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Barbara Brodsky

Research Profile

Chemicals & Drugs

Genes & Molecular Sequences

Amino Acid Sequences

Concepts & Ideas

Phenomena

Physiology

Occupations

Thermodynamics

Disorders

Osteogenesis Imperfecta

Procedures

Co-author Network

Publications

TOP 3
Bo An; Barbara Brodsky; Teresa M DesRochers; Guokui Qin; Geetha Thiagarajan; Xiaoxia Xia; David L Kaplan
The influence of specific binding of collagen-silk chimeras to silk biomaterials on hMSC behavior.
Avanish S Parmar; Ana Monica Nunes; Jean Baum; Barbara Brodsky
A peptide study of the relationship between the collagen triple-helix and amyloid.
Jianxi Xiao; Barbara Brodsky; Yingjie Li; Balaraman Madhan; Jean Baum
Osteogenesis imperfecta model peptides: incorporation of residues replacing Gly within a triple helix achieved by renucleation and local flexibility.

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All Publications

2013: Bo An; Barbara Brodsky; Teresa M DesRochers; Guokui Qin; Geetha Thiagarajan; Xiaoxia Xia; David L Kaplan
The influence of specific binding of collagen-silk chimeras to silk biomaterials on hMSC behavior.
Biomaterials 2013;34(2):402-12.
2012: Avanish S Parmar; Ana Monica Nunes; Jean Baum; Barbara Brodsky
A peptide study of the relationship between the collagen triple-helix and amyloid.
Biopolymers 2012;97(10):795-806.
2011: Jianxi Xiao; Barbara Brodsky; Yingjie Li; Balaraman Madhan; Jean Baum
Osteogenesis imperfecta model peptides: incorporation of residues replacing Gly within a triple helix achieved by renucleation and local flexibility.
Biophysical journal 2011;101(2):449-58.
2011: Ayumi Yoshizumi; Jordan M Fletcher; Zhuoxin Yu; Anton V Persikov; Gail J Bartlett; Aimee L Boyle; Thomas L Vincent; Derek N Woolfson; Barbara Brodsky
Designed coiled coils promote folding of a recombinant bacterial collagen.
The Journal of biological chemistry 2011;286(20):17512-20.
2011: Haiming Cheng; Shayan Rashid; Zhuoxin Yu; Ayumi Yoshizumi; Eileen Hwang; Barbara Brodsky
Location of glycine mutations within a bacterial collagen protein affects degree of disruption of triple-helix folding and conformation.
The Journal of biological chemistry 2011;286(3):2041-6.
2011: Michael A Bryan; Haiming Cheng; Barbara Brodsky
Sequence environment of mutation affects stability and folding in collagen model peptides of osteogenesis imperfecta.
Biopolymers 2011;96(1):4-13.
2010: Eileen S Hwang; Geetha Thiagarajan; Avanish S Parmar; Barbara Brodsky
Interruptions in the collagen repeating tripeptide pattern can promote supramolecular association.
Protein science : a publication of the Protein Society 2010;19(5):1053-64.
2010: Zhuoxin Yu; Oleg Mirochnitchenko; Chunying Xu; Ayumi Yoshizumi; Barbara Brodsky; Masayori Inouye
Noncollagenous region of the streptococcal collagen-like protein is a trimerization domain that supports refolding of adjacent homologous and heterologous collagenous domains.
Protein science : a publication of the Protein Society 2010;19(4):775-85.
2010: Chunying Xu; Zhuoxin Yu; Masayori Inouye; Barbara Brodsky; Oleg Mirochnitchenko
Expanding the family of collagen proteins: recombinant bacterial collagens of varying composition form triple-helices of similar stability.
Biomacromolecules 2010;11(2):348-56.
2009: Karunakar Kar; Sajjad Ibrar; Vikas Nanda; Todd M Getz; Satya P Kunapuli; Barbara Brodsky
Aromatic interactions promote self-association of collagen triple-helical peptides to higher-order structures.
Biochemistry 2009;48(33):7959-68.
2009: Yingjie Li; Barbara Brodsky; Jean Baum
NMR conformational and dynamic consequences of a gly to ser substitution in an osteogenesis imperfecta collagen model peptide.
The Journal of biological chemistry 2009;284(31):20660-7.
