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Peter Stockley

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

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Living Beings

Anatomy

Capsid

Chemicals & Drugs

Concepts & Ideas

Phenomena

Procedures

X-Ray Crystallography

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Co-Publications
Name
24
Stonehouse, Nicola
12
Phillips, Simon
12
Adams, Chris
12
Liljas, Lars
10
Baumberg, Simon
8
Murray, James
6
Valegård, Karin
6
Lago, Hugo
5
Ashcroft, Alison
5
Grahn, Elin
5
van den Worm, Sjoerd
5
Manfield, Iain
4
Nelson, Adam
4
Fridborg, Kerstin
3
Garnett, James

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Publications

TOP 3
Barton Jenny L; Bunka David H J; Knowling Stuart E; Lefevre Pascal; Warren Alan J; Bonifer Constanze; Stockley Peter G
Characterization of RNA aptamers that disrupt the RUNX1-CBFbeta/DNA complex.
Joce Catherine; Caryl Jamie; Stockley Peter G; Warriner Stuart; Nelson Adam
Identification of stable S-adenosylmethionine (SAM) analogues derivatised with bioorthogonal tags: effect of ligands on the affinity of the E. coli methionine repressor, MetJ, for its operator DNA.
Stockley Peter G; Persson Björn
Surface plasmon resonance assays of DNA-protein interactions.

