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Ryan Brinkman

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Publications

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Josef Spidlen; Karin Breuer; Nikesh Kotecha; Chad Rosenberg; Ryan R Brinkman
FlowRepository: a resource of annotated flow cytometry datasets associated with peer-reviewed publications.
Claudia Benz; Ryan R Brinkman; Michael R Copley; Adrian Cortes; Christopher Day; David Kent; Elaine Ma; Heidi Mader; Keegan Rowe; David Treloar; Stefan Wohrer; Nima Aghaeepour; Connie J Eaves
Hematopoietic stem cell subtypes expand differentially during development and display distinct lymphopoietic programs.
Josef Spidlen; Parisa Shooshtari; Tobias R Kollmann; Ryan R Brinkman
Flow cytometry data standards.

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All Publications

2012: Josef Spidlen; Karin Breuer; Nikesh Kotecha; Chad Rosenberg; Ryan R Brinkman
FlowRepository: a resource of annotated flow cytometry datasets associated with peer-reviewed publications.
Cytometry. Part A : the journal of the International Society for Analytical Cytology 2012;81(9):727-31.
2012: Claudia Benz; Ryan R Brinkman; Michael R Copley; Adrian Cortes; Christopher Day; David Kent; Elaine Ma; Heidi Mader; Keegan Rowe; David Treloar; Stefan Wohrer; Nima Aghaeepour; Connie J Eaves
Hematopoietic stem cell subtypes expand differentially during development and display distinct lymphopoietic programs.
Cell stem cell 2012;10(3):273-83.
2011: Josef Spidlen; Parisa Shooshtari; Tobias R Kollmann; Ryan R Brinkman
Flow cytometry data standards.
BMC research notes 2011;4():50.
2010: Xiaoyan Jiang; Donna Forrest; Frank Nicolini; Ali Turhan; Joelle Guilhot; Calvin Yip; Tessa L Holyoake; Heather Jorgensen; K Lambie; Kyi Min Saw; Emily Pang; Ranko Vukovic; Paeta Lehn; Ashley Ringrose; Miao Yu; Ryan R Brinkman; Clay Smith; Allen Eaves; Connie Eaves
Properties of CD34+ CML stem/progenitor cells that correlate with different clinical responses to imatinib mesylate.
Blood 2010;116(12):2112-21.
2010: Parisa Shooshtari; Edgardo S Fortuno; Darren Blimkie; Miao Yu; Arvind Gupta; Tobias R Kollmann; Ryan R Brinkman
Correlation analysis of intracellular and secreted cytokines via the generalized integrated mean fluorescence intensity.
Cytometry. Part A : the journal of the International Society for Analytical Cytology 2010;77(9):873-80.
2010: Florian Hahne; Alireza Hadj Khodabakhshi; Ali Bashashati; Chao-Jen Wong; Randy D Gascoyne; Andrew P Weng; Vicky Seyfert-Margolis; Katarzyna Bourcier; Adam Asare; Thomas Lumley; Robert Gentleman; Ryan R Brinkman
Per-channel basis normalization methods for flow cytometry data.
Cytometry. Part A : the journal of the International Society for Analytical Cytology 2010;77(2):121-31.
2009: Ali Bashashati; Ryan R Brinkman
A survey of flow cytometry data analysis methods.
Advances in bioinformatics 2009;():584603.
2007: Ryan R Brinkman; Maura Gasparetto; Shang-Jung Jessica Lee; Albert J Ribickas; Janelle Perkins; William Janssen; Renee Smiley; Clay Smith
High-content flow cytometry and temporal data analysis for defining a cellular signature of graft-versus-host disease.
Biology of blood and marrow transplantation : journal of the American Society for Blood and Marrow Transplantation 2007;13(6):691-700.
2007: Nolwenn Le Meur; Anthony Rossini; Maura Gasparetto; Clay Smith; Ryan R Brinkman; Robert Gentleman
Data quality assessment of ungated flow cytometry data in high throughput experiments.
Cytometry. Part A : the journal of the International Society for Analytical Cytology 2007;71(6):393-403.
2006: Josef Spidlen; Robert C Gentleman; Perry D Haaland; Morgan Langille; Nolwenn Le Meur; Michael Ochs; Charles Schmitt; Clayton A Smith; Adam S Treister; Ryan R Brinkman
Data standards for flow cytometry.
Omics : a journal of integrative biology 2006;10(2):209-14.