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Charles Brooks
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14
Tama, Florence
12
Im, Wonpil
11
Chen, Jianhan
8
Feig, Michael
7
Price, Daniel
6
Reddy, Vijay
6
Skolnick, Jeffrey
6
Karanicolas, John
6
Khandogin, Jana
5
Kolinski, Andrzej
5
Johnson, John
5
Onuchic, José
4
Thorpe, Ian
4
Dominy, Brian
4
Salsbury, Freddie
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All Publications
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2009: Michino Mayako; Brooks Charles L
Predicting structurally conserved contacts for homologous proteins using sequence conservation filters.
Proteins 2009;77(2):448-53.
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2009: Michino Mayako; Abola Enrique; Brooks Charles L; Dixon J Scott; Moult John; Stevens Raymond C
Community-wide assessment of GPCR structure modelling and ligand docking: GPCR Dock 2008.
Nature reviews. Drug discovery 2009;8(6):455-63.
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2009: Mannige Ranjan V; Brooks Charles L
Geometric considerations in virus capsid size specificity, auxiliary requirements, and buckling.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(21):8531-6.
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2009: Hills Ronald D; Brooks Charles L
Insights from coarse-grained go models for protein folding and dynamics.
International journal of molecular sciences 2009;10(3):889-905.
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2008: Hills Ronald D; Brooks Charles L
Coevolution of function and the folding landscape: correlation with density of native contacts.
Biophysical journal 2008;95(9):L57-9.
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2008: Carrillo-Tripp Mauricio; Brooks Charles L; Reddy Vijay S
A novel method to map and compare protein-protein interactions in spherical viral capsids.
Proteins 2008;73(3):644-55.
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2008: Hills Ronald D; Brooks Charles L
Subdomain competition, cooperativity, and topological frustration in the folding of CheY.
Journal of molecular biology 2008;382(2):485-95.
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2008: Mannige Ranjan V; Brooks Charles L
Tilable nature of virus capsids and the role of topological constraints in natural capsid design.
Physical review. E, Statistical, nonlinear, and soft matter physics 2008;77(5 Pt 1):051902.
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2008: Szurmant Hendrik; Bu Lintao; Brooks Charles L; Hoch James A
An essential sensor histidine kinase controlled by transmembrane helix interactions with its auxiliary proteins.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(15):5891-6.
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2008: Bu Lintao; Brooks Charles L
De novo prediction of the structures of M. tuberculosis membrane proteins.
Journal of the American Chemical Society 2008;130(16):5384-5.
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2008: Chen Jianhan; Brooks Charles L; Khandogin Jana
Recent advances in implicit solvent-based methods for biomolecular simulations.
Current opinion in structural biology 2008;18(2):140-8.
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2008: Bu Lintao; Michino Mayako; Wolf Romain M; Brooks Charles L
Improved model building and assessment of the Calcium-sensing receptor transmembrane domain.
Proteins 2008;71(1):215-26.
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2008: Olson Mark A; Feig Michael; Brooks Charles L
Prediction of protein loop conformations using multiscale modeling methods with physical energy scoring functions.
Journal of computational chemistry 2008;29(5):820-31.
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2008: Chen Jianhan; Brooks Charles L; Scheraga Harold A
Revisiting the carboxylic acid dimers in aqueous solution: interplay of hydrogen bonding, hydrophobic interactions, and entropy.
The journal of physical chemistry. B 2008;112(2):242-9.
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2007: Arora Karunesh; Brooks Charles L
Large-scale allosteric conformational transitions of adenylate kinase appear to involve a population-shift mechanism.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(47):18496-501.
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2007: Khandogin Jana; Brooks Charles L
Linking folding with aggregation in Alzheimer's beta-amyloid peptides.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(43):16880-5.
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2007: Khavrutskii Ilja V; Price Daniel J; Lee Jinhyuk; Brooks Charles L
Conformational change of the methionine 20 loop of Escherichia coli dihydrofolate reductase modulates pKa of the bound dihydrofolate.
Protein science : a publication of the Protein Society 2007;16(6):1087-100.
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2007: Bostick David L; Brooks Charles L
On the equivalence point for ammonium (de)protonation during its transport through the AmtB channel.
Biophysical journal 2007;92(12):L103-5.
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2007: Chen Jianhan; Brooks Charles L
Can molecular dynamics simulations provide high-resolution refinement of protein structure?
