Preview
Sign-in for full Details 
Sign-in free and Explore the Exciting World of BiomedExperts:
- Over 1.500.000 Profiles
- More than 1.800 Organizations worldwide
- State of the Art Network Visualizations
- Manage your own Profile
- Locate Experts in your Country/Region
- Locate Experts in your 1. and 2. Level Network
- Connect to Experts Worldwide
NetworkView
Gavin Sherlock
This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers
together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles
free of charge to researchers worldwide.
Research Profile (preview)
Devices
Concepts & Ideas
Occupations
Activities & Behaviors
Genes & Molecular Sequences
Living Beings
Physiology
Chemicals & Drugs
Sign-in to see full Profile
Network (preview)
24
Ball, Catherine
15
Botstein, David
13
Spellman, Paul
13
Matese, John
11
Brazma, Alvis
10
Stoeckert, Christian
9
Quackenbush, John
9
Cherry, Michael
9
Binkley, Gail
9
Brown, Patrick
9
Jin, Heng
8
Causton, Helen
8
Parkinson, Helen
7
Weng, Shuai
7
Dwight, Selina
Sign-in to see all Coauthors
Publications
Sign-in to see all Publications
Sign in free and see...
Visualized networks:
See your personal network in
sophisticated graphical views
GeoTargeted Searches:
Locate experts around the world
and connect with global collaborators
Research Profiles:
See the visualized research activity
of experts around the globe
Sign-in to see more
Geonetwork of Gavin Sherlock (preview)
Cities where this author has publications
Cities where co-authors of this author have publications
Sign-in to see more
All Publications
-
2009: Arnaud Martha B; Costanzo Maria C; Shah Prachi; Skrzypek Marek S; Sherlock Gavin
Gene Ontology and the annotation of pathogen genomes: the case of Candida albicans.
Trends in microbiology 2009;17(7):295-303.
-
2008: Dunn Barbara; Sherlock Gavin
Reconstruction of the genome origins and evolution of the hybrid lager yeast Saccharomyces pastorianus.
Genome research 2008;18(10):1610-23.
-
2008: Cho Robert W; Wang Xinhao; Diehn Maximilian; Shedden Kerby; Chen Grace Y; Sherlock Gavin; Gurney Austin; Lewicki John; Clarke Michael F
Isolation and molecular characterization of cancer stem cells in MMTV-Wnt-1 murine breast tumors.
Stem cells (Dayton, Ohio) 2008;26(2):364-71.
-
2008: Marinelli Robert J; Montgomery Kelli; Liu Chih Long; Shah Nigam H; Prapong Wijan; Nitzberg Michael; Zachariah Zachariah K; Sherlock Gavin J; Natkunam Yasodha; West Robert B; van de Rijn Matt; Brown Patrick O; Ball Catherine A
The Stanford Tissue Microarray Database.
Nucleic acids research 2008;36(Database issue):D871-7.
-
2008: Maier Don; Wymore Farrell; Sherlock Gavin; Ball Catherine A
The XBabelPhish MAGE-ML and XML translator.
BMC bioinformatics 2008;9():28.
-
2007: Liu Rui; Wang Xinhao; Chen Grace Y; Dalerba Piero; Gurney Austin; Hoey Timothy; Sherlock Gavin; Lewicki John; Shedden Kerby; Clarke Michael F
The prognostic role of a gene signature from tumorigenic breast-cancer cells.
The New England journal of medicine 2007;356(3):217-26.
-
2007: Demeter Janos; Beauheim Catherine; Gollub Jeremy; Hernandez-Boussard Tina; Jin Heng; Maier Donald; Matese John C; Nitzberg Michael; Wymore Farrell; Zachariah Zachariah K; Brown Patrick O; Sherlock Gavin; Ball Catherine A
The Stanford Microarray Database: implementation of new analysis tools and open source release of software.
Nucleic acids research 2007;35(Database issue):D766-70.
-
2007: Arnaud Martha B; Costanzo Maria C; Skrzypek Marek S; Shah Prachi; Binkley Gail; Lane Christopher; Miyasato Stuart R; Sherlock Gavin
Sequence resources at the Candida Genome Database.
