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Joe DeRisi

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Oligonucleotide Array Sequence Analysis

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Chemicals & Drugs

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Nucleic Acid Hybridization

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Mononegavirales Infections

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Polly M Fordyce; Philipp Kimmig; Christopher S Nelson; David Pincus; Peter Walter; Hana El-Samad; Joe L DeRisi
Basic leucine zipper transcription factor Hac1 binds DNA in two distinct modes as revealed by microfluidic analyses.
Anthony O'Donoghue; Gang Qu; Jacob B Statnekov; Min Zhou; Marc O Anderson; Alma L Burlingame; Joe L DeRisi; A Alegra Eroy-Reveles; Alexander L Greninger; Daniel R Hostetter; Jessica Ingram; Giselle M Knudsen; David A Maltby; James H McKerrow; Charles S Craik
Global identification of peptidase specificity by multiplex substrate profiling.
David Lowes; Jon Mirsalis; Toufan Parman; Anupam Pradhan; Martina Sigal; Liang Tang; Emily Wilson; Fangyi Zhu; Julie A Clark; MC Connelly; Joe L DeRisi; Anna Furimsky; Jason Gow; W Armand Guiguemde; Lalitha V Iyer; Dennis E Kyle; Andrew S Lemoff; R Kiplin Guy
Lead optimization of antimalarial propafenone analogues.

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All Publications

2012: Polly M Fordyce; Philipp Kimmig; Christopher S Nelson; David Pincus; Peter Walter; Hana El-Samad; Joe L DeRisi
Basic leucine zipper transcription factor Hac1 binds DNA in two distinct modes as revealed by microfluidic analyses.
Proceedings of the National Academy of Sciences of the United States of America 2012;109(45):E3084-93.
2012: Anthony O'Donoghue; Gang Qu; Jacob B Statnekov; Min Zhou; Marc O Anderson; Alma L Burlingame; Joe L DeRisi; A Alegra Eroy-Reveles; Alexander L Greninger; Daniel R Hostetter; Jessica Ingram; Giselle M Knudsen; David A Maltby; James H McKerrow; Charles S Craik
Global identification of peptidase specificity by multiplex substrate profiling.
Nature methods 2012;9(11):1095-100.
2012: David Lowes; Jon Mirsalis; Toufan Parman; Anupam Pradhan; Martina Sigal; Liang Tang; Emily Wilson; Fangyi Zhu; Julie A Clark; MC Connelly; Joe L DeRisi; Anna Furimsky; Jason Gow; W Armand Guiguemde; Lalitha V Iyer; Dennis E Kyle; Andrew S Lemoff; R Kiplin Guy
Lead optimization of antimalarial propafenone analogues.
Journal of medicinal chemistry 2012;55(13):6087-93.
2012: Deanna Lee; Ka-Cheung Luk; Ross Molinaro; Xiaoxing Qiu; Gerald Schochetman; Robert H Silverman; Graham Simmons; Imke Steffen; Ning Tang; Anatoly Urisman; Jaydip Das Gupta; Joe L DeRisi; Nicole Fischer; Don Ganem; Christina Gaughan; John Hackett; Eric A Klein; Miranda Broz; Charles Y Chiu
In-depth investigation of archival and prospectively collected samples reveals no evidence for XMRV infection in prostate cancer.
PloS one 2012;7(9):e44954.
2012: Mark D Stenglein; Eric Velazquez; Rebecca P Wilkes; Donald Ganem; Cheryl Greenacre; Melissa A Kennedy; Julia S Lankton; J Graham Ruby; Joe L DeRisi
Complete genome sequence of an astrovirus identified in a domestic rabbit (Oryctolagus cuniculus) with gastroenteritis.
Virology journal 2012;9():216.
2011: David J Lowes; Martina S Sigal; Emily B Wilson; Fangyi Zhu; Julie A Clark; MC Connelly; Joe L DeRisi; W Armand Guiguemde; Andrew S Lemoff; R Kiplin Guy
Optimization of propafenone analogues as antimalarial leads.
Journal of medicinal chemistry 2011;54(21):7477-85.
