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Vicki Wysocki

Research Profile

Procedures

Chemicals & Drugs

Genes & Molecular Sequences

Amino Acid Sequences

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Publications

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Ellene H Mashalidis; Jennifer Rood; Steven R Smith; George A Bray; David B Briggs; Jimmy J Chhun; Ronald K Ellsworth; Rebecca M Giron; Ashley M Vergara; Vicki H Wysocki; Mowei Zhou; Tsu-Shuen Tsao
High-resolution identification of human adiponectin oligomers and regulation by pioglitazone in type 2 diabetic patients.
Katie L Stewart; Vicki H Wysocki; Eric D Dodds; Matthew H J Cordes
A polymetamorphic protein.
Xin Ma; Arpád Somogyi; Vicki H Wysocki; Shai Dagan; Patricia Y Scaraffia
Low Mass MS/MS Fragments of Protonated Amino Acids Used for Distinction of Their (13)C- Isotopomers in Metabolic Studies.

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All Publications

2013: Ellene H Mashalidis; Jennifer Rood; Steven R Smith; George A Bray; David B Briggs; Jimmy J Chhun; Ronald K Ellsworth; Rebecca M Giron; Ashley M Vergara; Vicki H Wysocki; Mowei Zhou; Tsu-Shuen Tsao
High-resolution identification of human adiponectin oligomers and regulation by pioglitazone in type 2 diabetic patients.
Analytical biochemistry 2013;437(2):150-60.
2013: Katie L Stewart; Vicki H Wysocki; Eric D Dodds; Matthew H J Cordes
A polymetamorphic protein.
Protein science : a publication of the Protein Society 2013;22(5):641-9.
2013: Xin Ma; Arpád Somogyi; Vicki H Wysocki; Shai Dagan; Patricia Y Scaraffia
Low Mass MS/MS Fragments of Protonated Amino Acids Used for Distinction of Their (13)C- Isotopomers in Metabolic Studies.
Journal of the American Society for Mass Spectrometry 2013;24(4):622-31.
2013: Mowei Zhou; Shai Dagan; Vicki H Wysocki
Impact of charge state on gas-phase behaviors of noncovalent protein complexes in collision induced dissociation and surface induced dissociation.
The Analyst 2013;138(5):1353-62.
2013: Bradley G. Fritz; Wenzhou Li; Aqeel Ahmed; Jacqueline L Brailey; Linda Breci; Sue A Roberts; Florence Tama; Andrzej Weichsel; Vicki H Wysocki; William R Montfort
Molecular model of a soluble guanylyl cyclase fragment determined by small-angle X-ray scattering and chemical cross-linking.
Biochemistry 2013;52(9):1568-82.
2013: Ashley C Gucinski; Vincent Steinmetz; Julia Chamot-Rooke; Arpád Somogyi; Vicki H Wysocki
Influence of N-terminal residue composition on the structure of proline-containing b2+ ions.
The journal of physical chemistry. A 2013;117(6):1291-8.
2012: David R Bush; Vicki H Wysocki; Patricia Y Scaraffia
Study of the fragmentation of arginine isobutyl ester applied to arginine quantification in Aedes aegypti mosquito excreta.
Journal of mass spectrometry : JMS 2012;47(10):1364-71.
2012: Wenzhou Li; Heather A O'Neill; Vicki H Wysocki
SQID-XLink: implementation of an intensity-incorporated algorithm for cross-linked peptide identification.
Bioinformatics (Oxford, England) 2012;28(19):2548-50.
2012: Tiffany D Mealman; Vicki H Wysocki; Mowei Zhou; Trisiani Affandi; Mariana E Aranguren; Ninian J Blackburn; Kelly N Chacón; Megan M McEvoy
N-terminal region of CusB is sufficient for metal binding and metal transfer with the metallochaperone CusF.
Biochemistry 2012;51(34):6767-75.
2012: Mowei Zhou; Chengsi Huang; Vicki H Wysocki
Surface-induced dissociation of ion mobility-separated noncovalent complexes in a quadrupole/time-of-flight mass spectrometer.
Analytical chemistry 2012;84(14):6016-23.
2012: Donna Wolk; Erin J Kaleta; Vicki H Wysocki
PCR-electrospray ionization mass spectrometry: the potential to change infectious disease diagnostics in clinical and public health laboratories.
The Journal of molecular diagnostics : JMD 2012;14(4):295-304.