2009: Ayumi Yoshizumi; Zhuoxin Yu; Teresita Silva; Geetha Thiagarajan; John A M Ramshaw; Masayori Inouye; Barbara Brodsky
Self-association of streptococcus pyogenes collagen-like constructs into higher order structures.
Protein science : a publication of the Protein Society 2009;18(6):1241-51.
2008: Balaraman Madhan; Jianxi Xiao; Geetha Thiagarajan; Jean Baum; Barbara Brodsky
NMR monitoring of chain-specific stability in heterotrimeric collagen peptides.
Journal of the American Chemical Society 2008;130(41):13520-1.
2008: Karunakar Kar; Yuh-Hwa Wang; Barbara Brodsky
Sequence dependence of kinetics and morphology of collagen model peptide self-assembly into higher order structures.
Protein science : a publication of the Protein Society 2008;17(6):1086-95.
2008: Dale L Bodian; Balaraman Madhan; Barbara Brodsky; Teri E Klein
Predicting the clinical lethality of osteogenesis imperfecta from collagen glycine mutations.
Biochemistry 2008;47(19):5424-32.
2008: Barbara Brodsky; Geetha Thiagarajan; Balaraman Madhan; Karunakar Kar
Triple-helical peptides: an approach to collagen conformation, stability, and self-association.
Biopolymers 2008;89(5):345-53.
2008: Geetha Thiagarajan; Yingjie Li; Angela Mohs; Christopher Strafaci; Magdalena Popiel; Jean Baum; Barbara Brodsky
Common interruptions in the repeating tripeptide sequence of non-fibrillar collagens: sequence analysis and structural studies on triple-helix peptide models.
Journal of molecular biology 2008;376(3):736-48.
2007: Angela Mohs; Teresita Silva; Takeshi Yoshida; Ravish Amin; Slawomir Lukomski; Masayori Inouye; Barbara Brodsky
Mechanism of stabilization of a bacterial collagen triple helix in the absence of hydroxyproline.
The Journal of biological chemistry 2007;282(41):29757-65.
2007: Yingjie Li; Barbara Brodsky; Jean Baum
NMR shows hydrophobic interactions replace glycine packing in the triple helix at a natural break in the (Gly-X-Y)n repeat.
The Journal of biological chemistry 2007;282(31):22699-706.
2007: Michael A Bryan; Joseph W Brauner; Gloria Anderle; Carol R Flach; Barbara Brodsky; Richard Mendelsohn
FTIR studies of collagen model peptides: complementary experimental and simulation approaches to conformation and unfolding.
Journal of the American Chemical Society 2007;129(25):7877-84.
2006: Timothy J Hyde; Michael A Bryan; Barbara Brodsky; Jean Baum
Sequence dependence of renucleation after a Gly mutation in model collagen peptides.
The Journal of biological chemistry 2006;281(48):36937-43.
2006: Karunakar Kar; Priyal Amin; Michael A Bryan; Anton V Persikov; Angela Mohs; Yuh-Hwa Wang; Barbara Brodsky
Self-association of collagen triple helic peptides into higher order structures.
The Journal of biological chemistry 2006;281(44):33283-90.
2006: Jordi Bella; Jingsong Liu; Rachel Kramer; Barbara Brodsky; Helen M Berman
Conformational effects of Gly-X-Gly interruptions in the collagen triple helix.
Journal of molecular biology 2006;362(2):298-311.
2006: Angela Mohs; Magdalena Popiel; Yingjie Li; Jean Baum; Barbara Brodsky
Conformational features of a natural break in the type IV collagen Gly-X-Y repeat.
The Journal of biological chemistry 2006;281(25):17197-202.
2005: Teresita Silva; Alan Kirkpatrick; Barbara Brodsky; John A M Ramshaw
Effect of deamidation on stability for the collagen to gelatin transition.
Journal of agricultural and food chemistry 2005;53(20):7802-6.
2005: Yingjie Li; Seho Kim; Barbara Brodsky; Jean Baum
Identification of partially disordered peptide intermediates through residue-specific NMR diffusion measurements.
Journal of the American Chemical Society 2005;127(30):10490-1.
2005: Anton V Persikov; John A M Ramshaw; Barbara Brodsky
Prediction of collagen stability from amino acid sequence.
The Journal of biological chemistry 2005;280(19):19343-9.
2005: Angela Mohs; Yingjie Li; Ellen W Doss-Pepe; Jean Baum; Barbara Brodsky
