Username

Password

Preview

Sign-in free and Explore the Exciting World of BiomedExperts:

Over 1.500.000 Profiles
More than 1.800 Organizations worldwide
State of the Art Network Visualizations

Manage your own Profile
Locate Experts in your Country/Region
Locate Experts in your 1. and 2. Level Network
Connect to Experts Worldwide

NetworkView

Edgar Wingender

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

Research Profile (preview)

Chemicals & Drugs

Concepts & Ideas

Physiology

Activities & Behaviors

Software

Occupations

Computational Biology

Sign-in to see full Profile

Sign-in to see all Coauthors

Publications

TOP 3
Goemann Björn; Wingender Edgar; Potapov Anatolij P
An approach to evaluate the topological significance of motifs and other patterns in regulatory networks.
Michael Holger; Hogan Jennifer; Kel Alexander; Kel-Margoulis Olga; Schacherer Frank; Voss Nico; Wingender Edgar
Building a knowledge base for systems pathology.
Wingender Edgar
The TRANSFAC project as an example of framework technology that supports the analysis of genomic regulation.

Sign-in to see all Publications

Sign in free and see...

Visualized networks:

See your personal network in
sophisticated graphical views

GeoTargeted Searches:

Locate experts around the world
and connect with global collaborators

Research Profiles:

See the visualized research activity
of experts around the globe

Sign-in to see more

Geonetwork of Edgar Wingender (preview)

Cities where this author has publications
Cities where co-authors of this author have publications