2012: Wenzhou Li; Vicki H Wysocki
ETD fragmentation features improve algorithm.
Expert review of proteomics 2012;9(3):241-3.
2012: Ashley C Gucinski; Edith Nicol; Julia Chamot-Rooke; Arpád Somogyi; Vicki H Wysocki
Structural influences on preferential oxazolone versus diketopiperazine b(2+) ion formation for histidine analogue-containing peptides.
The journal of physical chemistry. A 2012;116(17):4296-304.
2012: Mowei Zhou; Shai Dagan; Vicki H Wysocki
Protein subunits released by surface collisions of noncovalent complexes: nativelike compact structures revealed by ion mobility mass spectrometry.
Angewandte Chemie (International ed. in English) 2012;51(18):4336-9.
2012: Brook E Heaton; Julien Herrou; Vicki H Wysocki; Anne E Blackwell; Sean Crosson
Molecular structure and function of the novel BrnT/BrnA toxin-antitoxin system of Brucella abortus.
The Journal of biological chemistry 2012;287(15):12098-110.
2012: Ünige A Laskay; Alan G Barbour; Jennifer Burg; Erin J Kaleta; Sam R Telford Iii; Inger-Marie E Vilcins; Vicki H Wysocki
Development of a host blood meal database: de novo sequencing of hemoglobin from nine small mammals using mass spectrometry.
Biological chemistry 2012;393(3):195-201.
2011: Erin J Kaleta; Jacques Schrenzel; ABDESSALAM CHERKAOUI; Andrew E Clark; Elizabeth L Ingram; Vicki H Wysocki; Donna Wolk
Comparative analysis of PCR-electrospray ionization/mass spectrometry (MS) and MALDI-TOF/MS for the identification of bacteria and yeast from positive blood culture bottles.
Clinical chemistry 2011;57(7):1057-67.
2011: Eric D Dodds; Anne E Blackwell; Christopher M Jones; Katie L Holso; Dawne J O'Brien; Matthew H J Cordes; Vicki H Wysocki
Determinants of gas-phase disassembly behavior in homodimeric protein complexes with related yet divergent structures.
Analytical chemistry 2011;83(10):3881-9.
2011: Anne E Blackwell; Eric D Dodds; Vahe Bandarian; Vicki H Wysocki
Revealing the quaternary structure of a heterogeneous noncovalent protein complex through surface-induced dissociation.
Analytical chemistry 2011;83(8):2862-5.
2011: Tiffany D Mealman; Ireena Bagai; pooja singh; David R Goodlett; Christopher Rensing; Hongjun Zhou; Vicki H Wysocki; Megan M McEvoy
Interactions between CusF and CusB identified by NMR spectroscopy and chemical cross-linking coupled to mass spectrometry.
Biochemistry 2011;50(13):2559-66.
2011: Wenzhou Li; Li Ji; Jonathan Goya; Guanhong Tan; Vicki H Wysocki
SQID: an intensity-incorporated protein identification algorithm for tandem mass spectrometry.
Journal of proteome research 2011;10(4):1593-602.
2011: Erin J Kaleta; Andrew E Clark; Desiree R Johnson; Dulini C Gamage; Vicki H Wysocki; ABDESSALAM CHERKAOUI; Jacques Schrenzel; Donna Wolk
Use of PCR coupled with electrospray ionization mass spectrometry for rapid identification of bacterial and yeast bloodstream pathogens from blood culture bottles.
Journal of clinical microbiology 2011;49(1):345-53.
2010: Yimin Hua; Shai Dagan; Samanthi Wickramasekara; Dylan J Boday; Vicki H Wysocki
Analysis of deprotonated acids with silicon nanoparticle-assisted laser desorption/ ionization mass spectrometry.
Journal of mass spectrometry : JMS 2010;45(12):1394-401.
2010: Wei Jiang; Vicki H Wysocki; Eric D Dodds; Roger L Miesfeld; Patricia Y Scaraffia
Differentiation and quantification of C1 and C2 (13)C-labeled glucose by tandem mass spectrometry.
Analytical biochemistry 2010;404(1):40-4.
2010: Patricia Y Scaraffia; Qingfen Zhang; Kelsey Thorson; Vicki H Wysocki; Roger L Miesfeld
Differential ammonia metabolism in Aedes aegypti fat body and midgut tissues.
Journal of insect physiology 2010;56(9):1040-9.
2010: Ashley C Gucinski; Arpád Somogyi; Julia Chamot-Rooke; Vicki H Wysocki
Separation and identification of structural isomers by quadrupole collision-induced dissociation-hydrogen/deuterium exchange-infrared multiphoton dissociation (QCID-HDX-IRMPD).
