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Soojin Yi

Research Profile

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Chemicals & Drugs

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Physiology

Genes & Molecular Sequences

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Sequence Analysis, DNA

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Publications

TOP 3
Soojin V Yi
Morris Goodman's hominoid rate slowdown: the importance of being neutral.
Iksoo Huh; Taesung Park; Jia Zeng; Soojin V Yi
DNA methylation and transcriptional noise.
Brendan G Hunt; Soojin V Yi; Karl M Glastad; Michael A D Goodisman
Patterning and regulatory associations of DNA methylation are mirrored by histone modifications in insects.

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All Publications

2013: Soojin V Yi
Morris Goodman's hominoid rate slowdown: the importance of being neutral.
Molecular phylogenetics and evolution 2013;66(2):569-74.
2013: Iksoo Huh; Taesung Park; Jia Zeng; Soojin V Yi
DNA methylation and transcriptional noise.
Epigenetics & chromatin 2013;6(1):9.
2013: Brendan G Hunt; Soojin V Yi; Karl M Glastad; Michael A D Goodisman
Patterning and regulatory associations of DNA methylation are mirrored by histone modifications in insects.
Genome biology and evolution 2013;5(3):591-8.
2012: Jia Zeng; Dan Geschwind; Brendan G Hunt; Genevieve Konopka; Todd M Preuss; Soojin V Yi
Divergent whole-genome methylation maps of human and chimpanzee brains reveal epigenetic basis of human regulatory evolution.
American journal of human genetics 2012;91(3):455-65.
2012: Natalie M Jameson; Ke Xu; Soojin V Yi; Derek E Wildman
Development and annotation of shotgun sequence libraries from New World monkeys.
Molecular ecology resources 2012;12(5):950-5.
2012: Shrutii Sarda; Brendan G Hunt; Jia Zeng; Soojin V Yi
The evolution of invertebrate gene body methylation.
Molecular biology and evolution 2012;29(8):1907-16.
2012: Ke Xu; Sohee Oh; Taesung Park; Daven C Presgraves; Soojin V Yi
Lineage-specific variation in slow- and fast-X evolution in primates.
Evolution; international journal of organic evolution 2012;66(6):1751-61.
2012: Daudi Jjingo; Victoria Lunyak; Soojin V Yi; Andrew B Conley; I King Jordan
On the presence and role of human gene-body DNA methylation.
Oncotarget 2012;3(4):462-74.
2011: Jungsun Park; Taesung Park; Zuogang Peng; John H Werren; Dave Wheeler; Navin Elango; Jia Zeng; Soojin V Yi
Comparative analyses of DNA methylation and sequence evolution using Nasonia genomes.
Molecular biology and evolution 2011;28(12):3345-54.
2011: K M Glastad; Brendan G Hunt; Soojin V Yi; Michael A D Goodisman
DNA methylation in insects: on the brink of the epigenomic era.
Insect molecular biology 2011;20(5):553-65.
2011: Brendan G Hunt; Laurent Keller; Lino Ometto; DeWayne Shoemaker; Yannick Wurm; Soojin V Yi; Michael A D Goodisman
Relaxed selection is a precursor to the evolution of phenotypic plasticity.
Proceedings of the National Academy of Sciences of the United States of America 2011;108(38):15936-41.
2011: Ke Xu; Ivona Bezakova; Leonid Bunimovich; Soojin V Yi
Path lengths in protein-protein interaction networks and biological complexity.
Proteomics 2011;11(10):1857-67.
2011: Navin Elango; Soojin V Yi
Functional relevance of CpG island length for regulation of gene expression.
Genetics 2011;187(4):1077-83.
2011: Yong-Hwee E Loh; Soojin V Yi; J Todd Streelman
Evolution of microRNAs and the diversification of species.
Genome biology and evolution 2011;3():55-65.
2010: Brendan G Hunt; Stefan Wyder; Navin Elango; John H Werren; Evgeny M Zdobnov; Soojin V Yi; Michael A D Goodisman
Sociality is linked to rates of protein evolution in a highly social insect.
