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Elizabeth Winzeler

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Oligonucleotide Array Sequence Analysis

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Gene Expression Profiling

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TOP 3
Selina Elisabeth Ruth Bopp; A Taylor Bright; Eros Lazzerini Denchi; Neekesh V Dharia; David A Fidock; Geoffrey L Johnston; Fabio L Luna; Micah J Manary; Susan McCormack; Case W McNamara; David Plouffe; John R Walker; Elizabeth A Winzeler
Mitotic evolution of Plasmodium falciparum shows a stable core genome but recombination in antigen families.
Bradley I Coleman; Amy K Bei; Micah Manary; Ulf Ribacke; Elizabeth A Winzeler; Dyann F Wirth; Manoj T Duraisingh
Nuclear repositioning precedes promoter accessibility and is linked to the switching frequency of a Plasmodium falciparum invasion gene.
Kyriacos C Nicolaou; David Sarlah; Donald F Smee; Ya-Ping Sun; Sotirios Totokotsopoulos; Selina Elisabeth Ruth Bopp; Craig W Day; Denis Giguère; Philipp Heretsch; Min Lu; Thu H Nguyen; Ian C Wolf; Elizabeth A Winzeler
Synthesis and biological evaluation of epidithio-, epitetrathio-, and bis-(methylthio)diketopiperazines: synthetic methodology, enantioselective total synthesis of epicoccin G, 8,8'-epi-ent-rostratin B, gliotoxin, gliotoxin G, emethallicin E, and haematocin and discovery of new antiviral and antimalarial agents.

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All Publications

2013: Selina Elisabeth Ruth Bopp; A Taylor Bright; Eros Lazzerini Denchi; Neekesh V Dharia; David A Fidock; Geoffrey L Johnston; Fabio L Luna; Micah J Manary; Susan McCormack; Case W McNamara; David Plouffe; John R Walker; Elizabeth A Winzeler
Mitotic evolution of Plasmodium falciparum shows a stable core genome but recombination in antigen families.
PLoS genetics 2013;9(2):e1003293.
2012: Bradley I Coleman; Amy K Bei; Micah Manary; Ulf Ribacke; Elizabeth A Winzeler; Dyann F Wirth; Manoj T Duraisingh
Nuclear repositioning precedes promoter accessibility and is linked to the switching frequency of a Plasmodium falciparum invasion gene.
Cell host & microbe 2012;12(6):739-50.
2012: Kyriacos C Nicolaou; David Sarlah; Donald F Smee; Ya-Ping Sun; Sotirios Totokotsopoulos; Selina Elisabeth Ruth Bopp; Craig W Day; Denis Giguère; Philipp Heretsch; Min Lu; Thu H Nguyen; Ian C Wolf; Elizabeth A Winzeler
Synthesis and biological evaluation of epidithio-, epitetrathio-, and bis-(methylthio)diketopiperazines: synthetic methodology, enantioselective total synthesis of epicoccin G, 8,8'-epi-ent-rostratin B, gliotoxin, gliotoxin G, emethallicin E, and haematocin and discovery of new antiviral and antimalarial agents.
Journal of the American Chemical Society 2012;134(41):17320-32.
2012: Dominic Hoepfner; Chek Shik Lim; Susan L McCormack; Case W McNamara; Stephan Meister; N Rao Movva; Frank Petersen; Uwe Plikat; David Plouffe; Jeffrey A Porter; Ralph Riedl; Esther K Schmitt; Sven Schuierer; Frank Staedtler; Christian Studer; Frantisek Supek; John A Tallarico; Thomas Aust; Christophe Bodenreider; Simona Cotesta; Thierry T Diagana; Mark C Fishman; Richard J Glynne; Nicole Hartmann; Elizabeth A Winzeler
Selective and specific inhibition of the plasmodium falciparum lysyl-tRNA synthetase by the fungal secondary metabolite cladosporin.
Cell host & microbe 2012;11(6):654-63.
2012: Michael Delves; Stephan Meister; David Plouffe; Christian Scheurer; Robert E Sinden; Elizabeth A Winzeler; Sergio Wittlin; Didier Leroy
The activities of current antimalarial drugs on the life cycle stages of Plasmodium: a comparative study with human and rodent parasites.
PLoS medicine 2012;9(2):e1001169.