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All Publications

2009: Barton Jenny L; Bunka David H J; Knowling Stuart E; Lefevre Pascal; Warren Alan J; Bonifer Constanze; Stockley Peter G
Characterization of RNA aptamers that disrupt the RUNX1-CBFbeta/DNA complex.
Nucleic acids research 2009;37(20):6818-30.
2009: Joce Catherine; Caryl Jamie; Stockley Peter G; Warriner Stuart; Nelson Adam
Identification of stable S-adenosylmethionine (SAM) analogues derivatised with bioorthogonal tags: effect of ligands on the affinity of the E. coli methionine repressor, MetJ, for its operator DNA.
Organic & biomolecular chemistry 2009;7(4):635-8.
2009: Stockley Peter G; Persson Björn
Surface plasmon resonance assays of DNA-protein interactions.
Methods in molecular biology (Clifton, N.J.) 2009;543():653-69.
2009: Manfield Iain W; Stockley Peter G
Ethylation interference footprinting of DNA-protein complexes.
Methods in molecular biology (Clifton, N.J.) 2009;543():105-20.
2009: Stockley Peter G
Filter-binding assays.
Methods in molecular biology (Clifton, N.J.) 2009;543():1-14.
2008: Gell Christopher; Sabir Tara; Westwood Jonathan; Rashid Abdul; Smith D Alastair M; Harris Sarah-Anne; Stockley Peter G
Single-molecule fluorescence resonance energy transfer assays reveal heterogeneous folding ensembles in a simple RNA stem-loop.
Journal of molecular biology 2008;384(1):264-78.
2008: Morton Victoria L; Stockley Peter G; Stonehouse Nicola J; Ashcroft Alison E
Insights into virus capsid assembly from non-covalent mass spectrometry.
Mass spectrometry reviews 2008;27(6):575-95.
2008: Garnett James A; Marincs Ferenc; Baumberg Simon; Stockley Peter G; Phillips Simon E V
Structure and function of the arginine repressor-operator complex from Bacillus subtilis.
Journal of molecular biology 2008;379(2):284-98.
2008: Toropova Katerina; Basnak Gabriella; Twarock Reidun; Stockley Peter G; Ranson Neil A
The three-dimensional structure of genomic RNA in bacteriophage MS2: implications for assembly.
Journal of molecular biology 2008;375(3):824-36.
2007: Garnett James A; Baumberg Simon; Stockley Peter G; Phillips Simon E V
Structure of the C-terminal effector-binding domain of AhrC bound to its corepressor L-arginine.
Acta crystallographica. Section F, Structural biology and crystallization communications 2007;63(Pt 11):918-21.
2007: Garnett James A; Baumberg Simon; Stockley Peter G; Phillips Simon E V
A high-resolution structure of the DNA-binding domain of AhrC, the arginine repressor/activator protein from Bacillus subtilis.
Acta crystallographica. Section F, Structural biology and crystallization communications 2007;63(Pt 11):914-7.
2007: Bunka David H J; Mantle Benjamin J; Morten Isobel J; Tennent Glenys A; Radford Sheena E; Stockley Peter G
Production and characterization of RNA aptamers specific for amyloid fibril epitopes.
The Journal of biological chemistry 2007;282(47):34500-9.
2007: Stockley Peter G; Rolfsson Ottar; Thompson Gary S; Basnak Gabriella; Francese Simona; Stonehouse Nicola J; Homans Steven W; Ashcroft Alison E
A simple, RNA-mediated allosteric switch controls the pathway to formation of a T=3 viral capsid.
Journal of molecular biology 2007;369(2):541-52.
2007: Ironmonger Alan; Whittaker Benjamin; Baron Andrew J; Clique Blandine; Adams Chris J; Ashcroft Alison E; Stockley Peter G; Nelson Adam
Scanning conformational space with a library of stereo- and regiochemically diverse aminoglycoside derivatives: the discovery of new ligands for RNA hairpin sequences.
Organic & biomolecular chemistry 2007;5(7):1081-6.
2006: Leach Robert N; Gell Christopher; Wigneshweraraj Sivaramesh; Buck Martin; Smith Alastair; Stockley Peter George
Mapping ATP-dependent activation at a sigma54 promoter.
The Journal of biological chemistry 2006;281(44):33717-26.
2006: Bunka David H J; Stockley Peter G
