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Mya Breitbart

Research Profile

Living Beings

Genes & Molecular Sequences

Concepts & Ideas

Procedures

Sequence Analysis, DNA

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Water Microbiology

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Chemicals & Drugs

DNA, Viral

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Publications

TOP 3
Darren S Dunlap; Anthony M Greco; Jorge G Barbosa; Mya Breitbart; Terry Fei Fan Ng; Karyna Rosario; Ian Hewson
Molecular and microscopic evidence of viruses in marine copepods.
Bhakti Dwivedi; Robert A Edwards; Daniel Lundin; Bingjie Xue; Mya Breitbart
A bioinformatic analysis of ribonucleotide reductase genes in phage genomes and metagenomes.
Karyna Rosario; Daisy Stainton; Mya Breitbart; Simona Kraberger; Darren P Martin; Marco Padilla-Rodriguez; Arvind Varsani
Discovery of a novel mastrevirus and alphasatellite-like circular DNA in dragonflies (Epiprocta) from Puerto Rico.

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All Publications

2013: Darren S Dunlap; Anthony M Greco; Jorge G Barbosa; Mya Breitbart; Terry Fei Fan Ng; Karyna Rosario; Ian Hewson
Molecular and microscopic evidence of viruses in marine copepods.
Proceedings of the National Academy of Sciences of the United States of America 2013;110(4):1375-80.
2013: Bhakti Dwivedi; Robert A Edwards; Daniel Lundin; Bingjie Xue; Mya Breitbart
A bioinformatic analysis of ribonucleotide reductase genes in phage genomes and metagenomes.
BMC evolutionary biology 2013;13():33.
2013: Karyna Rosario; Daisy Stainton; Mya Breitbart; Simona Kraberger; Darren P Martin; Marco Padilla-Rodriguez; Arvind Varsani
Discovery of a novel mastrevirus and alphasatellite-like circular DNA in dragonflies (Epiprocta) from Puerto Rico.
Virus research 2013;171(1):231-7.
2012: Karyna Rosario; Daisy Stainton; Jessica Ware; Mya Breitbart; Anisha Dayaram; Simona Kraberger; Milen Marinov; Arvind Varsani
Diverse circular ssDNA viruses discovered in dragonflies (Odonata: Epiprocta).
The Journal of general virology 2012;93(Pt 12):2668-81.
2012: Karyna Rosario; Siobain Duffy; Mya Breitbart
A field guide to eukaryotic circular single-stranded DNA viruses: insights gained from metagenomics.
Archives of virology 2012;157(10):1851-71.
2012: Camille Daniels; Mya Breitbart
Bacterial communities associated with the ctenophores Mnemiopsis leidyi and Beroe ovata.
FEMS microbiology ecology 2012;82(1):90-101.
2012: Anthony Nitti; Janet Siefert; Valeria Souza; Camille A Daniels; David Hollander; Mya Breitbart
Spatially resolved genomic, stable isotopic, and lipid analyses of a modern freshwater microbialite from Cuatro Ciénegas, Mexico.
Astrobiology 2012;12(7):685-98.
2012: Rachel J Parsons; Michael W Lomas; Mya Breitbart; Craig A Carlson
Ocean time-series reveals recurring seasonal patterns of virioplankton dynamics in the northwestern Sargasso Sea.
The ISME journal 2012;6(2):273-84.
2012: Mya Breitbart
Marine viruses: truth or dare.
Annual review of marine science 2012;4():425-48.
2012: Bhakti Dwivedi; Robert A Edwards; Dawn B Goldsmith; Robert Schmieder; Mya Breitbart
PhiSiGns: an online tool to identify signature genes in phages and design PCR primers for examining phage diversity.
BMC bioinformatics 2012;13():37.
2011: Dawn B Goldsmith; Lauren D McDaniel; Ruth-Anne Sandaa; Curtis Suttle; Arvind Varsani; Markus G Weinbauer; Giuseppe Crosti; Bhakti Dwivedi; Mya Breitbart
Development of phoH as a novel signature gene for assessing marine phage diversity.
Applied and environmental microbiology 2011;77(21):7730-9.
2011: Karyna Rosario; Mya Breitbart
