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Yoshiharu Yamamoto

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Oligonucleotide Array Sequence Analysis

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Kyonoshin Maruyama; Satoko Matsukura; Junya Mizoi; Hitoshi Sakakibara; Tetsuya Sakurai; Kazuo Shinozaki; Hironori Takasaki; Daisuke Todaka; Satoshi Kidokoro; Mikiko Kojima; Yoshiharu Y Yamamoto; Takuya Yoshida; Kyouko Yoshiwara; Kazuko Yamaguchi-Shinozaki
Identification of cis-acting promoter elements in cold- and dehydration-induced transcriptional pathways in Arabidopsis, rice, and soybean.
Yoshiharu Y Yamamoto; Yohei Yoshioka; Mitsuro Hyakumachi; Junichi Obokata
Characteristics of core promoter types with respect to gene structure and expression in Arabidopsis thaliana.
Yasushi Yukawa; Giorgio Dieci; Mircko Alzapiedi; Asako Hiraga; Katsuaki Hirai; Yoshiharu Y Yamamoto; Masahiro Sugiura
A common sequence motif involved in selection of transcription start sites of Arabidopsis and budding yeast tRNA genes.

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All Publications

2012: Kyonoshin Maruyama; Satoko Matsukura; Junya Mizoi; Hitoshi Sakakibara; Tetsuya Sakurai; Kazuo Shinozaki; Hironori Takasaki; Daisuke Todaka; Satoshi Kidokoro; Mikiko Kojima; Yoshiharu Y Yamamoto; Takuya Yoshida; Kyouko Yoshiwara; Kazuko Yamaguchi-Shinozaki
Identification of cis-acting promoter elements in cold- and dehydration-induced transcriptional pathways in Arabidopsis, rice, and soybean.
DNA research : an international journal for rapid publication of reports on genes and genomes 2012;19(1):37-49.
2011: Yoshiharu Y Yamamoto; Yohei Yoshioka; Mitsuro Hyakumachi; Junichi Obokata
Characteristics of core promoter types with respect to gene structure and expression in Arabidopsis thaliana.
DNA research : an international journal for rapid publication of reports on genes and genomes 2011;18(5):333-42.
2011: Yasushi Yukawa; Giorgio Dieci; Mircko Alzapiedi; Asako Hiraga; Katsuaki Hirai; Yoshiharu Y Yamamoto; Masahiro Sugiura
A common sequence motif involved in selection of transcription start sites of Arabidopsis and budding yeast tRNA genes.
Genomics 2011;97(3):166-72.
2011: Yoshiharu Y Yamamoto; Yohei Yoshioka; Mitsuro Hyakumachi; Kyonoshin Maruyama; Kazuko Yamaguchi-Shinozaki; Mutsutomo Tokizawa; Hiroyuki Koyama
Prediction of transcriptional regulatory elements for plant hormone responses based on microarray data.
BMC plant biology 2011;11():39.
2010: E Hiyama; M Kamimura; Yoshiharu Y Yamamoto; T Motoba
Five-body cluster structure of the double-Λ hypernucleus (ΛΛ)(11)Be.
Physical review letters 2010;104(21):212502.
2009: Yoshiharu Y Yamamoto; Tomoaki Yoshitsugu; Tetsuya Sakurai; Motoaki Seki; Kazuo Shinozaki; Junichi Obokata
Heterogeneity of Arabidopsis core promoters revealed by high-density TSS analysis.
The Plant journal : for cell and molecular biology 2009;60(2):350-62.
2009: Makoto T Fujiwara; Kohsuke Sekine; Yoshiharu Y Yamamoto; Tomoko Abe; Naoki Sato; Ryuuichi D Itoh
Live imaging of chloroplast FtsZ1 filaments, rings, spirals, and motile dot structures in the AtMinE1 mutant and overexpressor of Arabidopsis thaliana.
Plant & cell physiology 2009;50(6):1116-26.
2008: Peter Brodersen; Lali Sakvarelidze-Achard; Marianne Bruun-Rasmussen; Patrice Dunoyer; Yoshiharu Y Yamamoto; Leslie Sieburth; Olivier Voinnet
Widespread translational inhibition by plant miRNAs and siRNAs.
Science (New York, N.Y.) 2008;320(5880):1185-90.
2008: Yoshiharu Y Yamamoto; Junichi Obokata
ppdb: a plant promoter database.
Nucleic acids research 2008;36(Database issue):D977-81.
2007: Yoshiharu Y Yamamoto; Hiroyuki Ichida; Tomoko Abe; Yutaka Suzuki; Sumio Sugano; Junichi Obokata
Differentiation of core promoter architecture between plants and mammals revealed by LDSS analysis.
Nucleic acids research 2007;35(18):6219-26.
2007: Yoshiharu Y Yamamoto; Hiroyuki Ichida; Minami Matsui; Junichi Obokata; Tetsuya Sakurai; Masakazu Satou; Motoaki Seki; Kazuo Shinozaki; Tomoko Abe