2012: A Taylor Bright; Raul Chuquiyauri; Marcelo U Ferreira; Alejandro Llanos-Cuentas; Nicholas J Schork; Ryan Tewhey; Joseph M Vinetz; Shira Abeles; Elizabeth A Winzeler
Whole genome sequencing analysis of Plasmodium vivax using whole genome capture.
BMC genomics 2012;13():262.
2011: Tae-Gyu Nam; David Plouffe; Peter G Schultz; Akhil B Vaidya; Ghislain M C Bonamy; Selina Elisabeth Ruth Bopp; Badry Bursulaya; Neekesh V Dharia; Nobutaka Kato; Hangjun Ke; Susan McCormack; Case W McNamara; Stephan Meister; Elizabeth A Winzeler
A chemical genomic analysis of decoquinate, a Plasmodium falciparum cytochrome b inhibitor.
ACS chemical biology 2011;6(11):1214-22.
2011: Satish Mishra; Ruth S Nussenzweig; Joe Cohen; Xiangming Li; Urvashi Rai; Takayuki Shiratsuchi; Moriya Tsuji; Yannick Vanloubbeeck; Elizabeth A Winzeler; Victor Nussenzweig
Identification of non-CSP antigens bearing CD8 epitopes in mice immunized with irradiated sporozoites.
Vaccine 2011;29(43):7335-42.
2011: Case McNamara; Elizabeth A Winzeler
Target identification and validation of novel antimalarials.
Future microbiology 2011;6(6):693-704.
2011: Eva S Istvan; Neekesh V Dharia; Selina Elisabeth Ruth Bopp; Ilya Y Gluzman; Elizabeth A Winzeler; Daniel E Goldberg
Validation of isoleucine utilization targets in Plasmodium falciparum.
Proceedings of the National Academy of Sciences of the United States of America 2011;108(4):1627-32.
2011: A Taylor Bright; Elizabeth A Winzeler
Noncoding RNA, antigenic variation, and the virulence genes of Plasmodium falciparum.
BMC biology 2011;9():50.
2010: Neekesh V Dharia; A Taylor Bright; Scott J Westenberger; S Whitney Barnes; Serge Batalov; Kelli L Kuhen; Rachel Borboa; Glenn C Federe; Colleen McClean; Joseph M Vinetz; Victor Neyra; Alejandro Llanos-Cuentas; John W Barnwell; John R Walker; Elizabeth A Winzeler
Whole-genome sequencing and microarray analysis of ex vivo Plasmodium vivax reveal selective pressure on putative drug resistance genes.
Proceedings of the National Academy of Sciences of the United States of America 2010;107(46):20045-50.
2010: Neekesh V Dharia; David Plouffe; Selina Elisabeth Ruth Bopp; Gonzalo E González-Páez; Carmen Lucas; Carola Salas; Valeria Soberon; Badry Bursulaya; Tadeusz J Kochel; David J Bacon; Elizabeth A Winzeler
Genome scanning of Amazonian Plasmodium falciparum shows subtelomeric instability and clindamycin-resistant parasites.
Genome research 2010;20(11):1534-44.
2010: Matthias Rottmann; Case McNamara; Bryan K S Yeung; Marcus C S Lee; Bin Zou; Bruce Russell; Patrick Seitz; David Plouffe; Neekesh V Dharia; Jocelyn Tan; Steven B Cohen; Kathryn R Spencer; Gonzalo E González-Páez; Suresh B Lakshminarayana; Anne Goh; Rossarin Suwanarusk; Timothy Jegla; Esther K Schmitt; Hans-Peter Beck; Reto Brun; François Nosten; Laurent Renia; Veronique Dartois; Thomas H Keller; Fidock David; Elizabeth A Winzeler; Thierry T Diagana
Spiroindolones, a potent compound class for the treatment of malaria.
Science (New York, N.Y.) 2010;329(5996):1175-80.
2010: Min Zhang; Clare Fennell; Lisa Ranford-Cartwright; Ramanavelan Sakthivel; Pascale Gueirard; Stephan Meister; Anat Caspi; Christian Doerig; Ruth S Nussenzweig; Renu Tuteja; William J Sullivan; David S Roos; Beatriz M A Fontoura; Robert Ménard; Elizabeth A Winzeler; Victor Nussenzweig
The Plasmodium eukaryotic initiation factor-2alpha kinase IK2 controls the latency of sporozoites in the mosquito salivary glands.