Aptamers come of age - at last.
Nature reviews. Microbiology 2006;4(8):588-96.
2006: Marincs Ferenc; Manfield Iain W; Stead Jonathan A; McDowall Kenneth J; Stockley Peter G
Transcript analysis reveals an extended regulon and the importance of protein-protein co-operativity for the Escherichia coli methionine repressor.
The Biochemical journal 2006;396(2):227-34.
2006: Horn Wilf T; Tars Kaspars; Grahn Elin; Helgstrand Charlotte; Baron Andrew J; Lago Hugo; Adams Chris J; Peabody David S; Phillips Simon E V; Stonehouse Nicola J; Liljas Lars; Stockley Peter G
Structural basis of RNA binding discrimination between bacteriophages Qbeta and MS2.
Structure (London, England : 1993) 2006;14(3):487-95.
2005: Ashcroft Alison E; Lago Hugo; Macedo Jacyara M B; Horn Wilf T; Stonehouse Nicola J; Stockley Peter G
Engineering thermal stability in RNA phage capsids via disulphide bonds.
Journal of nanoscience and nanotechnology 2005;5(12):2034-41.
2005: Clique Blandine; Ironmonger Alan; Whittaker Benjamin; Colley Jacqueline; Titchmarsh James; Stockley Peter; Nelson Adam
Synthesis of a library of stereo- and regiochemically diverse aminoglycoside derivatives.
Organic & biomolecular chemistry 2005;3(15):2776-85.
2005: Ironmonger Alan; Stockley Peter; Nelson Adam
Asymmetric double ring-opening of a C(2h)-symmetric bis-epoxide: improved enantiomeric excess of the product through enantioselective desymmetrisation and 'proof-reading' steps.
Organic & biomolecular chemistry 2005;3(12):2350-3.
2005: Wu Min; Sherwin Trevor; Brown William L; Stockley Peter G
Delivery of antisense oligonucleotides to leukemia cells by RNA bacteriophage capsids.
Nanomedicine : nanotechnology, biology, and medicine 2005;1(1):67-76.
2004: Horn Wilf T; Convery Máire A; Stonehouse Nicola J; Adams Chris J; Liljas Lars; Phillips Simon E V; Stockley Peter G
The crystal structure of a high affinity RNA stem-loop complexed with the bacteriophage MS2 capsid: further challenges in the modeling of ligand-RNA interactions.
RNA (New York, N.Y.) 2004;10(11):1776-82.
2004: Ryan Daniel E; Kim Chang Hee; Murray James B; Adams Chris J; Stockley Peter G; Abelson John
New tertiary constraints between the RNA components of active yeast spliceosomes: a photo-crosslinking study.
RNA (New York, N.Y.) 2004;10(8):1251-65.
2004: Lawrenson Isobel D; Stockley Peter G
Kinetic analysis of operator binding by the E. coli methionine repressor highlights the role(s) of electrostatic interactions.
FEBS letters 2004;564(1-2):136-42.
2003: Yoburn Joshua C; Deb Sipra; Manfield Iain W; Stockley Peter G; Van Vranken David L
A biaryl peptide crosslink in a MetJ peptide model confers cooperative, nonspecific binding to DNA that ablates both repressor binding and in vitro transcription.
Bioorganic & medicinal chemistry 2003;11(6):811-6.
2002: He Yi-Yuan; Garvie Colin W; Elworthy Stone; Manfield Iain W; McNally Teresa; Lawrenson Isobel D; Phillips Simon E V; Stockley Peter G
Structural and functional studies of an intermediate on the pathway to operator binding by Escherichia coli MetJ.
Journal of molecular biology 2002;320(1):39-53.
2002: Helgstrand Charlotte; Grahn Elin; Moss Timothy; Stonehouse Nicola J; Tars Kaspars; Stockley Peter G; Liljas Lars
Investigating the structural basis of purine specificity in the structures of MS2 coat protein RNA translational operator hairpins.
Nucleic acids research 2002;30(12):2678-85.
2002: Brown William L; Mastico Robert A; Wu Min; Heal Karen G; Adams Chris J; Murray James B; Simpson Jeremy C; Lord J Michael; Taylor-Robinson Andrew W; Stockley Peter G
RNA bacteriophage capsid-mediated drug delivery and epitope presentation.
Intervirology 2002;45(4-6):371-80.
2001: Grahn E; Moss T; Helgstrand C; Fridborg K; Sundaram M; Tars K; Lago H; Stonehouse N J; Davis D R; Stockley P G; Liljas L
Structural basis of pyrimidine specificity in the MS2 RNA hairpin-coat-protein complex.
