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Jonathan Wendel

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

Research Profile (preview)

Living Beings

Anatomy

Genes & Molecular Sequences

Phenomena

Molecular Evolution

Concepts & Ideas

Chemicals & Drugs

Physiology

Objects

Cotton Fiber

Procedures

Chromosome Mapping

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Network (preview)

Co-Publications
Name
11
Paterson, Andrew
10
Flagel, Lex
10
Udall, Joshua
10
Cronn, Richard
9
Small, Randall
7
Hovav, Ran
6
Wing, Rod
6
Adams, Keith
5
Hawkins, Jennifer
5
Rong, Junkang
5
Percifield, Ryan
5
Wilkins, Thea
4
Pierce, Gary
4
Grover, Corrinne
3
Chee, Peng

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Publications

TOP 3
Hawkins Jennifer S; Proulx Stephen R; Rapp Ryan A; Wendel Jonathan F
Rapid DNA loss as a counterbalance to genome expansion through retrotransposon proliferation in plants.
Flagel Lex E; Wendel Jonathan F
Gene duplication and evolutionary novelty in plants.
Flagel Lex E; Chen Liping; Chaudhary Bhupendra; Wendel Jonathan F
Coordinated and fine-scale control of homoeologous gene expression in allotetraploid cotton.

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All Publications

2009: Hawkins Jennifer S; Proulx Stephen R; Rapp Ryan A; Wendel Jonathan F
Rapid DNA loss as a counterbalance to genome expansion through retrotransposon proliferation in plants.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(42):17811-6.
2009: Flagel Lex E; Wendel Jonathan F
Gene duplication and evolutionary novelty in plants.
The New phytologist 2009;183(3):557-64.
2009: Flagel Lex E; Chen Liping; Chaudhary Bhupendra; Wendel Jonathan F
Coordinated and fine-scale control of homoeologous gene expression in allotetraploid cotton.
The Journal of heredity 2009;100(4):487-90.
2009: Chaudhary Bhupendra; Flagel Lex; Stupar Robert M; Udall Joshua A; Verma Neetu; Springer Nathan M; Wendel Jonathan F
Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (gossypium).
Genetics 2009;182(2):503-17.
2009: Chaudhary Bhupendra; Hovav Ran; Flagel Lex; Mittler Ron; Wendel Jonathan F
Parallel expression evolution of oxidative stress-related genes in fiber from wild and domesticated diploid and polyploid cotton (Gossypium).
BMC genomics 2009;10():378.
2009: Rapp Ryan A; Udall Joshua A; Wendel Jonathan F
Genomic expression dominance in allopolyploids.
BMC biology 2009;7():18.
2008: Chaudhary Bhupendra; Hovav Ran; Rapp Ryan; Verma Neetu; Udall Joshua A; Wendel Jonathan F
Global analysis of gene expression in cotton fibers from wild and domesticated Gossypium barbadense.
Evolution & development 2008;10(5):567-82.
2008: Hovav Ran; Chaudhary Bhupendra; Udall Joshua A; Flagel Lex; Wendel Jonathan F
Parallel domestication, convergent evolution and duplicated gene recruitment in allopolyploid cotton.
Genetics 2008;179(3):1725-33.
2008: Grover Corrinne E; Yu Yeisoo; Wing Rod A; Paterson Andrew H; Wendel Jonathan F
A phylogenetic analysis of indel dynamics in the cotton genus.
Molecular biology and evolution 2008;25(7):1415-28.
2008: Hovav Ran; Udall Joshua A; Chaudhary Bhupendra; Rapp Ryan; Flagel Lex; Wendel Jonathan F
Partitioned expression of duplicated genes during development and evolution of a single cell in a polyploid plant.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(16):6191-5.
2008: Hovav Ran; Udall Joshua A; Chaudhary Bhupendra; Hovav Einat; Flagel Lex; Hu Guanjing; Wendel Jonathan F
The evolution of spinnable cotton fiber entailed prolonged development and a novel metabolism.
PLoS genetics 2008;4(2):e25.
2008: Hawkins Jennifer S; Hu Guanjing; Rapp Ryan A; Grafenberg Jessie L; Wendel Jonathan F
Phylogenetic determination of the pace of transposable element proliferation in plants: copia and LINE-like elements in Gossypium.