Proteins 2007;67(4):922-30.
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2007: Bostick David L; Brooks Charles L
Selectivity in K+ channels is due to topological control of the permeant ion's coordinated state.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(22):9260-5.
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2007: Thorpe Ian F; Brooks Charles L
Molecular evolution of affinity and flexibility in the immune system.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(21):8821-6.
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2007: Hills Ronald D; Brooks Charles L
Hydrophobic cooperativity as a mechanism for amyloid nucleation.
Journal of molecular biology 2007;368(3):894-901.
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2007: Khandogin Jana; Raleigh Daniel P; Brooks Charles L
Folding intermediate in the villin headpiece domain arises from disruption of a N-terminal hydrogen-bonded network.
Journal of the American Chemical Society 2007;129(11):3056-7.
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2007: Chen Jianhan; Brooks Charles L
Critical importance of length-scale dependence in implicit modeling of hydrophobic interactions.
Journal of the American Chemical Society 2007;129(9):2444-5.
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2007: Bostick David L; Brooks Charles L
Deprotonation by dehydration: the origin of ammonium sensing in the AmtB channel.
PLoS computational biology 2007;3(2):e22.
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2007: Bu Lintao; Im Wonpil; Brooks Charles L
Membrane assembly of simple helix homo-oligomers studied via molecular dynamics simulations.
Biophysical journal 2007;92(3):854-63.
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2006: Khandogin Jana; Chen Jianhan; Brooks Charles L
Exploring atomistic details of pH-dependent peptide folding.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(49):18546-50.
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2006: Khavrutskii Ilja V; Arora Karunesh; Brooks Charles L
Harmonic Fourier beads method for studying rare events on rugged energy surfaces.
The Journal of chemical physics 2006;125(17):174108.
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2006: Sherman Michael B; Guenther Richard H; Tama Florence; Sit Tim L; Brooks Charles L; Mikhailov Albert M; Orlova Elena V; Baker Timothy S; Lommel Steven A
Removal of divalent cations induces structural transitions in red clover necrotic mosaic virus, revealing a potential mechanism for RNA release.
Journal of virology 2006;80(21):10395-406.
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2006: Zimmermann Jörg; Oakman Erin L; Thorpe Ian F; Shi Xinghua; Abbyad Paul; Brooks Charles L; Boxer Steven G; Romesberg Floyd E
Antibody evolution constrains conformational heterogeneity by tailoring protein dynamics.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(37):13722-7.
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2006: Tama Florence; Ren Gang; Brooks Charles L; Mitra Alok K
Model of the toxic complex of anthrax: responsive conformational changes in both the lethal factor and the protective antigen heptamer.
Protein science : a publication of the Protein Society 2006;15(9):2190-200.
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2006: Khandogin Jana; Brooks Charles L
Toward the accurate first-principles prediction of ionization equilibria in proteins.
Biochemistry 2006;45(31):9363-73.
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2006: Konecny Robert; Trylska Joanna; Tama Florence; Zhang Deqiang; Baker Nathan A; Brooks Charles L; McCammon J A
Electrostatic properties of cowpea chlorotic mottle virus and cucumber mosaic virus capsids.
Biopolymers 2006;82(2):106-20.
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2006: Patel Sandeep A; Brooks Charles L
Revisiting the hexane-water interface via molecular dynamics simulations using nonadditive alkane-water potentials.
The Journal of chemical physics 2006;124(20):204706.
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2006: Khavrutskii Ilja V; Byrd Richard H; Brooks Charles L
A line integral reaction path approximation for large systems via nonlinear constrained optimization: application to alanine dipeptide and the beta hairpin of protein G.
The Journal of chemical physics 2006;124(19):194903.
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2006: Yadav Maneesh K; Leman Luke J; Price Daniel J; Brooks Charles L; Stout C David; Ghadiri M Reza
Coiled coils at the edge of configurational heterogeneity. Structural analyses of parallel and antiparallel homotetrameric coiled coils reveal configurational sensitivity to a single solvent-exposed amino acid substitution.
Biochemistry 2006;45(14):4463-73.
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2006: Chen Jianhan; Im Wonpil; Brooks Charles L
Balancing solvation and intramolecular interactions: toward a consistent generalized Born force field.
Journal of the American Chemical Society 2006;128(11):3728-36.
