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Al Burlingame

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TOP 3
E D Crawford; Della C David; J E Seaman; P C Babbitt; A E Barber; Al L Burlingame; J A Wells
Conservation of caspase substrates across metazoans suggests hierarchical importance of signaling pathways over specific targets and cleavage site motifs in apoptosis.
Patricia Ruperez; Al L Burlingame; Ana Gago-Martinez; Juan A Oses-Prieto
Quantitative phosphoproteomic analysis reveals a role for serine and threonine kinases in the cytoskeletal reorganization in early T cell receptor activation in human primary T cells.
Jordane Biarc; Al L Burlingame; Robert J Chalkley; Ralph A Bradshaw
The induction of serine/threonine protein phosphorylations by a PDGFR/TrkA chimera in stably transfected PC12 cells.

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2012: E D Crawford; Della C David; J E Seaman; P C Babbitt; A E Barber; Al L Burlingame; J A Wells
Conservation of caspase substrates across metazoans suggests hierarchical importance of signaling pathways over specific targets and cleavage site motifs in apoptosis.
Cell death and differentiation 2012;19(12):2040-8.
2012: Patricia Ruperez; Al L Burlingame; Ana Gago-Martinez; Juan A Oses-Prieto
Quantitative phosphoproteomic analysis reveals a role for serine and threonine kinases in the cytoskeletal reorganization in early T cell receptor activation in human primary T cells.
Molecular & cellular proteomics : MCP 2012;11(5):171-86.
2012: Jordane Biarc; Al L Burlingame; Robert J Chalkley; Ralph A Bradshaw
The induction of serine/threonine protein phosphorylations by a PDGFR/TrkA chimera in stably transfected PC12 cells.
Molecular & cellular proteomics : MCP 2012;11(5):15-30.
2010: Tao Su; David M Bryant; Frédéric Luton; Marcel Vergés; Scott M Ulrich; Kirk Hansen; Anirban Datta; Dennis J Eastburn; Al L Burlingame; Kevan M Shokat; Keith E Mostov
A kinase cascade leading to Rab11-FIP5 controls transcytosis of the polymeric immunoglobulin receptor.
Nature cell biology 2010;12(12):1143-53.
2010: Michael J Trnka; Al L Burlingame
Topographic studies of the GroEL-GroES chaperonin complex by chemical cross-linking using diformyl ethynylbenzene: the power of high resolution electron transfer dissociation for determination of both peptide sequences and their attachment sites.
Molecular & cellular proteomics : MCP 2010;9(10):2306-17.
2010: María Lorena Falcone Ferreyra; Alejandro Pezza; Jordane Biarc; Al L Burlingame; P Casati
Plant L10 ribosomal proteins have different roles during development and translation under ultraviolet-B stress.
Plant physiology 2010;153(4):1878-94.
2010: Robert J Chalkley; Katalin F Medzihradszky; A J Lynn; P R Baker; Al L Burlingame
Statistical analysis of Peptide electron transfer dissociation fragmentation mass spectrometry.
Analytical chemistry 2010;82(2):579-84.
2010: Della C David; Noah Ollikainen; Jonathan C Trinidad; Michael P Cary; Al L Burlingame; Cynthia Kenyon
Widespread protein aggregation as an inherent part of aging in C. elegans.
PLoS biology 2010;8(8):e1000450.
2009: Robert J Chalkley; Agnes Thalhammer; Ralf Schoepfer; Al L Burlingame
Identification of protein O-GlcNAcylation sites using electron transfer dissociation mass spectrometry on native peptides.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(22):8894-9.
2008: Robert J Chalkley; Peter R Baker; Katalin F Medzihradszky; Aenoch J Lynn; Al L Burlingame
In-depth analysis of tandem mass spectrometry data from disparate instrument types.
Molecular & cellular proteomics : MCP 2008;7(12):2386-98.
2008: Jan Hirsch; Claus U Niemann; Kirk Hansen; Soojinna Choi; Xiao Su; James Frank; Xiaohui Fang; Ryutaro Hirose; Pierre Theodore; Anil Sapru; Al L Burlingame; Michael A Matthay
Alterations in the proteome of pulmonary alveolar type II cells in the rat after hepatic ischemia-reperfusion.
Critical care medicine 2008;36(6):1846-54.
2008: P Casati; Mabel Campi; Feixia Chu; Nagi Suzuki; David Maltby; Shenheng Guan; Al L Burlingame; Virginia Walbot
Histone acetylation and chromatin remodeling are required for UV-B-dependent transcriptional activation of regulated genes in maize.
The Plant cell 2008;20(4):827-42.
2008: Wenqiang Tang; Zhiping Deng; Juan A Oses-Prieto; Nagi Suzuki; Shengwei Zhu; Xin Zhang; Al L Burlingame; Zhi-Yong Wang
Proteomics studies of brassinosteroid signal transduction using prefractionation and two-dimensional DIGE.
Molecular & cellular proteomics : MCP 2008;7(4):728-38.
2008: Jonathan C Trinidad; Agnes Thalhammer; Christian G Specht; Aenoch J Lynn; Peter R Baker; Ralf Schoepfer; Al L Burlingame
Quantitative analysis of synaptic phosphorylation and protein expression.
Molecular & cellular proteomics : MCP 2008;7(4):684-96.
2008: Motohiro Tomizawa; Al L Burlingame; Kathleen A Durkin; David A Maltby; Katalin F Medzihradszky; Todd Talley; Palmer Taylor; John E Casida
Atypical nicotinic agonist bound conformations conferring subtype selectivity.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(5):1728-32.
2008: Ziyin Li; Ju Huck Lee; Feixia Chu; Al L Burlingame; Arthur Günzl; Ching C Wang
Identification of a novel chromosomal passenger complex and its unique localization during cytokinesis in Trypanosoma brucei.
PloS one 2008;3(6):e2354.
2007: Tobias C Walther; Pablo S Aguilar; Florian Fröhlich; Feixia Chu; Karen Moreira; Al L Burlingame; Peter Walter
Pkh-kinases control eisosome assembly and organization.
The EMBO journal 2007;26(24):4946-55.
2007: Zhiping Deng; Xin Zhang; Wenqiang Tang; Juan A Oses-Prieto; Nagi Suzuki; Joshua M Gendron; Huanjing Chen; Shenheng Guan; Robert J Chalkley; T Kaye Peterman; Al L Burlingame; Zhi-Yong Wang
A proteomics study of brassinosteroid response in Arabidopsis.
Molecular & cellular proteomics : MCP 2007;6(12):2058-71.
2007: Demetris C Iacovides; Clodagh C. O'Shea; Juan Oses-Prieto; Al L Burlingame; Frank McCormick
Critical role for arginine methylation in adenovirus-infected cells.
Journal of virology 2007;81(23):13209-17.
2007: Olav Olsen; Lars Funke; Jia-fu Long; Masaki Fukata; Toshinari Kazuta; Jonathan C Trinidad; Kimberly A Moore; Hidemi Misawa; Fang Liang; Al L Burlingame; Mingjie Zhang; David S Bredt
Renal defects associated with improper polarization of the CRB and DLG polarity complexes in MALS-3 knockout mice.
The Journal of cell biology 2007;179(1):151-64.
2007: Katalin F Medzihradszky; Shenheng Guan; David A Maltby; Al L Burlingame
Sulfopeptide fragmentation in electron-capture and electron-transfer dissociation.
Journal of the American Society for Mass Spectrometry 2007;18(9):1617-24.
2007: Srinivas Gampala; Tae-Wuk Kim; Jun-Xian He; Wenqiang Tang; Zhiping Deng; Mingyi-Yi Bai; Shenheng Guan; Sylvie Lalonde; Ying Sun; Joshua M Gendron; Huanjing Chen; Nakako Shibagaki; Robert J Ferl; David W Ehrhardt; Kang Chong; Al L Burlingame; Zhi-Yong Wang
An essential role for 14-3-3 proteins in brassinosteroid signal transduction in Arabidopsis.
Developmental cell 2007;13(2):177-89.
2007: Motohiro Tomizawa; Nanjing Zhang; Al L Burlingame; Kathleen A Durkin; David A Maltby; Katalin F Medzihradszky; Jack Presley; Todd Talley; Palmer Taylor; John E Casida
Defining nicotinic agonist binding surfaces through photoaffinity labeling.
Biochemistry 2007;46(30):8798-806.