The Journal of experimental medicine 2010;207(7):1465-74.
2010: Jeffrey D Dvorin; Derek C Martyn; Saurabh D Patel; Joshua S Grimley; Christine R Collins; Christine S Hopp; A Taylor Bright; Scott Westenberger; Elizabeth A Winzeler; Michael J Blackman; David A Baker; Thomas J Wandless; Manoj T Duraisingh
A plant-like kinase in Plasmodium falciparum regulates parasite egress from erythrocytes.
Science (New York, N.Y.) 2010;328(5980):910-2.
2010: Neekesh V Dharia; Arnab Chatterjee; Elizabeth A Winzeler
Genomics and systems biology in malaria drug discovery.
Current opinion in investigational drugs (London, England : 2000) 2010;11(2):131-8.
2010: Selina Elisabeth Ruth Bopp; Vandana Ramachandran; Kerstin Henson; Angelina Luzader; Merle Lindstrom; Muriel Spooner; Brian M Steffy; Oscar Suzuki; Chris Janse; Andrew P Waters; Yingyao Zhou; Timothy Wiltshire; Elizabeth A Winzeler
Genome wide analysis of inbred mouse lines identifies a locus containing Ppar-gamma as contributing to enhanced malaria survival.
PloS one 2010;5(5):e10903.
2010: Scott J Westenberger; Colleen McClean; Rana Chattopadhyay; Neekesh V Dharia; Jane M Carlton; John W Barnwell; William E Collins; Stephen L Hoffman; Yingyao Zhou; Joseph M Vinetz; Elizabeth A Winzeler
A systems-based analysis of Plasmodium vivax lifecycle transcription from human to mosquito.
PLoS neglected tropical diseases 2010;4(4):e653.
2009: Tao Wu; Advait Nagle; Tomoyo Sakata; Kerstin Henson; Rachel Borboa; Zhong Chen; Kelli L Kuhen; David Plouffe; Elizabeth A Winzeler; Francisco Adrian; Tove tuntland; Jonathan Chang; Susan Simerson; Steven Howard; Jared Ek; John Isbell; Xianming Deng; Nathanael S Gray; David C Tully; Arnab K Chatterjee
Cell-based optimization of novel benzamides as potential antimalarial leads.
Bioorganic & medicinal chemistry letters 2009;19(24):6970-4.
2009: Elizabeth A Winzeler
Advances in parasite genomics: from sequences to regulatory networks.
PLoS pathogens 2009;5(10):e1000649.
2009: Dyann Wirth; Johanna Daily; Elizabeth A Winzeler; Jill P Mesirov; Aviv Regev
In vivo profiles in malaria are consistent with a novel physiological state.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(27):E70; author reply E71-2.
2009: Scott J Westenberger; Long Cui; Neekesh Dharia; Elizabeth A Winzeler; Liwang Cui
Genome-wide nucleosome mapping of Plasmodium falciparum reveals histone-rich coding and histone-poor intergenic regions and chromatin remodeling of core and subtelomeric genes.
BMC genomics 2009;10():610.
2009: Neekesh V Dharia; Amar Bir Singh Sidhu; Maria Cassera; Scott J Westenberger; Selina Elisabeth Ruth Bopp; Richard Eastman; David Plouffe; Serge Batalov; Daniel J Park; Sarah K Volkman; Dyann F Wirth; Yingyao Zhou; Fidock David; Elizabeth A Winzeler
Use of high-density tiling microarrays to identify mutations globally and elucidate mechanisms of drug resistance in Plasmodium falciparum.
Genome biology 2009;10(2):R21.
2008: Elizabeth A Winzeler
Malaria research in the post-genomic era.
Nature 2008;455(7214):751-6.
2008: David Plouffe; Achim Brinker; Case McNamara; Kerstin Henson; Nobutaka Kato; Kelli Kuhen; Advait Nagle; Francisco Adrián; Jason T Matzen; Paul Anderson; Tae-Gyu Nam; Nathanael S Gray; Arnab Chatterjee; Jeff Janes; Shi Fang Yan; Richard Trager; Jeremy S Caldwell; Peter G Schultz; Yingyao Zhou; Elizabeth A Winzeler
In silico activity profiling reveals the mechanism of action of antimalarials discovered in a high-throughput screen.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(26):9059-64.