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2006: Shepherd Craig M; Borelli Ian A; Lander Gabriel; Natarajan Padmaja; Siddavanahalli Vinay; Bajaj Chandrajit; Johnson John E; Brooks Charles L; Reddy Vijay S
VIPERdb: a relational database for structural virology.
Nucleic acids research 2006;34(Database issue):D386-9.
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2006: Tama Florence; Brooks Charles L
Symmetry, form, and shape: guiding principles for robustness in macromolecular machines.
Annual review of biophysics and biomolecular structure 2006;35():115-33.
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2005: Mitra Kakoli; Schaffitzel Christiane; Shaikh Tanvir; Tama Florence; Jenni Simon; Brooks Charles L; Ban Nenad; Frank Joachim
Structure of the E. coli protein-conducting channel bound to a translating ribosome.
Nature 2005;438(7066):318-24.
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2005: Chen Jianhan; Im Wonpil; Brooks Charles L
Application of torsion angle molecular dynamics for efficient sampling of protein conformations.
Journal of computational chemistry 2005;26(15):1565-78.
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2005: Price Daniel J; Brooks Charles L
Detailed considerations for a balanced and broadly applicable force field: a study of substituted benzenes modeled with OPLS-AA.
Journal of computational chemistry 2005;26(14):1529-41.
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2005: Patel Sandeep; Brooks Charles L
Structure, thermodynamics, and liquid-vapor equilibrium of ethanol from molecular-dynamics simulations using nonadditive interactions.
The Journal of chemical physics 2005;123(16):164502.
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2005: Natarajan Padmaja; Lander Gabriel C; Shepherd Craig M; Reddy Vijay S; Brooks Charles L; Johnson John E
Exploring icosahedral virus structures with VIPER.
Nature reviews. Microbiology 2005;3(10):809-17.
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2005: Thorpe Ian F; Brooks Charles L
Conformational substates modulate hydride transfer in dihydrofolate reductase.
Journal of the American Chemical Society 2005;127(37):12997-3006.
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2005: Khandogin Jana; Brooks Charles L
Constant pH molecular dynamics with proton tautomerism.
Biophysical journal 2005;89(1):141-57.
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2005: Im Wonpil; Brooks Charles L
Interfacial folding and membrane insertion of designed peptides studied by molecular dynamics simulations.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(19):6771-6.
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2005: Falke Scott; Tama Florence; Brooks Charles L; Gogol Edward P; Fisher Mark T
The 13 angstroms structure of a chaperonin GroEL-protein substrate complex by cryo-electron microscopy.
Journal of molecular biology 2005;348(1):219-30.
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2005: Guvench Olgun; Brooks Charles L
Tryptophan side chain electrostatic interactions determine edge-to-face vs parallel-displaced tryptophan side chain geometries in the designed beta-hairpin "trpzip2".
Journal of the American Chemical Society 2005;127(13):4668-74.
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2005: Guvench Olgun; Price Daniel J; Brooks Charles L
Receptor rigidity and ligand mobility in trypsin-ligand complexes.
Proteins 2005;58(2):407-17.
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2005: Chen Jianhan; Won Hyung-Sik; Im Wonpil; Dyson H Jane; Brooks Charles L
Generation of native-like protein structures from limited NMR data, modern force fields and advanced conformational sampling.
Journal of biomolecular NMR 2005;31(1):59-64.
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2005: Patel Sandeep; Brooks Charles L
A nonadditive methanol force field: bulk liquid and liquid-vapor interfacial properties via molecular dynamics simulations using a fluctuating charge model.
The Journal of chemical physics 2005;122(2):024508.
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2005: Tama Florence; Feig Michael; Liu Jun; Brooks Charles L; Taylor Kenneth A
The requirement for mechanical coupling between head and S2 domains in smooth muscle myosin ATPase regulation and its implications for dimeric motor function.
Journal of molecular biology 2005;345(4):837-54.
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2005: Tama Florence; Brooks Charles L
Diversity and identity of mechanical properties of icosahedral viral capsids studied with elastic network normal mode analysis.
Journal of molecular biology 2005;345(2):299-314.
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2005: Im Wonpil; Chen Jianhan; Brooks Charles L
Peptide and protein folding and conformational equilibria: theoretical treatment of electrostatics and hydrogen bonding with implicit solvent models.
Advances in protein chemistry 2005;72():173-98.