Exploring the viral world through metagenomics.
Current opinion in virology 2011;1(4):289-97.
2011: Itai Sharon; Eva-Mari Aro; Natalia Battchikova; Mya Breitbart; Carmela Giglione; Fabian Glaser; Thierry Meinnel; Ron Y Pinter; Forest Rohwer; Oded Béjà
Comparative metagenomics of microbial traits within oceanic viral communities.
The ISME journal 2011;5(7):1178-90.
2011: Terry Fei Fan Ng; Elizabeth Wheeler; Denise Greig; Thomas B Waltzek; Frances Gulland; Mya Breitbart
Metagenomic identification of a novel anellovirus in Pacific harbor seal (Phoca vitulina richardsii) lung samples and its detection in samples from multiple years.
The Journal of general virology 2011;92(Pt 6):1318-23.
2011: Karyna Rosario; Milen Marinov; Daisy Stainton; Simona Kraberger; Elizabeth J Wiltshire; David A Collings; Matthew Walters; Darren P Martin; Mya Breitbart; Arvind Varsani
Dragonfly cyclovirus, a novel single-stranded DNA virus discovered in dragonflies (Odonata: Anisoptera).
The Journal of general virology 2011;92(Pt 6):1302-8.
2011: Kimberly P Tucker; Rachel Parsons; Erin M Symonds; Mya Breitbart
Diversity and distribution of single-stranded DNA phages in the North Atlantic Ocean.
The ISME journal 2011;5(5):822-30.
2011: Terry Fei Fan Ng; Christina Nilsson; Forest Rohwer; Yijun Ruan; Robert Schmieder; Dana L Willner; Simon Anthony; Betty Chau; Yan Wei Lim; Mya Breitbart
Broad surveys of DNA viral diversity obtained through viral metagenomics of mosquitoes.
PloS one 2011;6(6):e20579.
2011: Connor T Skennerton; Florent Angly; Mya Breitbart; Lauren Bragg; Shaomei He; Katherine D McMahon; Philip Hugenholtz; Gene W Tyson
Phage encoded H-NS: a potential achilles heel in the bacterial defence system.
PloS one 2011;6(5):e20095.
2011: Terry Fei Fan Ng; Siobain Duffy; Jane E Polston; Elise Bixby; Gary E Vallad; Mya Breitbart
Exploring the diversity of plant DNA viruses and their satellites using vector-enabled metagenomics on whiteflies.
PloS one 2011;6(4):e19050.
2010: Sanela Svraka; Karyna Rosario; Erwin Duizer; Harrie van Der Avoort; Mya Breitbart; Marion Koopmans
Metagenomic sequencing for virus identification in a public-health setting.
The Journal of general virology 2010;91(Pt 11):2846-56.
2010: Ramy K Aziz; Mya Breitbart; Robert A Edwards
Transposases are the most abundant, most ubiquitous genes in nature.
Nucleic acids research 2010;38(13):4207-17.
2010: Beltran Rodriguez-Brito; Linlin Li; Linda Wegley; Mike Furlan; Florent Angly; Mya Breitbart; John Buchanan; Christelle Desnues; Elizabeth Dinsdale; Robert Edwards; Ben Felts; Matthew Haynes; Hong Liu; David Lipson; Joseph Mahaffy; Anna Belen Martin-Cuadrado; Alex Mira; Jim Nulton; Lejla Pasić; Steve Rayhawk; Jennifer Rodriguez-Mueller; Francisco Rodriguez-Valera; Peter Salamon; Shailaja Srinagesh; Tron Frede Thingstad; Tuong Tran; Rebecca Vega Thurber; Dana Willner; Merry Youle; Forest Rohwer
Viral and microbial community dynamics in four aquatic environments.
The ISME journal 2010;4(6):739-51.
2009: Karyna Rosario; Erin M Symonds; Christopher Sinigalliano; Jill Stewart; Mya Breitbart
Pepper mild mottle virus as an indicator of fecal pollution.
Applied and environmental microbiology 2009;75(22):7261-7.
2009: Florent Angly; Merry Youle; Bahador Nosrat; Shailaja Srinagesh; Beltran Rodriguez-Brito; Patrick McNairnie; Gordafaried Deyanat-Yazdi; Mya Breitbart; Forest Rohwer
Genomic analysis of multiple Roseophage SIO1 strains.
Environmental microbiology 2009;11(11):2863-73.
2009: Karyna Rosario; Christina Nilsson; Yan Wei Lim; Yijun Ruan; Mya Breitbart
Metagenomic analysis of viruses in reclaimed water.