Nucleic acids research 2007;35(Database issue):D452-6.
-
2007: Beauheim Catherine C; Wymore Farrell; Nitzberg Michael; Zachariah Zachariah K; Jin Heng; Skene J H Pate; Ball Catherine A; Sherlock Gavin
OntologyWidget - a reusable, embeddable widget for easily locating ontology terms.
BMC bioinformatics 2007;8():338.
-
2006: Sherlock Gavin
Cell cycle: complex evolution.
Nature 2006;443(7111):513-5.
-
2006: Helland Aslaug; Johnsen Hilde; Frøyland Caroline; Landmark Hege B K; Saetersdal Anna B; Holmen Marit Muri; Gjertsen Turid; Nesland Jahn M; Ottestad William; Jeffrey Stefanie S; Ottestad Lars O; Rodningen Olag K; Sherlock Gavin; Børresen-Dale Anne-Lise
Radiation-induced effects on gene expression: an in vivo study on breast cancer.
Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology 2006;80(2):230-5.
-
2006: Costanzo Maria C; Arnaud Martha B; Skrzypek Marek S; Binkley Gail; Lane Christopher; Miyasato Stuart R; Sherlock Gavin
The Candida Genome Database: facilitating research on Candida albicans molecular biology.
FEMS yeast research 2006;6(5):671-84.
-
2006: Quackenbush John; Stoeckert Christian; Ball Catherine; Brazma Alvis; Gentleman Robert; Huber Wolfgang; Irizarry Rafael; Salit Marc; Sherlock Gavin; Spellman Paul; Winegarden Neil
Top-down standards will not serve systems biology.
Nature 2006;440(7080):24.
-
2006: Stoeckert Christian; Ball Catherine; Brazma Alvis; Brinkman Ryan; Causton Helen; Fan Liju; Fostel Jennifer; Fragoso Gilberto; Heiskanen Mervi; Holstege Frank; Morrison Norman; Parkinson Helen; Quackenbush John; Rocca-Serra Philippe; Sansone Susanna-Assunta; Sarkans Ugis; Sherlock Gavin; Stevens Robert; Taylor Chris; Taylor Ronald; Whetzel Patricia; White Joseph
Wrestling with SUMO and bio-ontologies.
Nature biotechnology 2006;24(1):21-2; author reply 23.
-
2006: Rayner Tim F; Rocca-Serra Philippe; Spellman Paul T; Causton Helen C; Farne Anna; Holloway Ele; Irizarry Rafael A; Liu Junmin; Maier Donald S; Miller Michael; Petersen Kjell; Quackenbush John; Sherlock Gavin; Stoeckert Christian J; White Joseph; Whetzel Patricia L; Wymore Farrell; Parkinson Helen; Sarkans Ugis; Ball Catherine A; Brazma Alvis
A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB.
BMC bioinformatics 2006;7():489.
-
2006: Gollub Jeremy; Sherlock Gavin
Clustering microarray data.
Methods in enzymology 2006;411():194-213.
-
2006: Gollub Jeremy; Ball Catherine A; Sherlock Gavin
The Stanford Microarray Database: a user's guide.
Methods in molecular biology (Clifton, N.J.) 2006;338():191-208.
-
2006: Brown James A; Sherlock Gavin; Myers Chad L; Burrows Nicola M; Deng Changchun; Wu H Irene; McCann Kelly E; Troyanskaya Olga G; Brown J Martin
Global analysis of gene function in yeast by quantitative phenotypic profiling.
Molecular systems biology 2006;2():2006.0001.
-
2005: Sherlock Gavin; Ball Catherine A
Storage and retrieval of microarray data and open source microarray database software.
Molecular biotechnology 2005;30(3):239-51.
-
2005: Sherlock Gavin
Of fish and chips.
Nature methods 2005;2(5):329-30.
-
2005: Ball Catherine A; Awad Ihab A B; Demeter Janos; Gollub Jeremy; Hebert Joan M; Hernandez-Boussard Tina; Jin Heng; Matese John C; Nitzberg Michael; Wymore Farrell; Zachariah Zachariah K; Brown Patrick O; Sherlock Gavin
The Stanford Microarray Database accommodates additional microarray platforms and data formats.