Journal of the American Society for Mass Spectrometry 2010;21(8):1329-38.
2010: Patricia Kiesler; Paul A Haynes; Lingfang Shi; Peter N Kao; Vicki H Wysocki; Donata Vercelli
NF45 and NF90 regulate HS4-dependent interleukin-13 transcription in T cells.
The Journal of biological chemistry 2010;285(11):8256-67.
2010: Ashley C Gucinski; Eric D Dodds; Wenzhou Li; Vicki H Wysocki
Understanding and exploiting Peptide fragment ion intensities using experimental and informatic approaches.
Methods in molecular biology (Clifton, N.J.) 2010;604():73-94.
2009: David B Briggs; Christopher M Jones; Ellene H Mashalidis; Martha Nuñez; Andrew C Hausrath; Vicki H Wysocki; Tsu-Shuen Tsao
Disulfide-dependent self-assembly of adiponectin octadecamers from trimers and presence of stable octadecameric adiponectin lacking disulfide bonds in vitro.
Biochemistry 2009;48(51):12345-57.
2009: Brittany R Perkins; Julia Chamot-Rooke; Sung Hwan Yoon; Ashley C Gucinski; Arpád Somogyi; Vicki H Wysocki
Evidence of diketopiperazine and oxazolone structures for HA b2+ ion.
Journal of the American Chemical Society 2009;131(48):17528-9.
2009: Donna Wolk; Lawrence B Blyn; Thomas A Hall; Rangarajan Sampath; Raymond Ranken; Cristina Ivy; Rachael Melton; Heather Matthews; Neill White; Feng Li; Vanessa Harpin; David J Ecker; Brandi Limbago; Linda K McDougal; Vicki H Wysocki; Mian Cai; Karen C Carroll
Pathogen profiling: rapid molecular characterization of Staphylococcus aureus by PCR/electrospray ionization-mass spectrometry and correlation with phenotype.
Journal of clinical microbiology 2009;47(10):3129-37.
2009: Erin M Johnson; Walther R Ellis; Linda S Powers; Vicki H Wysocki
Affinity capture mass spectrometry of biomarker proteins using peptide ligands from biopanning.
Analytical chemistry 2009;81(15):5999-6005.
2009: James R Joubert; Kathryn A Smith; Erin Johnson; John P Keogh; Vicki H Wysocki; Bruce K Gale; John C Conboy; S Scott Saavedra
Stable, ligand-doped, poly(bis-SorbPC) lipid bilayer arrays for protein binding and detection.
ACS applied materials & interfaces 2009;1(6):1310-5.
2009: Sung Hwan Yoon; Chaminda M Gamage; Kent J Gillig; Vicki H Wysocki
Kinetics of surface-induced dissociation of N(CH3)4(+) and N(CD3)4(+) using silicon nanoparticle assisted laser desorption/ionization and laser desorption/ionization.
Journal of the American Society for Mass Spectrometry 2009;20(6):957-64.
2009: Richard L Beardsley; Christopher M Jones; Asiri Galhena; Vicki H Wysocki
Noncovalent protein tetramers and pentamers with "n" charges yield monomers with n/4 and n/5 charges.
Analytical chemistry 2009;81(4):1347-56.
2008: Sung Hwan Yoon; Julia Chamot-Rooke; Brittany R Perkins; Amy E Hilderbrand; John C Poutsma; Vicki H Wysocki
IRMPD spectroscopy shows that AGG forms an oxazolone b2+ ion.
Journal of the American Chemical Society 2008;130(52):17644-5.
2008: Guilong Cheng; Eman Basha; Vicki H Wysocki; Elizabeth Vierling
Insights into small heat shock protein and substrate structure during chaperone action derived from hydrogen/deuterium exchange and mass spectrometry.
The Journal of biological chemistry 2008;283(39):26634-42.
2008: Vicki H Wysocki; Christopher M Jones; Asiri Galhena; Anne E Blackwell
Surface-induced dissociation shows potential to be more informative than collision-induced dissociation for structural studies of large systems.
Journal of the American Society for Mass Spectrometry 2008;19(7):903-13.
2008: Valeria Ochoa-Herrera; Reyes Sierra-Alvarez; Arpád Somogyi; Neil E Jacobsen; Vicki H Wysocki; Jim A Field
Reductive defluorination of perfluorooctane sulfonate.
Environmental science & technology 2008;42(9):3260-4.
2008: Asiri Galhena; Shai Dagan; Christopher M Jones; Richard L Beardsley; Vicki H Wysocki