2007: Jasmina J Allen; Manqing Li; Craig S Brinkworth; Jennifer L Paulson; Dan Wang; Anette Hübner; Wen-Hai Chou; Roger J Davis; Al L Burlingame; Robert O Messing; Carol D Katayama; Stephen M Hedrick; Kevan M Shokat
A semisynthetic epitope for kinase substrates.
Nature methods 2007;4(6):511-6.
2007: Motohiro Tomizawa; Al L Burlingame; Kathleen A Durkin; David A Maltby; Katalin F Medzihradszky; Todd Talley; Palmer Taylor; John E Casida
Mapping the elusive neonicotinoid binding site.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(21):9075-80.
2007: Jan Hirsch; Kirk Hansen; Anil Sapru; James Frank; Robert J Chalkley; Xiaohui Fang; Jonathan C Trinidad; Peter Baker; Al L Burlingame; Michael A Matthay
Impact of low and high tidal volumes on the rat alveolar epithelial type II cell proteome.
American journal of respiratory and critical care medicine 2007;175(10):1006-13.
2007: Alison Maloney; Paul A Clarke; Soren Naaby-Hansen; Rob Stein; Jens Koopm,ann; Akunna Akpan; Alice Yang; Marketa Zvelebil; Rainer Cramer; Lindsay Stimson; Wynne Aherne; Udai Banerji; Ian Judson; Swee Sharp; Marissa Powers; Emmanuel deBilly; Joanne Salmons; Michael Walton; Al L Burlingame; Michael D Waterfield; Paul Workman
Gene and protein expression profiling of human ovarian cancer cells treated with the heat shock protein 90 inhibitor 17-allylamino-17-demethoxygeldanamycin.
Cancer research 2007;67(7):3239-53.
2007: Matthew D Simon; Feixia Chu; Lisa R Racki; Cecile C de la Cruz; Al L Burlingame; Barbara Panning; Geeta J Narlikar; Kevan M Shokat
The site-specific installation of methyl-lysine analogs into recombinant histones.
Cell 2007;128(5):1003-12.
2007: Juan Antonio Osés-Prieto; Xin Zhang; Al L Burlingame
Formation of epsilon-formyllysine on silver-stained proteins: implications for assignment of isobaric dimethylation sites by tandem mass spectrometry.
Molecular & cellular proteomics : MCP 2007;6(2):181-92.
2006: R J Chalkley; C S Brinkworth; Al L Burlingame
Side-chain fragmentation of alkylated cysteine residues in electron capture dissociation mass spectrometry.
Journal of the American Society for Mass Spectrometry 2006;17(9):1271-4.
2006: Feixia Chu; Sami Mahrus; Charles S Craik; Al L Burlingame
Isotope-coded and affinity-tagged cross-linking (ICATXL): an efficient strategy to probe protein interaction surfaces.
Journal of the American Chemical Society 2006;128(32):10362-3.
2006: Maria C Prieto Conway; Randy M Whittal; Michael A Baldwin; Al L Burlingame; Rod Balhorn
Electrospray mass spectrometry of NeuAc oligomers associated with the C fragment of the tetanus toxin.
Journal of the American Society for Mass Spectrometry 2006;17(7):967-76.
2006: Qin Zhou; Monique Cadrin; Harald Herrmann; Che-Hong Chen; Robert J Chalkley; Al L Burlingame; Bishr Omary
Keratin 20 serine 13 phosphorylation is a stress and intestinal goblet cell marker.
The Journal of biological chemistry 2006;281(24):16453-61.
2006: Feixia Chu; Jason C Maynard; Gabriela Chiosis; Christopher V Nicchitta; Al L Burlingame
Identification of novel quaternary domain interactions in the Hsp90 chaperone, GRP94.
Protein science : a publication of the Protein Society 2006;15(6):1260-9.
2006: Jan Hirsch; Kirk Hansen; Soojinna Choi; Joonhwa Noh; Ryutaro Hirose; John P Roberts; Michael A Matthay; Al L Burlingame; Jacquelyn J Maher; Claus U Niemann
Warm ischemia-induced alterations in oxidative and inflammatory proteins in hepatic Kupffer cells in rats.
Molecular & cellular proteomics : MCP 2006;5(6):979-86.
2006: J Recht; T Tsubota; Jason Tanny; Robert L Diaz; James M Berger; X Zhang; Benjamin A Garcia; Jeffrey Shabanowitz; Al L Burlingame; Donald F Hunt; Paul D Kaufman; C David Allis
Histone chaperone Asf1 is required for histone H3 lysine 56 acetylation, a modification associated with S phase in mitosis and meiosis.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(18):6988-93.
2006: Ralph A Bradshaw; Al L Burlingame; Steven Carr; Ruedi Aebersold
Reporting protein identification data: the next generation of guidelines.
Molecular & cellular proteomics : MCP 2006;5(5):787-8.
2006: Keith Vosseller; Jonathan C Trinidad; Robert J Chalkley; Christian G Specht; Agnes Thalhammer; Aenoch J Lynn; June O Snedecor; Shenheng Guan; Katalin F Medzihradszky; David A Maltby; Ralf Schoepfer; Al L Burlingame
O-linked N-acetylglucosamine proteomics of postsynaptic density preparations using lectin weak affinity chromatography and mass spectrometry.
Molecular & cellular proteomics : MCP 2006;5(5):923-34.
2006: Jonathan C Trinidad; Christian G Specht; Agnes Thalhammer; Ralf Schoepfer; Al L Burlingame
Comprehensive identification of phosphorylation sites in postsynaptic density preparations.
Molecular & cellular proteomics : MCP 2006;5(5):914-22.
2006: Pablo Rodriguez-Viciana; Juan Oses-Prieto; Al L Burlingame; Mike Fried; Frank McCormick
A phosphatase holoenzyme comprised of Shoc2/Sur8 and the catalytic subunit of PP1 functions as an M-Ras effector to modulate Raf activity.
Molecular cell 2006;22(2):217-30.
2006: Connie R Jiménez; Sabine Spijker; Simone de Schipper; Johannes C Lodder; Cornelis Kees Janse; Wijnand P M Geraerts; Jan van Minnen; Naweed I Syed; Al L Burlingame; August B Smit; KaWan Li
Peptidomics of a single identified neuron reveals diversity of multiple neuropeptides with convergent actions on cellular excitability.
The Journal of neuroscience : the official journal of the Society for Neuroscience 2006;26(2):518-29.
2006: Feixia Chu; Dmitri A Nusinow; Robert J Chalkley; Kathrin Plath; Barbara Panning; Al L Burlingame
Mapping post-translational modifications of the histone variant MacroH2A1 using tandem mass spectrometry.
Molecular & cellular proteomics : MCP 2006;5(1):194-203.
2005: Bonnie K Baxter; Hagai Abeliovich; Xin Zhang; Aline G Stirling; Al L Burlingame; David S Goldfarb
Atg19p ubiquitination and the cytoplasm to vacuole trafficking pathway in yeast.
The Journal of biological chemistry 2005;280(47):39067-76.
2005: Paula Casati; Xing Zhang; Al L Burlingame; Virginia Walbot
Analysis of leaf proteome after UV-B irradiation in maize lines differing in sensitivity.
Molecular & cellular proteomics : MCP 2005;4(11):1673-85.
2005: Olav Olsen; Kimberly A Moore; Masaki Fukata; Toshinari Kazuta; Jonathan C Trinidad; Fred W Kauer; Michel Streuli; Hidemi Misawa; Al L Burlingame; Roger A Nicoll; David S Bredt
Neurotransmitter release regulated by a MALS-liprin-alpha presynaptic complex.
The Journal of cell biology 2005;170(7):1127-34.
2005: Ralph A Bradshaw; Al L Burlingame; Steve Carr; Ruedi Aebersold
Protein identification: the good, the bad, and the ugly.
Molecular & cellular proteomics : MCP 2005;4(9):1221-2.
2005: Al L Burlingame; Xin Zhang; Robert J Chalkley
Mass spectrometric analysis of histone posttranslational modifications.
Methods (San Diego, Calif.) 2005;36(4):383-94.
2005: Robert J Chalkley; Peter R Baker; Lan Huang; Kirk Hansen; Nadia P C Allen; Michael Rexach; Al L Burlingame
Comprehensive analysis of a multidimensional liquid chromatography mass spectrometry dataset acquired on a quadrupole selecting, quadrupole collision cell, time-of-flight mass spectrometer: II. New developments in Protein Prospector allow for reliable and comprehensive automatic analysis of large datasets.
Molecular & cellular proteomics : MCP 2005;4(8):1194-204.