2008: Nobutaka Kato; Tomoyo Sakata; Ghislain Breton; Karine G Le Roch; Advait Nagle; Carsten Andersen; Badry Bursulaya; Kerstin Henson; Jeffrey Johnson; Kota Arun Kumar; Felix Marr; Daniel Mason; Case McNamara; David Plouffe; Vandana Ramachandran; Muriel Spooner; Tove tuntland; Yingyao Zhou; Eric C Peters; Arnab Chatterjee; Peter G Schultz; Gary E Ward; Nathanael S Gray; Jeffrey Harper; Elizabeth A Winzeler
Gene expression signatures and small-molecule compounds link a protein kinase to Plasmodium falciparum motility.
Nature chemical biology 2008;4(6):347-56.
2008: Karine G Le Roch; Jeffrey R Johnson; Hugues Ahiboh; Duk-Won D Chung; Jacques Prudhomme; David Plouffe; Kerstin Henson; Yingyao Zhou; William Witola; John R Yates; Choukri Ben Mamoun; Elizabeth A Winzeler; Henri VIAL
A systematic approach to understand the mechanism of action of the bisthiazolium compound T4 on the human malaria parasite, Plasmodium falciparum.
BMC genomics 2008;9():513.
2008: Yingyao Zhou; Vandana Ramachandran; Kota Arun Kumar; Scott Westenberger; Philippe Refour; Bin Zhou; Fengwu Li; Jason A Young; Kaisheng Chen; David Plouffe; Kerstin Henson; Victor Nussenzweig; Jane Carlton; Joseph M Vinetz; Manoj T Duraisingh; Elizabeth A Winzeler
Evidence-based annotation of the malaria parasite's genome using comparative expression profiling.
PloS one 2008;3(2):e1570.
2008: Jason A Young; Jeffery R Johnson; Chris Benner; Shi Fang Yan; Kaisheng Chen; Karine G Le Roch; Yingyao Zhou; Elizabeth A Winzeler
In silico discovery of transcription regulatory elements in Plasmodium falciparum.
BMC genomics 2008;9():70.
2007: Johanna Daily; Daniel Scanfeld; N Pochet; Karine G Le Roch; David Plouffe; M Kamal; Ousmane Sarr; Souleymane MBoup; Omar Ndir; David Wypij; K Levasseur; E Thomas; Pablo Tamayo; C Dong; Yingyao Zhou; Eric S Lander; Daouda Ndiaye; Dyann F Wirth; Elizabeth A Winzeler; Jill P Mesirov; A Regev
Distinct physiological states of Plasmodium falciparum in malaria-infected patients.
Nature 2007;450(7172):1091-5.
2007: Tomoyo Sakata; Elizabeth A Winzeler
Genomics, systems biology and drug development for infectious diseases.
Molecular bioSystems 2007;3(12):841-8.
2007: Agam Prasad Singh; Carlos A Buscaglia; Qian Wang; Agata Levay; Daniel R Nussenzweig; John R Walker; Elizabeth A Winzeler; Hodaka Fujii; Beatriz M A Fontoura; Victor Nussenzweig
Plasmodium circumsporozoite protein promotes the development of the liver stages of the parasite.
Cell 2007;131(3):492-504.
2007: Kota Arun Kumar; Celia R S Garcia; Vandana R Chandran; Nico van Rooijen; Yingyao Zhou; Elizabeth A Winzeler; Victor Nussenzweig
Exposure of Plasmodium sporozoites to the intracellular concentration of potassium enhances infectivity and reduces cell passage activity.
Molecular and biochemical parasitology 2007;156(1):32-40.
2007: Anusha M Gunasekera; Alissa Myrick; Karine G Le Roch; Elizabeth A Winzeler; Dyann F Wirth
Plasmodium falciparum: genome wide perturbations in transcript profiles among mixed stage cultures after chloroquine treatment.
Experimental parasitology 2007;117(1):87-92.
2007: Kirk W Deitsch; Manoj T Duraisingh; Ron Dzikowski; Anusha M Gunasekera; Shahid Khan; Karine G Le Roch; Manuel Llinás; Gunnar Mair; Victoria McGovern; David Roos; Jennifer Shock; Jennifer Sims; Roger Wiegand; Elizabeth A Winzeler
Mechanisms of gene regulation in Plasmodium.
