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Scott Watkins

Research Profile

Occupations

Genetics, Population

Genes & Molecular Sequences

Chemicals & Drugs

Physiology

Phenomena

Evolution, Molecular

Concepts & Ideas

Geographic Areas

Procedures

Chromosome Mapping

Living Beings

Continental Population Groups

Co-author Network

Publications

TOP 3
Wilfred Wu; Jinchuan Xing; Erin A S Clark; M Sean Esplin; Tracy A Manuck; Gregory J Stoddard; Michael W Varner; W Scott Watkins; Lynn B Jorde
Effect of interleukin-6 polymorphism on risk of preterm birth within population strata: a meta-analysis.
Robert Beck; Kenneth M Boucher; Lynn B Jorde; Michael J Monument; R Lor Randall; Joshua Schiffman; Richard Smith; W Scott Watkins; Stephen L Lessnick
EWS/FLI-responsive GGAA microsatellites exhibit polymorphic differences between European and African populations.
W Scott Watkins; David J Witherspoon; Scott R Woodward; Jinchuan Xing; Yuhua Zhang; Chad Huff; Ugo A Perego; Lynn B Jorde
Genetic analysis of ancestry, admixture and selection in Bolivian and Totonac populations of the New World.

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All Publications

2013: Wilfred Wu; Jinchuan Xing; Erin A S Clark; M Sean Esplin; Tracy A Manuck; Gregory J Stoddard; Michael W Varner; W Scott Watkins; Lynn B Jorde
Effect of interleukin-6 polymorphism on risk of preterm birth within population strata: a meta-analysis.
BMC genetics 2013;14():30.
2012: Robert Beck; Kenneth M Boucher; Lynn B Jorde; Michael J Monument; R Lor Randall; Joshua Schiffman; Richard Smith; W Scott Watkins; Stephen L Lessnick
EWS/FLI-responsive GGAA microsatellites exhibit polymorphic differences between European and African populations.
Cancer genetics 2012;205(6):304-12.
2012: W Scott Watkins; David J Witherspoon; Scott R Woodward; Jinchuan Xing; Yuhua Zhang; Chad Huff; Ugo A Perego; Lynn B Jorde
Genetic analysis of ancestry, admixture and selection in Bolivian and Totonac populations of the New World.
BMC genetics 2012;13():39.
2012: Chad D Huff; Lynn B Jorde; Subra Kugathasan; Tatum S Simonson; W Scott Watkins; April Whiting; David Witherspoon; Wilfred Wu; Jinchuan Xing; Yuhua Zhang; Michael Bamshad; Jonathan P Bradfield; Kazima Bulayeva or Bulaeva; Chadwick T Davis; Lee A Denson; Chandler Gatenbee; Hakon Hakonarson; Stephen L Guthery
Crohn's disease and genetic hitchhiking at IBD5.
Molecular biology and evolution 2012;29(1):101-11.
2011: Chad D Huff; David Witherspoon; Tatum S Simonson; Jinchuan Xing; W Scott Watkins; Yuhua Zhang; Therese M Tuohy; Deborah W Neklason; Randall W Burt; Stephen L Guthery; Scott R Woodward; Lynn B Jorde
Maximum-likelihood estimation of recent shared ancestry (ERSA).
Genome research 2011;21(5):768-74.
2011: Tatum S Simonson; Jinchuan Xing; Robert Barrett; Edward Jerah; Peter Loa; Yuhua Zhang; W Scott Watkins; David J Witherspoon; Chad D Huff; Scott Woodward; Bryan Mowry; Lynn B Jorde
Ancestry of the Iban is predominantly Southeast Asian: genetic evidence from autosomal, mitochondrial, and Y chromosomes.
PloS one 2011;6(1):e16338.
2010: Jinchuan Xing; W Scott Watkins; Adam Shlien; Erin Walker; Chad D Huff; David J Witherspoon; Yuhua Zhang; Tatum S Simonson; Robert B Weiss; Joshua Schiffman; David Malkin; Scott R Woodward; Lynn B Jorde
Toward a more uniform sampling of human genetic diversity: a survey of worldwide populations by high-density genotyping.
Genomics 2010;96(4):199-210.
2010: W Scott Watkins; Andreas Rohrwasser; Andy P Peiffer; Mark F Leppert; Jean-Marc Lalouel; Lynn B Jorde
AGT genetic variation, plasma AGT, and blood pressure: An analysis of the Utah Genetic Reference Project pedigrees.
