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Lu Yu

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Publications

TOP 3
James C Wright; Lu Yu; Markus Brosch; Mark Collins; Lukas Käll; Jyoti S Choudhary
Enhanced peptide identification by electron transfer dissociation using an improved Mascot Percolator.
Catherine H Wilson; Douglas J Winton; Lu Yu; Mark J Arends; Jyoti Choudhary; Catriona Crombie; Andrew G Fraser; Tannia Gracia; H Nikki March; Rebecca E McIntyre; Mercedes Pardo; Gino B Poulin; George Poulogiannis; Alistair G Rust; Louise van der Weyden; David J Adams
Nuclear receptor binding protein 1 regulates intestinal progenitor cell homeostasis and tumour formation.
Markus Brosch; Gary I Saunders; Adam Frankish; Mark Collins; Lu Yu; James Wright; Ruth Verstraten; David J Adams; Jennifer Harrow; Jyoti S Choudhary; Tim Hubbard
Shotgun proteomics aids discovery of novel protein-coding genes, alternative splicing, and "resurrected" pseudogenes in the mouse genome.

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All Publications

2012: James C Wright; Lu Yu; Markus Brosch; Mark Collins; Lukas Käll; Jyoti S Choudhary
Enhanced peptide identification by electron transfer dissociation using an improved Mascot Percolator.
Molecular & cellular proteomics : MCP 2012;11(8):478-91.
2012: Catherine H Wilson; Douglas J Winton; Lu Yu; Mark J Arends; Jyoti Choudhary; Catriona Crombie; Andrew G Fraser; Tannia Gracia; H Nikki March; Rebecca E McIntyre; Mercedes Pardo; Gino B Poulin; George Poulogiannis; Alistair G Rust; Louise van der Weyden; David J Adams
Nuclear receptor binding protein 1 regulates intestinal progenitor cell homeostasis and tumour formation.
The EMBO journal 2012;31(11):2486-97.
2011: Markus Brosch; Gary I Saunders; Adam Frankish; Mark Collins; Lu Yu; James Wright; Ruth Verstraten; David J Adams; Jennifer Harrow; Jyoti S Choudhary; Tim Hubbard
Shotgun proteomics aids discovery of novel protein-coding genes, alternative splicing, and "resurrected" pseudogenes in the mouse genome.
Genome research 2011;21(5):756-67.
2011: Nicola K Petty; Theresa Feltwell; Derek Pickard; Simon Clare; Ana Toribio; Maria Fookes; Kevin Roberts; Rita Monson; Satheesh Nair; Robert Kingsley; Richard Bulgin; Siouxsie Wiles; David Goulding; Thomas Keane; Craig Corton; Nicola Lennard; David Harris; David Willey; Richard Rance; Lu Yu; Jyoti S Choudhary; Carol Churcher; Michael A Quail; Julian Parkhill; Gad Frankel; Gordon Dougan; George P C Salmond; Nicholas R Thomson
Citrobacter rodentium is an unstable pathogen showing evidence of significant genomic flux.
PLoS pathogens 2011;7(4):e1002018.
2010: Derek Pickard; Ana Toribio; Nicola K Petty; Andries van Tonder; Lu Yu; David Goulding; Bart Barrell; Richard Rance; David Harris; Michael Wetter; John Wain; Jyoti Choudhary; Nicholas Thomson; Gordon Dougan
A conserved acetyl esterase domain targets diverse bacteriophages to the Vi capsular receptor of Salmonella enterica serovar Typhi.
Journal of bacteriology 2010;192(21):5746-54.
2010: Mercedes Pardo; Benjamin Lang; Lu Yu; Haydn Prosser; Allan Bradley; M Madan Babu; Jyoti Choudhary
An expanded Oct4 interaction network: implications for stem cell biology, development, and disease.
Cell stem cell 2010;6(4):382-95.
2009: Trevor D Lawley; Nicholas J Croucher; Lu Yu; Simon Clare; Mohammed Sebaihia; David Goulding; Derek Pickard; Julian Parkhill; Jyoti Choudhary; Gordon Dougan
Proteomic and genomic characterization of highly infectious Clostridium difficile 630 spores.
Journal of bacteriology 2009;191(17):5377-86.
2009: Timothy T Perkins; Robert Kingsley; Maria C Fookes; Paul P Gardner; Keith D James; Lu Yu; Samuel A Assefa; Miao He; Nicholas J Croucher; Derek Pickard; Duncan J Maskell; Julian Parkhill; Jyoti Choudhary; Nicholas R Thomson; Gordon Dougan
A strand-specific RNA-Seq analysis of the transcriptome of the typhoid bacillus Salmonella typhi.
PLoS genetics 2009;5(7):e1000569.
2009: Markus Brosch; Lu Yu; Tim Hubbard; Jyoti S Choudhary
Accurate and sensitive peptide identification with Mascot Percolator.
Journal of proteome research 2009;8(6):3176-81.
2008: Mark Collins; Lu Yu; Iain Campuzano; Seth G N Grant; Jyoti S Choudhary
Phosphoproteomic analysis of the mouse brain cytosol reveals a predominance of protein phosphorylation in regions of intrinsic sequence disorder.
Molecular & cellular proteomics : MCP 2008;7(7):1331-48.
2007: Mark Collins; Lu Yu; Jyoti S Choudhary
Analysis of protein phosphorylation on a proteome-scale.
Proteomics 2007;7(16):2751-68.
2006: Mark Collins; Holger Husi; Lu Yu; Julia M Brandon; Chris N G Anderson; Walter P Blackstock; Jyoti S Choudhary; Seth G N Grant
Molecular characterization and comparison of the components and multiprotein complexes in the postsynaptic proteome.
Journal of neurochemistry 2006;97 Suppl 1():16-23.
2005: Mark Collins; Lu Yu; Holger Husi; Walter P Blackstock; Jyoti S Choudhary; Seth G N Grant
Robust enrichment of phosphorylated species in complex mixtures by sequential protein and peptide metal-affinity chromatography and analysis by tandem mass spectrometry.
Science's STKE : signal transduction knowledge environment 2005;2005(298):pl6.
2005: Mark Collins; Lu Yu; Marcelo P Coba; Holger Husi; Iain Campuzano; Walter P Blackstock; Jyoti S Choudhary; Seth G N Grant
Proteomic analysis of in vivo phosphorylated synaptic proteins.
The Journal of biological chemistry 2005;280(7):5972-82.