2005: Robert J Chalkley; Peter R Baker; Kirk Hansen; Katalin F Medzihradszky; Nadia P C Allen; Michael Rexach; Al L Burlingame
Comprehensive analysis of a multidimensional liquid chromatography mass spectrometry dataset acquired on a quadrupole selecting, quadrupole collision cell, time-of-flight mass spectrometer: I. How much of the data is theoretically interpretable by search engines?
Molecular & cellular proteomics : MCP 2005;4(8):1189-93.
2005: Joanna Wysocka; Tomek Swigut; Thomas A Milne; Yali Dou; Xin Zhang; Al L Burlingame; Robert G Roeder; Ali H Brivanlou; C David Allis
WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development.
Cell 2005;121(6):859-72.
2005: Yuko Fukata; Anastassios V Tzingounis; Jonathan C Trinidad; Masaki Fukata; Al L Burlingame; Roger A Nicoll; David S Bredt
Molecular constituents of neuronal AMPA receptors.
The Journal of cell biology 2005;169(3):399-404.
2005: Masahiro Tanaka; Raynard Bateman; Daniel Rauh; Eugeni A Vaisberg; Shyam Ramachandani; Chao Zhang; Kirk Hansen; Al L Burlingame; Jay K Trautman; Kevan M Shokat; Cynthia L Adams
An unbiased cell morphology-based screen for new, biologically active small molecules.
PLoS biology 2005;3(5):e128.
2005: Michelle Trester-Zedlitz; Al L Burlingame; Brian Kobilka; Mark von Zastrow
Mass spectrometric analysis of agonist effects on posttranslational modifications of the beta-2 adrenoceptor in mammalian cells.
Biochemistry 2005;44(16):6133-43.
2005: Ralph A Bradshaw; Al L Burlingame
From proteins to proteomics.
IUBMB life 2005;57(4-5):267-72.
2005: Jonathan C Trinidad; Agnes Thalhammer; Christian G Specht; Ralf Schoepfer; Al L Burlingame
Phosphorylation state of postsynaptic density proteins.
Journal of neurochemistry 2005;92(6):1306-16.
2005: Keith Vosseller; Kirk Hansen; Robert J Chalkley; Jonathan C Trinidad; Robert Lance Wells; Gerald W Hart; Al L Burlingame
Quantitative analysis of both protein expression and serine / threonine post-translational modifications through stable isotope labeling with dithiothreitol.
Proteomics 2005;5(2):388-98.
2005: Diana M Smith-Beckerman; Kit W Fung; Katherine E Williams; Nelly Auersperg; Andrew K Godwin; Al L Burlingame
Proteome changes in ovarian epithelial cells derived from women with BRCA1 mutations and family histories of cancer.
Molecular & cellular proteomics : MCP 2005;4(2):156-68.
2005: Lan Huang; Al L Burlingame
Comprehensive mass spectrometric analysis of the 20S proteasome complex.
Methods in enzymology 2005;405():187-236.
2005: Pedro Cutillas; Juerg Biber; Joanne Marks; Richard Jacob; Bruno Stieger; Richard Jacob; Michael D Waterfield; Al L Burlingame; Robert J Unwin
Proteomic analysis of plasma membrane vesicles isolated from the rat renal cortex.
Proteomics 2005;5(1):101-12.
2004: Feixia Chu; Shu-ou Shan; Demetri T Moustakas; Frank Alber; Pascal F Egea; Robert M Stroud; Peter Walter; Al L Burlingame
Unraveling the interface of signal recognition particle and its receptor by using chemical cross-linking and tandem mass spectrometry.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(47):16454-9.
2004: Katalin F Medzihradszky; Xin Zhang; Robert J Chalkley; Shenheng Guan; M A McFarland; Michael J Chalmers; A G Marshall; Robert L Diaz; C David Allis; Al L Burlingame
Characterization of Tetrahymena histone H2B variants and posttranslational populations by electron capture dissociation (ECD) Fourier transform ion cyclotron mass spectrometry (FT-ICR MS).
Molecular & cellular proteomics : MCP 2004;3(9):872-86.
2004: Pedro Cutillas; Robert J Chalkley; Kirk Hansen; Rainer Cramer; Anthony G W Norden; Michael D Waterfield; Al L Burlingame; Robert J Unwin
The urinary proteome in Fanconi syndrome implies specificity in the reabsorption of proteins by renal proximal tubule cells.
American journal of physiology. Renal physiology 2004;287(3):F353-64.
2004: Marcel Vergés; Frédéric Luton; Carmen Gruber; Frank Tiemann; Lorri G Reinders; Lan Huang; Al L Burlingame; Carol R Haft; Keith E Mostov
The mammalian retromer regulates transcytosis of the polymeric immunoglobulin receptor.
Nature cell biology 2004;6(8):763-9.
2004: Jan Hirsch; Kirk Hansen; Al L Burlingame; Michael A Matthay
Proteomics: current techniques and potential applications to lung disease.
American journal of physiology. Lung cellular and molecular physiology 2004;287(1):L1-23.
2004: Pedro Cutillas; Al L Burlingame; Robert Unwin
Proteomic strategies and their application in studies of renal function.
News in physiological sciences : an international journal of physiology produced jointly by the International Union of Physiological Sciences and the American Physiological Society 2004;19():114-9.
2004: Steven Carr; Ruedi Aebersold; Michael Baldwin; Al L Burlingame; Karl Clauser; Alexey I Nesvizhskii
The need for guidelines in publication of peptide and protein identification data: Working Group on Publication Guidelines for Peptide and Protein Identification Data.
Molecular & cellular proteomics : MCP 2004;3(6):531-3.
2004: Yuko Oda; Carina Sihlbom; Robert J Chalkley; Lan Huang; Christophe Rachez; Chao-Pei Betty Chang; Al L Burlingame; Leonard P Freedman; Daniel David Bikle
Two distinct coactivators, DRIP/mediator and SRC/p160, are differentially involved in VDR transactivation during keratinocyte differentiation.
The Journal of steroid biochemistry and molecular biology 2004;89-90(1-5):273-6.
2004: Connie R Jiménez; Andries ter Maat; Anton W Pieneman; Al L Burlingame; August B Smit; Ka Wan Li
Spatio-temporal dynamics of the egg-laying-inducing peptides during an egg-laying cycle: a semiquantitative matrix-assisted laser desorption/ionization mass spectrometry approach.
Journal of neurochemistry 2004;89(4):865-75.
2004: Eran Perlson; Katalin F Medzihradszky; Zsuzsanna Darula; David W Munno; Naweed I Syed; Al L Burlingame; Mike Fainzilber
Differential proteomics reveals multiple components in retrogradely transported axoplasm after nerve injury.
Molecular & cellular proteomics : MCP 2004;3(5):510-20.
2004: Katalin F Medzihradszky; Zsuzsanna Darula; Eran Perlson; Mike Fainzilber; Robert J Chalkley; Haydn Ball; Doron C Greenbaum; Matthew Bogyo; Darren R Tyson; Ralph A Bradshaw; Al L Burlingame
O-sulfonation of serine and threonine: mass spectrometric detection and characterization of a new posttranslational modification in diverse proteins throughout the eukaryotes.
Molecular & cellular proteomics : MCP 2004;3(5):429-40.
2004: Eran Perlson; Shlomit Hanz; Katalin F Medzihradszky; Al L Burlingame; Mike Fainzilber
From snails to sciatic nerve: Retrograde injury signaling from axon to soma in lesioned neurons.
Journal of neurobiology 2004;58(2):287-94.
2004: Brian Y Ishida; Kathy R Bailey; Keith G Duncan; Robert J Chalkley; Al L Burlingame; John P Kane; Daniel M Schwartz
Regulated expression of apolipoprotein E by human retinal pigment epithelial cells.
Journal of lipid research 2004;45(2):263-71.
2004: Richard Jacob; Nathanael S Gray; Young-Tae Chang; Lolita Juarez; Richard Jacob; Al L Burlingame; Peter G Schultz; Rebecca Heald
Identification of a novel protein regulating microtubule stability through a chemical approach.
Chemistry & biology 2004;11(1):135-46.
2004: Pedro Cutillas; Anthony G W Norden; Rainer Cramer; Al L Burlingame; Robert J Unwin
Urinary proteomics of renal Fanconi syndrome.
Contributions to nephrology 2004;141():155-69.
2003: Yuko Oda; Carina Sihlbom; Robert J Chalkley; Lan Huang; Christophe Rachez; Chao-Pei Betty Chang; Al L Burlingame; Leonard P Freedman; Daniel David Bikle
Two distinct coactivators, DRIP/mediator and SRC/p160, are differentially involved in vitamin D receptor transactivation during keratinocyte differentiation.