Flash Player Required

Sign-in to see more

All Publications

2009: Goemann Björn; Wingender Edgar; Potapov Anatolij P
An approach to evaluate the topological significance of motifs and other patterns in regulatory networks.
BMC systems biology 2009;3():53.
2008: Michael Holger; Hogan Jennifer; Kel Alexander; Kel-Margoulis Olga; Schacherer Frank; Voss Nico; Wingender Edgar
Building a knowledge base for systems pathology.
Briefings in bioinformatics 2008;9(6):518-31.
2008: Wingender Edgar
The TRANSFAC project as an example of framework technology that supports the analysis of genomic regulation.
Briefings in bioinformatics 2008;9(4):326-32.
2008: Zubarev Roman A; Nielsen Michael L; Fung Eva M; Savitski Mikhail M; Kel-Margoulis Olga; Wingender Edgar; Kel Alexander
Identification of dominant signaling pathways from proteomics expression data.
Journal of proteomics 2008;71(1):89-96.
2008: Dönitz Jürgen; Goemann Björn; Lizé Muriel; Michael Holger; Sasse Nicole; Wingender Edgar; Potapov Anatolij P
EndoNet: an information resource about regulatory networks of cell-to-cell communication.
Nucleic acids research 2008;36(Database issue):D689-94.
2008: Potapov Anatolij P; Goemann Björn; Wingender Edgar
The pairwise disconnectivity index as a new metric for the topological analysis of regulatory networks.
BMC bioinformatics 2008;9():227.
2007: Degenhardt Jost; Haubrock Martin; Dönitz Jürgen; Wingender Edgar; Crass Torsten
DEEP--a tool for differential expression effector prediction.
Nucleic acids research 2007;35(Web Server issue):W619-24.
2007: Wingender Edgar; Crass Torsten; Hogan Jennifer D; Kel Alexander E; Kel-Margoulis Olga V; Potapov Anatolij P
Integrative content-driven concepts for bioinformatics "beyond the cell".
Journal of biosciences 2007;32(1):169-80.
2007: Wingender Edgar; Hogan Jennifer; Schacherer Frank; Potapov Anatolij P; Kel-Margoulis Olga
Integrating pathway data for systems pathology.
In silico biology 2007;7(2 Suppl):S17-25.
2006: Waleev T; Shtokalo D; Konovalova T; Voss N; Cheremushkin E; Stegmaier P; Kel-Margoulis O; Wingender E; Kel A
Composite Module Analyst: identification of transcription factor binding site combinations using genetic algorithm.
Nucleic acids research 2006;34(Web Server issue):W541-5.
2006: Kel A; Konovalova T; Waleev T; Cheremushkin E; Kel-Margoulis O; Wingender E
Composite Module Analyst: a fitness-based tool for identification of transcription factor binding site combinations.
Bioinformatics (Oxford, England) 2006;22(10):1190-7.
2006: Sauer Tilman; Shelest Ekaterina; Wingender Edgar
Evaluating phylogenetic footprinting for human-rodent comparisons.
Bioinformatics (Oxford, England) 2006;22(4):430-7.
2006: Krull Mathias; Pistor Susanne; Voss Nico; Kel Alexander; Reuter Ingmar; Kronenberg Deborah; Michael Holger; Schwarzer Knut; Potapov Anatolij; Choi Claudia; Kel-Margoulis Olga; Wingender Edgar
TRANSPATH: an information resource for storing and visualizing signaling pathways and their pathological aberrations.
Nucleic acids research 2006;34(Database issue):D546-51.
2006: Potapov Anatolij; Liebich Ines; Dönitz Jürgen; Schwarzer Knut; Sasse Nicole; Schoeps Torsten; Crass Torsten; Wingender Edgar
EndoNet: an information resource about endocrine networks.
Nucleic acids research 2006;34(Database issue):D540-5.
2006: Matys V; Kel-Margoulis O V; Fricke E; Liebich I; Land S; Barre-Dirrie A; Reuter I; Chekmenev D; Krull M; Hornischer K; Voss N; Stegmaier P; Lewicki-Potapov B; Saxel H; Kel A E; Wingender E
TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes.
Nucleic acids research 2006;34(Database issue):D108-10.
2006: Chen Xin; Wu Jian-min; Hornischer Klaus; Kel Alexander; Wingender Edgar
TiProD: the Tissue-specific Promoter Database.
Nucleic acids research 2006;34(Database issue):D104-7.
2006: Potapov Anatolij P; Wingender Edgar
Mining the genome and regulatory networks.
Genome biology 2006;7(3):309.
2005: Potapov Anatolij P; Voss Nico; Sasse Nicole; Wingender Edgar
Topology of mammalian transcription networks.
Genome informatics. International Conference on Genome Informatics 2005;16(2):270-8.
2005: Michael Holger; Chen Xin; Fricke Ellen; Haubrock Martin; Ricanek Remko; Wingender Edgar
Deriving an ontology for human gene expression sources from the CYTOMER database on human organs and cell types.
In silico biology 2005;5(1):61-6.
2005: Shelest Ekaterina; Wingender Edgar
Construction of predictive promoter models on the example of antibacterial response of human epithelial cells.
Theoretical biology & medical modelling 2005;2():2.
2004: Kel Alexander; Reymann Susanne; Matys Volker; Nettesheim Paul; Wingender Edgar; Borlak Jürgen
