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Thomas Wilson

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Saccharomyces cerevisiae

Chemicals & Drugs

Physiology

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Thomas E Wilson; Kristine L Witt; Carole yauk; David M DeMarini; Stephen D Dertinger; Bevin P Engelward; Philip C Hanawalt; Mats Ljungman; James T MacGregor; Jeffrey L Schwartz; Stephanie L Smith-Roe; Catherine B Klein
Building on the past, shaping the future: the Environmental Mutagenesis and Genomics Society.
Thirunavukkarasu Velusamy; Thomas E Wilson; David W Bahler; Arul M Chinnaiyan; Timothy T Cornell; Shanker Kalyana-Sundaram; Megan S Lim; Christopher A. Maher; Nallasivam Palanisamy; Daniel R Robinson; Anagh Anant Sahasrabuddhe; Kojo Seys John Elenitoba-Johnson
Recurrent reciprocal RNA chimera involving YPEL5 and PPP1CB in chronic lymphocytic leukemia.
Thomas W Glover; Thomas E Wilson
Breaking news on fragile sites in cancer.

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All Publications

2013: Thomas E Wilson; Kristine L Witt; Carole yauk; David M DeMarini; Stephen D Dertinger; Bevin P Engelward; Philip C Hanawalt; Mats Ljungman; James T MacGregor; Jeffrey L Schwartz; Stephanie L Smith-Roe; Catherine B Klein
Building on the past, shaping the future: the Environmental Mutagenesis and Genomics Society.
Environmental and molecular mutagenesis 2013;54(3):153-7.
2013: Thirunavukkarasu Velusamy; Thomas E Wilson; David W Bahler; Arul M Chinnaiyan; Timothy T Cornell; Shanker Kalyana-Sundaram; Megan S Lim; Christopher A. Maher; Nallasivam Palanisamy; Daniel R Robinson; Anagh Anant Sahasrabuddhe; Kojo Seys John Elenitoba-Johnson
Recurrent reciprocal RNA chimera involving YPEL5 and PPP1CB in chronic lymphocytic leukemia.
Proceedings of the National Academy of Sciences of the United States of America 2013;110(8):3035-40.
2013: Thomas W Glover; Thomas E Wilson
Breaking news on fragile sites in cancer.
Cancer cell 2013;23(2):137-9.
2013: Michelle T Paulsen; Jayendra Prasad; Daniel R Robinson; Brendan Tarrier; Ya-Chun Tsan; Artur Veloso; Joseph G Washburn; Thomas E Wilson; Karan Bedi; Ching-Wei Chang; Chandan Kumar; Emily A Ljungman; Robert Lyons; Mats Ljungman
Coordinated regulation of synthesis and stability of RNA during the acute TNF-induced proinflammatory response.
Proceedings of the National Academy of Sciences of the United States of America 2013;110(6):2240-5.
2013: Kishore K Chiruvella; Zhuobin Liang; Thomas E Wilson
Repair of double-strand breaks by end joining.
Cold Spring Harbor perspectives in biology 2013;5(5):.
2012: Martin F Arlt; Shanda R Birkeland; Sountharia Rajendran; Thomas E Wilson; Thomas W Glover
De novo CNV formation in mouse embryonic stem cells occurs in the absence of Xrcc4-dependent nonhomologous end joining.
PLoS genetics 2012;8(9):e1002981.
2012: Martin F Arlt; Thomas E Wilson; Thomas W Glover
Replication stress and mechanisms of CNV formation.
Current opinion in genetics & development 2012;22(3):204-10.
2012: Heather M McLaughlin; Kevin Talbot; Garth Nicholson; Yi-Chung Lee; Stephan Züchner; James R Lupski; Ya-Ming Hou; Marina Kennerson; Thomas E Wilson; Reiko Sakaguchi; William Giblin; Jeffery Vance; Leslie Biesecker; Anthony Antonellis
A recurrent loss-of-function alanyl-tRNA synthetase (AARS) mutation in patients with Charcot-Marie-Tooth disease type 2N (CMT2N).