Nucleic acids research 2005;33(Database issue):D580-2.
-
2005: Arnaud Martha B; Costanzo Maria C; Skrzypek Marek S; Binkley Gail; Lane Christopher; Miyasato Stuart R; Sherlock Gavin
The Candida Genome Database (CGD), a community resource for Candida albicans gene and protein information.
Nucleic acids research 2005;33(Database issue):D358-63.
-
2005: Dunn Barbara; Levine R Paul; Sherlock Gavin
Microarray karyotyping of commercial wine yeast strains reveals shared, as well as unique, genomic signatures.
BMC genomics 2005;6(1):53.
-
2004: Boyle Elizabeth I; Weng Shuai; Gollub Jeremy; Jin Heng; Botstein David; Cherry J Michael; Sherlock Gavin
GO::TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes.
Bioinformatics (Oxford, England) 2004;20(18):3710-5.
-
2004: Ball Catherine; Brazma Alvis; Causton Helen; Chervitz Steve; Edgar Ron; Hingamp Pascal; Matese John C; Icahn Carl; Parkinson Helen; Quackenbush John; Ringwald Martin; Sansone Susanna-Assunta; Sherlock Gavin; Spellman Paul; Stoeckert Christian; Tateno Yoshio; Taylor Ronald; White Joseph; Winegarden Neil;
An open letter on microarray data from the MGED Society.
Microbiology (Reading, England) 2004;150(Pt 11):3522-4.
-
2004: Awad Ihab A B; Rees Christian A; Hernandez-Boussard Tina; Ball Catherine A; Sherlock Gavin
Caryoscope: an Open Source Java application for viewing microarray data in a genomic context.
BMC bioinformatics 2004;5():151.
-
2004: Rees Christian A; Demeter Janos; Matese John C; Botstein David; Sherlock Gavin
GeneXplorer: an interactive web application for microarray data visualization and analysis.
BMC bioinformatics 2004;5():141.
-
2004: Ball Catherine A; Brazma Alvis; Causton Helen; Chervitz Steve; Edgar Ron; Hingamp Pascal; Matese John C; Parkinson Helen; Quackenbush John; Ringwald Martin; Sansone Susanna-Assunta; Sherlock Gavin; Spellman Paul; Stoeckert Chris; Tateno Yoshio; Taylor Ronald; White Joseph; Winegarden Neil
Submission of microarray data to public repositories.
PLoS biology 2004;2(9):E317.
-
2004: Ball Catherine A; Sherlock Gavin; Brazma Alvis
Funding high-throughput data sharing.
Nature biotechnology 2004;22(9):1179-83.
-
2004: Ball Catherine; Brazma Alvis; Causton Helen; Chervitz Steve; Edgar Ron; Hingamp Pascal; Matese John C; Parkinson Helen; Quackenbush John; Ringwald Martin; Sansone Susanna-Assunta; Sherlock Gavin; Spellman Paul; Stoeckert Christian; Tateno Yoshio; Taylor Ronald; White Joseph; Winegarden Neil;
Standards for microarray data: an open letter.
Environmental health perspectives 2004;112(12):A666-7.
-
2004: Sherlock Gavin
STARTing to recycle.
Nature genetics 2004;36(8):795-6.
-
2004: Spellman Paul T; Sherlock Gavin
Final words: cell age and cell cycle are unlinked.
Trends in biotechnology 2004;22(6):277-8.
-
2004: Spellman Paul T; Sherlock Gavin
Reply: whole-culture synchronization - effective tools for cell cycle studies.
Trends in biotechnology 2004;22(6):270-3.
-
2003: Killion Patrick J; Sherlock Gavin; Iyer Vishwanath R
The Longhorn Array Database (LAD): an open-source, MIAME compliant implementation of the Stanford Microarray Database (SMD).
BMC bioinformatics 2003;4():32.
-
2003: Diehn Maximilian; Sherlock Gavin; Binkley Gail; Jin Heng; Matese John C; Hernandez-Boussard Tina; Rees Christian A; Cherry J Michael; Botstein David; Brown Patrick O; Alizadeh Ash A
SOURCE: a unified genomic resource of functional annotations, ontologies, and gene expression data.