Molecular endocrinology (Baltimore, Md.) 2003;17(11):2329-39.
2003: Al L Burlingame
Toward deciphering the knowledge encrypted in large datasets.
Molecular & cellular proteomics : MCP 2003;2(7):425.
2003: Leila Kotite; L-H Zhang; Z Yu; Al L Burlingame; Richard J Havel
Human apoC-IV: isolation, characterization, and immunochemical quantification in plasma and plasma lipoproteins.
Journal of lipid research 2003;44(7):1387-94.
2003: Kirk Hansen; Gerold Schmitt-Ulms; Robert J Chalkley; Jan Hirsch; Michael A Baldwin; Al L Burlingame
Mass spectrometric analysis of protein mixtures at low levels using cleavable 13C-isotope-coded affinity tag and multidimensional chromatography.
Molecular & cellular proteomics : MCP 2003;2(5):299-314.
2003: Pedro Cutillas; Anthony G W Norden; Rainer Cramer; Al L Burlingame; Robert J Unwin
Detection and analysis of urinary peptides by on-line liquid chromatography and mass spectrometry: application to patients with renal Fanconi syndrome.
Clinical science (London, England : 1979) 2003;104(5):483-90.
2003: Robert J Chalkley; Al L Burlingame
Identification of novel sites of O-N-acetylglucosamine modification of serum response factor using quadrupole time-of-flight mass spectrometry.
Molecular & cellular proteomics : MCP 2003;2(3):182-90.
2002: Nadia P C Allen; Samir S Patel; Lan Huang; Robert J Chalkley; Al L Burlingame; Malik Lutzmann; Eduard C Hurt; Michael Rexach
Deciphering networks of protein interactions at the nuclear pore complex.
Molecular & cellular proteomics : MCP 2002;1(12):930-46.
2002: Katherine E Williams; Tonya A Carver; J J L Miranda; Antti Kautiainen; John S Vogel; Karen H Dingley; Michael A Baldwin; Kenneth W Turteltaub; Al L Burlingame
Attomole detection of in vivo protein targets of benzene in mice: evidence for a highly reactive metabolite.
Molecular & cellular proteomics : MCP 2002;1(11):885-95.
2002: Sarah Hart; Michael D Waterfield; Al L Burlingame; Rainer Cramer
Factors governing the solubilization of phosphopeptides retained on ferric NTA IMAC beads and their analysis by MALDI TOFMS.
Journal of the American Society for Mass Spectrometry 2002;13(9):1042-51.
2002: David B Hawkes; Gregory W Adams; Al L Burlingame; Paul R. Ortiz de Montellano; James J De Voss
Cytochrome P450(cin) (CYP176A), isolation, expression, and characterization.
The Journal of biological chemistry 2002;277(31):27725-32.
2002: Kangling Zhang; Hui Tang; Lan Huang; James W Blankenship; Patrick R Jones; Fan Xiang; Peter M Yau; Al L Burlingame
Identification of acetylation and methylation sites of histone H3 from chicken erythrocytes by high-accuracy matrix-assisted laser desorption ionization-time-of-flight, matrix-assisted laser desorption ionization-postsource decay, and nanoelectrospray ionization tandem mass spectrometry.
Analytical biochemistry 2002;306(2):259-69.
2002: Kangling Zhang; Katherine E Williams; Lan Huang; Peter M Yau; Joseph S Siino; E Morton Bradbury; Patrick R Jones; Michael J Minch; Al L Burlingame
Histone acetylation and deacetylation: identification of acetylation and methylation sites of HeLa histone H4 by mass spectrometry.
Molecular & cellular proteomics : MCP 2002;1(7):500-8.
2002: Silvio M Zanata; Marilene H Lopes; Adriana F Mercadante; Glaucia N M Hajj; Luciana B Chiarini; Regina Nomizo; Adriana R O Freitas; Ana L B Cabral; Kil S Lee; Maria A Juliano; Elizabeth de Oliveira; Saul G Jachieri; Al L Burlingame; Lan Huang; Rafael Linden; Ricardo R Brentani; Vilma Martins
Stress-inducible protein 1 is a cell surface ligand for cellular prion that triggers neuroprotection.
The EMBO journal 2002;21(13):3307-16.
2002: Lan Huang; Michael A Baldwin; David A Maltby; Katalin F Medzihradszky; Peter R Baker; Nadia Allen; Michael Rexach; Ricky D Edmondson; Jennifer Campbell; Peter Juhasz; Steven A Martin; Marvin L Vestal; Al L Burlingame
The identification of protein-protein interactions of the nuclear pore complex of Saccharomyces cerevisiae using high throughput matrix-assisted laser desorption ionization time-of-flight tandem mass spectrometry.
Molecular & cellular proteomics : MCP 2002;1(6):434-50.
2002: Jenny Michels; Armin Geyer; Viorel Mocanu; Wolfram Welte; Al L Burlingame; Michael Przybylski
Structure and functional characterization of the periplasmic N-terminal polypeptide domain of the sugar-specific ion channel protein (ScrY porin).
Protein science : a publication of the Protein Society 2002;11(6):1565-74.
2002: Silvia Benvenuti; Rainer Cramer; Christopher C Quinn; Jim Bruce; Marketa Zvelebil; Steve Corless; Jacquelyn Bond; Alice Yang; Susan Hockfield; Al L Burlingame; Michael D Waterfield; Parmjit S Jat
Differential proteome analysis of replicative senescence in rat embryo fibroblasts.
Molecular & cellular proteomics : MCP 2002;1(4):280-92.
2002: Bin Liu; Lan Huang; Carina Sihlbom; Al L Burlingame; James D Marks
Towards proteome-wide production of monoclonal antibody by phage display.
Journal of molecular biology 2002;315(5):1063-73.
2002: Doron C Greenbaum; Amos Baruch; Linda Hayrapetian; Zsuzsanna Darula; Al L Burlingame; Katalin F Medzihradszky; Matthew Bogyo
Chemical approaches for functionally probing the proteome.
Molecular & cellular proteomics : MCP 2002;1(1):60-8.
2001: R J Chalkley; Al L Burlingame
Identification of GlcNAcylation sites of peptides and alpha-crystallin using Q-TOF mass spectrometry.
Journal of the American Society for Mass Spectrometry 2001;12(10):1106-13.
2001: Nadia P C Allen; Lan Huang; Al L Burlingame; Michael Rexach
Proteomic analysis of nucleoporin interacting proteins.
The Journal of biological chemistry 2001;276(31):29268-74.
2001: M D Person; Kathlynn Brown; Sami Mahrus; Charles S Craik; Al L Burlingame
Novel inter-protein cross-link identified in the GGH-ecotin D137Y dimer.
Protein science : a publication of the Protein Society 2001;10(8):1549-62.
2001: Lan Huang; Richard Jacob; Scott C-H Pegg; Michael A Baldwin; Ching C Wang; Al L Burlingame; Patricia C Babbitt
Functional assignment of the 20 S proteasome from Trypanosoma brucei using mass spectrometry and new bioinformatics approaches.
The Journal of biological chemistry 2001;276(30):28327-39.
2001: Hasem Habelhah; K Shah; L Huang; Al L Burlingame; Kevan M Shokat; Ze'ev Ronai
Identification of new JNK substrate using ATP pocket mutant JNK and a corresponding ATP analogue.
The Journal of biological chemistry 2001;276(21):18090-5.
2001: C R Jiménez; L Huang; Y Qiu; Al L Burlingame
Enzymatic approaches for obtaining amino acid sequence: on-target ladder sequencing.
Current protocols in protein science / editorial board, John E. Coligan ... [et al.] 2001;Chapter 16():Unit 16.7.
2001: C R Jiménez; L Huang; Y Qiu; Al L Burlingame
Searching sequence databases over the internet: protein identification using MS-tag.
Current protocols in protein science / editorial board, John E. Coligan ... [et al.] 2001;Chapter 16():Unit 16.6.
2001: C R Jiménez; L Huang; Y Qiu; Al L Burlingame
Searching sequence databases over the internet: protein identification using MS-Fit.
Current protocols in protein science / editorial board, John E. Coligan ... [et al.] 2001;Chapter 16():Unit 16.5.
2001: C R Jiménez; L Huang; Y Qiu; Al L Burlingame
In-gel digestion of proteins for MALDI-MS fingerprint mapping.