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2004: Chen Jianhan; Im Wonpil; Brooks Charles L
Refinement of NMR structures using implicit solvent and advanced sampling techniques.
Journal of the American Chemical Society 2004;126(49):16038-47.
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2004: Price Daniel J; Brooks Charles L
A modified TIP3P water potential for simulation with Ewald summation.
The Journal of chemical physics 2004;121(20):10096-103.
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2004: Thorpe Ian F; Brooks Charles L
The coupling of structural fluctuations to hydride transfer in dihydrofolate reductase.
Proteins 2004;57(3):444-57.
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2004: Tama Florence; Miyashita Osamu; Brooks Charles L
Normal mode based flexible fitting of high-resolution structure into low-resolution experimental data from cryo-EM.
Journal of structural biology 2004;147(3):315-26.
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2004: Lee Michael S; Salsbury Freddie R; Brooks Charles L
Constant-pH molecular dynamics using continuous titration coordinates.
Proteins 2004;56(4):738-52.
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2004: Patel Sandeep; Mackerell Alexander D; Brooks Charles L
CHARMM fluctuating charge force field for proteins: II protein/solvent properties from molecular dynamics simulations using a nonadditive electrostatic model.
Journal of computational chemistry 2004;25(12):1504-14.
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2004: Trylska Joanna; Konecny Robert; Tama Florence; Brooks Charles L; McCammon J Andrew
Ribosome motions modulate electrostatic properties.
Biopolymers 2004;74(6):423-31.
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2004: Chen Jianhan; Brooks Charles L; Wright Peter E
Model-free analysis of protein dynamics: assessment of accuracy and model selection protocols based on molecular dynamics simulation.
Journal of biomolecular NMR 2004;29(3):243-57.
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2004: Stoycheva Antitsa D; Brooks Charles L; Onuchic José N
Gatekeepers in the ribosomal protein s6: thermodynamics, kinetics, and folding pathways revealed by a minimalist protein model.
Journal of molecular biology 2004;340(3):571-85.
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2004: Ferrara Philippe; Gohlke Holger; Price Daniel J; Klebe Gerhard; Brooks Charles L
Assessing scoring functions for protein-ligand interactions.
Journal of medicinal chemistry 2004;47(12):3032-47.
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2004: Guvench Olgun; Brooks Charles L
Efficient approximate all-atom solvent accessible surface area method parameterized for folded and denatured protein conformations.
Journal of computational chemistry 2004;25(8):1005-14.
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2004: Feig Michael; Karanicolas John; Brooks Charles L
MMTSB Tool Set: enhanced sampling and multiscale modeling methods for applications in structural biology.
Journal of molecular graphics & modelling 2004;22(5):377-95.
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2004: Feig Michael; Brooks Charles L
Recent advances in the development and application of implicit solvent models in biomolecule simulations.
Current opinion in structural biology 2004;14(2):217-24.
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2004: Tama Florence; Miyashita Osamu; Brooks Charles L
Flexible multi-scale fitting of atomic structures into low-resolution electron density maps with elastic network normal mode analysis.
Journal of molecular biology 2004;337(4):985-99.
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2004: Im Wonpil; Brooks Charles L
De novo folding of membrane proteins: an exploration of the structure and NMR properties of the fd coat protein.
Journal of molecular biology 2004;337(3):513-9.
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2004: Karanicolas John; Brooks Charles L
Integrating folding kinetics and protein function: biphasic kinetics and dual binding specificity in a WW domain.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(10):3432-7.
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2004: Feig Michael; Im Wonpil; Brooks Charles L
Implicit solvation based on generalized Born theory in different dielectric environments.
The Journal of chemical physics 2004;120(2):903-11.
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2004: Feig Michael; Onufriev Alexey; Lee Michael S; Im Wonpil; Case David A; Brooks Charles L
Performance comparison of generalized born and Poisson methods in the calculation of electrostatic solvation energies for protein structures.
Journal of computational chemistry 2004;25(2):265-84.
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2004: Patel Sandeep; Brooks Charles L
CHARMM fluctuating charge force field for proteins: I parameterization and application to bulk organic liquid simulations.
Journal of computational chemistry 2004;25(1):1-15.
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2003: Bursulaya Badry D; Totrov Maxim; Abagyan Ruben; Brooks Charles L
Comparative study of several algorithms for flexible ligand docking.