Human mutation 2012;33(1):244-53.
2011: Martin F Arlt; Shanda R Birkeland; Alev Cagla Ozdemir; Thomas E Wilson; Thomas W Glover
Hydroxyurea induces de novo copy number variants in human cells.
Proceedings of the National Academy of Sciences of the United States of America 2011;108(42):17360-5.
2011: Martin F Arlt; Alev Cagla Ozdemir; Shanda R Birkeland; Robert H Lyons Jr; Thomas W Glover; Thomas E Wilson
Comparison of constitutional and replication stress-induced genome structural variation by SNP array and mate-pair sequencing.
Genetics 2011;187(3):675-83.
2010: Shanda R Birkeland; Natsuko Jin; Alev Cagla Ozdemir; Robert H Lyons Jr; Lois S Weisman; Thomas E Wilson
Discovery of mutations in Saccharomyces cerevisiae by pooled linkage analysis and whole-genome sequencing.
Genetics 2010;186(4):1127-37.
2010: Heather M McLaughlin; Reiko Sakaguchi; Cuiping Liu; Takao Igarashi; Davut Pehlivan; Kristine Chu; Ram Iyer; Pedro Cruz; Praveen F Cherukuri; Nancy F Hansen; James C Mullikin; Leslie G Biesecker; Thomas E Wilson; Victor Ionasescu; Garth Nicholson; Charles Searby; Kevin Talbot; Jeffery Vance; Stephan Zuchner; Kinga Szigeti; James R Lupski; Ya-Ming Hou; Eric D Green; Anthony Antonellis
Compound heterozygosity for loss-of-function lysyl-tRNA synthetase mutations in a patient with peripheral neuropathy.
American journal of human genetics 2010;87(4):560-6.
2010: Michael R Lieber; Thomas E Wilson
SnapShot: Nonhomologous DNA end joining (NHEJ).
Cell 2010;142(3):496-496.e1.
2010: James M Daley; Thomas E Wilson; Dindial Ramotar
Genetic interactions between HNT3/Aprataxin and RAD27/FEN1 suggest parallel pathways for 5' end processing during base excision repair.
DNA repair 2010;9(6):690-9.
2010: Graham F Brady; Stefanie Galban; Xuwen Liu; venkatesha basrur; Jonathan D Gitlin; Kojo Seys John Elenitoba-Johnson; Thomas E Wilson; Colin S Duckett
Regulation of the copper chaperone CCS by XIAP-mediated ubiquitination.
Molecular and cellular biology 2010;30(8):1923-36.
2009: J J O'Konek; Paul D Boucher; A A Iacco; Thomas E Wilson; Donna S Shewach
MLH1 deficiency enhances tumor cell sensitivity to ganciclovir.
Cancer gene therapy 2009;16(9):683-92.
2008: Phillip L Palmbos; Dongliang Wu; James M Daley; Thomas E Wilson
Recruitment of Saccharomyces cerevisiae Dnl4-Lif1 complex to a double-strand break requires interactions with Yku80 and the Xrs2 FHA domain.
Genetics 2008;180(4):1809-19.
2008: Dongliang Wu; Leana M Topper; Thomas E Wilson
Recruitment and dissociation of nonhomologous end joining proteins at a DNA double-strand break in Saccharomyces cerevisiae.
Genetics 2008;178(3):1237-49.
2008: James M Daley; Thomas E Wilson
Evidence that base stacking potential in annealed 3' overhangs determines polymerase utilization in yeast nonhomologous end joining.
DNA repair 2008;7(1):67-76.
2007: Miroslav Chovanec; Thomas E Wilson
Restricting the ligation step of non-homologous end-joining.
DNA repair 2007;6(12):1890-3.
2007: Rajashree A Deshpande; Thomas E Wilson
Modes of interaction among yeast Nej1, Lif1 and Dnl4 proteins and comparison to human XLF, XRCC4 and Lig4.
DNA repair 2007;6(10):1507-16.