Stability junction at a common mutation site in the collagenous domain of the mannose binding lectin.
Biochemistry 2005;44(6):1793-9.
2005: Anton V Persikov; John A M Ramshaw; Alan Kirkpatrick; Barbara Brodsky
Electrostatic interactions involving lysine make major contributions to collagen triple-helix stability.
Biochemistry 2005;44(5):1414-22.
2005: Barbara Brodsky; Anton V Persikov
Molecular structure of the collagen triple helix.
Advances in protein chemistry 2005;70():301-39.
2004: Alexei V Buevich; Teresita Silva; Barbara Brodsky; Jean Baum
Transformation of the mechanism of triple-helix peptide folding in the absence of a C-terminal nucleation domain and its implications for mutations in collagen disorders.
The Journal of biological chemistry 2004;279(45):46890-5.
2004: Anton V Persikov; Rian J Pillitteri; Priyal Amin; Ulrike Schwarze; Peter H Byers; Barbara Brodsky
Stability related bias in residues replacing glycines within the collagen triple helix (Gly-Xaa-Yaa) in inherited connective tissue disorders.
Human mutation 2004;24(4):330-7.
2004: Ellen W Doss-Pepe; Paola Deprez; Teresita Silva; Nibaldo C Inestrosa; Alan Kirkpatrick; John A M Ramshaw; Barbara Brodsky
Stepwise construction of triple-helical heparin binding sites using peptide models.
Biochimica et biophysica acta 2004;1698(2):187-95.
2004: Anton V Persikov; Yujia Xu; Barbara Brodsky
Equilibrium thermal transitions of collagen model peptides.
Protein science : a publication of the Protein Society 2004;13(4):893-902.
2003: Anton V Persikov; John A M Ramshaw; Alan Kirkpatrick; Barbara Brodsky
Triple-helix propensity of hydroxyproline and fluoroproline: comparison of host-guest and repeating tripeptide collagen models.
Journal of the American Chemical Society 2003;125(38):11500-1.
2003: Yujia Xu; Timothy Hyde; Xin Wang; Manjiri Bhate; Barbara Brodsky; Jean Baum
NMR and CD spectroscopy show that imino acid restriction of the unfolded state leads to efficient folding.
Biochemistry 2003;42(29):8696-703.
2003: Kristine V Simon-Lukasik; Anton V Persikov; Barbara Brodsky; John A M Ramshaw; William R Laws; J B Alexander Ross; Richard D Ludescher
Fluorescence determination of tryptophan side-chain accessibility and dynamics in triple-helical collagen-like peptides.
Biophysical journal 2003;84(1):501-8.
2002: Yujia Xu; Manjiri Bhate; Barbara Brodsky
Characterization of the nucleation step and folding of a collagen triple-helix peptide.
Biochemistry 2002;41(25):8143-51.
2002: Manjiri Bhate; Xin Wang; Jean Baum; Barbara Brodsky
Folding and conformational consequences of glycine to alanine replacements at different positions in a collagen model peptide.
Biochemistry 2002;41(20):6539-47.
2002: Anton V Persikov; John A M Ramshaw; Alan Kirkpatrick; Barbara Brodsky
Peptide investigations of pairwise interactions in the collagen triple-helix.
Journal of molecular biology 2002;316(2):385-94.
2002: Anton V Persikov; Barbara Brodsky
Unstable molecules form stable tissues.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(3):1101-3.
2001: RZ Kramer; Jordi Bella; Barbara Brodsky; Helen M Berman
The crystal and molecular structure of a collagen-like peptide with a biologically relevant sequence.
Journal of molecular biology 2001;311(1):131-47.
2000: Anton V Persikov; John A M Ramshaw; Alan Kirkpatrick; Barbara Brodsky
Amino acid propensities for the collagen triple-helix.
Biochemistry 2000;39(48):14960-7.
2000: Ellen W Doss-Pepe; P Deprez; Nibaldo C Inestrosa; Barbara Brodsky
Interaction of collagen-like peptide models of asymmetric acetylcholinesterase with glycosaminoglycans: spectroscopic studies of conformational changes and stability.
Biochemistry 2000;39(48):14884-92.
2000: RZ Kramer; M G Venugopal; Jordi Bella; P Mayville; Barbara Brodsky; Helen M Berman
Staggered molecular packing in crystals of a collagen-like peptide with a single charged pair.