RNA (New York, N.Y.) 2001;7(11):1616-27.
2001: Lago H; Parrott A M; Moss T; Stonehouse N J; Stockley P G
Probing the kinetics of formation of the bacteriophage MS2 translational operator complex: identification of a protein conformer unable to bind RNA.
Journal of molecular biology 2001;305(5):1131-44.
2001: Manfield I W; Stockley P G
Ethylation interference.
Methods in molecular biology (Clifton, N.J.) 2001;148():229-43.
2001: Stockley P G
Filter-binding assays.
Methods in molecular biology (Clifton, N.J.) 2001;148():1-11.
2000: Grahn E; Stonehouse N J; Adams C J; Fridborg K; Beigelman L; Matulic-Adamic J; Warriner S L; Stockley P G; Liljas L
Deletion of a single hydrogen bonding atom from the MS2 RNA operator leads to dramatic rearrangements at the RNA-coat protein interface.
Nucleic acids research 2000;28(23):4611-6.
2000: Argent R H; Parrott A M; Day P J; Roberts L M; Stockley P G; Lord J M; Radford S E
Ribosome-mediated folding of partially unfolded ricin A-chain.
The Journal of biological chemistry 2000;275(13):9263-9.
2000: Parrott A M; Lago H; Adams C J; Ashcroft A E; Stonehouse N J; Stockley P G
RNA aptamers for the MS2 bacteriophage coat protein and the wild-type RNA operator have similar solution behaviour.
Nucleic acids research 2000;28(2):489-97.
2000: Stockley P G; Mastico R A
Use of fusions to viral coat proteins as antigenic carriers for vaccine development.
Methods in enzymology 2000;326():551-69.
1999: Heal K G; Hill H R; Stockley P G; Hollingdale M R; Taylor-Robinson A W
Expression and immunogenicity of a liver stage malaria epitope presented as a foreign peptide on the surface of RNA-free MS2 bacteriophage capsids.
Vaccine 1999;18(3-4):251-8.
1999: Holtham C A; Jumel K; Miller C M; Harding S E; Baumberg S; Stockley P G
Probing activation of the prokaryotic arginine transcriptional regulator using chimeric proteins.
Journal of molecular biology 1999;289(4):707-27.
1999: Grahn E; Stonehouse N J; Murray J B; van den Worm S; Valegård K; Fridborg K; Stockley P G; Liljas L
Crystallographic studies of RNA hairpins in complexes with recombinant MS2 capsids: implications for binding requirements.
RNA (New York, N.Y.) 1999;5(1):131-8.
1999: McGregor A; Murray J B; Adams C J; Stockley P G; Connolly B A
Secondary structure mapping of an RNA ligand that has high affinity for the MetJ repressor protein and interference modification analysis of the protein-RNA complex.
The Journal of biological chemistry 1999;274(4):2255-62.
1998: Rowsell S; Stonehouse N J; Convery M A; Adams C J; Ellington A D; Hirao I; Peabody D S; Stockley P G; Phillips S E
Crystal structures of a series of RNA aptamers complexed to the same protein target.
Nature structural biology 1998;5(11):970-5.
1998: Stockley P G; Baron A J; Wild C M; Parsons I D; Miller C M; Holtham C A; Baumberg S
Dissecting the molecular details of prokaryotic transcriptional control by surface plasmon resonance: the methionine and arginine repressor proteins.
Biosensors & bioelectronics 1998;13(6):637-50.
1998: van den Worm S H; Stonehouse N J; Valegârd K; Murray J B; Walton C; Fridborg K; Stockley P G; Liljas L
Crystal structures of MS2 coat protein mutants in complex with wild-type RNA operator fragments.
Nucleic acids research 1998;26(5):1345-51.
1998: Lago H; Fonseca S A; Murray J B; Stonehouse N J; Stockley P G
Dissecting the key recognition features of the MS2 bacteriophage translational repression complex.
Nucleic acids research 1998;26(5):1337-44.
1998: Convery M A; Rowsell S; Stonehouse N J; Ellington A D; Hirao I; Murray J B; Peabody D S; Phillips S E; Stockley P G
Crystal structure of an RNA aptamer-protein complex at 2.8 A resolution.
Nature structural biology 1998;5(2):133-9.
1997: Parsons I D; Stockley P G