2006: Pierre Hentges; Peter Ahnesorg; Robert S Pitcher; Christopher Bruce; Boris Kysela; Andrew J Green; Julie Bianchi; Thomas E Wilson; Stephen P Jackson; Aidan J Doherty
Evolutionary and functional conservation of the DNA non-homologous end-joining protein, XLF/Cernunnos.
The Journal of biological chemistry 2006;281(49):37517-26.
2006: Robert S Pitcher; Louise M Tonkin; James M Daley; Phillip L Palmbos; Andrew J Green; Tricia L Velting; Anna Brzostek; Malgorzata Korycka-Machala; Steve Cresawn; Jaroslaw Dziadek; Graham F Hatfull; Thomas E Wilson; Aidan J Doherty
Mycobacteriophage exploit NHEJ to facilitate genome circularization.
Molecular cell 2006;23(5):743-8.
2006: Matthew J Pratt-Hyatt; Kevin M Kapadia; Thomas E Wilson; David R Engelke
Increased recombination between active tRNA genes.
DNA and cell biology 2006;25(6):359-64.
2005: Phillip L Palmbos; James M Daley; Thomas E Wilson
Mutations of the Yku80 C terminus and Xrs2 FHA domain specifically block yeast nonhomologous end joining.
Molecular and cellular biology 2005;25(24):10782-90.
2005: James M Daley; Renee L Vander Laan; Aswathi Suresh; Thomas E Wilson
DNA joint dependence of pol X family polymerase action in nonhomologous end joining.
The Journal of biological chemistry 2005;280(32):29030-7.
2005: Robert S Pitcher; Thomas E Wilson; Aidan J Doherty
New insights into NHEJ repair processes in prokaryotes.
Cell cycle (Georgetown, Tex.) 2005;4(5):675-8.
2005: Anandi S Karumbati; Thomas E Wilson
Abrogation of the Chk1-Pds1 checkpoint leads to tolerance of persistent single-strand breaks in Saccharomyces cerevisiae.
Genetics 2005;169(4):1833-44.
2005: James M Daley; Thomas E Wilson
Rejoining of DNA double-strand breaks as a function of overhang length.
Molecular and cellular biology 2005;25(3):896-906.
2005: James M Daley; Phillip L Palmbos; Dongliang Wu; Thomas E Wilson
Nonhomologous end joining in yeast.
Annual review of genetics 2005;39():431-51.
2004: Marina Della; Phillip L Palmbos; Hui-Min Tseng; Louise M Tonkin; James M Daley; Leana M Topper; Robert S Pitcher; Alan E Tomkinson; Thomas E Wilson; Aidan J Doherty
Mycobacterial Ku and ligase proteins constitute a two-component NHEJ repair machine.
Science (New York, N.Y.) 2004;306(5696):683-5.
2004: Rajashree A Deshpande; Thomas E Wilson
Identification of DNA 3'-phosphatase active site residues and their differential role in DNA binding, Mg2+ coordination, and catalysis.
Biochemistry 2004;43(26):8579-89.
2003: Anandi S Karumbati; Rajashree A Deshpande; Arshad Jilani; John R Vance; Dindial Ramotar; Thomas E Wilson
The role of yeast DNA 3'-phosphatase Tpp1 and rad1/Rad10 endonuclease in processing spontaneous and induced base lesions.
The Journal of biological chemistry 2003;278(33):31434-43.
2003: Kefei Yu; Frederic Chedin; Chih-Lin Hsieh; Thomas E Wilson; Michael R Lieber
R-loops at immunoglobulin class switch regions in the chromosomes of stimulated B cells.
Nature immunology 2003;4(5):442-51.
2003: Thomas E Wilson; Leana M Topper; Phillip L Palmbos
Non-homologous end-joining: bacteria join the chromosome breakdance.
Trends in biochemical sciences 2003;28(2):62-6.
2002: John R Vance; Thomas E Wilson
Yeast Tdp1 and Rad1-Rad10 function as redundant pathways for repairing Top1 replicative damage.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(21):13669-74.