2011: Carol M Anderson; Stacy Y Chen; Joe L DeRisi; Michelle T Dimon; Ashwini Oke; Jennifer C Fung
ReCombine: a suite of programs for detection and analysis of meiotic recombination in whole-genome datasets.
PloS one 2011;6(10):e25509.
2011: Eunice C Chen; Steve A Miller; Joe L DeRisi; Charles Y Chiu
Using a pan-viral microarray assay (Virochip) to screen clinical samples for viral pathogens.
Journal of visualized experiments : JoVE 2011;(50):.
2010: Alexander L Greninger; Lori Holtz; Gagandeep Kang; Donald Ganem; David Wang; Joe L DeRisi
Serological evidence of human klassevirus infection.
Clinical and vaccine immunology : CVI 2010;17(10):1584-8.
2010: Don Ganem; Amy L Kistler; Joe L DeRisi
Achalasia and viral infection: new insights from veterinary medicine.
Science translational medicine 2010;2(33):33ps24.
2010: C Y Chiu; A L Greninger; E C Chen; T D Haggerty; J Parsonnet; Eric L Delwart; Joe L DeRisi; Don Ganem
Cultivation and serological characterization of a human Theiler's-like cardiovirus associated with diarrheal disease.
Journal of virology 2010;84(9):4407-14.
2010: Amy L Kistler; Jeanne M Smith; Alexander L Greninger; Joe L DeRisi; Don Ganem
Analysis of naturally occurring avian bornavirus infection and transmission during an outbreak of proventricular dilatation disease among captive psittacine birds.
Journal of virology 2010;84(4):2176-9.
2010: Michelle T Dimon; Katherine Sorber; Joe L DeRisi
HMMSplicer: a tool for efficient and sensitive discovery of known and novel splice junctions in RNA-Seq data.
PloS one 2010;5(11):e13875.
2009: Jacquin C Niles; Joe L DeRisi; Michael A Marletta
Inhibiting Plasmodium falciparum growth and heme detoxification pathway using heme-binding DNA aptamers.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(32):13266-71.
2009: Dale R Webster; Armin G Hekele; Adam S Lauring; Kael F Fischer; Hao Li; Raul Andino; Joe L DeRisi
An enhanced single base extension technique for the analysis of complex viral populations.
PloS one 2009;4(10):e7453.
2009: Ady Y Gancz; Amy L Kistler; Alexander L Greninger; Yigal Farnoushi; Sara Mechani; Shmuel Perl; Asaf Berkowitz; Noa Perez; Susan Clubb; Joe L DeRisi; Don Ganem; Avishai Lublin
Experimental induction of proventricular dilatation disease in cockatiels (Nymphicus hollandicus) inoculated with brain homogenates containing avian bornavirus 4.
Virology journal 2009;6():100.
2009: Alexander L Greninger; Charles Runckel; Charles Y Chiu; Thomas Haggerty; Julie Parsonnet; Donald Ganem; Joe L DeRisi
The complete genome of klassevirus - a novel picornavirus in pediatric stool.
Virology journal 2009;6():82.
2008: Charles Y Chiu; Alexander L Greninger; Kimberly Kanada; Thomas Kwok; Kael F Fischer; Charles Runckel; Janice K Louie; Carol A Glaser; Shigeo Yagi; David P Schnurr; Tom D Haggerty; Julie Parsonnet; Don Ganem; Joe L DeRisi
Identification of cardioviruses related to Theiler's murine encephalomyelitis virus in human infections.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(37):14124-9.
2008: Henry H Chang; Arnold M Falick; Peter Carlton; John W Sedat; Joe L DeRisi; Michael A Marletta
N-terminal processing of proteins exported by malaria parasites.
Molecular and biochemical parasitology 2008;160(2):107-15.
2008: Charles Y Chiu; Anatoly Urisman; Tara L Greenhow; Silvi Rouskin; Shigeo Yagi; David P Schnurr; Carolyn Wright; W Lawrence Drew; David Wang; Peggy S Weintrub; Joe L DeRisi; Don Ganem
Utility of DNA microarrays for detection of viruses in acute respiratory tract infections in children.