Quantitation of the Escherichia coli methionine repressor-operator interaction by surface plasmon resonance is not affected by the presence of a dextran matrix.
Analytical biochemistry 1997;254(1):82-7.
1997: Miller C M; Baumberg S; Stockley P G
Operator interactions by the Bacillus subtilis arginine repressor/activator, AhrC: novel positioning and DNA-mediated assembly of a transcriptional activator at catabolic sites.
Molecular microbiology 1997;26(1):37-48.
1997: Valegârd K; Murray J B; Stonehouse N J; van den Worm S; Stockley P G; Liljas L
The three-dimensional structures of two complexes between recombinant MS2 capsids and RNA operator fragments reveal sequence-specific protein-RNA interactions.
Journal of molecular biology 1997;270(5):724-38.
1997: Wu M; Brown W L; Hill H R; Stockley P G
Specific cytotoxicity against cells bearing HIV1 gp120 antigen by bacteriophage-encapsidated ricin A chain: implications for cell specific drug delivery.
Biochemical Society transactions 1997;25(2):158S.
1997: Hill H R; Stonehouse N J; Fonseca S A; Stockley P G
Analysis of phage MS2 coat protein mutants expressed from a reconstituted phagemid reveals that proline 78 is essential for viral infectivity.
Journal of molecular biology 1997;266(1):1-7.
1996: Wild C M; McNally T; Phillips S E; Stockley P G
Effects of systematic variation of the minimal Escherichia coli met consensus operator site: in vivo and in vitro met repressor binding.
Molecular microbiology 1996;21(6):1125-35.
1996: Wu M; Brown W L; Hill H R; Stockley P G
Development of a novel drug-delivery system using bacteriophage MS2 capsids.
Biochemical Society transactions 1996;24(3):413S.
1996: Stonehouse N J; Scott D J; Fonseca S; Murray J; Adams C; Clarke A R; Valegård K; Golmohammadi R; van den Worm S; Liljas L; Stockley P G
Molecular interactions in the RNA bacteriophage MS2.
Biochemical Society transactions 1996;24(3):412S.
1996: McGregor A; Rao M V; Duckworth G; Stockley P G; Connolly B A
Preparation of oligoribonucleotides containing 4-thiouridine using Fpmp chemistry. Photo-crosslinking to RNA binding proteins using 350 nm irradiation.
Nucleic acids research 1996;24(16):3173-80.
1996: Hill H R; Stockley P G
Phage presentation.
Molecular microbiology 1996;20(4):685-92.
1996: Stonehouse N J; Valegård K; Golmohammadi R; van den Worm S; Walton C; Stockley P G; Liljas L
Crystal structures of MS2 capsids with mutations in the subunit FG loop.
Journal of molecular biology 1996;256(2):330-9.
1996: He Y Y; Stockley P G; Gold L
In vitro evolution of the DNA binding sites of Escherichia coli methionine repressor, MetJ.
Journal of molecular biology 1996;255(1):55-66.
1995: Murray J B; Adams C J; Arnold J R; Stockley P G
The roles of the conserved pyrimidine bases in hammerhead ribozyme catalysis: evidence for a magnesium ion-binding site.
The Biochemical journal 1995;311 ( Pt 2)():487-94.
1995: Wu M; Brown W L; Stockley P G
Cell-specific delivery of bacteriophage-encapsidated ricin A chain.
Bioconjugate chemistry 1995;6(5):587-95.
1995: Klingel U; Miller C M; North A K; Stockley P G; Baumberg S
A binding site for activation by the Bacillus subtilis AhrC protein, a repressor/activator of arginine metabolism.
Molecular & general genetics : MGG 1995;248(3):329-40.
1995: Stockley P G; Stonehouse N J; Murray J B; Goodman S T; Talbot S J; Adams C J; Liljas L; Valegård K
Probing sequence-specific RNA recognition by the bacteriophage MS2 coat protein.
Nucleic acids research 1995;23(13):2512-8.
1995: Renwick S B; Critchley A D; Adams C J; Kelly S M; Price N C; Stockley P G
Probing the details of the HIV-1 Rev-Rev-responsive element interaction: effects of modified nucleotides on protein affinity and conformational changes during complex formation.
The Biochemical journal 1995;308 ( Pt 2)():447-53.
1995: Parsons I D; Persson B; Mekhalfia A; Blackburn G M; Stockley P G