Current protocols in protein science / editorial board, John E. Coligan ... [et al.] 2001;Chapter 16():Unit 16.4.
2001: C R Jiménez; L Huang; Y Qiu; Al L Burlingame
Sample preparation for MALDI mass analysis of peptides and proteins.
Current protocols in protein science / editorial board, John E. Coligan ... [et al.] 2001;Chapter 16():Unit 16.3.
2001: Michael A Baldwin; Katalin F Medzihradszky; C M Lock; B Fisher; T A Settineri; Al L Burlingame
Matrix-assisted laser desorption/ionization coupled with quadrupole/orthogonal acceleration time-of-flight mass spectrometry for protein discovery, identification, and structural analysis.
Analytical chemistry 2001;73(8):1707-20.
2001: V M Hoang; Russell A Foulk; K Clauser; Al L Burlingame; B W Gibson; Susan J Fisher
Functional proteomics: examining the effects of hypoxia on the cytotrophoblast protein repertoire.
Biochemistry 2001;40(13):4077-86.
2001: A G Polson; L Huang; David M Lukac; Justin D Blethrow; David O Morgan; Al L Burlingame; Don Ganem
Kaposi's sarcoma-associated herpesvirus K-bZIP protein is phosphorylated by cyclin-dependent kinases.
Journal of virology 2001;75(7):3175-84.
2001: Hasem Habelhah; Keerti V Shah; L Huang; A Ostareck-Lederer; Al L Burlingame; Kevan M Shokat; M W Hentze; Ze'ev Ronai
ERK phosphorylation drives cytoplasmic accumulation of hnRNP-K and inhibition of mRNA translation.
Nature cell biology 2001;3(3):325-30.
2001: K F Medzihradszky; H Leffler; Michael A Baldwin; Al L Burlingame
Protein identification by in-gel digestion, high-performance liquid chromatography, and mass spectrometry: peptide analysis by complementary ionization techniques.
Journal of the American Society for Mass Spectrometry 2001;12(2):215-21.
2001: Y Qiu; L Z Benet; Al L Burlingame
Identification of hepatic protein targets of the reactive metabolites of the non-hepatotoxic regioisomer of acetaminophen, 3'-hydroxyacetanilide, in the mouse in vivo using two-dimensional gel electrophoresis and mass spectrometry.
Advances in experimental medicine and biology 2001;500():663-73.
2000: Doron C Greenbaum; Katalin F Medzihradszky; Al L Burlingame; Matthew Bogyo
Epoxide electrophiles as activity-dependent cysteine protease profiling and discovery tools.
Chemistry & biology 2000;7(8):569-81.
2000: Randy M Whittal; Christopher C Benz; G Scott; J Semyonov; Al L Burlingame; Michael A Baldwin
Preferential oxidation of zinc finger 2 in estrogen receptor DNA-binding domain prevents dimerization and, hence, DNA binding.
Biochemistry 2000;39(29):8406-17.
2000: Timothy L Williamson; LB Corson; L Huang; Al L Burlingame; J Liu; Lucie I Bruijn; Don W Cleveland
Toxicity of ALS-linked SOD1 mutants.
Science (New York, N.Y.) 2000;288(5465):399.
2000: V V Laiko; Michael A Baldwin; Al L Burlingame
Atmospheric pressure matrix-assisted laser desorption/ionization mass spectrometry.
Analytical chemistry 2000;72(4):652-7.
2000: Randy M Whittal; Haydn L Ball; Fred Cohen; Al L Burlingame; Stanley B Prusiner; Michael A Baldwin
Copper binding to octarepeat peptides of the prion protein monitored by mass spectrometry.
Protein science : a publication of the Protein Society 2000;9(2):332-43.
2000: Katalin F Medzihradszky; J M Campbell; Michael A Baldwin; Arnold M Falick; Peter Juhasz; Marvin L Vestal; Al L Burlingame
The characteristics of peptide collision-induced dissociation using a high-performance MALDI-TOF/TOF tandem mass spectrometer.
Analytical chemistry 2000;72(3):552-8.
2000: W W Chang; L Huang; M Shen; C Webster; Al L Burlingame; Justin K M Roberts
Patterns of protein synthesis and tolerance of anoxia in root tips of maize seedlings acclimated to a low-oxygen environment, and identification of proteins by mass spectrometry.
Plant physiology 2000;122(2):295-318.
2000: Rainer Cramer; Al L Burlingame
Employing target modifications for the investigation of liquid infrared matrix-assisted laser desorption/ionization mass spectrometry.
Rapid communications in mass spectrometry : RCM 2000;14(2):53-60.
1999: Yi Yao; C R Toth; Lan Huang; M L Wong; P Dias; Al L Burlingame; Philip Coffino; Ching C Wang
alpha5 subunit in Trypanosoma brucei proteasome can self-assemble to form a cylinder of four stacked heptamer rings.
The Biochemical journal 1999;344 Pt 2():349-58.
1999: Yi Yao; Lan Huang; AN Krutchinsky; M L Wong; K G Standing; Al L Burlingame; Ching C Wang
Structural and functional characterizations of the proteasome-activating protein PA26 from Trypanosoma brucei.
The Journal of biological chemistry 1999;274(48):33921-30.
1999: Alessandra Bossi; MJ Patel; E J Webb; M A Baldwin; Richard Jacob; Al L Burlingame; Pier Giorgio Righetti
Analysis of cross-linked human hemoglobin by conventional isoelectric focusing, immobilized pH gradients, capillary electrophoresis, and mass spectrometry.
Electrophoresis 1999;20(14):2810-7.
1999: Lan Huang; M Shen; I Chernushevich; Al L Burlingame; Ching C Wang; C D Robertson
Identification and isolation of three proteasome subunits and their encoding genes from Trypanosoma brucei.
Molecular and biochemical parasitology 1999;102(2):211-23.
1999: KR Clauser; P Baker; Al L Burlingame
Role of accurate mass measurement (+/- 10 ppm) in protein identification strategies employing MS or MS/MS and database searching.
Analytical chemistry 1999;71(14):2871-82.
1999: E Stimson; James Hope; A Chong; Al L Burlingame
Site-specific characterization of the N-linked glycans of murine prion protein by high-performance liquid chromatography/electrospray mass spectrometry and exoglycosidase digestions.
Biochemistry 1999;38(15):4885-95.
1999: J L Wolfender; F Chu; Haydn Ball; F Wolfender; Mike Fainzilber; Michael A Baldwin; Al L Burlingame
Identification of tyrosine sulfation in Conus pennaceus conotoxins alpha-PnIA and alpha-PnIB: further investigation of labile sulfo- and phosphopeptides by electrospray, matrix-assisted laser desorption/ionization (MALDI) and atmospheric pressure MALDI mass spectrometry.
Journal of mass spectrometry : JMS 1999;34(4):447-54.
1999: K D Swanson; L K Taylor; L Haung; Al L Burlingame; Gary Landreth
Transcription factor phosphorylation by pp90(rsk2). Identification of Fos kinase and NGFI-B kinase I as pp90(rsk2).
The Journal of biological chemistry 1999;274(6):3385-95.
1999: V L Talrose; M D Person; Randy M Whittal; F C Walls; Al L Burlingame; Michael A Baldwin
Insight into absorption of radiation/energy transfer in infrared matrix-assisted laser desorption/ionization: the roles of matrices, water and metal substrates.
Rapid communications in mass spectrometry : RCM 1999;13(21):2191-8.
1998: Rainer Cramer; W J Richter; E Stimson; Al L Burlingame
Analysis of phospho- and glycopolypeptides with infrared matrix-assisted laser desorption and ionization.
Analytical chemistry 1998;70(23):4939-44.
1998: Connie R Jiménez; Al L Burlingame
Ultramicroanalysis of peptide profiles in biological samples using MALDI mass spectrometry.
Experimental nephrology 1998;6(5):421-8.
1998: Al L Burlingame; R K Boyd; S J Gaskell
Mass spectrometry.
Analytical chemistry 1998;70(16):647R-716R.
1998: Y Qiu; L Z Benet; Al L Burlingame
Identification of the hepatic protein targets of reactive metabolites of acetaminophen in vivo in mice using two-dimensional gel electrophoresis and mass spectrometry.
The Journal of biological chemistry 1998;273(28):17940-53.
1998: Akraporn Prakobphol; Kristina A Thomsson; Gunnar Hansson; Steven D Rosen; Mark S Singer; Nancy J Phillips; Katalin F Medzihradszky; Al L Burlingame; Hakon Leffler; Susan J Fisher
Human low-molecular-weight salivary mucin expresses the sialyl lewisx determinant and has L-selectin ligand activity.
