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Ali Zarrin

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Physiology

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Publications

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Yonglian Sun; Lucinda Tam; Søren Warming; Jiansheng Wu; Ronald Yeh; Miriam Baca; Mercedesz Balazs; Patrick Caplazi; Racquel Corpuz; Christopher Dela Cruz; Jason DeVoss; Lino C Gonzalez; Kajal Hamidzadeh; Maria N Lorenzo; Flavius Martin; Ivan Peng; Mike Reichelt; Meron Roose-Girma; Tao Sai; Andrew Sebrell; Kate Senger; Ali A Zarrin
Critical role of activation induced cytidine deaminase in experimental autoimmune encephalomyelitis.
Catherine Zhu; Louis Du Pasquier; Alyssa Finn; Victor Lee; Kate Senger; Ali A Zarrin; Ellen Hsu
Origin of immunoglobulin isotype switching.
Yonglian Sun; Irene Tom; Tomasz K Baginski; Yvonne Chinn; Jiabing Ding; Lino C Gonzalez; Benjamin Haley; Kajal Hamidzadeh; Philip E Hass; Sharookh B Kapadia; Elizabeth Luis; Yan Ma; Anita Mazloom; Kiran Mukhyala; Homer Pantua; Gabriel Quinones; Sree Ranjani Ramani; Tao Sai; Andrew Sebrell; Kate Senger; Hooman Shadnia; Ali A Zarrin
Evolutionarily conserved paired immunoglobulin-like receptor α (PILRα) domain mediates its interaction with diverse sialylated ligands.

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All Publications

2013: Yonglian Sun; Lucinda Tam; Søren Warming; Jiansheng Wu; Ronald Yeh; Miriam Baca; Mercedesz Balazs; Patrick Caplazi; Racquel Corpuz; Christopher Dela Cruz; Jason DeVoss; Lino C Gonzalez; Kajal Hamidzadeh; Maria N Lorenzo; Flavius Martin; Ivan Peng; Mike Reichelt; Meron Roose-Girma; Tao Sai; Andrew Sebrell; Kate Senger; Ali A Zarrin
Critical role of activation induced cytidine deaminase in experimental autoimmune encephalomyelitis.
Autoimmunity 2013;46(2):157-67.
2012: Catherine Zhu; Louis Du Pasquier; Alyssa Finn; Victor Lee; Kate Senger; Ali A Zarrin; Ellen Hsu
Origin of immunoglobulin isotype switching.
Current biology : CB 2012;22(10):872-80.
2012: Yonglian Sun; Irene Tom; Tomasz K Baginski; Yvonne Chinn; Jiabing Ding; Lino C Gonzalez; Benjamin Haley; Kajal Hamidzadeh; Philip E Hass; Sharookh B Kapadia; Elizabeth Luis; Yan Ma; Anita Mazloom; Kiran Mukhyala; Homer Pantua; Gabriel Quinones; Sree Ranjani Ramani; Tao Sai; Andrew Sebrell; Kate Senger; Hooman Shadnia; Ali A Zarrin
Evolutionarily conserved paired immunoglobulin-like receptor α (PILRα) domain mediates its interaction with diverse sialylated ligands.
The Journal of biological chemistry 2012;287(19):15837-50.
2010: Shahram Misaghi; Christopher S Garris; Yonglian Sun; Allen Nguyen; Juan Zhang; Andrew Sebrell; Kate Senger; Donghong Yan; Maria N Lorenzo; Sherry Heldens; Wyne P Lee; Min Xu; Jiansheng Wu; Laura DeForge; Tao Sai; Xiaodong Huang; Ali A Zarrin
Increased targeting of donor switch region and IgE in Sgamma1-deficient B cells.
Journal of immunology (Baltimore, Md. : 1950) 2010;185(1):166-73.
2010: Thomas Perlot; Inka Pawlitzky; John P Manis; Ali A Zarrin; Peter H Brodeur; Frederick W Alt
Analysis of mice lacking DNaseI hypersensitive sites at the 5' end of the IgH locus.
PloS one 2010;5(11):e13992.
2009: Yu-Nee Lee; Frederick W Alt; Julia Reyes; Megan Gleason; Ali A Zarrin; David Jung
Differential utilization of T cell receptor TCR alpha/TCR delta locus variable region gene segments is mediated by accessibility.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(41):17487-92.
2009: Jing H Wang; Monica Gostissa; Catherine T Yan; Peter Goff; Thomas Hickernell; Erica Hansen; Simone Difilippantonio; Duane R Wesemann; Ali A Zarrin; Klaus Rajewsky; André Nussenzweig; Frederick W Alt
Mechanisms promoting translocations in editing and switching peripheral B cells.
Nature 2009;460(7252):231-6.
2009: Jason A Hackney; Shahram Misaghi; Kate Senger; Christopher Garris; Yonglian Sun; Maria N Lorenzo; Ali A Zarrin
DNA targets of AID evolutionary link between antibody somatic hypermutation and class switch recombination.
Advances in immunology 2009;101():163-89.
2008: Ali A Zarrin; Peter H Goff; Kate Senger; Frederick W Alt
Sgamma3 switch sequences function in place of endogenous Sgamma1 to mediate antibody class switching.
The Journal of experimental medicine 2008;205(7):1567-72.
2007: Catherine T Yan; Cristian Boboila; Ellen Kris Souza; Sonia Franco; Thomas R Hickernell; Michael Murphy; Sunil Gumaste; Mark Geyer; Ali A Zarrin; John P Manis; Klaus Rajewsky; Frederick W Alt
IgH class switching and translocations use a robust non-classical end-joining pathway.
Nature 2007;449(7161):478-82.
2007: Ali A Zarrin; Catherine Del Vecchio; Eva Tseng; Megan Gleason; Payam Zarin; Ming Tian; Frederick W Alt
Antibody class switching mediated by yeast endonuclease-generated DNA breaks.
Science (New York, N.Y.) 2007;315(5810):377-81.
2007: Jayanta Chaudhuri; Uttiya Basu; Ali A Zarrin; Catherine Yan; Sonia Franco; Thomas Perlot; Bao Vuong; Jing Wang; Ryan T Phan; Abhishek Datta; John P Manis; Frederick W Alt
Evolution of the immunoglobulin heavy chain class switch recombination mechanism.
Advances in immunology 2007;94():157-214.
2006: Sonia Franco; Monica Gostissa; Shan Zha; David Lombard; Michael M Murphy; Ali A Zarrin; Catherine Yan; Suprawee Tepsuporn; Julio Cesar Morales; Melissa M Adams; Zhenkun Lou; Craig H Bassing; John P Manis; Junjie Chen; Phillip B Carpenter; Frederick W Alt
H2AX prevents DNA breaks from progressing to chromosome breaks and translocations.
Molecular cell 2006;21(2):201-14.
2005: Ali A Zarrin; Ming Tian; Jing Wang; Tiffany Borjeson; Frederick W Alt
Influence of switch region length on immunoglobulin class switch recombination.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(7):2466-70.
2004: Ali A Zarrin; Frederick W Alt; Jayanta Chaudhuri; Nicole Stokes; Dhruv Kaushal; Louis Du Pasquier; Ming Tian
An evolutionarily conserved target motif for immunoglobulin class-switch recombination.
Nature immunology 2004;5(12):1275-81.
2002: Darryll D Dudley; John P Manis; Ali A Zarrin; Lianne Kaylor; Ming Tian; Frederick W Alt
Internal IgH class switch region deletions are position-independent and enhanced by AID expression.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(15):9984-9.