A novel computational approach for the prediction of networked transcription factors of aryl hydrocarbon-receptor-regulated genes.
Molecular pharmacology 2004;66(6):1557-72.
2004: Kel A; Tikunov Y; Voss N; Wingender E
Recognition of multiple patterns in unaligned sets of sequences: comparison of kernel clustering method with other methods.
Bioinformatics (Oxford, England) 2004;20(10):1512-6.
2004: Choi Claudia; Krull Mathias; Kel Alexander; Kel-Margoulis Olga; Pistor Susanne; Potapov Anatolij; Voss Nico; Wingender Edgar
TRANSPATH-A High Quality Database Focused on Signal Transduction.
Comparative and functional genomics 2004;5(2):163-8.
2004: Stegmaier Philip; Kel Alexander E; Wingender Edgar
Systematic DNA-binding domain classification of transcription factors.
Genome informatics. International Conference on Genome Informatics 2004;15(2):276-86.
2004: Choi Claudia; Crass Torsten; Kel Alexander; Kel-Margoulis Olga; Krull Mathias; Pistor Susanne; Potapov Anatolij; Voss Nico; Wingender Edgar
Consistent re-modeling of signaling pathways and its implementation in the TRANSPATH database.
Genome informatics. International Conference on Genome Informatics 2004;15(2):244-54.
2004: Wingender Edgar
TRANSFAC, TRANSPATH and CYTOMER as starting points for an ontology of regulatory networks.
In silico biology 2004;4(1):55-61.
2003: Deineko I V; Kel' A E; Kel'-Margulis O V; Wingender E; Ratner V A
[Modeling dynamics of gene net, regulating the cell cycle in mammalian cells]
Genetika 2003;39(9):1285-92.
2003: Kel A E; Gössling E; Reuter I; Cheremushkin E; Kel-Margoulis O V; Wingender E
MATCH: A tool for searching transcription factor binding sites in DNA sequences.
Nucleic acids research 2003;31(13):3576-9.
2003: Matys V; Fricke E; Geffers R; Gössling E; Haubrock M; Hehl R; Hornischer K; Karas D; Kel A E; Kel-Margoulis O V; Kloos D-U; Land S; Lewicki-Potapov B; Michael H; Münch R; Reuter I; Rotert S; Saxel H; Scheer M; Thiele S; Wingender E
TRANSFAC: transcriptional regulation, from patterns to profiles.
Nucleic acids research 2003;31(1):374-8.
2003: Münch Richard; Hiller Karsten; Barg Heiko; Heldt Dana; Linz Simone; Wingender Edgar; Jahn Dieter
PRODORIC: prokaryotic database of gene regulation.
Nucleic acids research 2003;31(1):266-9.
2003: Krull Mathias; Voss Nico; Choi Claudia; Pistor Susanne; Potapov Anatolij; Wingender Edgar
TRANSPATH: an integrated database on signal transduction and a tool for array analysis.
Nucleic acids research 2003;31(1):97-100.
2003: Kel-Margoulis Olga V; Tchekmenev Dmitri; Kel Alexander E; Goessling Ellen; Hornischer Klaus; Lewicki-Potapov Birgit; Wingender Edgar
Composition-sensitive analysis of the human genome for regulatory signals.
In silico biology 2003;3(1-2):145-71.
2003: Shelest Ekaterina; Kel Alexander E; Göessling Ellen; Wingender Edgar
Prediction of potential C/EBP/NF-kappaB composite elements using matrix-based search methods.
In silico biology 2003;3(1-2):71-9.
2002: Potapov Anatolij P; Wingender Edgar
Representing the architecture of signal transduction networks in an algebraic form: protein target finding.
Annals of the New York Academy of Sciences 2002;973():1-2.
2002: Liebich I; Bode J; Reuter I; Wingender E
Evaluation of sequence motifs found in scaffold/matrix-attached regions (S/MARs).
Nucleic acids research 2002;30(15):3433-42.
2002: Kloos Dorothee U; Choi Claudia; Wingender Edgar
The TGF-beta--Smad network: introducing bioinformatic tools.
Trends in genetics : TIG 2002;18(2):96-103.
2002: Liebich Ines; Bode Jürgen; Frisch Matthias; Wingender Edgar
S/MARt DB: a database on scaffold/matrix attached regions.
Nucleic acids research 2002;30(1):372-4.
2002: Kel-Margoulis Olga V; Kel Alexander E; Reuter Ingmar; Deineko Igor V; Wingender Edgar
TRANSCompel: a database on composite regulatory elements in eukaryotic genes.
Nucleic acids research 2002;30(1):332-4.
2002: Kel-Margoulis O V; Ivanova T G; Wingender E; Kel A E
Automatic annotation of genomic regulatory sequences by searching for composite clusters.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 2002;():187-98.
2001: Schacherer F; Choi C; Götze U; Krull M; Pistor S; Wingender E
The TRANSPATH signal transduction database: a knowledge base on signal transduction networks.
Bioinformatics (Oxford, England) 2001;17(11):1053-7.
2001: Hehl R; Wingender E
Database-assisted promoter analysis.
Trends in plant science 2001;6(6):251-5.
2001: Kel A E; Kel-Margoulis O V; Farnham P J; Bartley S M; Wingender E; Zhang M Q
Computer-assisted identification of cell cycle-related genes: new targets for E2F transcription factors.
Journal of molecular biology 2001;309(1):99-120.