Environmental microbiology 2009;11(11):2806-20.
2009: Karyna Rosario; Siobain Duffy; Mya Breitbart
Diverse circovirus-like genome architectures revealed by environmental metagenomics.
The Journal of general virology 2009;90(Pt 10):2418-24.
2009: Terry Fei Fan Ng; Wm. Kirk Suedmeyer; Elizabeth Wheeler; Frances Gulland; Mya Breitbart
Novel anellovirus discovered from a mortality event of captive California sea lions.
The Journal of general virology 2009;90(Pt 5):1256-61.
2009: Erin M Symonds; Dale W Griffin; Mya Breitbart
Eukaryotic viruses in wastewater samples from the United States.
Applied and environmental microbiology 2009;75(5):1402-9.
2009: Terry Fei Fan Ng; Charles Manire; Kelly Borrowman; Tammy Langer; Llewellyn Ehrhart; Mya Breitbart
Discovery of a novel single-stranded DNA virus from a sea turtle fibropapilloma by using viral metagenomics.
Journal of virology 2009;83(6):2500-9.
2009: Rebecca V Thurber; Matthew Haynes; Mya Breitbart; Linda Wegley; Forest Rohwer
Laboratory procedures to generate viral metagenomes.
Nature protocols 2009;4(4):470-83.
2009: Mya Breitbart; Ana Hoare; Anthony Nitti; Janet Siefert; Matthew Haynes; Elizabeth Dinsdale; Robert Edwards; Valeria Souza; Forest Rohwer; David Hollander
Metagenomic and stable isotopic analyses of modern freshwater microbialites in Cuatro Ciénegas, Mexico.
Environmental microbiology 2009;11(1):16-34.
2008: Mya Breitbart; Matthew Haynes; Scott Kelley; Florent Angly; Robert A Edwards; Ben Felts; Joseph M Mahaffy; Jennifer Mueller; James Nulton; Steve Rayhawk; Beltran Rodriguez-Brito; Peter Salamon; Forest Rohwer
Viral diversity and dynamics in an infant gut.
Research in microbiology 2008;159(5):367-73.
2008: Elizabeth A Dinsdale; Robert A Edwards; Dana Hall; Florent Angly; Mya Breitbart; Jennifer M Brulc; Mike Furlan; Christelle Desnues; Matthew Haynes; Linlin Li; Lauren McDaniel; Mary Ann Moran; Karen E Nelson; Christina Nilsson; Robert Olson; John Paul; Beltran Rodriguez Brito; Yijun Ruan; Brandon K Swan; Rick Stevens; David L Valentine; Rebecca Vega Thurber; Linda Wegley; Bryan A White; Forest Rohwer
Functional metagenomic profiling of nine biomes.
Nature 2008;452(7187):629-32.
2008: Christelle Desnues; Beltran Rodriguez-Brito; Steve Rayhawk; Scott Kelley; Tuong Tran; Matthew Haynes; Hong Liu; Mike Furlan; Linda Wegley; Betty Chau; Yijun Ruan; Dana Hall; Florent Angly; Robert A Edwards; Linlin Li; Rebecca Vega Thurber; R Pamela Reid; Janet Siefert; Valeria Souza; David L Valentine; Brandon K Swan; Mya Breitbart; Forest Rohwer
Biodiversity and biogeography of phages in modern stromatolites and thrombolites.
Nature 2008;452(7185):340-3.
2008: Victor Kunin; Shaomei He; Falk Warnecke; S Brook Peterson; Hector Garcia Martin; Matthew Haynes; Natalia Ivanova; Linda L Blackall; Mya Breitbart; Forest Rohwer; Katherine D McMahon; Philip Hugenholtz
A bacterial metapopulation adapts locally to phage predation despite global dispersal.
Genome research 2008;18(2):293-7.
2008: L McDaniel; Mya Breitbart; Jennifer Mobberley; Amy Long; Matthew Haynes; Forest Rohwer; John H Paul
Metagenomic analysis of lysogeny in Tampa Bay: implications for prophage gene expression.
PloS one 2008;3(9):e3263.
2007: Noah Fierer; Mya Breitbart; James Nulton; Peter Salamon; Catherine Lozupone; Ryan Jones; Michael Robeson; Robert A Edwards; Ben Felts; Steve Rayhawk; Rob Knight; Forest Rohwer; Robert B Jackson
Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil.
Applied and environmental microbiology 2007;73(21):7059-66.
2007: Karl Heinz Hoffmann; Beltran Rodriguez-Brito; Mya Breitbart; David Bangor; Florent Angly; Ben Felts; James Nulton; Forest Rohwer; Peter Salamon