Genome / National Research Council Canada = Génome / Conseil national de recherches Canada 2008;51(1):11-8.
2008: Hovav Ran; Udall Joshua A; Hovav Einat; Rapp Ryan; Flagel Lex; Wendel Jonathan F
A majority of cotton genes are expressed in single-celled fiber.
Planta 2008;227(2):319-29.
2008: Flagel Lex; Udall Joshua; Nettleton Dan; Wendel Jonathan
Duplicate gene expression in allopolyploid Gossypium reveals two temporally distinct phases of expression evolution.
BMC biology 2008;6():16.
2007: Percifield Ryan J; Hawkins Jennifer S; McCoy Joe-Ann; Widrlechner Mark P; Wendel Jonathan F
Genetic diversity in Hypericum and AFLP Markers for species-specific identification of H. perforatum L.
Planta medica 2007;73(15):1614-21.
2007: Rong Junkang; Feltus F Alex; Waghmare Vijay N; Pierce Gary J; Chee Peng W; Draye Xavier; Saranga Yehoshua; Wright Robert J; Wilkins Thea A; May O Lloyd; Smith C Wayne; Gannaway John R; Wendel Jonathan F; Paterson Andrew H
Meta-analysis of polyploid cotton QTL shows unequal contributions of subgenomes to a complex network of genes and gene clusters implicated in lint fiber development.
Genetics 2007;176(4):2577-88.
2007: Grover Corrinne E; Kim Hyeran; Wing Rod A; Paterson Andrew H; Wendel Jonathan F
Microcolinearity and genome evolution in the AdhA region of diploid and polyploid cotton (Gossypium).
The Plant journal : for cell and molecular biology 2007;50(6):995-1006.
2007: Grover Corrinne E; Hawkins Jennifer S; Wendel Jonathan F
Tobacco genomes quickly go up in smoke.
The New phytologist 2007;175(4):599-602.
2007: Udall Joshua A; Flagel Lex E; Cheung Foo; Woodward Andrew W; Hovav Ran; Rapp Ryan A; Swanson Jordan M; Lee Jinsuk J; Gingle Alan R; Nettleton Dan; Town Christopher D; Chen Z Jeffrey; Wendel Jonathan F
Spotted cotton oligonucleotide microarrays for gene expression analysis.
BMC genomics 2007;8():81.
2006: Hawkins Jennifer S; Kim HyeRan; Nason John D; Wing Rod A; Wendel Jonathan F
Differential lineage-specific amplification of transposable elements is responsible for genome size variation in Gossypium.
Genome research 2006;16(10):1252-61.
2006: Keyte Anna L; Percifield Ryan; Liu Bao; Wendel Jonathan F
Infraspecific DNA methylation polymorphism in cotton (Gossypium hirsutum L.).
The Journal of heredity 2006;97(5):444-50.
2006: Udall Joshua A; Swanson Jordan M; Nettleton Dan; Percifield Ryan J; Wendel Jonathan F
A novel approach for characterizing expression levels of genes duplicated by polyploidy.
Genetics 2006;173(3):1823-7.
2005: Adams Keith L; Wendel Jonathan F
Allele-specific, bidirectional silencing of an alcohol dehydrogenase gene in different organs of interspecific diploid cotton hybrids.
Genetics 2005;171(4):2139-42.
2005: Rapp Ryan A; Wendel Jonathan F
Epigenetics and plant evolution.
The New phytologist 2005;168(1):81-91.
2005: Adams Keith L; Wendel Jonathan F
Novel patterns of gene expression in polyploid plants.
Trends in genetics : TIG 2005;21(10):539-43.
2005: Rong Junkang; Pierce Gary J; Waghmare Vijay N; Rogers Carl J; Desai Aparna; Chee Peng W; May O Lloyd; Gannaway John R; Wendel Jonathan F; Wilkins Thea A; Paterson Andrew H
Genetic mapping and comparative analysis of seven mutants related to seed fiber development in cotton.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2005;111(6):1137-46.
2005: Waghmare Vijay N; Rong Junkang; Rogers Carl J; Pierce Gary J; Wendel Jonathan F; Paterson Andrew H
Genetic mapping of a cross between Gossypium hirsutum (cotton) and the Hawaiian endemic, Gossypium tomentosum.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2005;111(4):665-76.
2005: Adams Keith L; Wendel Jonathan F
Polyploidy and genome evolution in plants.
Current opinion in plant biology 2005;8(2):135-41.