Molecular biology and evolution 2010;27(3):497-500.
2010: Jia Zeng; Soojin V Yi
DNA methylation and genome evolution in honeybee: gene length, expression, functional enrichment covary with the evolutionary signature of DNA methylation.
Genome biology and evolution 2010;2():770-80.
2010: Brendan G Hunt; Jennifer A Brisson; Soojin V Yi; Michael A D Goodisman
Functional conservation of DNA methylation in the pea aphid and the honeybee.
Genome biology and evolution 2010;2():719-28.
2009: Derek E Wildman; Natalie M Jameson; Juan C Opazo; Soojin V Yi
A fully resolved genus level phylogeny of neotropical primates (Platyrrhini).
Molecular phylogenetics and evolution 2009;53(3):694-702.
2009: Soojin V Yi; Michael A D Goodisman
Computational approaches for understanding the evolution of DNA methylation in animals.
Epigenetics : official journal of the DNA Methylation Society 2009;4(8):551-6.
2009: Daven C Presgraves; Soojin V Yi
Doubts about complex speciation between humans and chimpanzees.
Trends in ecology & evolution 2009;24(10):533-40.
2009: Navin Elango; Brendan G Hunt; Michael A D Goodisman; Soojin V Yi
DNA methylation is widespread and associated with differential gene expression in castes of the honeybee, Apis mellifera.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(27):11206-11.
2009: Navin Elango; Jeeyoung Lee; Zuogang Peng; Yong-Hwee E Loh; Soojin V Yi
Evolutionary rate variation in Old World monkeys.
Biology letters 2009;5(3):405-8.
2009: Tracy H Hazen; K Danielle Kennedy; Shen Chen; Soojin V Yi; Patricia A Sobecky
Inactivation of mismatch repair increases the diversity of Vibrio parahaemolyticus.
Environmental microbiology 2009;11(5):1254-66.
2009: Zuogang Peng; Navin Elango; Derek E Wildman; Soojin V Yi
Primate phylogenomics: developing numerous nuclear non-coding, non-repetitive markers for ecological and phylogenetic applications and analysis of evolutionary rate variation.
BMC genomics 2009;10():247.
2008: Navin Elango; Soojin V Yi
DNA methylation and structural and functional bimodality of vertebrate promoters.
Molecular biology and evolution 2008;25(8):1602-8.
2008: Seong-Ho Kim; Soojin V Yi
Mammalian nonsynonymous sites are not overdispersed: comparative genomic analysis of index of dispersion of mammalian proteins.
Molecular biology and evolution 2008;25(4):634-42.
2008: Navin Elango; Seong-Ho Kim; Eric Vigoda; Soojin V Yi
Mutations of different molecular origins exhibit contrasting patterns of regional substitution rate variation.
PLoS computational biology 2008;4(2):e1000015.
2008: Yong-Hwee E Loh; Lee S Katz; Meryl C Mims; Thomas David Kocher; Soojin V Yi; J Todd Streelman
Comparative analysis reveals signatures of differentiation amid genomic polymorphism in Lake Malawi cichlids.
Genome biology 2008;9(7):R113.
2008: Charles D Warden; Seong-Ho Kim; Soojin V Yi
Predicted functional RNAs within coding regions constrain evolutionary rates of yeast proteins.
PloS one 2008;3(2):e1559.
2007: Seong-Ho Kim; Soojin V Yi
Understanding relationship between sequence and functional evolution in yeast proteins.
Genetica 2007;131(2):151-6.
2006: Seong-Ho Kim; Navin Elango; Charles Warden; Eric Vigoda; Soojin V Yi
Heterogeneous genomic molecular clocks in primates.
PLoS genetics 2006;2(10):e163.
2006: Soojin V Yi
Non-adaptive evolution of genome complexity.
BioEssays : news and reviews in molecular, cellular and developmental biology 2006;28(10):979-82.
2006: Seong-Ho Kim; Soojin V Yi
Correlated asymmetry of sequence and functional divergence between duplicate proteins of Saccharomyces cerevisiae.
Molecular biology and evolution 2006;23(5):1068-75.
2006: Navin Elango; James W Thomas; Soojin V Yi
Variable molecular clocks in hominoids.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(5):1370-5.