Journal of computer-aided molecular design 2003;17(11):755-63.
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2003: Ohkubo Y Zenmei; Brooks Charles L
Exploring Flory's isolated-pair hypothesis: statistical mechanics of helix-coil transitions in polyalanine and the C-peptide from RNase A.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(24):13916-21.
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2003: Karanicolas John; Brooks Charles L
Improved Go-like models demonstrate the robustness of protein folding mechanisms towards non-native interactions.
Journal of molecular biology 2003;334(2):309-25.
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2003: Im Wonpil; Feig Michael; Brooks Charles L
An implicit membrane generalized born theory for the study of structure, stability, and interactions of membrane proteins.
Biophysical journal 2003;85(5):2900-18.
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2003: Karanicolas John; Brooks Charles L
The importance of explicit chain representation in protein folding models: an examination of Ising-like models.
Proteins 2003;53(3):740-7.
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2003: Im Wonpil; Lee Michael S; Brooks Charles L
Generalized born model with a simple smoothing function.
Journal of computational chemistry 2003;24(14):1691-702.
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2003: Salsbury Freddie R; Han Wen-Ge; Noodleman Louis; Brooks Charles L
Temperature-dependent behavior of protein-chromophore interactions: a theoretical study of a blue fluorescent antibody.
Chemphyschem : a European journal of chemical physics and physical chemistry 2003;4(8):848-55.
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2003: Tama Florence; Valle Mikel; Frank Joachim; Brooks Charles L
Dynamic reorganization of the functionally active ribosome explored by normal mode analysis and cryo-electron microscopy.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(16):9319-23.
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2003: Lee Michael S; Feig Michael; Salsbury Freddie R; Brooks Charles L
New analytic approximation to the standard molecular volume definition and its application to generalized Born calculations.
Journal of computational chemistry 2003;24(11):1348-56.
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2003: Rod Thomas H; Radkiewicz Jennifer L; Brooks Charles L
Correlated motion and the effect of distal mutations in dihydrofolate reductase.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(12):6980-5.
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2003: Karanicolas John; Brooks Charles L
The structural basis for biphasic kinetics in the folding of the WW domain from a formin-binding protein: lessons for protein design?
Proceedings of the National Academy of Sciences of the United States of America 2003;100(7):3954-9.
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2002: Damodaran K V; Reddy Vijay S; Johnson John E; Brooks Charles L
A general method to quantify quasi-equivalence in icosahedral viruses.
Journal of molecular biology 2002;324(4):723-37.
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2002: Shea Joan-Emma; Onuchic Jose N; Brooks Charles L
Probing the folding free energy landscape of the Src-SH3 protein domain.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(25):16064-8.
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2002: Feig Michael; Brooks Charles L
Evaluating CASP4 predictions with physical energy functions.
Proteins 2002;49(2):232-45.
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2002: Karanicolas John; Brooks Charles L
The origins of asymmetry in the folding transition states of protein L and protein G.
Protein science : a publication of the Protein Society 2002;11(10):2351-61.
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2002: Tama Florence; Wriggers Willy; Brooks Charles L
Exploring global distortions of biological macromolecules and assemblies from low-resolution structural information and elastic network theory.
Journal of molecular biology 2002;321(2):297-305.
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2002: Price Daniel J; Brooks Charles L
Modern protein force fields behave comparably in molecular dynamics simulations.
Journal of computational chemistry 2002;23(11):1045-57.
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2002: Brooks Charles L
Protein and peptide folding explored with molecular simulations.
Accounts of chemical research 2002;35(6):447-54.
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2002: Tama Florence; Brooks Charles L
The mechanism and pathway of pH induced swelling in cowpea chlorotic mottle virus.
Journal of molecular biology 2002;318(3):733-47.
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2002: Dominy Brian N; Perl Dieter; Schmid Franz X; Brooks Charles L
The effects of ionic strength on protein stability: the cold shock protein family.
Journal of molecular biology 2002;319(2):541-54.
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2002: Brooks Charles L
Viewing protein folding from many perspectives.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(3):1099-100.
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2002: Dominy Brian N; Brooks Charles L
Identifying native-like protein structures using physics-based potentials.
Journal of computational chemistry 2002;23(1):147-60.
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2001: Reddy V S; Natarajan P; Okerberg B; Li K; Damodaran K V; Morton R T; Brooks C L; Johnson J E
Virus Particle Explorer (VIPER), a website for virus capsid structures and their computational analyses.