American journal of hypertension 2010;23(8):917-23.
2010: Tatum S Simonson; Yuhua Zhang; Chad D Huff; Jinchuan Xing; W Scott Watkins; David J Witherspoon; Scott R Woodward; Lynn B Jorde
Limited distribution of a cardiomyopathy-associated variant in India.
Annals of human genetics 2010;74(2):184-8.
2010: Jinchuan Xing; W Scott Watkins; Ya Hu; Chad D Huff; Aniko Sabo; Donna M Muzny; Michael J Bamshad; Richard A Gibbs; Lynn B Jorde; Fuli Yu
Genetic diversity in India and the inference of Eurasian population expansion.
Genome biology 2010;11(11):R113.
2010: David Witherspoon; Jinchuan Xing; Yuhua Zhang; W Scott Watkins; Mark A Batzer; Lynn B Jorde
Mobile element scanning (ME-Scan) by targeted high-throughput sequencing.
BMC genomics 2010;11():410.
2010: W Scott Watkins; Steven C Hunt; Gordon H Williams; Whitney Tolpinrud; Xavier Jeunemaitre; Jean-Marc Lalouel; Lynn B Jorde
Genotype-phenotype analysis of angiotensinogen polymorphisms and essential hypertension: the importance of haplotypes.
Journal of hypertension 2010;28(1):65-75.
2009: Jinchuan Xing; W Scott Watkins; David Witherspoon; Yuhua Zhang; Stephen L Guthery; Rangaswamy Thara; Bryan J Mowry; Kazima Bulayeva or Bulaeva; Robert B Weiss; Lynn B Jorde
Fine-scaled human genetic structure revealed by SNP microarrays.
Genome research 2009;19(5):815-25.
2009: David Witherspoon; W Scott Watkins; Yuhua Zhang; Jinchuan Xing; Whitney L Tolpinrud; Dale Hedges; Mark A Batzer; Lynn B Jorde
Alu repeats increase local recombination rates.
BMC genomics 2009;10():530.
2008: Jinchuan Xing; W Scott Watkins; Yuhua Zhang; David J Witherspoon; Lynn B Jorde
High fidelity of whole-genome amplified DNA on high-density single nucleotide polymorphism arrays.
Genomics 2008;92(6):452-6.
2008: Kunal Gangwal; Savita Sankar; Peter C. Hollenhorst; Michelle Kinsey; Stephen C Haroldsen; Atul A Shah; Kenneth M Boucher; W Scott Watkins; Lynn B Jorde; Barbara J Graves; Stephen L Lessnick
Microsatellites as EWS/FLI response elements in Ewing's sarcoma.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(29):10149-54.
2008: Jinchuan Xing; David J Witherspoon; W Scott Watkins; Yuhua Zhang; Whitney Tolpinrud; Lynn B Jorde
HapMap tagSNP transferability in multiple populations: general guidelines.
Genomics 2008;92(1):41-51.
2008: W Scott Watkins; R Thara; B J Mowry; Y Zhang; D J Witherspoon; W Tolpinrud; Michael Bamshad; S Tirupati; R Padmavati; H Smith; D Nancarrow; C Filippich; Lynn B Jorde
Genetic variation in South Indian castes: evidence from Y-chromosome, mitochondrial, and autosomal polymorphisms.
BMC genetics 2008;9():86.
2008: EE Marchani; W Scott Watkins; Kazima Bulayeva or Bulaeva; Henry Harpending; Lynn B Jorde
Culture creates genetic structure in the Caucasus: autosomal, mitochondrial, and Y-chromosomal variation in Daghestan.
BMC genetics 2008;9():47.
2007: David Witherspoon; Stephen Wooding; Alan R Rogers; EE Marchani; W Scott Watkins; Mark A Batzer; Lynn B Jorde
Genetic similarities within and between human populations.
Genetics 2007;176(1):351-9.
2006: David Witherspoon; EE Marchani; W Scott Watkins; Christopher T Ostler; Stephen Wooding; Bridget A Anders; Justin D Fowlkes; Stéphane Boissinot; Anthony V Furano; David A Ray; Alan R Rogers; Mark A Batzer; Lynn B Jorde
Human population genetic structure and diversity inferred from polymorphic L1(LINE-1) and Alu insertions.
Human heredity 2006;62(1):30-46.
2005: W Scott Watkins; B V Ravi Prasad; Jammigumpula M Naidu; BB Rao; B A Bhanu; B Ramachandran; Pradipta K Das; P B Gai; P C Reddy; P Govinda Reddy; M Sethuraman; Michael Bamshad; Lynn B Jorde