The American journal of tropical medicine and hygiene 2007;77(2):201-8.
2007: Yingyao Zhou; Bin Zhou; Kaisheng Chen; Shi Fang Yan; Frederick J King; Shumei Jiang; Elizabeth A Winzeler
Large-scale annotation of small-molecule libraries using public databases.
Journal of chemical information and modeling 2007;47(4):1386-94.
2007: Anusha M Gunasekera; Alissa Myrick; Kevin T Militello; Jennifer S Sims; Carolyn K Dong; Todd Gierahn; Karine G Le Roch; Elizabeth A Winzeler; Dyann F Wirth
Regulatory motifs uncovered among gene expression clusters in Plasmodium falciparum.
Molecular and biochemical parasitology 2007;153(1):19-30.
2006: Claire Kidgell; Elizabeth A Winzeler
Using the genome to dissect the molecular basis of drug resistance.
Future microbiology 2006;1(2):185-99.
2006: Claire Kidgell; Sarah K Volkman; Johanna Daily; Justin O Borevitz; David Plouffe; Yingyao Zhou; Jeffrey R Johnson; Karine G Le Roch; Ousmane Sarr; Omar Ndir; Souleymane MBoup; Serge Batalov; Dyann F Wirth; Elizabeth A Winzeler
A systematic map of genetic variation in Plasmodium falciparum.
PLoS pathogens 2006;2(6):e57.
2006: Elizabeth A Winzeler
Applied systems biology and malaria.
Nature reviews. Microbiology 2006;4(2):145-51.
2005: Céline Karine Carret; Paul Horrocks; Bernard A Konfortov; Elizabeth A Winzeler; Matloob Qureshi; Chris Newbold; Alasdair Ivens
Microarray-based comparative genomic analyses of the human malaria parasite Plasmodium falciparum using Affymetrix arrays.
Molecular and biochemical parasitology 2005;144(2):177-86.
2005: Jason A Young; Quinton L Fivelman; Peter L Blair; Patricia de la Vega; Karine G Le Roch; Yingyao Zhou; Daniel J Carucci; David A Baker; Elizabeth A Winzeler
The Plasmodium falciparum sexual development transcriptome: a microarray analysis using ontology-based pattern identification.
Molecular and biochemical parasitology 2005;143(1):67-79.
2005: Janine Stubbs; Ken M Simpson; Tony Triglia; David Plouffe; Christopher J Tonkin; Manoj T Duraisingh; Alexander G Maier; Elizabeth A Winzeler; Alan F Cowman
Molecular mechanism for switching of P. falciparum invasion pathways into human erythrocytes.
Science (New York, N.Y.) 2005;309(5739):1384-7.
2005: Ken M Simpson; Jake Baum; Rob Trygve Good; Elizabeth A Winzeler; Alan F Cowman; Terence P Speed
A comparison of match-only algorithms for the analysis of Plasmodium falciparum oligonucleotide arrays.
International journal for parasitology 2005;35(5):523-31.
2005: Johanna Daily; Karine G Le Roch; Ousmane Sarr; Daouda Ndiaye; Amanda Lukens; Yingyao Zhou; Omar Ndir; Souleymane MBoup; Ali Sultan; Elizabeth A Winzeler; Dyann F Wirth
In vivo transcriptome of Plasmodium falciparum reveals overexpression of transcripts that encode surface proteins.
The Journal of infectious diseases 2005;191(7):1196-203.
2005: Yingyao Zhou; Jason A Young; Andrey Santrosyan; Kaisheng Chen; Shi Fang Yan; Elizabeth A Winzeler
In silico gene function prediction using ontology-based pattern identification.
Bioinformatics (Oxford, England) 2005;21(7):1237-45.
2005: Claire Kidgell; Elizabeth A Winzeler
Elucidating genetic diversity with oligonucleotide arrays.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 2005;13(3):225-35.
2005: Jason A Young; Elizabeth A Winzeler
Using expression information to discover new drug and vaccine targets in the malaria parasite Plasmodium falciparum.
Pharmacogenomics 2005;6(1):17-26.