2002: Thomas E Wilson
A genomics-based screen for yeast mutants with an altered recombination/end-joining repair ratio.
Genetics 2002;162(2):677-88.
2002: Elissa Karathanasis; Thomas E Wilson
Enhancement of Saccharomyces cerevisiae end-joining efficiency by cell growth stage but not by impairment of recombination.
Genetics 2002;161(3):1015-27.
2001: John R Vance; Thomas E Wilson
Repair of DNA strand breaks by the overlapping functions of lesion-specific and non-lesion-specific DNA 3' phosphatases.
Molecular and cellular biology 2001;21(21):7191-8.
2001: John R Vance; Thomas E Wilson
Uncoupling of 3'-phosphatase and 5'-kinase functions in budding yeast. Characterization of Saccharomyces cerevisiae DNA 3'-phosphatase (TPP1).
The Journal of biological chemistry 2001;276(18):15073-81.
1999: Thomas E Wilson; M R Lieber
Efficient processing of DNA ends during yeast nonhomologous end joining. Evidence for a DNA polymerase beta (Pol4)-dependent pathway.
The Journal of biological chemistry 1999;274(33):23599-609.
1999: X Wu; Thomas E Wilson; Michael R Lieber
A role for FEN-1 in nonhomologous DNA end joining: the order of strand annealing and nucleolytic processing events.
Proceedings of the National Academy of Sciences of the United States of America 1999;96(4):1303-8.
1997: Thomas E Wilson; U Grawunder; Michael R Lieber
Yeast DNA ligase IV mediates non-homologous DNA end joining.
Nature 1997;388(6641):495-8.
1997: U Grawunder; M Wilm; X Wu; Piotr Kulesza; Thomas E Wilson; M Mann; Michael R Lieber
Activity of DNA ligase IV stimulated by complex formation with XRCC4 protein in mammalian cells.
Nature 1997;388(6641):492-5.
1993: Thomas E Wilson; K A Padgett; M Johnston; Jeffrey Milbrandt
A genetic method for defining DNA-binding domains: application to the nuclear receptor NGFI-B.
Proceedings of the National Academy of Sciences of the United States of America 1993;90(19):9186-90.
1993: Thomas E Wilson; Timothy J Fahrner; Jeffrey Milbrandt
The orphan receptors NGFI-B and steroidogenic factor 1 establish monomer binding as a third paradigm of nuclear receptor-DNA interaction.
Molecular and cellular biology 1993;13(9):5794-804.
1993: Thomas E Wilson; A R Mouw; C A Weaver; J Milbrandt; Keith L Parker
The orphan nuclear receptor NGFI-B regulates expression of the gene encoding steroid 21-hydroxylase.
Molecular and cellular biology 1993;13(2):861-8.
1992: Thomas E Wilson; R E Paulsen; K A Padgett; Jeffrey Milbrandt
Participation of non-zinc finger residues in DNA binding by two nuclear orphan receptors.
Science (New York, N.Y.) 1992;256(5053):107-10.
1992: Thomas E Wilson; Mark Day; T Pexton; K A Padgett; M Johnston; Jeffrey Milbrandt
In vivo mutational analysis of the NGFI-A zinc fingers.
The Journal of biological chemistry 1992;267(6):3718-24.
1991: Thomas E Wilson; Timothy J Fahrner; M Johnston; Jeffrey Milbrandt
Identification of the DNA binding site for NGFI-B by genetic selection in yeast.
Science (New York, N.Y.) 1991;252(5010):1296-300.
1989: A L Shen; T D Porter; Thomas E Wilson; Charles B Kasper
Structural analysis of the FMN binding domain of NADPH-cytochrome P-450 oxidoreductase by site-directed mutagenesis.
The Journal of biological chemistry 1989;264(13):7584-9.
1987: T D Porter; Thomas E Wilson; Charles B Kasper
Expression of a functional 78,000 dalton mammalian flavoprotein, NADPH-cytochrome P-450 oxidoreductase, in Escherichia coli.
Archives of biochemistry and biophysics 1987;254(1):353-67.