2004: Adams Keith L; Percifield Ryan; Wendel Jonathan F
Organ-specific silencing of duplicated genes in a newly synthesized cotton allotetraploid.
Genetics 2004;168(4):2217-26.
2004: Grover Corrinne E; Kim HyeRan; Wing Rod A; Paterson Andrew H; Wendel Jonathan F
Incongruent patterns of local and global genome size evolution in cotton.
Genome research 2004;14(8):1474-82.
2004: Rong Junkang; Abbey Colette; Bowers John E; Brubaker Curt L; Chang Charlene; Chee Peng W; Delmonte Terrye A; Ding Xiaoling; Garza Juan J; Marler Barry S; Park Chan-hwa; Pierce Gary J; Rainey Katy M; Rastogi Vipin K; Schulze Stefan R; Trolinder Norma L; Wendel Jonathan F; Wilkins Thea A; Williams-Coplin T Dawn; Wing Rod A; Wright Robert J; Zhao Xinping; Zhu Linghua; Paterson Andrew H
A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium).
Genetics 2004;166(1):389-417.
2003: Alvarez I; Wendel J F
Ribosomal ITS sequences and plant phylogenetic inference.
Molecular phylogenetics and evolution 2003;29(3):417-34.
2003: Cronn Richard; Small Randall L; Haselkorn Tamara; Wendel Jonathan F
Cryptic repeated genomic recombination during speciation in Gossypium gossypioides.
Evolution; international journal of organic evolution 2003;57(11):2475-89.
2003: Senchina David S; Alvarez Ines; Cronn Richard C; Liu Bao; Rong Junkang; Noyes Richard D; Paterson Andrew H; Wing Rod A; Wilkins Thea A; Wendel Jonathan F
Rate variation among nuclear genes and the age of polyploidy in Gossypium.
Molecular biology and evolution 2003;20(4):633-43.
2003: Adams Keith L; Cronn Richard; Percifield Ryan; Wendel Jonathan F
Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencing.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(8):4649-54.
2003: Cedroni M L; Cronn R C; Adams K L; Wilkins T A; Wendel J F
Evolution and expression of MYB genes in diploid and polyploid cotton.
Plant molecular biology 2003;51(3):313-25.
2002: Wendel Jonathan F; Cronn Richard C; Alvarez Ines; Liu Bao; Small Randall L; Senchina David S
Intron size and genome size in plants.
Molecular biology and evolution 2002;19(12):2346-52.
2002: Wendel Jonathan F; Cronn Richard C; Johnston J Spencer; Price H James
Feast and famine in plant genomes.
Genetica 2002;115(1):37-47.
2002: Small Randall L; Wendel Jonathan F
Differential evolutionary dynamics of duplicated paralogous Adh loci in allotetraploid cotton (Gossypium).
Molecular biology and evolution 2002;19(5):597-607.
2001: Liu B; Brubaker C L; Mergeai G; Cronn R C; Wendel J F
Polyploid formation in cotton is not accompanied by rapid genomic changes.
Genome / National Research Council Canada = Génome / Conseil national de recherches Canada 2001;44(3):321-30.
2001: Applequist W L; Cronn R; Wendel J F
Comparative development of fiber in wild and cultivated cotton.
Evolution & development 2001;3(1):3-17.
2000: Small R L; Wendel J F
Copy number lability and evolutionary dynamics of the Adh gene family in diploid and tetraploid cotton (Gossypium).
Genetics 2000;155(4):1913-26.
2000: Small R L; Wendel J F
Phylogeny, duplication, and intraspecific variation of Adh sequences in New World diploid cottons (Gossypium l., malvaceae).
Molecular phylogenetics and evolution 2000;16(1):73-84.
2000: Wendel J F; Wessler S R
Retrotransposon-mediated genome evolution on a local ecological scale.
Proceedings of the National Academy of Sciences of the United States of America 2000;97(12):6250-2.
2000: Wendel J F
Genome evolution in polyploids.
Plant molecular biology 2000;42(1):225-49.
2000: Hanson R E; Islam-Faridi M N; Crane C F; Zwick M S; Czeschin D G; Wendel J F; McKnight T D; Price H J; Stelly D M
Ty1-copia-retrotransposon behavior in a polyploid cotton.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 2000;8(1):73-6.