Nucleic acids research 2003;31(1):219-23.
-
2003: Gollub Jeremy; Ball Catherine A; Binkley Gail; Demeter Janos; Finkelstein David B; Hebert Joan M; Hernandez-Boussard Tina; Jin Heng; Kaloper Miroslava; Matese John C; Schroeder Mark; Brown Patrick O; Botstein David; Sherlock Gavin
The Stanford Microarray Database: data access and quality assessment tools.
Nucleic acids research 2003;31(1):94-6.
-
2003: Sherlock Gavin; Ball Catherine A
Microarray databases: storage and retrieval of microarray data.
Methods in molecular biology (Clifton, N.J.) 2003;224():235-48.
-
2002: Ball Catherine A; Sherlock Gavin; Parkinson Helen; Rocca-Sera Philippe; Brooksbank Catherine; Causton Helen C; Cavalieri Duccio; Gaasterland Terry; Hingamp Pascal; Holstege Frank; Ringwald Martin; Spellman Paul; Stoeckert Christian J; Stewart Jason E; Taylor Ronald; Brazma Alvis; Quackenbush John;
The underlying principles of scientific publication.
Bioinformatics (Oxford, England) 2002;18(11):1409.
-
2002: Ball Catherine A; Sherlock Gavin; Parkinson Helen; Rocca-Sera Philippe; Brooksbank Catherine; Causton Helen C; Cavalieri Duccio; Gaasterland Terry; Hingamp Pascal; Holstege Frank; Ringwald Martin; Spellman Paul; Stoeckert Christian J; Stewart Jason E; Taylor Ronald; Brazma Alvis; Quackenbush John;
Standards for microarray data.
Science (New York, N.Y.) 2002;298(5593):539.
-
2002: Spellman Paul T; Miller Michael; Stewart Jason; Troup Charles; Sarkans Ugis; Chervitz Steve; Bernhart Derek; Sherlock Gavin; Ball Catherine; Lepage Marc; Swiatek Marcin; Marks W L; Goncalves Jason; Markel Scott; Iordan Daniel; Shojatalab Mohammadreza; Pizarro Angel; White Joe; Hubley Robert; Deutsch Eric; Senger Martin; Aronow Bruce J; Robinson Alan; Bassett Doug; Stoeckert Christian J; Brazma Alvis
Design and implementation of microarray gene expression markup language (MAGE-ML).
Genome biology 2002;3(9):RESEARCH0046.
-
2002: Whitfield Michael L; Sherlock Gavin; Saldanha Alok J; Murray John I; Ball Catherine A; Alexander Karen E; Matese John C; Perou Charles M; Hurt Myra M; Brown Patrick O; Botstein David
Identification of genes periodically expressed in the human cell cycle and their expression in tumors.
Molecular biology of the cell 2002;13(6):1977-2000.
-
2002: Nielsen Torsten O; West Rob B; Linn Sabine C; Alter Orly; Knowling Margaret A; O'Connell John X; Zhu Shirley; Fero Mike; Sherlock Gavin; Pollack Jonathan R; Brown Patrick O; Botstein David; van de Rijn Matt
Molecular characterisation of soft tissue tumours: a gene expression study.
Lancet 2002;359(9314):1301-7.
-
2002: Dwight Selina S; Harris Midori A; Dolinski Kara; Ball Catherine A; Binkley Gail; Christie Karen R; Fisk Dianna G; Issel-Tarver Laurie; Schroeder Mark; Sherlock Gavin; Sethuraman Anand; Weng Shuai; Botstein David; Cherry J Michael
Saccharomyces Genome Database (SGD) provides secondary gene annotation using the Gene Ontology (GO).
Nucleic acids research 2002;30(1):69-72.
-
2001: Sherlock G
Analysis of large-scale gene expression data.
Briefings in bioinformatics 2001;2(4):350-62.