Journal of virology 2001;75(24):11943-7.
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2001: Roche O; Kiyama R; Brooks C L
Ligand-protein database: linking protein-ligand complex structures to binding data.
Journal of medicinal chemistry 2001;44(22):3592-8.
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2001: Salsbury F R; Crowley M F; Brooks C L
Modeling of the metallo-beta-lactamase from B. fragilis: structural and dynamic effects of inhibitor binding.
Proteins 2001;44(4):448-59.
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2001: Brooks C L; Onuchic J N; Wales D J
Statistical thermodynamics. Taking a walk on a landscape.
Science (New York, N.Y.) 2001;293(5530):612-3.
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2000: Feig M; Rotkiewicz P; Kolinski A; Skolnick J; Brooks C L
Accurate reconstruction of all-atom protein representations from side-chain-based low-resolution models.
Proteins 2000;41(1):86-97.
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1999: Shea J E; Onuchic J N; Brooks C L
Exploring the origins of topological frustration: design of a minimally frustrated model of fragment B of protein A.
Proceedings of the National Academy of Sciences of the United States of America 1999;96(22):12512-7.
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1999: Dominy B N; Brooks C L
Methodology for protein-ligand binding studies: application to a model for drug resistance, the HIV/FIV protease system.
Proteins 1999;36(3):318-31.
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1999: Mohanty D; Dominy B N; Kolinski A; Brooks C L; Skolnick J
Correlation between knowledge-based and detailed atomic potentials: application to the unfolding of the GCN4 leucine zipper.
Proteins 1999;35(4):447-52.
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1998: Vieth M; Hirst J D; Brooks C L
Do active site conformations of small ligands correspond to low free-energy solution structures?
Journal of computer-aided molecular design 1998;12(6):563-72.
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1998: Brooks C L; Gruebele M; Onuchic J N; Wolynes P G
Chemical physics of protein folding.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(19):11037-8.
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1998: Sheinerman F B; Brooks C L
Calculations on folding of segment B1 of streptococcal protein G.
Journal of molecular biology 1998;278(2):439-56.
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1998: Brooks C L
Simulations of protein folding and unfolding.
Current opinion in structural biology 1998;8(2):222-6.
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1998: Sheinerman F B; Brooks C L
Molecular picture of folding of a small alpha/beta protein.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(4):1562-7.
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1998: Reddy V S; Giesing H A; Morton R T; Kumar A; Post C B; Brooks C L; Johnson J E
Energetics of quasiequivalence: computational analysis of protein-protein interactions in icosahedral viruses.
Biophysical journal 1998;74(1):546-58.
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1997: Guo Z; Brooks C L
Thermodynamics of protein folding: a statistical mechanical study of a small all-beta protein.
Biopolymers 1997;42(7):745-57.
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1997: Sheinerman F B; Brooks C L
A molecular dynamics simulation study of segment B1 of protein G.
Proteins 1997;29(2):193-202.
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1997: Guo Z; Brooks C L; Boczko E M
Exploring the folding free energy surface of a three-helix bundle protein.
Proceedings of the National Academy of Sciences of the United States of America 1997;94(19):10161-6.
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1997: Shirley W A; Brooks C L
Curious structure in "canonical" alanine-based peptides.
Proteins 1997;28(1):59-71.
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1996: Hirst J D; Vieth M; Skolnick J; Brooks C L
Predicting leucine zipper structures from sequence.
Protein engineering 1996;9(8):657-62.
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1996: Vieth M; Kolinski A; Brooks C L; Skolnick J
Prediction of the quaternary structure of coiled coils: GCN4 leucine zipper and its mutants.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 1996;():653-62.
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1995: Vieth M; Kolinski A; Brooks C L; Skolnick J
Prediction of quaternary structure of coiled coils. Application to mutants of the GCN4 leucine zipper.
Journal of molecular biology 1995;251(3):448-67.
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1995: Boczko E M; Brooks C L
First-principles calculation of the folding free energy of a three-helix bundle protein.
Science (New York, N.Y.) 1995;269(5222):393-6.
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1994: Vieth M; Kolinski A; Brooks C L; Skolnick J
Prediction of the folding pathways and structure of the GCN4 leucine zipper.
Journal of molecular biology 1994;237(4):361-7.
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