Identification of plant promoter constituents by analysis of local distribution of short sequences.
BMC genomics 2007;8():67.
2006: Takeshi Yoshizumi; Yuko Tsumoto; Tomoko Takiguchi; Noriko Nagata; Yoshiharu Y Yamamoto; Mika Kawashima; Takanari Ichikawa; Miki Nakazawa; Naoki Yamamoto; Minami Matsui
Increased level of polyploidy1, a conserved repressor of CYCLINA2 transcription, controls endoreduplication in Arabidopsis.
The Plant cell 2006;18(10):2452-68.
2003: Tatsuru Masuda; Naoki Fusada; Naoki Oosawa; Ken'ichi Takamatsu; Yoshiharu Y Yamamoto; Masa-aki Ohto; Kenzo Nakamura; Koji Goto; Daisuke Shibata; Yumiko Shirano; Hiroaki Hayashi; Tomohiko Kato; Satoshi Tabata; Hiroshi Shimada; Hiroyuki Ohta; Ken-ichiro Takamiya
Functional analysis of isoforms of NADPH: protochlorophyllide oxidoreductase (POR), PORB and PORC, in Arabidopsis thaliana.
Plant & cell physiology 2003;44(10):963-74.
2003: Yoshiharu Y Yamamoto; Yumi Tsuhara; Kazuhito Gohda; Kumiko Suzuki; Minami Matsui
Gene trapping of the Arabidopsis genome with a firefly luciferase reporter.
The Plant journal : for cell and molecular biology 2003;35(2):273-83.
2003: Mitsuhiro Kimura; Katsushi Manabe; Tomoko Abe; Shigeo Yoshida; Minami Matsui; Yoshiharu Y Yamamoto
Analysis of hydrogen peroxide-independent expression of the high-light-inducible ELIP2 gene with the aid of the ELIP2 promoter-luciferase fusions.
Photochemistry and photobiology 2003;77(6):668-74.
2003: Mitsuhiro Kimura; Yoshiharu Y Yamamoto; Motoaki Seki; Tetsuya Sakurai; Masakazu Sato; Tomoko Abe; Shigeo Yoshida; Katsushi Manabe; Kazuo Shinozaki; Minami Matsui
Identification of Arabidopsis genes regulated by high light-stress using cDNA microarray.
Photochemistry and photobiology 2003;77(2):226-33.
2002: Irena Sherameti; Masayaki Nakamura; Yoshiharu Y Yamamoto; Thomas Pfannschmidt; Junichi Obokata; Ralf Oelmüller
Polyribosome loading of spinach mRNAs for photosystem I subunits is controlled by photosynthetic electron transport.
The Plant journal : for cell and molecular biology 2002;32(5):631-9.
2001: Yoshiharu Y Yamamoto; X Deng; Minami Matsui
Cip4, a new COP1 target, is a nucleus-localized positive regulator of Arabidopsis photomorphogenesis.
The Plant cell 2001;13(2):399-411.
2001: Miki Nakazawa; Naoto Yabe; Takanari Ichikawa; Yoshiharu Y Yamamoto; T Yoshizumi; Kohji Hasunuma; Minami Matsui
DFL1, an auxin-responsive GH3 gene homologue, negatively regulates shoot cell elongation and lateral root formation, and positively regulates the light response of hypocotyl length.
The Plant journal : for cell and molecular biology 2001;25(2):213-21.
1990: Takafumi Tezuka; Yoshiharu Y Yamamoto; N Kondo
Activation of O(2) Uptake and NAD-Specific Isocitrate Dehydrogenase in Mitochondria Isolated from Cotyledons of Castor Bean by cis, trans-Abscisic Acid.
Plant physiology 1990;92(1):147-50.
1979: H Sasakawa; Yoshiharu Y Yamamoto
Effects of red, far red, and blue light on enhancement of nitrate reductase activity and on nitrate uptake in etiolated rice seedlings.
Plant physiology 1979;63(6):1098-101.
1978: H Sasakawa; Yoshiharu Y Yamamoto
Comparison of the uptake of nitrate and ammonium by rice seedlings: influences of light, temperature, oxygen concentration, exogenous sucrose, and metabolic inhibitors.
Plant physiology 1978;62(4):665-9.
1975: Takafumi Tezuka; Yoshiharu Y Yamamoto
Photoactivation of NAD Kinase through Phytochrome: Phosphate Donors and Cofactors.
Plant physiology 1975;56(6):728-30.
1972: Takafumi Tezuka; Yoshiharu Y Yamamoto
Photoregulation of Nicotinamide Adenine Dinucleotide Kinase Activity in Cell-free Extracts.
Plant physiology 1972;50(4):458-62.
1969: Yoshiharu Y Yamamoto
Modification of metabolic pattern by variation of nicotinamide adenine dinucleotide phosphate level.
Plant physiology 1969;44(3):407-12.
1966: Yoshiharu Y Yamamoto
NAD Kinase in Higher Plants.
Plant physiology 1966;41(3):523-8.
1966: Yoshiharu Y Yamamoto
Variation of nicotinamide adenine dinucleotide phosphate level in bean hypocotyls in relation to o(2) concentration.
Plant physiology 1966;41(3):519-22.