Biochemistry 1998;37(14):4916-27.
1998: Kathlynn Brown; Z Yu; Al L Burlingame; Charles S Craik
Determining protein-protein interactions by oxidative cross-linking of a glycine-glycine-histidine fusion protein.
Biochemistry 1998;37(13):4397-406.
1998: Y Qiu; Al L Burlingame; Leslie Z Benet
Mechanisms for covalent binding of benoxaprofen glucuronide to human serum albumin. Studies By tandem mass spectrometry.
Drug metabolism and disposition: the biological fate of chemicals 1998;26(3):246-56.
1998: Connie R Jiménez; Ka Wan Li; Klaus Dreisewerd; Sabine Spijker; R Kingston; R H Bateman; Al L Burlingame; August B Smit; Jan van Minnen; Wijnand P M Geraerts
Direct mass spectrometric peptide profiling and sequencing of single neurons reveals differential peptide patterns in a small neuronal network.
Biochemistry 1998;37(7):2070-6.
1998: M Fainzilber; T Nakamura; Johannes C Lodder; E Zlotkin; Karel S Kits; Al L Burlingame
gamma-Conotoxin-PnVIIA, a gamma-carboxyglutamate-containing peptide agonist of neuronal pacemaker cation currents.
Biochemistry 1998;37(6):1470-7.
1998: Katalin F Medzihradszky; MJ Besman; Al L Burlingame
Reverse-phase capillary high performance liquid chromatography/high performance electrospray ionization mass spectrometry: an essential tool for the characterization of complex glycoprotein digests.
Rapid communications in mass spectrometry : RCM 1998;12(8):472-8.
1997: Z Yu; G Friso; J J Miranda; MJ Patel; T Lo-Tseng; E G Moore; Al L Burlingame
Structural characterization of human hemoglobin crosslinked by bis(3,5-dibromosalicyl) fumarate using mass spectrometric techniques.
Protein science : a publication of the Protein Society 1997;6(12):2568-77.
1997: A Grogan; Emer P Reeves; Nicholas H Keep; Frans B Wientjes; Nick Totty; Al L Burlingame; J Justin Hsuan; Anthony W Segal
Cytosolic phox proteins interact with and regulate the assembly of coronin in neutrophils.
Journal of cell science 1997;110 ( Pt 24)():3071-81.
1997: LM Machesky; Emer P Reeves; Frans B Wientjes; F J Mattheyse; A Grogan; Nick Totty; Al L Burlingame; J Justin Hsuan; Anthony W Segal
Mammalian actin-related protein 2/3 complex localizes to regions of lamellipodial protrusion and is composed of evolutionarily conserved proteins.
The Biochemical journal 1997;328 ( Pt 1)():105-12.
1997: P S Caldera; Z Yu; RM Knegtel; F McPhee; Al L Burlingame; Charles S Craik; Irwin D Kuntz; Paul R. Ortiz de Montellano
Alkylation of a catalytic aspartate group of the SIV protease by an epoxide inhibitor.
Bioorganic & medicinal chemistry 1997;5(11):2019-27.
1997: Katalin F Medzihradszky; MJ Besman; Al L Burlingame
Structural characterization of site-specific N-glycosylation of recombinant human factor VIII by reversed-phase high-performance liquid chromatography-electrospray ionization mass spectrometry.
Analytical chemistry 1997;69(19):3986-94.
1997: N Talwar; Renate B Pilz; Z Yu; Al L Burlingame; Gerry R Boss
A low molecular weight substance purified from human placenta inhibits cAMP-dependent protein kinase and activates protein kinase C.
Molecular and cellular biochemistry 1997;170(1-2):75-83.
1997: C M Sullivan; D M Smith; N M Matsui; L E Andrews; KR Clauser; A Chapeaurouge; Al L Burlingame; LB Epstein
Identification of constitutive and gamma-interferon- and interleukin 4-regulated proteins in the human renal carcinoma cell line ACHN.
Cancer research 1997;57(6):1137-43.
1997: N M Matsui; D M Smith; KR Clauser; J Fichmann; L E Andrews; C M Sullivan; Al L Burlingame; LB Epstein
Immobilized pH gradient two-dimensional gel electrophoresis and mass spectrometric identification of cytokine-regulated proteins in ME-180 cervical carcinoma cells.
Electrophoresis 1997;18(3-4):409-17.
1996: LB Epstein; D M Smith; N M Matsui; H M Tran; C Sullivan; I Raineri; Al L Burlingame; K R Clauser; S C Hall; L E Andrews
Identification of cytokine-regulated proteins in normal and malignant cells by the combination of two-dimensional polyacrylamide gel electrophoresis, mass spectrometry, Edman degradation and immunoblotting and approaches to the analysis of their functional roles.
Electrophoresis 1996;17(11):1655-70.
1996: S X Wang; Minae Mure; K F Medzihradszky; Al L Burlingame; D E Brown; David M Dooley; A J Smith; Herbert M Kagan; Judith P Klinman
A crosslinked cofactor in lysyl oxidase: redox function for amino acid side chains.
Science (New York, N.Y.) 1996;273(5278):1078-84.
1996: Mike Fainzilber; Johannes C Lodder; Roel C Van Der Schors; Ka Wan Li; Z Yu; Al L Burlingame; Wijnand P M Geraerts; Karel S Kits
A novel hydrophobic omega-conotoxin blocks molluscan dihydropyridine-sensitive calcium channels.
Biochemistry 1996;35(26):8748-52.
1996: Al L Burlingame; R K Boyd; S J Gaskell
Mass spectrometry.
Analytical chemistry 1996;68(12):599R-651R.
1996: T Nakamura; Z Yu; M Fainzilber; Al L Burlingame
Mass spectrometric-based revision of the structure of a cysteine-rich peptide toxin with gamma-carboxyglutamic acid, TxVIIA, from the sea snail, Conus textile.
Protein science : a publication of the Protein Society 1996;5(3):524-30.
1996: Al L Burlingame
Characterization of protein glycosylation by mass spectrometry.
Current opinion in biotechnology 1996;7(1):4-10.
1996: C A Settineri; Al L Burlingame
Structural characterization of protein glycosylation using HPLC/electrospray ionization mass spectrometry and glycosidase digestion.
Methods in molecular biology (Clifton, N.J.) 1996;61():255-78.
1995: Susan Tsutakawa; K F Medzihradszky; A J Flint; Al L Burlingame; D E Koshland
Determination of in vivo phosphorylation sites in protein kinase C.
The Journal of biological chemistry 1995;270(45):26807-12.
1995: Shin-ichiro Iwahara; H Satoh; D X Song; J Webb; Al L Burlingame; Y Nagae; U Muller-Eberhard
Purification, characterization, and cloning of a heme-binding protein (23 kDa) in rat liver cytosol.
Biochemistry 1995;34(41):13398-406.
1995: P Zia-Amirhosseini; A Ding; Al L Burlingame; A F McDonagh; Leslie Z Benet
Synthesis and mass-spectrometric characterization of human serum albumins modified by covalent binding of two non-steroidal anti-inflammatory drugs: tolmetin and zomepirac.
The Biochemical journal 1995;311 ( Pt 2)():431-5.
1995: Krisztina Pongracz; D N Pathak; T Nakamura; Al L Burlingame; William J Bodell
Activation of the tamoxifen derivative metabolite E to form DNA adducts: comparison with the adducts formed by microsomal activation of tamoxifen.
Cancer research 1995;55(14):3012-5.
1995: Mike Fainzilber; T Nakamura; A Gaathon; Johannes C Lodder; Karel S Kits; Al L Burlingame; E Zlotkin
A new cysteine framework in sodium channel blocking conotoxins.
Biochemistry 1995;34(27):8649-56.
1995: K R Clauser; S C Hall; D M Smith; J W Webb; L E Andrews; H M Tran; LB Epstein; Al L Burlingame
Rapid mass spectrometric peptide sequencing and mass matching for characterization of human melanoma proteins isolated by two-dimensional PAGE.
Proceedings of the National Academy of Sciences of the United States of America 1995;92(11):5072-6.
1995: P A Schindler; C A Settineri; X Collet; Christopher J Fielding; Al L Burlingame
Site-specific detection and structural characterization of the glycosylation of human plasma proteins lecithin:cholesterol acyltransferase and apolipoprotein D using HPLC/electrospray mass spectrometry and sequential glycosidase digestion.