-
2001: Brazma A; Hingamp P; Quackenbush J; Sherlock G; Spellman P; Stoeckert C; Aach J; Ansorge W; Ball C A; Causton H C; Gaasterland T; Glenisson P; Holstege F C; Kim I F; Markowitz V; Matese J C; Parkinson H; Robinson A; Sarkans U; Schulze-Kremer S; Stewart J; Taylor R; Vilo J; Vingron M
Minimum information about a microarray experiment (MIAME)-toward standards for microarray data.
Nature genetics 2001;29(4):365-71.
-
2001: Troyanskaya O; Cantor M; Sherlock G; Brown P; Hastie T; Tibshirani R; Botstein D; Altman R B
Missing value estimation methods for DNA microarrays.
Bioinformatics (Oxford, England) 2001;17(6):520-5.
-
2001: Sherlock G; Hernandez-Boussard T; Kasarskis A; Binkley G; Matese J C; Dwight S S; Kaloper M; Weng S; Jin H; Ball C A; Eisen M B; Spellman P T; Brown P O; Botstein D; Cherry J M
The Stanford Microarray Database.
Nucleic acids research 2001;29(1):152-5.
-
2001: Ball C A; Jin H; Sherlock G; Weng S; Matese J C; Andrada R; Binkley G; Dolinski K; Dwight S S; Harris M A; Issel-Tarver L; Schroeder M; Botstein D; Cherry J M
Saccharomyces Genome Database provides tools to survey gene expression and functional analysis data.
Nucleic acids research 2001;29(1):80-1.
-
2000: Salama N; Guillemin K; McDaniel T K; Sherlock G; Tompkins L; Falkow S
A whole-genome microarray reveals genetic diversity among Helicobacter pylori strains.
Proceedings of the National Academy of Sciences of the United States of America 2000;97(26):14668-73.
-
2000: Ashburner M; Ball C A; Blake J A; Botstein D; Butler H; Cherry J M; Davis A P; Dolinski K; Dwight S S; Eppig J T; Harris M A; Hill D P; Issel-Tarver L; Kasarskis A; Lewis S; Matese J C; Richardson J E; Ringwald M; Rubin G M; Sherlock G
Gene ontology: tool for the unification of biology. The Gene Ontology Consortium.
Nature genetics 2000;25(1):25-9.
-
2000: Sherlock G
Analysis of large-scale gene expression data.
Current opinion in immunology 2000;12(2):201-5.
-
2000: Ball C A; Dolinski K; Dwight S S; Harris M A; Issel-Tarver L; Kasarskis A; Scafe C R; Sherlock G; Binkley G; Jin H; Kaloper M; Orr S D; Schroeder M; Weng S; Zhu Y; Botstein D; Cherry J M
Integrating functional genomic information into the Saccharomyces genome database.
Nucleic acids research 2000;28(1):77-80.
-
1999: Chervitz S A; Hester E T; Ball C A; Dolinski K; Dwight S S; Harris M A; Juvik G; Malekian A; Roberts S; Roe T; Scafe C; Schroeder M; Sherlock G; Weng S; Zhu Y; Cherry J M; Botstein D
Using the Saccharomyces Genome Database (SGD) for analysis of protein similarities and structure.
Nucleic acids research 1999;27(1):74-8.
-
1998: Chervitz S A; Aravind L; Sherlock G; Ball C A; Koonin E V; Dwight S S; Harris M A; Dolinski K; Mohr S; Smith T; Weng S; Cherry J M; Botstein D
Comparison of the complete protein sets of worm and yeast: orthology and divergence.
Science (New York, N.Y.) 1998;282(5396):2022-8.
-
1998: Spellman P T; Sherlock G; Zhang M Q; Iyer V R; Anders K; Eisen M B; Brown P O; Botstein D; Futcher B
Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization.
Molecular biology of the cell 1998;9(12):3273-97.
-
1994: Sherlock G; Bahman A M; Mahal A; Shieh J C; Ferreira M; Rosamond J
Molecular cloning and analysis of CDC28 and cyclin homologues from the human fungal pathogen Candida albicans.
Molecular & general genetics : MGG 1994;245(6):716-23.
-
1993: Sherlock G; Rosamond J
Starting to cycle: G1 controls regulating cell division in budding yeast.
Journal of general microbiology 1993;139(11):2531-41.
Sign-in to see more