Surface-induced dissociation of peptides and protein complexes in a quadrupole/time-of-flight mass spectrometer.
Analytical chemistry 2008;80(5):1425-36.
2008: Vicki H Wysocki; Karen E Joyce; Christopher M Jones; Richard L Beardsley
Surface-induced dissociation of small molecules, peptides, and non-covalent protein complexes.
Journal of the American Society for Mass Spectrometry 2008;19(2):190-208.
2008: Patricia Y Scaraffia; Guanhong Tan; Jun Isoe; Vicki H Wysocki; Michael A Wells; Roger L Miesfeld
Discovery of an alternate metabolic pathway for urea synthesis in adult Aedes aegypti mosquitoes.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(2):518-23.
2008: Yingying Huang; Chien Cheng (George) Tseng; Shinsheng Yuan; Ljiljana Pasa-Tolic; Mary S Lipton; Richard D Smith; Vicki H Wysocki
A data-mining scheme for identifying peptide structural motifs responsible for different MS/MS fragmentation intensity patterns.
Journal of proteome research 2008;7(1):70-9.
2007: James G Rohrbough; John N Galgiani; Vicki H Wysocki
The application of proteomic techniques to fungal protein identification and quantification.
Annals of the New York Academy of Sciences 2007;1111():133-46.
2007: Xiujuan Wen; Shai Dagan; Vicki H Wysocki
Small-molecule analysis with silicon-nanoparticle-assisted laser desorption/ionization mass spectrometry.
Analytical chemistry 2007;79(2):434-44.
2006: Christopher M Jones; Richard L Beardsley; Asiri Galhena; Shai Dagan; Guilong Cheng; Vicki H Wysocki
Symmetrical gas-phase dissociation of noncovalent protein complexes via surface collisions.
Journal of the American Chemical Society 2006;128(47):15044-5.
2006: Guilong Cheng; Vicki H Wysocki; Michael A Cusanovich
Local stability of Rhodobacter capsulatus cytochrome c2 probed by solution phase hydrogen/deuterium exchange and mass spectrometry.
Journal of the American Society for Mass Spectrometry 2006;17(11):1518-25.
2006: Guilong Cheng; Michael A Cusanovich; Vicki H Wysocki
Properties of the dark and signaling states of photoactive yellow protein probed by solution phase hydrogen/deuterium exchange and mass spectrometry.
Biochemistry 2006;45(39):11744-51.
2006: Patricia Y Scaraffia; Qingfen Zhang; Vicki H Wysocki; Jun Isoe; Michael A Wells
Analysis of whole body ammonia metabolism in Aedes aegypti using [15N]-labeled compounds and mass spectrometry.
Insect biochemistry and molecular biology 2006;36(8):614-22.
2006: Facundo M Fernandez; Vicki H Wysocki; Jean H Futrell; Julia Laskin
Protein identification via surface-induced dissociation in an FT-ICR mass spectrometer and a patchwork sequencing approach.
Journal of the American Society for Mass Spectrometry 2006;17(5):700-9.
2006: Lori L Smith; Kristin A Herrmann; Vicki H Wysocki
Investigation of gas phase ion structure for proline-containing b(2) ion.
Journal of the American Society for Mass Spectrometry 2006;17(1):20-8.
2005: Kristin A Herrmann; Arpád Somogyi; Vicki H Wysocki; László Drahos; Károly Vékey
Combination of sustained off-resonance irradiation and on-resonance excitation in FT-ICR.
Analytical chemistry 2005;77(23):7626-38.
2005: Yingying Huang; Joseph M Triscari; Chien Cheng (George) Tseng; Ljiljana Pasa-Tolic; Mary S Lipton; Richard D Smith; Vicki H Wysocki
Statistical characterization of the charge state and residue dependence of low-energy CID peptide dissociation patterns.
Analytical chemistry 2005;77(18):5800-13.
2005: Qingfen Zhang; Vicki H Wysocki; Patricia Y Scaraffia; Michael A Wells
Fragmentation pathway for glutamine identification: loss of 73 Da from dimethylformamidine glutamine isobutyl ester.
Journal of the American Society for Mass Spectrometry 2005;16(7):1192-203.
2005: Kristin A Herrmann; Vicki H Wysocki; Erich R Vorpagel