Journal of molecular biology 2000;301(5):1191-205.
2000: Alexei V Buevich; Q H Dai; X Liu; Barbara Brodsky; Jean Baum
Site-specific NMR monitoring of cis-trans isomerization in the folding of the proline-rich collagen triple helix.
Biochemistry 2000;39(15):4299-308.
2000: K Beck; VC Chan; N Shenoy; Alan Kirkpatrick; John A M Ramshaw; Barbara Brodsky
Destabilization of osteogenesis imperfecta collagen-like model peptides correlates with the identity of the residue replacing glycine.
Proceedings of the National Academy of Sciences of the United States of America 2000;97(8):4273-8.
2000: Anton V Persikov; John A M Ramshaw; Barbara Brodsky
Collagen model peptides: Sequence dependence of triple-helix stability.
Biopolymers 2000;55(6):436-50.
1999: RZ Kramer; Jordi Bella; P Mayville; Barbara Brodsky; Helen M Berman
Sequence dependent conformational variations of collagen triple-helical structure.
Nature structural biology 1999;6(5):454-7.
1999: NK Shah; Barbara Brodsky; Alan Kirkpatrick; John A M Ramshaw
Structural consequences of D-amino acids in collagen triple-helical peptides.
Biopolymers 1999;49(4):297-302.
1999: Jean Baum; Barbara Brodsky
Folding of peptide models of collagen and misfolding in disease.
Current opinion in structural biology 1999;9(1):122-8.
1998: X Liu; Seho Kim; Q H Dai; Barbara Brodsky; Jean Baum
Nuclear magnetic resonance shows asymmetric loss of triple helix in peptides modeling a collagen mutation in brittle bone disease.
Biochemistry 1998;37(44):15528-33.
1998: RZ Kramer; Luigi Vitagliano; Jordi Bella; Rita Berisio; Lelio Mazzarella; Barbara Brodsky; Adriana Zagari; Helen M Berman
X-ray crystallographic determination of a collagen-like peptide with the repeating sequence (Pro-Pro-Gly).
Journal of molecular biology 1998;280(4):623-38.
1997: VC Chan; John A M Ramshaw; Alan Kirkpatrick; K Beck; Barbara Brodsky
Positional preferences of ionizable residues in Gly-X-Y triplets of the collagen triple-helix.
The Journal of biological chemistry 1997;272(50):31441-6.
1997: W Yang; VC Chan; Alan Kirkpatrick; John A M Ramshaw; Barbara Brodsky
Gly-Pro-Arg confers stability similar to Gly-Pro-Hyp in the collagen triple-helix of host-guest peptides.
The Journal of biological chemistry 1997;272(46):28837-40.
1997: W Yang; M L Battineni; Barbara Brodsky
Amino acid sequence environment modulates the disruption by osteogenesis imperfecta glycine substitutions in collagen-like peptides.
Biochemistry 1997;36(23):6930-5.
1997: NK Shah; M Sharma; Alan Kirkpatrick; John A M Ramshaw; Barbara Brodsky
Gly-Gly-containing triplets of low stability adjacent to a type III collagen epitope.
Biochemistry 1997;36(19):5878-83.
1997: Jean Baum; Barbara Brodsky
Real-time NMR investigations of triple-helix folding and collagen folding diseases.
Folding & design 1997;2(4):R53-60.
1996: S S Mielewczyk; Kenneth J Breslauer; R B Anachi; Barbara Brodsky
Binding studies of a triple-helical peptide model of macrophage scavenger receptor to tetraplex nucleic acids.
Biochemistry 1996;35(35):11396-402.
1996: N K Shah; John A M Ramshaw; Alan Kirkpatrick; C Shah; Barbara Brodsky
A host-guest set of triple-helical peptides: stability of Gly-X-Y triplets containing common nonpolar residues.
Biochemistry 1996;35(32):10262-8.
1996: X Liu; D L Siegel; P Fan; Barbara Brodsky; Jean Baum
Direct NMR measurement of folding kinetics of a trimeric peptide.
Biochemistry 1996;35(14):4306-13.
1996: Jordi Bella; Barbara Brodsky; Helen M Berman
Disrupted collagen architecture in the crystal structure of a triple-helical peptide with a Gly-->Ala substitution.
Connective tissue research 1996;35(1-4):401-6.
1995: Barbara Brodsky; N K Shah
Protein motifs. 8. The triple-helix motif in proteins.
FASEB journal : official publication of the Federation of American Societies for Experimental Biology 1995;9(15):1537-46.