2001: Wingender E; Chen X; Fricke E; Geffers R; Hehl R; Liebich I; Krull M; Matys V; Michael H; Ohnhäuser R; Prüss M; Schacherer F; Thiele S; Urbach S
The TRANSFAC system on gene expression regulation.
Nucleic acids research 2001;29(1):281-3.
2000: Wingender E; Chen X; Hehl R; Karas H; Liebich I; Matys V; Meinhardt T; Prüss M; Reuter I; Schacherer F
TRANSFAC: an integrated system for gene expression regulation.
Nucleic acids research 2000;28(1):316-9.
2000: Kel-Margoulis O V; Romashchenko A G; Kolchanov N A; Wingender E; Kel A E
COMPEL: a database on composite regulatory elements providing combinatorial transcriptional regulation.
Nucleic acids research 2000;28(1):311-5.
1999: Kolchanov N A; Ponomarenko M P; Frolov A S; Ananko E A; Kolpakov F A; Ignatieva E V; Podkolodnaya O A; Goryachkovskaya T N; Stepanenko I L; Merkulova T I; Babenko V V; Ponomarenko Y V; Kochetov A V; Podkolodny N L; Vorobiev D V; Lavryushev S V; Grigorovich D A; Kondrakhin Y V; Milanesi L; Wingender E; Solovyev V; Overton G C
Integrated databases and computer systems for studying eukaryotic gene expression.
Bioinformatics (Oxford, England) 1999;15(7-8):669-86.
1999: Kel A; Kel-Margoulis O; Babenko V; Wingender E
Recognition of NFATp/AP-1 composite elements within genes induced upon the activation of immune cells.
Journal of molecular biology 1999;288(3):353-76.
1999: Heinemeyer T; Chen X; Karas H; Kel A E; Kel O V; Liebich I; Meinhardt T; Reuter I; Schacherer F; Wingender E
Expanding the TRANSFAC database towards an expert system of regulatory molecular mechanisms.
Nucleic acids research 1999;27(1):318-22.
1998: Heinemeyer T; Wingender E; Reuter I; Hermjakob H; Kel A E; Kel O V; Ignatieva E V; Ananko E A; Podkolodnaya O A; Kolpakov F A; Podkolodny N L; Kolchanov N A
Databases on transcriptional regulation: TRANSFAC, TRRD and COMPEL.
Nucleic acids research 1998;26(1):362-7.
1998: Kolchanov N A; Ponomarenko M P; Kel A E; Kondrakhin YuV; Frolov A S; Kolpakov F A; Goryachkovsky T N; Kel O V; Ananko E A; Ignatieva E V; Podkolodnaya O A; Babenko V N; Stepanenko I L; Romashchenko A G; Merkulova T I; Vorobiev D G; Lavryushev S V; Ponomarenko YuV; Kochetov A V; Kolesov G B; Solovyev V V; Milanesi L; Podkolodny N L; Wingender E; Heinemeyer T
GeneExpress: a computer system for description, analysis, and recognition of regulatory sequences in eukaryotic genome.
Proceedings / ... International Conference on Intelligent Systems for Molecular Biology ; ISMB. International Conference on Intelligent Systems for Molecular Biology 1998;6():95-104.
1998: Reuter I; Werner T; Wingender E
Computer-assisted methods for the identification and characterization of polymerase II promoters.
Genetic engineering 1998;20():25-40.
1998: Pickert L; Reuter I; Klawonn F; Wingender E
Transcription regulatory region analysis using signal detection and fuzzy clustering.
Bioinformatics (Oxford, England) 1998;14(3):244-51.
1997: Ponomarenko M P; Ponomarenko Iu V; Kel' A E; Kolchanov N A; Karas H; Wingender E; Sklenar H
[Computer analysis of conformational features of the eukaryotic TATA-box DNA promotors]
Molekuliarnaia biologiia 1997;31(4):733-40.
1997: Karas H; Kel' E; Kel' O V; Kolchanov N A; Wingender E
[Integrating knowledge on transcriptional regulation of eukaryotic genes based on information from TRANSFAC, TRRD, and COMPEL databases]
Molekuliarnaia biologiia 1997;31(4):637-46.
1997: Kel' O V; Kel' A E; Romashchenko A G; Wingender E; Kolchanov N A
[Composite regulatory elements: classification and description in the COMPEL database]
Molekuliarnaia biologiia 1997;31(4):601-15.
1997: Wingender E; Kel A E; Kel O V; Karas H; Heinemeyer T; Dietze P; Knüppel R; Romaschenko A G; Kolchanov N A
TRANSFAC, TRRD and COMPEL: towards a federated database system on transcriptional regulation.
Nucleic acids research 1997;25(1):265-8.
1997: Wingender E; Karas H; Knüppel R
TRANSFAC database as a bridge between sequence data libraries and biological function.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 1997;():477-85.
1996: Karas H; Knüppel R; Schulz W; Sklenar H; Wingender E
Combining structural analysis of DNA with search routines for the detection of transcription regulatory elements.
Computer applications in the biosciences : CABIOS 1996;12(5):441-6.
1996: Gronwald W; Schomburg D; Harder M P; Mayer H; Paulsen J; Wingender E; Wray V
Structure of recombinant human parathyroid hormone in solution using multidimensional NMR spectroscopy.
Biological chemistry Hoppe-Seyler 1996;377(3):175-86.
1996: Schlüter K D; Wingender E; Tegge W; Piper H M
Parathyroid hormone-related protein antagonizes the action of parathyroid hormone on adult cardiomyocytes.