Power law rank-abundance models for marine phage communities.
FEMS microbiology letters 2007;273(2):224-8.
2006: Florent Angly; Ben Felts; Mya Breitbart; Peter Salamon; Robert A Edwards; Craig Carlson; Amy M Chan; Matthew Haynes; Scott Kelley; Hong Liu; Joseph M Mahaffy; Jennifer E Mueller; James Nulton; Robert Olson; Rachel Parsons; Steve Rayhawk; Curtis Suttle; Forest Rohwer
The marine viromes of four oceanic regions.
PLoS biology 2006;4(11):e368.
2006: Veronica Casas; Jon H Miyake; Heather Balsley; Julie Roark; Serena Telles; Steven Leeds; Ivan Zurita; Mya Breitbart; Doug Bartlett; Farooq Azam; Forest Rohwer
Widespread occurrence of phage-encoded exotoxin genes in terrestrial and aquatic environments in Southern California.
FEMS microbiology letters 2006;261(1):141-9.
2006: Robert A Edwards; Beltran Rodriguez-Brito; Linda Wegley; Matthew Haynes; Mya Breitbart; Dean M Peterson; Martin O Saar; Scott Alexander; E Calvin Alexander; Forest Rohwer
Using pyrosequencing to shed light on deep mine microbial ecology.
BMC genomics 2006;7():57.
2006: Yanan Yu; Mya Breitbart; Pat McNairnie; Forest Rohwer
FastGroupII: a web-based bioinformatics platform for analyses of large 16S rDNA libraries.
BMC bioinformatics 2006;7():57.
2006: Tao Zhang; Mya Breitbart; Wah Heng Lee; Jin-Quan Run; Chia-Lin Wei; Shirlena Wee Ling Soh; Martin L Hibberd; Edison Liu; Forest Rohwer; Yijun Ruan
RNA viral community in human feces: prevalence of plant pathogenic viruses.
PLoS biology 2006;4(1):e3.
2005: Mya Breitbart; Forest Rohwer
Method for discovering novel DNA viruses in blood using viral particle selection and shotgun sequencing.
BioTechniques 2005;39(5):729-36.
2005: Mya Breitbart; Forest Rohwer
Here a virus, there a virus, everywhere the same virus?
Trends in microbiology 2005;13(6):278-84.
2005: Mya Breitbart; Ranjeet Bhagooli; Sean Griffin; Ian Johnston; Forest Rohwer
Microbial communities associated with skeletal tumors on Porites compressa.
FEMS microbiology letters 2005;243(2):431-6.
2005: Florent Angly; Beltran Rodriguez-Brito; David Bangor; Pat McNairnie; Mya Breitbart; Peter Salamon; Ben Felts; James Nulton; Joseph M Mahaffy; Forest Rohwer
PHACCS, an online tool for estimating the structure and diversity of uncultured viral communities using metagenomic information.
BMC bioinformatics 2005;6():41.
2004: Veronica Casas; David I Kline; Linda Wegley; Yanan Yu; Mya Breitbart; Forest Rohwer
Widespread association of a Rickettsiales-like bacterium with reef-building corals.
Environmental microbiology 2004;6(11):1137-48.
2004: Mya Breitbart; Jon H Miyake; Forest Rohwer
Global distribution of nearly identical phage-encoded DNA sequences.
FEMS microbiology letters 2004;236(2):249-56.
2004: Mya Breitbart; Ben Felts; Scott Kelley; Joseph M Mahaffy; James Nulton; Peter Salamon; Forest Rohwer
Diversity and population structure of a near-shore marine-sediment viral community.
Proceedings. Biological sciences / The Royal Society 2004;271(1539):565-74.
2004: Mya Breitbart; Linda Wegley; Steven Leeds; Tom Schoenfeld; Forest Rohwer
Phage community dynamics in hot springs.
Applied and environmental microbiology 2004;70(3):1633-40.
2003: Mya Breitbart; Ian Hewson; Ben Felts; Joseph M Mahaffy; James Nulton; Peter Salamon; Forest Rohwer
Metagenomic analyses of an uncultured viral community from human feces.
Journal of bacteriology 2003;185(20):6220-3.
2002: Mya Breitbart; Peter Salamon; Bjarne Andresen; Joseph M Mahaffy; Anca M Segall; David Mead; Farooq Azam; Forest Rohwer
Genomic analysis of uncultured marine viral communities.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(22):14250-5.