Diversity and divergence among the tribal populations of India.
Annals of human genetics 2005;69(Pt 6):680-92.
2005: Mark D Shriver; Rui Mei; Esteban J Parra; Vibhor Sonpar; INDRANI HALDER; Sarah A Tishkoff; Theodore G Schurr; Sergev I Zhadanov; Ludmila P Osipova; Tom D Brutsaert; Jonathan Friedlaender; Lynn B Jorde; W Scott Watkins; Michael Bamshad; Gerardo Gutierrez; Halina Loi; Hajime Matsuzaki; Rick Kittles; George Argyropoulos; Jose R Fernandez; Joshua M Akey; Keith W Jones
Large-scale SNP analysis reveals clustered and continuous patterns of human genetic variation.
Human genomics 2005;2(2):81-9.
2004: Stephen Wooding; Christopher T Ostler; B V Ravi Prasad; W Scott Watkins; Sandy Sung; Michael Bamshad; Lynn B Jorde
Directional migration in the Hindu castes: inferences from mitochondrial, autosomal and Y-chromosomal data.
Human genetics 2004;115(3):221-9.
2004: Anthony B Carter; Abdel Halim Salem; Dale Hedges; Catherine Nguyen Keegan; Beth Kimball; Jerilyn A Walker; W Scott Watkins; Lynn B Jorde; Mark A Batzer
Genome-wide analysis of the human Alu Yb-lineage.
Human genomics 2004;1(3):167-78.
2003: Pauline A Callinan; Dale Hedges; Abdel Halim Salem; Jinchuan Xing; Jerilyn A Walker; Randall K Garber; W Scott Watkins; Michael Bamshad; Lynn B Jorde; Mark A Batzer
Comprehensive analysis of Alu-associated diversity on the human sex chromosomes.
Gene 2003;317(1-2):103-10.
2003: Abdel Halim Salem; Gail E Kilroy; W Scott Watkins; Lynn B Jorde; Mark A Batzer
Recently integrated Alu elements and human genomic diversity.
Molecular biology and evolution 2003;20(8):1349-61.
2003: Bethaney J Vincent; Jeremy S Myers; Huei Jin Ho; Gail E Kilroy; Jerilyn A Walker; W Scott Watkins; Lynn B Jorde; Mark A Batzer
Following the LINEs: an analysis of primate genomic variation at human-specific LINE-1 insertion sites.
Molecular biology and evolution 2003;20(8):1338-48.
2003: W Scott Watkins; Alan R Rogers; Christopher T Ostler; Stephen Wooding; Michael Bamshad; Anna-Marie E Brassington; Marion L Carroll; Son V Nguyen; Jerilyn A Walker; B V Ravi Prasad; P Govinda Reddy; Pradipta K Das; Mark A Batzer; Lynn B Jorde
Genetic variation among world populations: inferences from 100 Alu insertion polymorphisms.
Genome research 2003;13(7):1607-18.
2003: Michael Bamshad; Stephen Wooding; W Scott Watkins; Christopher T Ostler; Mark A Batzer; Lynn B Jorde
Human population genetic structure and inference of group membership.
American journal of human genetics 2003;72(3):578-89.
2003: Abdel Halim Salem; Jeremy S Myers; Anthony C Otieno; W Scott Watkins; Lynn B Jorde; Mark A Batzer
LINE-1 preTa elements in the human genome.
Journal of molecular biology 2003;326(4):1127-46.
2003: Jinchuan Xing; Abdel Halim Salem; Dale Hedges; Gail E Kilroy; W Scott Watkins; John E Schienman; Caro-Beth Stewart; Jerzy Jurka; Lynn B Jorde; Mark A Batzer
Comprehensive analysis of two Alu Yd subfamilies.
Journal of molecular evolution 2003;57 Suppl 1():S76-89.
2002: Stephen Wooding; W Scott Watkins; Michael Bamshad; Diane M Dunn; Robert B Weiss; Lynn B Jorde
DNA sequence variation in a 3.7-kb noncoding sequence 5' of the CYP1A2 gene: implications for human population history and natural selection.
American journal of human genetics 2002;71(3):528-42.
2002: Michael Bamshad; Srinivas Mummidi; Enrique Gonzalez; Seema Ahuja; Diane M Dunn; W Scott Watkins; Stephen Wooding; Anne C Stone; Lynn B Jorde; Robert B Weiss; Sunil Ahuja
A strong signature of balancing selection in the 5' cis-regulatory region of CCR5.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(16):10539-44.