The Journal of pediatrics 2008;153(1):76-83.
2008: Katherine Sorber; Charles Chiu; Dale Webster; Michelle Dimon; J Graham Ruby; Armin Hekele; Joe L DeRisi
The long march: a sample preparation technique that enhances contig length and coverage by high-throughput short-read sequencing.
PloS one 2008;3(10):e3495.
2008: Amy L Kistler; Ady Gancz; Susan Clubb; Peter Skewes-Cox; Kael Fischer; Katherine Sorber; Charles Y Chiu; Avishai Lublin; Sara Mechani; Yigal Farnoushi; Alexander Greninger; Christopher C Wen; Scott B Karlene; Don Ganem; Joe L DeRisi
Recovery of divergent avian bornaviruses from cases of proventricular dilatation disease: identification of a candidate etiologic agent.
Virology journal 2008;5():88.
2007: Amy L Kistler; Pedro C Avila; Silvi Rouskin; David Wang; Theresa Ward; Shigeo Yagi; David P Schnurr; Don Ganem; Joe L DeRisi; Homer A Boushey
Pan-viral screening of respiratory tract infections in adults with and without asthma reveals unexpected human coronavirus and human rhinovirus diversity.
The Journal of infectious diseases 2007;196(6):817-25.
2007: Charles Y Chiu; Ash A Alizadeh; Silvi Rouskin; Jason D Merker; Elaine Yeh; Shigeo Yagi; David P Schnurr; Bruce K Patterson; Don Ganem; Joe L DeRisi
Diagnosis of a critical respiratory illness caused by human metapneumovirus by use of a pan-virus microarray.
Journal of clinical microbiology 2007;45(7):2340-3.
2007: Ashwini Jambhekar; Joe L DeRisi
Cis-acting determinants of asymmetric, cytoplasmic RNA transport.
RNA (New York, N.Y.) 2007;13(5):625-42.
2007: Beihua Dong; Sanggu Kim; Seunghee Hong; Jaydip Das Gupta; Krishnamurthy Malathi; Eric A Klein; Don Ganem; Joe L DeRisi; Samson A Chow; Robert H Silverman
An infectious retrovirus susceptible to an IFN antiviral pathway from human prostate tumors.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(5):1655-60.
2007: Jennifer L Shock; Kael F Fischer; Joe L DeRisi
Whole-genome analysis of mRNA decay in Plasmodium falciparum reveals a global lengthening of mRNA half-life during the intra-erythrocytic development cycle.
Genome biology 2007;8(7):R134.
2007: Amy L Kistler; Dale R Webster; Silvi Rouskin; vincent magrini; Joel J Credle; David P Schnurr; Homer A Boushey; Elaine R Mardis; Hao Li; Joe L DeRisi
Genome-wide diversity and selective pressure in the human rhinovirus.
Virology journal 2007;4():40.
2007: Emmitt R Jolly; Chen-Shan Chin; Steve Miller; Mahmoud Bahgat; Kee-Chong Lim; Joe L DeRisi; James H McKerrow
Gene expression patterns during adaptation of a helminth parasite to different environmental niches.
Genome biology 2007;8(4):R65.
2007: Ming Xiao; Angie Phong; Connie Ha; Ting-Fung Chan; Dongmei Cai; Lucinda Leung; Eunice Wan; Amy L Kistler; Joe L DeRisi; Paul R Selvin; Pui-Yan Kwok
Rapid DNA mapping by fluorescent single molecule detection.
Nucleic acids research 2007;35(3):e16.
2006: Charles Y Chiu; Silvi Rouskin; Anita Koshy; Anatoly Urisman; Kael Fischer; Shigeo Yagi; David P Schnurr; Paul B Eckburg; Lucy S Tompkins; Brian G Blackburn; Jason D Merker; Bruce K Patterson; Don Ganem; Joe L DeRisi
Microarray detection of human parainfluenzavirus 4 infection associated with respiratory failure in an immunocompetent adult.
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2006;43(8):e71-6.
2006: Erica L Dahl; Jennifer L Shock; Bhaskar R Shenai; Jiri Gut; Joe L DeRisi; Philip J Rosenthal
Tetracyclines specifically target the apicoplast of the malaria parasite Plasmodium falciparum.