Protein science : a publication of the Protein Society 1995;4(4):791-803.
1995: A Ding; P Zia-Amirhosseini; A F McDonagh; Al L Burlingame; Leslie Z Benet
Reactivity of tolmetin glucuronide with human serum albumin. Identification of binding sites and mechanisms of reaction by tandem mass spectrometry.
Drug metabolism and disposition: the biological fate of chemicals 1995;23(3):369-76.
1995: G W Adams; P Mayer; Katalin F Medzihradszky; Al L Burlingame
Mass spectrometric studies of the primary sequence and structure of bovine liver and serum amine oxidase.
Methods in enzymology 1995;258():90-114.
1994: J G Robertson; G W Adams; Katalin F Medzihradszky; Al L Burlingame; J J Villafranca
Complete assignment of disulfide bonds in bovine dopamine beta-hydroxylase.
Biochemistry 1994;33(38):11563-75.
1994: J D Brown; B C Hann; K F Medzihradszky; Maho Niwa; Al L Burlingame; Peter Walter
Subunits of the Saccharomyces cerevisiae signal recognition particle required for its functional expression.
The EMBO journal 1994;13(18):4390-400.
1994: Mike Fainzilber; A Hasson; R Oren; Al L Burlingame; D Gordon; Micha E Spira; E Zlotkin
New mollusc-specific alpha-conotoxins block Aplysia neuronal acetylcholine receptors.
Biochemistry 1994;33(32):9523-9.
1994: Al L Burlingame; R K Boyd; S J Gaskell
Mass spectrometry.
Analytical chemistry 1994;66(12):634R-683R.
1994: R Salto; L M Babé; J Li; J R Rosé; Z Yu; Al L Burlingame; J J De Voss; Z Sui; Paul R. Ortiz de Montellano; Charles S Craik
In vitro characterization of nonpeptide irreversible inhibitors of HIV proteases.
The Journal of biological chemistry 1994;269(14):10691-8.
1994: D Mu; Katalin F Medzihradszky; G W Adams; P Mayer; W M Hines; Al L Burlingame; A J Smith; D Cai; Judith P Klinman
Primary structures for a mammalian cellular and serum copper amine oxidase.
The Journal of biological chemistry 1994;269(13):9926-32.
1993: J Herrmann; Christoph W Turck; RE Atchison; M E Huflejt; L Poulter; M A Gitt; Al L Burlingame; SH Barondes; Hakon Leffler
Primary structure of the soluble lactose binding lectin L-29 from rat and dog and interaction of its non-collagenous proline-, glycine-, tyrosine-rich sequence with bacterial and tissue collagenase.
The Journal of biological chemistry 1993;268(35):26704-11.
1993: S F Mel; Arnold M Falick; Al L Burlingame; Robert M Stroud
Mapping a membrane-associated conformation of colicin Ia.
Biochemistry 1993;32(36):9473-9.
1993: A Ding; J C Ojingwa; A F McDonagh; Al L Burlingame; Leslie Z Benet
Evidence for covalent binding of acyl glucuronides to serum albumin via an imine mechanism as revealed by tandem mass spectrometry.
Proceedings of the National Academy of Sciences of the United States of America 1993;90(9):3797-801.
1993: Y Oda; J Herrmann; M A Gitt; Christoph W Turck; Al L Burlingame; SH Barondes; Hakon Leffler
Soluble lactose-binding lectin from rat intestine with two different carbohydrate-binding domains in the same peptide chain.
The Journal of biological chemistry 1993;268(8):5929-39.
1993: Neil stahl; Michael A Baldwin; David B Teplow; L Hood; Bradford W Gibson; Al L Burlingame; Stanley B Prusiner
Structural studies of the scrapie prion protein using mass spectrometry and amino acid sequencing.
Biochemistry 1993;32(8):1991-2002.
1993: S C Hall; D M Smith; F R Masiarz; V W Soo; H M Tran; LB Epstein; Al L Burlingame
Mass spectrometric and Edman sequencing of lipocortin I isolated by two-dimensional SDS/PAGE of human melanoma lysates.
Proceedings of the National Academy of Sciences of the United States of America 1993;90(5):1927-31.
1993: S Kaur; Krisztina Pongracz; William J Bodell; Al L Burlingame
Bis(hydroxyphenylethyl)deoxyguanosine adducts identified by [32P]-postlabeling and four-sector tandem mass spectrometry: unanticipated adducts formed upon treatment of DNA with styrene 7,8-oxide.
Chemical research in toxicology 1993;6(1):125-32.
1992: D X Wen; B D Livingston; K F Medzihradszky; S Kelm; Al L Burlingame; J C Paulson
Primary structure of Gal beta 1,3(4)GlcNAc alpha 2,3-sialyltransferase determined by mass spectrometry sequence analysis and molecular cloning. Evidence for a protein motif in the sialyltransferase gene family.
The Journal of biological chemistry 1992;267(29):21011-9.
1992: David Avram Sanders; B L Gillece-Castro; Al L Burlingame; Daniel E Koshland
Phosphorylation site of NtrC, a protein phosphatase whose covalent intermediate activates transcription.
Journal of bacteriology 1992;174(15):5117-22.
1992: Al L Burlingame; T A Baillie; D H Russell
Mass spectrometry.
Analytical chemistry 1992;64(12):467R-502R.
1992: Neil stahl; Michael A Baldwin; R Hecker; K M Pan; Al L Burlingame; Stanley B Prusiner
Glycosylinositol phospholipid anchors of the scrapie and cellular prion proteins contain sialic acid.
Biochemistry 1992;31(21):5043-53.
1992: Krisztina Pongracz; S Kaur; Al L Burlingame; William J Bodell
Identification of N2-substituted 2'-deoxyguanosine-3'-phosphate adducts detected by 32P-postlabeling of styrene-oxide-treated DNA.
Carcinogenesis 1992;13(3):315-9.
1992: D D Buechter; Katalin F Medzihradszky; Al L Burlingame; G L Kenyon
The active site of creatine kinase. Affinity labeling of cysteine 282 with N-(2,3-epoxypropyl)-N-amidinoglycine.
The Journal of biological chemistry 1992;267(4):2173-8.
1992: K F Medzihradszky; Bradford W Gibson; S Kaur; Z H Yu; D Medzihradszky; Al L Burlingame; Nathan M Bass
The primary structure of fatty-acid-binding protein from nurse shark liver. Structural and evolutionary relationship to the mammalian fatty-acid-binding protein family.
European journal of biochemistry / FEBS 1992;203(3):327-39.
1991: B L Gillece-Castro; Akraporn Prakobphol; Al L Burlingame; Hakon Leffler; Susan J Fisher
Structure and bacterial receptor activity of a human salivary proline-rich glycoprotein.
The Journal of biological chemistry 1991;266(26):17358-68.
1991: L Poulter; R Karrer; Al L Burlingame
n-Alkyl p-aminobenzoates as derivatizing agents in the isolation, separation, and characterization of submicrogram quantities of oligosaccharides by liquid secondary ion mass spectrometry.
Analytical biochemistry 1991;195(1):1-13.
1991: S Kaur; S C Hall; Al L Burlingame
Strategies for identification of covalent xenobiotic modifications in proteins by mass spectrometry.
Progress in clinical and biological research 1991;372():107-17.
1990: K F Medzihradszky; B L Gillece-Castro; C A Settineri; R R Townsend; F R Masiarz; Al L Burlingame
Structure determination of O-linked glycopeptides by tandem mass spectrometry.
Biomedical & environmental mass spectrometry 1990;19(12):777-81.
1990: Michael A Baldwin; Neil stahl; L G Reinders; Bradford W Gibson; Stanley B Prusiner; Al L Burlingame
Permethylation and tandem mass spectrometry of oligosaccharides having free hexosamine: analysis of the glycoinositol phospholipid anchor glycan from the scrapie prion protein.
Analytical biochemistry 1990;191(1):174-82.
1990: C A Settineri; K F Medzihradszky; F R Masiarz; Al L Burlingame; C Chu; C George-Nascimento
Characterization of O-glycosylation sites in recombinant B-chain of platelet-derived growth factor expressed in yeast using liquid secondary ion mass spectrometry, tandem mass spectrometry and Edman sequence analysis.
Biomedical & environmental mass spectrometry 1990;19(11):665-76.
1990: Neil stahl; Michael A Baldwin; Al L Burlingame; Stanley B Prusiner
Identification of glycoinositol phospholipid linked and truncated forms of the scrapie prion protein.
Biochemistry 1990;29(38):8879-84.