2004: Karine G Le Roch; Jeffrey R Johnson; Laurence Florens; Yingyao Zhou; Andrey Santrosyan; Munira Grainger; Shi Fang Yan; Kim C Williamson; Anthony A Holder; Daniel J Carucci; John R Yates; Elizabeth A Winzeler
Global analysis of transcript and protein levels across the Plasmodium falciparum life cycle.
Genome research 2004;14(11):2308-18.
2004: Johanna Daily; Karine G Le Roch; Ousmane Sarr; Xuemin Fang; Yingyao Zhou; Omar Ndir; Souleymane MBoup; Ali Sultan; Elizabeth A Winzeler; Dyann F Wirth
In vivo transcriptional profiling of Plasmodium falciparum.
Malaria journal 2004;3():30.
2004: Tobili Y Sam-Yellowe; Laurence Florens; Jeffrey R Johnson; Tongmin Wang; Judith A Drazba; Karine G Le Roch; Yingyao Zhou; Serge Batalov; Daniel J Carucci; Elizabeth A Winzeler; John R Yates
A Plasmodium gene family encoding Maurer's cleft membrane proteins: structural properties and expression profiling.
Genome research 2004;14(6):1052-9.
2004: Leah Barrera; Chris Benner; Yong-Chuan Tao; Elizabeth A Winzeler; Yingyao Zhou
Leveraging two-way probe-level block design for identifying differential gene expression with high-density oligonucleotide arrays.
BMC bioinformatics 2004;5():42.
2004: Bryan M O'Neill; Denise Hanway; Elizabeth A Winzeler; Floyd E Romesberg
Coordinated functions of WSS1, PSY2 and TOF1 in the DNA damage response.
Nucleic acids research 2004;32(22):6519-30.
2003: Karine G Le Roch; Yingyao Zhou; Peter L Blair; Munira Grainger; J Kathleen Moch; J David Haynes; Patricia de la Vega; Anthony A Holder; Serge Batalov; Daniel J Carucci; Elizabeth A Winzeler
Discovery of gene function by expression profiling of the malaria parasite life cycle.
Science (New York, N.Y.) 2003;301(5639):1503-8.
2003: Michael Washburn; Antonius Koller; Guy Oshiro; Ryan R Ulaszek; David Plouffe; Cosmin Deciu; Elizabeth A Winzeler; John R Yates
Protein pathway and complex clustering of correlated mRNA and protein expression analyses in Saccharomyces cerevisiae.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(6):3107-12.
2003: Justin O Borevitz; David Liang; David Plouffe; Hur-Song Chang; Tong Zhu; Detlef Weigel; Charles C Berry; Elizabeth A Winzeler; joanne chory
Large-scale identification of single-feature polymorphisms in complex genomes.
Genome research 2003;13(3):513-23.
2003: Elizabeth A Winzeler; Cristian I Castillo-Davis; Guy Oshiro; David Liang; Daniel R Richards; Yingyao Zhou; Daniel L Hartl
Genetic diversity in yeast assessed with whole-genome oligonucleotide arrays.
Genetics 2003;163(1):79-89.
2002: Roy M Williams; Michael Primig; Brian K Washburn; Elizabeth A Winzeler; Michel Bellis; Cyril Sarrauste de Menthiere; Ronald W Davis; Rochelle Easton Esposito
The Ume6 regulon coordinates metabolic and meiotic gene expression in yeast.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(21):13431-6.
2002: Sarah K Volkman; Daniel L Hartl; Dyann F Wirth; Kaare M Nielsen; Mehee Choi; Serge Batalov; Yingyao Zhou; David Plouffe; Karine G Le Roch; Ruben Abagyan; Elizabeth A Winzeler
Excess polymorphisms in genes for membrane proteins in Plasmodium falciparum.
Science (New York, N.Y.) 2002;298(5591):216-8.
2002: Karine G Le Roch; Yingyao Zhou; Serge Batalov; Elizabeth A Winzeler
Monitoring the chromosome 2 intraerythrocytic transcriptome of Plasmodium falciparum using oligonucleotide arrays.
The American journal of tropical medicine and hygiene 2002;67(3):233-43.
2002: Björn Grünenfelder; Elizabeth A Winzeler
Treasures and traps in genome-wide data sets: case examples from yeast.
Nature reviews. Genetics 2002;3(9):653-61.
2002: Qiang Q Que; Elizabeth A Winzeler
Large-scale mutagenesis and functional genomics in yeast.