1999: Cronn R C; Small R L; Wendel J F
Duplicated genes evolve independently after polyploid formation in cotton.
Proceedings of the National Academy of Sciences of the United States of America 1999;96(25):14406-11.
1999: Small R L; Ryburn J A; Wendel J F
Low levels of nucleotide diversity at homoeologous Adh loci in allotetraploid cotton (Gossypium L.).
Molecular biology and evolution 1999;16(4):491-501.
1999: Small R L; Wendel J F
The mitochondrial genome of allotetraploid cotton (Gossypium L.).
The Journal of heredity 1999;90(1):251-3.
1998: Baum D A; Small R L; Wendel J F
Biogeography and floral evolution of baobabs (Adansonia, Bombacaceae) as inferred from multiple data sets.
Systematic biology 1998;47(2):181-207.
1998: Zhao X P; Si Y; Hanson R E; Crane C F; Price H J; Stelly D M; Wendel J F; Paterson A H
Dispersed repetitive DNA has spread to new genomes since polyploid formation in cotton.
Genome research 1998;8(5):479-92.
1997: Zhang W; Wendel J F; Clark L G
Bamboozled again! Inadvertent isolation of fungal rDNA sequences from bamboos (Poaceae: Bambusoideae).
Molecular phylogenetics and evolution 1997;8(2):205-17.
1997: Gaut B S; Clark L G; Wendel J F; Muse S V
Comparisons of the molecular evolutionary process at rbcL and ndhF in the grass family (Poaceae).
Molecular biology and evolution 1997;14(7):769-77.
1996: Paterson A H; Lan T H; Reischmann K P; Chang C; Lin Y R; Liu S C; Burow M D; Kowalski S P; Katsar C S; DelMonte T A; Feldmann K A; Schertz K F; Wendel J F
Toward a unified genetic map of higher plants, transcending the monocot-dicot divergence.
Nature genetics 1996;14(4):380-2.
1996: Kelchner S A; Wendel J F
Hairpins create minute inversions in non-coding regions of chloroplast DNA.
Current genetics 1996;30(3):259-62.
1996: Cronn R C; Zhao X; Paterson A H; Wendel J F
Polymorphism and concerted evolution in a tandemly repeated gene family: 5S ribosomal DNA in diploid and allopolyploid cottons.
Journal of molecular evolution 1996;42(6):685-705.
1995: Wendel J F; Schnabel A; Seelanan T
An unusual ribosomal DNA sequence from Gossypium gossypioides reveals ancient, cryptic, intergenomic introgression.
Molecular phylogenetics and evolution 1995;4(3):298-313.
1995: Wendel J F; Schnabel A; Seelanan T
Bidirectional interlocus concerted evolution following allopolyploid speciation in cotton (Gossypium).
Proceedings of the National Academy of Sciences of the United States of America 1995;92(1):280-4.
1994: Reinisch A J; Dong J M; Brubaker C L; Stelly D M; Wendel J F; Paterson A H
A detailed RFLP map of cotton, Gossypium hirsutum x Gossypium barbadense: chromosome organization and evolution in a disomic polyploid genome.
Genetics 1994;138(3):829-47.
1993: VanderWiel P L; Voytas D F; Wendel J F
Copia-like retrotransposable element evolution in diploid and polyploid cotton (Gossypium L.).
Journal of molecular evolution 1993;36(5):429-47.
1989: Wendel J F; Stuber C W; Goodman M M; Beckett J B
Duplicated plastid and triplicated cytosolic isozymes of triosephosphate isomerase in maize (Zea mays L.).
The Journal of heredity 1989;80(3):218-28.
1988: Wendel J F; Goodman M M; Stuber C W; Beckett J B
New isozyme systems for maize (Zea mays L.): aconitate hydratase, adenylate kinase, NADH dehydrogenase, and shikimate dehydrogenase.
Biochemical genetics 1988;26(5-6):421-45.
1987: Edwards M D; Stuber C W; Wendel J F
Molecular-marker-facilitated investigations of quantitative-trait loci in maize. I. Numbers, genomic distribution and types of gene action.
Genetics 1987;116(1):113-25.
1987: Wendel J F; Edwards M D; Stuber C W
Evidence for multilocus genetic control of preferential fertilisation in maize.
Heredity 1987;58 ( Pt 2)():297-301.

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