2002: Jeremy S Myers; Bethaney J Vincent; Hunt Udall; W Scott Watkins; Tammy Morrish; Gail E Kilroy; Gary Swergold; Jürgen Henke; Lotte Henke; John V Moran; Lynn B Jorde; Mark A Batzer
A comprehensive analysis of recently integrated human Ta L1 elements.
American journal of human genetics 2002;71(2):312-26.
2001: B V Ravi Prasad; CE Ricker; W Scott Watkins; ME Dixon; BB Rao; Jammigumpula M Naidu; Lynn B Jorde; Michael Bamshad
Mitochondrial DNA variation in Nicobarese Islanders.
Human biology 2001;73(5):715-25.
2001: Lynn B Jorde; W Scott Watkins; Michael Bamshad
Population genomics: a bridge from evolutionary history to genetic medicine.
Human molecular genetics 2001;10(20):2199-207.
2001: Marion L Carroll; Astrid M Roy-Engel; Son V Nguyen; Abdel Halim Salem; E Vogel; B Vincent; J Myers; Z Ahmad; L Nguyen; Mimi C Sammarco; W Scott Watkins; J Henke; W Makalowski; Lynn B Jorde; Prescott L Deininger; Mark A Batzer
Large-scale analysis of the Alu Ya5 and Yb8 subfamilies and their contribution to human genomic diversity.
Journal of molecular biology 2001;311(1):17-40.
2001: Michael Bamshad; Toomas Kivisild; W Scott Watkins; ME Dixon; CE Ricker; BB Rao; Jammigumpula M Naidu; B V Ravi Prasad; P Govinda Reddy; A Rasanayagam; Surinder S Papiha; Richard Villems; Alan J Redd; Michael F Hammer; Son V Nguyen; Marion L Carroll; Mark A Batzer; Lynn B Jorde
Genetic evidence on the origins of Indian caste populations.
Genome research 2001;11(6):994-1004.
2001: W Scott Watkins; CE Ricker; Michael Bamshad; Marion L Carroll; Son V Nguyen; Mark A Batzer; Henry Harpending; Alan R Rogers; Lynn B Jorde
Patterns of ancestral human diversity: an analysis of Alu-insertion and restriction-site polymorphisms.
American journal of human genetics 2001;68(3):738-52.
2000: Lynn B Jorde; W Scott Watkins; Michael Bamshad; ME Dixon; CE Ricker; M T Seielstad; Mark A Batzer
The distribution of human genetic diversity: a comparison of mitochondrial, autosomal, and Y-chromosome data.
American journal of human genetics 2000;66(3):979-88.
2000: Lynn B Jorde; W Scott Watkins; J Kere; Dag Nyman; A W Eriksson
Gene mapping in isolated populations: new roles for old friends?
Human heredity 2000;50(1):57-65.
1999: Toomas Kivisild; Michael Bamshad; Katrin Kaldma; Mait Metspalu; Ene Metspalu; Maere Reidla; Sirle Laos; Jüri Parik; W Scott Watkins; ME Dixon; Surinder S Papiha; Sarabjit Mastana; M R Mir; V Ferak; Richard Villems
Deep common ancestry of indian and western-Eurasian mitochondrial DNA lineages.
Current biology : CB 1999;9(22):1331-4.
1999: W Scott Watkins; Michael Bamshad; ME Dixon; B Bhaskara Rao; Jammigumpula M Naidu; P Govinda Reddy; B V Ravi Prasad; Pradipta K Das; P C Reddy; P B Gai; A Bhanu; Yadlapalli S Kusuma; J Koji Lum; P Fischer; Lynn B Jorde
Multiple origins of the mtDNA 9-bp deletion in populations of South India.
American journal of physical anthropology 1999;109(2):147-58.
1999: Michael Bamshad; Trung Le; W Scott Watkins; ME Dixon; B E Kramer; Amy D Roeder; John C Carey; S Root; A Schinzel; L Van Maldergem; R J Gardner; R C Lin; C E Seidman; J G Seidman; R Wallerstein; E Moran; Rebecca Sutphen; C E Campbell; Lynn B Jorde
The spectrum of mutations in TBX3: Genotype/Phenotype relationship in ulnar-mammary syndrome.
American journal of human genetics 1999;64(6):1550-62.
1999: Michael Bamshad; W Scott Watkins; ME Dixon; Trung Le; Amy D Roeder; B E Kramer; John C Carey; Lynn B Jorde
Reconstructing the history of human limb development: lessons from birth defects.
Pediatric research 1999;45(3):291-9.
1998: Michael Bamshad; W Scott Watkins; ME Dixon; Lynn B Jorde; BB Rao; Jammigumpula M Naidu; B V Ravi Prasad; A Rasanayagam; Michael F Hammer
Female gene flow stratifies Hindu castes.