The Journal of biological chemistry 1996;271(6):3074-8.
1996: Wingender E; Dietze P; Karas H; Knüppel R
TRANSFAC: a database on transcription factors and their DNA binding sites.
Nucleic acids research 1996;24(1):238-41.
1995: Quandt K; Frech K; Karas H; Wingender E; Werner T
MatInd and MatInspector: new fast and versatile tools for detection of consensus matches in nucleotide sequence data.
Nucleic acids research 1995;23(23):4878-84.
1995: Kel O V; Romaschenko A G; Kel A E; Wingender E; Kolchanov N A
A compilation of composite regulatory elements affecting gene transcription in vertebrates.
Nucleic acids research 1995;23(20):4097-103.
1995: Paulsen J; Ochs D; Harder M; Duvos C; Mayer H; Wingender E
Large-scale preparation and biological activity of recombinant human parathyroid hormone.
Journal of biotechnology 1995;39(2):129-36.
1995: Kel A E; Kondrakhin Y V; Kolpakov PhA; Kel O V; Romashenko A G; Wingender E; Milanesi L; Kolchanov N A
Computer tool FUNSITE for analysis of eukaryotic regulatory genomic sequences.
Proceedings / ... International Conference on Intelligent Systems for Molecular Biology ; ISMB. International Conference on Intelligent Systems for Molecular Biology 1995;3():197-205.
1994: Wray V; Federau T; Gronwald W; Mayer H; Schomburg D; Tegge W; Wingender E
The structure of human parathyroid hormone from a study of fragments in solution using 1H NMR spectroscopy and its biological implications.
Biochemistry 1994;33(7):1684-93.
1994: Harder M P; Sanders E A; Wingender E; Deckwer W D
Production of human parathyroid hormone by recombinant Escherichia coli TG1 on synthetic medium.
Journal of biotechnology 1994;32(2):157-64.
1994: Knüppel R; Dietze P; Lehnberg W; Frech K; Wingender E
TRANSFAC retrieval program: a network model database of eukaryotic transcription regulating sequences and proteins.
Journal of computational biology : a journal of computational molecular cell biology 1994;1(3):191-8.
1993: Harder M P; Sanders E A; Wingender E; Deckwer W D
Studies on the production of human parathyroid hormone by recombinant Escherichia coli.
Applied microbiology and biotechnology 1993;39(3):329-34.
1990: Rupp E; Mayer H; Wingender E
The promoter of the human parathyroid hormone gene contains a functional cyclic AMP-response element.
Nucleic acids research 1990;18(19):5677-83.
1989: Schlüter K D; Hellstern H; Wingender E; Mayer H
The central part of parathyroid hormone stimulates thymidine incorporation of chondrocytes.
The Journal of biological chemistry 1989;264(19):11087-92.
1989: Wingender E; Bercz G; Blöcker H; Frank R; Mayer H
Expression of human parathyroid hormone in Escherichia coli.
The Journal of biological chemistry 1989;264(8):4367-73.
1989: Seifart K H; Wang L; Waldschmidt R; Jahn D; Wingender E
Purification of human transcription factor IIIA and its interaction with a chemically synthesized gene encoding human 5 S rRNA.
The Journal of biological chemistry 1989;264(3):1702-9.
1988: Wingender E; Frank R; Blöcker H; Wang L R; Jahn D; Seifart K H
Complete synthesis and transcription in vitro of a gene coding for human ribosomal 5S RNA.
Gene 1988;64(1):77-85.
1988: Wingender E
Compilation of transcription regulating proteins.
Nucleic acids research 1988;16(5):1879-902.
1987: Jahn D; Wingender E; Seifart K H
Transcription complexes for various class III genes differ in parameters of formation and stability towards salt.
Journal of molecular biology 1987;193(2):303-13.
1986: Wingender E; Jahn D; Seifart K H
Association of RNA polymerase III with transcription factors in the absence of DNA.
The Journal of biological chemistry 1986;261(3):1409-13.
1984: Wingender E; Dilloo D; Seifart K H
Zinc ions are differentially required for the transcription of ribosomal 5S RNA and tRNA in a HeLa-cell extract.
Nucleic acids research 1984;12(23):8971-85.
1984: Wingender E; Shi X P; Houpert A; Seifart K H
Isolation of a transcription complex for ribosomal 5S RNA.
The EMBO journal 1984;3(8):1761-8.
1983: Shi X P; Wingender E; Böttrich J; Seifart K H
Faithful transcription of ribosomal 5-S RNA in vitro depends on the presence of several factors.
European journal of biochemistry / FEBS 1983;131(1):189-94.

Sign-in to see more

Sign-in free and Explore the Exciting World of BiomedExperts:

NetworkView

Edgar Wingender

Research Profile (preview)

Chemicals & Drugs

Concepts & Ideas

Physiology

Activities & Behaviors

Occupations

Network (preview)

Publications

Sign in free and see...

Visualized networks:

GeoTargeted Searches:

Research Profiles:

Geonetwork of Edgar Wingender (preview)

All Publications