1990: Krisztina Pongracz; S Kaur; Al L Burlingame; William J Bodell
Detection of (3'-hydroxy)-3,N4-benzetheno-2'-deoxycytidine-3'-phosphate by 32P-postlabeling of DNA reacted with p-benzoquinone.
Carcinogenesis 1990;11(9):1469-72.
1990: Al L Burlingame; David S Millington; D L Norwood; D H Russell
Mass spectrometry.
Analytical chemistry 1990;62(12):268R-303R.
1990: S M Janes; D Mu; David E Wemmer; A J Smith; S Kaur; D Maltby; Al L Burlingame; Judith P Klinman
A new redox cofactor in eukaryotic enzymes: 6-hydroxydopa at the active site of bovine serum amine oxidase.
Science (New York, N.Y.) 1990;248(4958):981-7.
1990: William J Bodell; Krisztina Pongracz; S Kaur; Al L Burlingame; S F Liu; Stephen M Rappaport
Investigation of styrene oxide-DNA adducts and their detection in workers exposed to styrene.
Progress in clinical and biological research 1990;340C():271-82.
1990: B L Gillece-Castro; Al L Burlingame
Oligosaccharide characterization with high-energy collision-induced dissociation mass spectrometry.
Methods in enzymology 1990;193():689-712.
1990: L Poulter; Al L Burlingame
Desorption mass spectrometry of oligosaccharides coupled with hydrophobic chromophores.
Methods in enzymology 1990;193():661-89.
1989: David Avram Sanders; B L Gillece-Castro; A M Stock; Al L Burlingame; Daniel E Koshland
Identification of the site of phosphorylation of the chemotaxis response regulator protein, CheY.
The Journal of biological chemistry 1989;264(36):21770-8.
1989: S Kaur; D Hollander; R Haas; Al L Burlingame
Characterization of structural xenobiotic modifications in proteins by high sensitivity tandem mass spectrometry. Human hemoglobin treated in vitro with styrene 7,8-oxide.
The Journal of biological chemistry 1989;264(29):16981-4.
1989: T Haraguchi; S Fisher; S Olofsson; T Endo; Darlene Groth; AL Tarentino; David R Borchelt; David B Teplow; L Hood; Al L Burlingame
Asparagine-linked glycosylation of the scrapie and cellular prion proteins.
Archives of biochemistry and biophysics 1989;274(1):1-13.
1989: L Poulter; J P Earnest; Robert M Stroud; Al L Burlingame
Structure, oligosaccharide structures, and posttranslationally modified sites of the nicotinic acetylcholine receptor.
Proceedings of the National Academy of Sciences of the United States of America 1989;86(17):6645-9.
1989: Luis M Hernández; L Ballou; E Alvarado; B L Gillece-Castro; Al L Burlingame; C E Ballou
A new Saccharomyces cerevisiae mnn mutant N-linked oligosaccharide structure.
The Journal of biological chemistry 1989;264(20):11849-56.
1989: Krisztina Pongracz; S Kaur; Al L Burlingame; William J Bodell
O6-substituted-2'-deoxyguanosine-3'-phosphate adducts detected by 32P post-labeling of styrene oxide treated DNA.
Carcinogenesis 1989;10(6):1009-13.
1989: Bradford W Gibson; J W Webb; R Yamasaki; Susan J Fisher; Al L Burlingame; Robert Mandrell; H Schneider; J McLeod Griffiss
Structure and heterogeneity of the oligosaccharides from the lipopolysaccharides of a pyocin-resistant Neisseria gonorrhoeae.
Proceedings of the National Academy of Sciences of the United States of America 1989;86(1):17-21.
1988: L Poulter; J P Earnest; Robert M Stroud; Al L Burlingame
Cesium ion liquid secondary ion mass spectrometry of membrane-bound glycoproteins: structural and topological considerations of acetylcholine receptor from Torpedo californica.
Biomedical & environmental mass spectrometry 1988;16(1-12):25-30.
1988: X B Xu; Al L Burlingame
Environmental applications of organic mass spectrometry in China.
Biomedical and environmental sciences : BES 1988;1(3):253-69.
1988: W H Aberth; Al L Burlingame
Effect of primary beam energy on the secondary ion sputtering efficiency of liquid secondary ionization mass spectrometry in the 5-30-keV range.
Analytical chemistry 1988;60(14):1426-8.
1988: Al L Burlingame; D Maltby; D H Russell; P T Holland
Mass spectrometry.
Analytical chemistry 1988;60(12):294R-342R.
1988: Bradford W Gibson; Z G Yu; W Aberth; Al L Burlingame; Nathan M Bass
Revision of the blocked N terminus of rat heart fatty acid-binding protein by liquid secondary ion mass spectrometry.
The Journal of biological chemistry 1988;263(9):4182-5.
1988: J W Webb; K Jiang; B L Gillece-Castro; AL Tarentino; TH Plummer; J C Byrd; Susan J Fisher; Al L Burlingame
Structural characterization of intact, branched oligosaccharides by high performance liquid chromatography and liquid secondary ion mass spectrometry.
Analytical biochemistry 1988;169(2):337-49.
1987: B L Gillece-Castro; S J Fisher; AL Tarentino; D L Peterson; Al L Burlingame
Structure of the oligosaccharide portion of human hepatitis B surface antigen.
Archives of biochemistry and biophysics 1987;256(1):194-201.
1986: Al L Burlingame; T A Baillie; P J Derrick
Mass spectrometry.
Analytical chemistry 1986;58(5):165R-211R.
1985: P P Wickramanayake; M L Deinzer; Al L Burlingame
Positive and negative liquid secondary ion mass spectrometry of chloro- and nitrophenylglucuronides.
Biomedical mass spectrometry 1985;12(3):127-33.
1984: W Aberth; Al L Burlingame
Comparison of three geometries for a cesium primary beam liquid secondary ion mass spectrometry source.
Analytical chemistry 1984;56(14):2915-8.
1984: R Latini; R Reginato; Al L Burlingame; R E Kates
High-performance liquid chromatographic isolation and fast atom bombardment mass spectrometric identification of Di-N-desethylamiodarone, a new metabolite of amiodarone in the dog.
Biomedical mass spectrometry 1984;11(9):466-71.
1983: M A Lampe; Al L Burlingame; J Whitney; M L Williams; B E Brown; E Roitman; P M Elias
Human stratum corneum lipids: characterization and regional variations.
Journal of lipid research 1983;24(2):120-30.
1981: K M Straub; Al L Burlingame
Carcinogen binding to DNA.
Biomedical mass spectrometry 1981;8(9):431-5.
1981: X B Xu; J P Nachtman; S M Rappaport; E T Wei; S Lewis; Al L Burlingame
Identification of 2-nitrofluorene in diesel exhaust particulates.
Journal of applied toxicology : JAT 1981;1(3):196-8.
1981: A Eberhard; Al L Burlingame; C Eberhard; G L Kenyon; K H Nealson; N J Oppenheimer
Structural identification of autoinducer of Photobacterium fischeri luciferase.
Biochemistry 1981;20(9):2444-9.
1981: M Linscheid; J D'Angona; Al L Burlingame; A Dell; C E Ballou
Field desorption mass spectrometry of oligosaccharides.
Proceedings of the National Academy of Sciences of the United States of America 1981;78(3):1471-5.
1979: S Lewis; C N Kenyon; J Meili; Al L Burlingame
High resolution gas chromatographic/real-time high resolution mass spectrometric identification of organic acids in human urine.
Analytical chemistry 1979;51(8):1275-85.
1977: K M Straub; T Meehan; Al L Burlingame; Melvin Calvin
Identification of the major adducts formed by reaction of benzo(a)pyrene diol epoxide with DNA in vitro.
Proceedings of the National Academy of Sciences of the United States of America 1977;74(12):5285-9.
1977: Al L Burlingame
Assessment of the trace organic molecular composition of industrial and municipal wastewater effluents by capillary gas chromatography/real-time high-resolution mass spectrometry: a preliminary report.
Ecotoxicology and environmental safety 1977;1(1):111-50.
1971: B Balogh; D M Wilson; Al L Burlingame
Carbon-13 NMR study of the stereochemistry of steranes from oil shale of the Green River formation (Eocene).
Nature 1971;233(5317):261-3.
1970: B R Simoneit; H K Schnoes; P Haug; Al L Burlingame
Nitrogenous compounds of the Colorado Green River Formation oil shale: a preliminary analysis by mass spectrometry.
Nature 1970;226(5240):75-6.