1995: Jordi Bella; Barbara Brodsky; Helen M Berman
Hydration structure of a collagen peptide.
Structure (London, England : 1993) 1995;3(9):893-906.
1995: R B Anachi; D L Siegel; J Baum; Barbara Brodsky
Acid destabilization of a triple-helical peptide model of the macrophage scavenger receptor.
FEBS letters 1995;368(3):551-5.
1995: C G Long; M Thomas; Barbara Brodsky
Atypical Gly-X-Y sequences surround interruptions in the repeating tripeptide pattern of basement membrane collagen.
Biopolymers 1995;35(6):621-8.
1994: Barbara Brodsky; K C BelBruno; T A Hardt; E F Eikenberry
Collagen fibril structure in lamprey.
Journal of molecular biology 1994;243(1):38-47.
1994: Jordi Bella; M Eaton; Barbara Brodsky; Helen M Berman
Crystal and molecular structure of a collagen-like peptide at 1.9 A resolution.
Science (New York, N.Y.) 1994;266(5182):75-81.
1994: M G Venugopal; John A M Ramshaw; E Braswell; D Zhu; Barbara Brodsky
Electrostatic interactions in collagen-like triple-helical peptides.
Biochemistry 1994;33(25):7948-56.
1994: Barbara Brodsky; John A M Ramshaw
Collagen organization in an oriented fibrous capsule.
International journal of biological macromolecules 1994;16(1):27-30.
1993: P Fan; M H Li; Barbara Brodsky; Jean Baum
Backbone dynamics of (Pro-Hyp-Gly)10 and a designed collagen-like triple-helical peptide by 15N NMR relaxation and hydrogen-exchange measurements.
Biochemistry 1993;32(48):13299-309.
1993: C G Long; E Braswell; D Zhu; J Apigo; Jean Baum; Barbara Brodsky
Characterization of collagen-like peptides containing interruptions in the repeating Gly-X-Y sequence.
Biochemistry 1993;32(43):11688-95.
1993: M H Li; P Fan; Barbara Brodsky; Jean Baum
Two-dimensional NMR assignments and conformation of (Pro-Hyp-Gly)10 and a designed collagen triple-helical peptide.
Biochemistry 1993;32(29):7377-87.
1992: C G Long; M H Li; Jean Baum; Barbara Brodsky
Nuclear magnetic resonance and circular dichroism studies of a triple-helical peptide with a glycine substitution.
Journal of molecular biology 1992;225(1):1-4.
1992: Barbara Brodsky; M H Li; C G Long; J Apigo; Jean Baum
NMR and CD studies of triple-helical peptides.
Biopolymers 1992;32(4):447-51.
1992: P Bai; K Phua; T Hardt; M Cernadas; Barbara Brodsky
Glycation alters collagen fibril organization.
Connective tissue research 1992;28(1-2):1-12.
1988: S Tanaka; G Avigad; E F Eikenberry; Barbara Brodsky
Isolation and partial characterization of collagen chains dimerized by sugar-derived cross-links.
The Journal of biological chemistry 1988;263(33):17650-7.
1988: S Tanaka; G Avigad; Barbara Brodsky; E F Eikenberry
Glycation induces expansion of the molecular packing of collagen.
Journal of molecular biology 1988;203(2):495-505.
1988: J Kelly; S Tanaka; T Hardt; E F Eikenberry; Barbara Brodsky
Fibril-forming collagens in lamprey.
The Journal of biological chemistry 1988;263(2):980-7.
1986: S B Sheren; E F Eikenberry; D L Broek; M van der Rest; T Doering; J Kelly; T Hardt; Barbara Brodsky
Type II collagen of lamprey.
Comparative biochemistry and physiology. B, Comparative biochemistry 1986;85(1):5-14.
1985: D L Broek; J Madri; E F Eikenberry; Barbara Brodsky
Characterization of the tissue form of type V collagen from chick bone.
The Journal of biological chemistry 1985;260(1):555-62.
1984: E F Eikenberry; B Childs; S B Sheren; D A Parry; A S Craig; Barbara Brodsky
Crystalline fibril structure of type II collagen in lamprey notochord sheath.
Journal of molecular biology 1984;176(2):261-77.
1982: Barbara Brodsky; E F Eikenberry; K C Belbruno; K Sterling
Variations in collagen fibril structure in tendons.
Biopolymers 1982;21(5):935-51.
1980: E F Eikenberry; Barbara Brodsky
X-ray diffraction of reconstituted collagen fibers.
Journal of molecular biology 1980;144(3):397-404.