Antimicrobial agents and chemotherapy 2006;50(9):3124-31.
2006: Peter B Madrid; Ally P Liou; Joe L DeRisi; R Kiplin Guy
Incorporation of an intramolecular hydrogen-bonding motif in the side chain of 4-aminoquinolines enhances activity against drug-resistant P. falciparum.
Journal of medicinal chemistry 2006;49(15):4535-43.
2006: John R S Newman; Sina Ghaemmaghami; Jan Ihmels; David K Breslow; Matthew Noble; Joe L DeRisi; Jonathan S Weissman
Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise.
Nature 2006;441(7095):840-6.
2006: Jennifer L Weisman; Ally P Liou; Anang A Shelat; Fred Cohen; R Kiplin Guy; Joe L DeRisi
Searching for new antimalarial therapeutics amongst known drugs.
Chemical biology & drug design 2006;67(6):409-16.
2006: Brian M Green; Richard J Morreale; Bilge Ozaydin; Joe L DeRisi; Joachim J Li
Genome-wide mapping of DNA synthesis in Saccharomyces cerevisiae reveals that mechanisms preventing reinitiation of DNA replication are not redundant.
Molecular biology of the cell 2006;17(5):2401-14.
2006: Anatoly Urisman; Ross J Molinaro; Nicole Fischer; Sarah J Plummer; Graham Casey; Eric A Klein; Krishnamurthy Malathi; Cristina Magi-Galluzzi; Raymond R Tubbs; Don Ganem; Robert H Silverman; Joe L DeRisi
Identification of a novel Gammaretrovirus in prostate tumors of patients homozygous for R462Q RNASEL variant.
PLoS pathogens 2006;2(3):e25.
2006: Marc O Anderson; John Sherrill; Peter B Madrid; Ally P Liou; Jennifer L Weisman; Joe L DeRisi; R Kiplin Guy
Parallel synthesis of 9-aminoacridines and their evaluation against chloroquine-resistant Plasmodium falciparum.
Bioorganic & medicinal chemistry 2006;14(2):334-43.
2006: Jingchun Zhu; Ashwini Jambhekar; Aaron Sarver; Joe L DeRisi
A Bayesian network driven approach to model the transcriptional response to nitric oxide in Saccharomyces cerevisiae.
PloS one 2006;1():e94.
2006: Manuel Llinás; Zbynek Bozdech; Edith D Wong; Alex T Adai; Joe L DeRisi
Comparative whole genome transcriptome analysis of three Plasmodium falciparum strains.
Nucleic acids research 2006;34(4):1166-73.
2005: Ashwini Jambhekar; Kimberly McDermott; Katherine Sorber; Kelly A Shepard; Ronald D Vale; Peter A Takizawa; Joe L DeRisi
Unbiased selection of localization elements reveals cis-acting determinants of mRNA bud localization in Saccharomyces cerevisiae.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(50):18005-10.
2005: Aaron Sarver; Joe L DeRisi
Fzf1p regulates an inducible response to nitrosative stress in Saccharomyces cerevisiae.
Molecular biology of the cell 2005;16(10):4781-91.
2005: Francesco Silvestrini; Zbynek Bozdech; Alessandra Lanfrancotti; Eugenia Di Giulio; Emanuele Bultrini; Leonardo Picci; Joe L DeRisi; Elisabetta Pizzi; Pietro Alano
Genome-wide identification of genes upregulated at the onset of gametocytogenesis in Plasmodium falciparum.
Molecular and biochemical parasitology 2005;143(1):100-10.
2005: Peter B Madrid; John Sherrill; Ally P Liou; Jennifer L Weisman; Joe L DeRisi; R Kiplin Guy
Synthesis of ring-substituted 4-aminoquinolines and evaluation of their antimalarial activities.
Bioorganic & medicinal chemistry letters 2005;15(4):1015-8.
2005: Anatoly Urisman; Kael F Fischer; Charles Y Chiu; Amy L Kistler; Shoshannah Beck; David Wang; Joe L DeRisi
E-Predict: a computational strategy for species identification based on observed DNA microarray hybridization patterns.