Probing the molecular mechanism of action of co-repressor in the E. coli methionine repressor-operator complex using surface plasmon resonance (SPR).
Nucleic acids research 1995;23(2):211-6.
1994: Stockley P G; Stonehouse N J; Valegård K
Molecular mechanism of RNA phage morphogenesis.
The International journal of biochemistry 1994;26(10-11):1249-60.
1994: Valegård K; Murray J B; Stockley P G; Stonehouse N J; Liljas L
Crystal structure of an RNA bacteriophage coat protein-operator complex.
Nature 1994;371(6498):623-6.
1994: Stockley P G
Filter-binding assays.
Methods in molecular biology (Clifton, N.J.) 1994;30():251-62.
1994: Manfield I; Stockley P G
Ethylation interference.
Methods in molecular biology (Clifton, N.J.) 1994;30():125-39.
1993: Stonehouse N J; Stockley P G
Effects of amino acid substitution on the thermal stability of MS2 capsids lacking genomic RNA.
FEBS letters 1993;334(3):355-9.
1993: Stockley P G; Stonehouse N J; Walton C; Walters D A; Medina G; Macedo J M; Hill H R; Goodman S T; Talbot S J; Tewary H K
Molecular mechanism of RNA-phage morphogenesis.
Biochemical Society transactions 1993;21 ( Pt 3)(3):627-33.
1993: Critchley A D; Haneef I; Cousens D J; Stockley P G
Modeling and solution structure probing of the HIV-1 TAR stem-loop.
Journal of molecular graphics 1993;11(2):92-7, 124.
1993: Mastico R A; Talbot S J; Stockley P G
Multiple presentation of foreign peptides on the surface of an RNA-free spherical bacteriophage capsid.
The Journal of general virology 1993;74 ( Pt 4)():541-8.
1992: He Y Y; McNally T; Manfield I; Navratil O; Old I G; Phillips S E; Saint-Girons I; Stockley P G
Probing met repressor-operator recognition in solution.
Nature 1992;359(6394):431-3.
1992: Tiley L S; Malim M H; Tewary H K; Stockley P G; Cullen B R
Identification of a high-affinity RNA-binding site for the human immunodeficiency virus type 1 Rev protein.
Proceedings of the National Academy of Sciences of the United States of America 1992;89(2):758-62.
1992: Czaplewski L G; North A K; Smith M C; Baumberg S; Stockley P G
Purification and initial characterization of AhrC: the regulator of arginine metabolism genes in Bacillus subtilis.
Molecular microbiology 1992;6(2):267-75.
1991: Talbot S J; Medina G; Fishwick C W; Haneef I; Stockley P G
Hyperreactivity of adenines and conformational flexibility of a translational repression site.
FEBS letters 1991;283(1):159-64.
1991: Goodman S T; Talbot S J; Haneef I; Tewary H K; Fishwick C W; Stockley P G
Synthetic RNA in the study of RNA-protein interactions of MS2 bacteriophage.
Nucleic acids symposium series 1991;(24):293.
1990: Talbot S J; Goodman S; Bates S R; Fishwick C W; Stockley P G
Use of synthetic oligoribonucleotides to probe RNA-protein interactions in the MS2 translational operator complex.
Nucleic acids research 1990;18(12):3521-8.
1990: Boys C W; Czaplewski L G; Phillips S E; Baumberg S; Stockley P G
Crystallization of the arginine-dependent repressor/activator AhrC from Bacillus subtilis.
Journal of molecular biology 1990;213(2):227-8.
1989: Haneef I; Talbot S J; Stockley P G
Modeling loop structures in proteins and nucleic acids: an RNA stem-loop.
Journal of molecular graphics 1989;7(4):186-95.
1989: Phillips S E; Manfield I; Parsons I; Davidson B E; Rafferty J B; Somers W S; Margarita D; Cohen G N; Saint-Girons I; Stockley P G
Cooperative tandem binding of met repressor of Escherichia coli.
Nature 1989;341(6244):711-5.
1989: Boys C W; Hill D J; Stockley P G; Woodward J R
Crystallization of alcohol oxidase from Pichia pastoris.
Journal of molecular biology 1989;208(1):211-2.
1989: Smith M C; Czaplewski L; North A K; Baumberg S; Stockley P G
Sequences required for regulation of arginine biosynthesis promoters are conserved between Bacillus subtilis and Escherichia coli.
Molecular microbiology 1989;3(1):23-8.

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