Nature 1998;395(6703):651-2.
1998: Marek Kimmel; R Chakraborty; JP King; Michael Bamshad; W Scott Watkins; Lynn B Jorde
Signatures of population expansion in microsatellite repeat data.
Genetics 1998;148(4):1921-30.
1997: Lynn B Jorde; Alan R Rogers; Michael Bamshad; W Scott Watkins; Patrycja A Krakowiak; S Sung; J Kere; Henry Harpending
Microsatellite diversity and the demographic history of modern humans.
Proceedings of the National Academy of Sciences of the United States of America 1997;94(7):3100-3.
1997: Patrycja A Krakowiak; JR O'Quinn; John F Bohnsack; W Scott Watkins; John C Carey; Lynn B Jorde; Michael Bamshad
A variant of Freeman-Sheldon syndrome maps to 11p15.5-pter.
American journal of human genetics 1997;60(2):426-32.
1996: Alan R Rogers; A E Fraley; Michael Bamshad; W Scott Watkins; Lynn B Jorde
Mitochondrial mismatch analysis is insensitive to the mutational process.
Molecular biology and evolution 1996;13(7):895-902.
1996: S M Purandare; R Cawthon; L M Nelson; S Sawada; W Scott Watkins; Kenneth Ward; Lynn B Jorde; David H Viskochil
Genotyping of PCR-based polymorphisms and linkage-disequilibrium analysis at the NF1 locus.
American journal of human genetics 1996;59(1):159-66.
1995: Michael Bamshad; Patrycja A Krakowiak; W Scott Watkins; S Root; John C Carey; Lynn B Jorde
A gene for ulnar-mammary syndrome maps to 12q23-q24.1.
Human molecular genetics 1995;4(10):1973-7.
1995: W Scott Watkins; Michael Bamshad; Lynn B Jorde
Population genetics of trinucleotide repeat polymorphisms.
Human molecular genetics 1995;4(9):1485-91.
1995: Lynn B Jorde; Michael Bamshad; W Scott Watkins; R Zenger; A E Fraley; Patrycja A Krakowiak; K D Carpenter; Himla Soodyall; T Jenkins; Alan R Rogers
Origins and affinities of modern humans: a comparison of mitochondrial and nuclear genetic data.
American journal of human genetics 1995;57(3):523-38.
1994: Michael Bamshad; W Scott Watkins; R K Zenger; John F Bohnsack; John C Carey; Britt Otterud; Patrycja A Krakowiak; M Robertson; Lynn B Jorde
A gene for distal arthrogryposis type I maps to the pericentromeric region of chromosome 9.
American journal of human genetics 1994;55(6):1153-8.
1994: W Scott Watkins; R Zenger; E O'Brien; Dag Nyman; A W Eriksson; M Renlund; Lynn B Jorde
Linkage disequilibrium patterns vary with chromosomal location: a case study from the von Willebrand factor region.
American journal of human genetics 1994;55(2):348-55.
1994: Lynn B Jorde; W Scott Watkins; M Carlson; Joanna Groden; H Albertsen; A Thliveris; M Leppert
Linkage disequilibrium predicts physical distance in the adenomatous polyposis coli region.
American journal of human genetics 1994;54(5):884-98.
1993: Lynn B Jorde; W Scott Watkins; David H Viskochil; Peter O'Connell; Kenneth Ward
Linkage disequilibrium in the neurofibromatosis 1 (NF1) region: implications for gene mapping.
American journal of human genetics 1993;53(5):1038-50.
1991: W Scott Watkins; Peter O'Connell; J Stevens; M Culver; A Ewart; Lynn B Jorde
A BglII RFLP near the human neurofibromatosis type 1 (NF1) gene.
Nucleic acids research 1991;19(23):6662.
1991: D Marcey; W Scott Watkins; Tulle Hazelrigg
The temporal and spatial distribution pattern of maternal exuperantia protein: evidence for a role in establishment but not maintenance of bicoid mRNA localization.
The EMBO journal 1991;10(13):4259-66.
1990: Tulle Hazelrigg; W Scott Watkins; D Marcey; C Tu; M Karow; X R Lin
The exuperantia gene is required for Drosophila spermatogenesis as well as anteroposterior polarity of the developing oocyte, and encodes overlapping sex-specific transcripts.
Genetics 1990;126(3):607-17.