Functional & integrative genomics 2002;2(4-5):193-8.
2002: Denise Hanway; Jodie K Chin; Gang Xia; Guy Oshiro; Elizabeth A Winzeler; Floyd E Romesberg
Previously uncharacterized genes in the UV- and MMS-induced DNA damage response in yeast.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(16):10605-10.
2002: Guy Oshiro; Lisa M Wodicka; Michael Washburn; John R Yates; David J Lockhart; Elizabeth A Winzeler
Parallel identification of new genes in Saccharomyces cerevisiae.
Genome research 2002;12(8):1210-20.
2002: Daniel L Hartl; Sarah K Volkman; Kaare M Nielsen; Alyssa Barry; Karen P Day; Dyann F Wirth; Elizabeth A Winzeler
The paradoxical population genetics of Plasmodium falciparum.
Trends in parasitology 2002;18(6):266-72.
2001: Mosur K Raghuraman; Elizabeth A Winzeler; David Collingwood; S Hunt; Lisa M Wodicka; AR Conway; David J Lockhart; Ronald W Davis; Bonita J Brewer; Walton L Fangman
Replication dynamics of the yeast genome.
Science (New York, N.Y.) 2001;294(5540):115-21.
2000: Michael Primig; R M Williams; Elizabeth A Winzeler; Gela G Tevzadze; A R Conway; S Y Hwang; Ronald W Davis; Rochelle Easton Esposito
The core meiotic transcriptome in budding yeasts.
Nature genetics 2000;26(4):415-23.
2000: Guy Oshiro; Elizabeth A Winzeler
Aneuploidy--it's more common than you think.
Nature biotechnology 2000;18(7):715-6.
2000: David J Lockhart; Elizabeth A Winzeler
Genomics, gene expression and DNA arrays.
Nature 2000;405(6788):827-36.
2000: Elizabeth A Winzeler; H Liang; D D Shoemaker; R W Davis
Functional analysis of the yeast genome by precise deletion and parallel phenotypic characterization.
Novartis Foundation symposium 2000;229():105-9; discussion 109-11.
1999: Guri Giaever; D D Shoemaker; T W Jones; H Liang; Elizabeth A Winzeler; A Astromoff; Ronald W Davis
Genomic profiling of drug sensitivities via induced haploinsufficiency.
Nature genetics 1999;21(3):278-83.
1999: Elizabeth A Winzeler; B Lee; John H McCusker; Ronald W Davis
Whole genome genetic-typing in yeast using high-density oligonucleotide arrays.
Parasitology 1999;118 Suppl():S73-80.
1999: Elizabeth A Winzeler; M Schena; R W Davis
Fluorescence-based expression monitoring using microarrays.
Methods in enzymology 1999;306():3-18.
1998: Elizabeth A Winzeler; Daniel R Richards; AR Conway; Alan L Goldstein; Sue Kalman; Michael J McCullough; John H McCusker; David A Stevens; Lisa M Wodicka; David J Lockhart; Ronald W Davis
Direct allelic variation scanning of the yeast genome.
Science (New York, N.Y.) 1998;281(5380):1194-7.
1998: RJ Cho; M J Campbell; Elizabeth A Winzeler; Lars M Steinmetz; AR Conway; Lisa M Wodicka; Tyra G Wolfsberg; AE Gabrielian; David Landsman; David J Lockhart; Ronald W Davis
A genome-wide transcriptional analysis of the mitotic cell cycle.
Molecular cell 1998;2(1):65-73.
1997: Elizabeth A Winzeler; R W Davis
Functional analysis of the yeast genome.
Current opinion in genetics & development 1997;7(6):771-6.
1997: Elizabeth A Winzeler; Robert Wheeler; Lucy Shapiro
Transcriptional analysis of the Caulobacter 4.5 S RNA ffs gene and the physiological basis of an ffs mutant with a Ts phenotype.
Journal of molecular biology 1997;272(5):665-76.
1997: Elizabeth A Winzeler; Lucy Shapiro
Translation of the leaderless Caulobacter dnaX mRNA.
Journal of bacteriology 1997;179(12):3981-8.
1996: Elizabeth A Winzeler; Lucy Shapiro
A novel promoter motif for Caulobacter cell cycle-controlled DNA replication genes.
Journal of molecular biology 1996;264(3):412-25.