bioinformatics (Oxford, England) 2006;22(15):1902-9.
2006: Brian D Piening; Pei Wang; Chaitanya S Bangur; Jeffrey Whiteaker; Heidi Zhang; Li-Chia Feng; John F Keane; Jimmy K Eng; Hua Tang; Amol Prakash; Martin W McIntosh; Amanda Paulovich
Quality control metrics for LC-MS feature detection tools demonstrated on Saccharomyces cerevisiae proteomic profiles.
Journal of proteome research 2006;5(7):1527-34.
2006: Hua Tang; Marc Coram; Pei Wang; Xiaofeng Zhu; Neil Risch
Reconstructing genetic ancestry blocks in admixed individuals.
American journal of human genetics 2006;79(1):1-12.
2006: Pei Wang; Hua Tang; Heidi Zhang; Jeffrey Whiteaker; Amanda Paulovich; Martin McIntosh
Normalization regarding non-random missing values in high-throughput mass spectrometry data.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 2006;():315-26.
2005: Hua Tang; Jie Peng; Pei Wang; Neil J Risch
Estimation of individual admixture: analytical and study design considerations.
Genetic epidemiology 2005;28(4):289-301.