Computational investigation and hydrogen/deuterium exchange of the fixed charge derivative tris(2,4,6-trimethoxyphenyl) phosphonium: implications for the aspartic acid cleavage mechanism.
Journal of the American Society for Mass Spectrometry 2005;16(7):1067-80.
2005: Vicki H Wysocki; Katheryn A Resing; Qingfen Zhang; Guilong Cheng
Mass spectrometry of peptides and proteins.
Methods (San Diego, Calif.) 2005;35(3):211-22.
2004: Chaminda M Gamage; Facundo M Fernandez; Krishnamoorthy Kuppannan; Vicki H Wysocki
Submicrosecond surface-induced dissociation of peptide ions in a MALDI TOF MS.
Analytical chemistry 2004;76(17):5080-91.
2004: D T U Abeytunga; James J Glick; Nicholas J Gibson; Lynne A Oland; Arpád Somogyi; Vicki H Wysocki; Robin Polt
Presence of unsaturated sphingomyelins and changes in their composition during the life cycle of the moth Manduca sexta.
Journal of lipid research 2004;45(7):1221-31.
2004: George Tsaprailis; Hari Nair; Wenqing Zhong; Krishnamoorthy Kuppannan; Jean H Futrell; Vicki H Wysocki
A mechanistic investigation of the enhanced cleavage at histidine in the gas-phase dissociation of protonated peptides.
Analytical chemistry 2004;76(7):2083-94.
2004: Yingying Huang; Joseph M Triscari; Ljiljana Pasa-Tolic; Gordon A Anderson; Mary S Lipton; Richard D Smith; Vicki H Wysocki
Dissociation behavior of doubly-charged tryptic peptides: correlation of gas-phase cleavage abundance with ramachandran plots.
Journal of the American Chemical Society 2004;126(10):3034-5.
2004: David L Tabb; Yingying Huang; Vicki H Wysocki; John R Yates
Influence of basic residue content on fragment ion peak intensities in low-energy collision-induced dissociation spectra of peptides.
Analytical chemistry 2004;76(5):1243-8.
2003: Facundo M Fernandez; Lori L Smith; Krishnamoorthy Kuppannan; Xi Yang; Vicki H Wysocki
Peptide sequencing using a patchwork approach and surface-induced dissociation in sector-TOF and dual quadrupole mass spectrometers.
Journal of the American Society for Mass Spectrometry 2003;14(12):1387-401.
2003: Thomas Wyttenbach; Béla Paizs; Perdita E Barran; Linda Breci; Dengfeng Liu; Sándor Suhai; Vicki H Wysocki; Michael T Bowers
The effect of the initial water of hydration on the energetics, structures, and H/D exchange mechanism of a family of pentapeptides: an experimental and theoretical study.
Journal of the American Chemical Society 2003;125(45):13768-75.
2003: Linda Breci; David L Tabb; John R Yates; Vicki H Wysocki
Cleavage N-terminal to proline: analysis of a database of peptide tandem mass spectra.
Analytical chemistry 2003;75(9):1963-71.
2003: David L Tabb; Lori L Smith; Linda Breci; Vicki H Wysocki; Dayin Lin; John R Yates
Statistical characterization of ion trap tandem mass spectra from doubly charged tryptic peptides.
Analytical chemistry 2003;75(5):1155-63.
2002: Arpád Somogyi; Darrin L Smith; Vicki H Wysocki; Ramon Colorado; T Randall Lee
Neutralization of methyl cation via chemical reactions in low-energy ion-surface collisions with fluorocarbon and hydrocarbon self-assembled monolayer films.
Journal of the American Society for Mass Spectrometry 2002;13(10):1151-61.
2000: Vicki H Wysocki; George Tsaprailis; Lori L Smith; Linda Breci
Mobile and localized protons: a framework for understanding peptide dissociation.
Journal of mass spectrometry : JMS 2000;35(12):1399-406.
2000: C Gu; George Tsaprailis; Linda Breci; Vicki H Wysocki
Selective gas-phase cleavage at the peptide bond C-terminal to aspartic acid in fixed-charge derivatives of Asp-containing peptides.
Analytical chemistry 2000;72(23):5804-13.
1997: W Zhong; E N Nikolaev; J H Futrell; Vicki H Wysocki
Tandem fourier transform mass spectrometry studies of surface-induced dissociation of benzene monomer and dimer ions on a self-assembled fluorinated alkanethiolate monolayer surface.
Analytical chemistry 1997;69(13):2496-503.