Genome biology 2005;6(9):R78.
2004: David J Galgoczy; Ann Cassidy-Stone; Manuel Llinás; Sean M O'Rourke; Ira Herskowitz; Joe L DeRisi; Alexander D Johnson
Genomic dissection of the cell-type-specification circuit in Saccharomyces cerevisiae.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(52):18069-74.
2004: Earl F Glynn; Paul C Megee; Hong-Guo Yu; Cathy Mistrot; Elçin Unal; Douglas Koshland; Joe L DeRisi; Jennifer L Gerton
Genome-wide mapping of the cohesin complex in the yeast Saccharomyces cerevisiae.
PLoS biology 2004;2(9):E259.
2004: Stewart A Weber; Jennifer L Gerton; Joan E Polancic; Joe L DeRisi; Douglas Koshland; Paul C Megee
The kinetochore is an enhancer of pericentric cohesin binding.
PLoS biology 2004;2(9):E260.
2004: Manuel Llinás; Joe L DeRisi
Pernicious plans revealed: Plasmodium falciparum genome wide expression analysis.
Current opinion in microbiology 2004;7(4):382-7.
2004: Peter B Madrid; Nathan T Wilson; Joe L DeRisi; R Kiplin Guy
Parallel synthesis and antimalarial screening of a 4-aminoquinoline library.
Journal of combinatorial chemistry 2004;6(3):437-42.
2003: David Wang; Anatoly Urisman; Yu-Tsueng Liu; Michael Springer; Thomas G Ksiazek; Dean D Erdman; Elaine R Mardis; Matthew Hickenbotham; vincent magrini; James Eldred; J Phillipe Latreille; Richard K Wilson; Don Ganem; Joe L DeRisi
Viral discovery and sequence recovery using DNA microarrays.
PLoS biology 2003;1(2):E2.
2003: Zbynek Bozdech; Manuel Llinás; Brian Lee Pulliam; Edith D Wong; Jingchun Zhu; Joe L DeRisi
The transcriptome of the intraerythrocytic developmental cycle of Plasmodium falciparum.
PLoS biology 2003;1(1):E5.
2003: Kelly A Shepard; André P Gerber; Ashwini Jambhekar; Peter A Takizawa; Patrick O Brown; Daniel Herschlag; Joe L DeRisi; Ronald D Vale
Widespread cytoplasmic mRNA transport in yeast: identification of 22 bud-localized transcripts using DNA microarray analysis.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(20):11429-34.
2003: Thomas G Ksiazek; Dean Erdman; Cynthia S Goldsmith; Sherif R Zaki; Teresa C T Peret; Shannon Emery; Suxiang Tong; Carlo Urbani; James A Comer; Wilina Lim; Pierre E Rollin; Scott F Dowell; Ai Ee Ling; Charles D Humphrey; Wun-Ju Shieh; Jeannette Guarner; Christopher D Paddock; Paul A Rota; Barry S Fields; Joe L DeRisi; Jyh-Yuan Yang; Nancy Cox; James Hughes; James LeDuc; William Joseph Bellini; Larry J Anderson
A novel coronavirus associated with severe acute respiratory syndrome.
The New England journal of medicine 2003;348(20):1953-66.
2003: C D Smith; D L Smith; Joe L DeRisi; Elizabeth H Blackburn
Telomeric protein distributions and remodeling through the cell cycle in Saccharomyces cerevisiae.
Molecular biology of the cell 2003;14(2):556-70.
2003: Zbynek Bozdech; Jingchun Zhu; marcin joachimiak; Fred Cohen; Brian Pulliam; Joe L DeRisi
Expression profiling of the schizont and trophozoite stages of Plasmodium falciparum with a long-oligonucleotide microarray.
Genome biology 2003;4(2):R9.
2002: Doron C Greenbaum; Amos Baruch; Munira Grainger; Zbynek Bozdech; Katalin F Medzihradszky; Juan Engel; Joe L DeRisi; Anthony A Holder; Matthew Bogyo
A role for the protease falcipain 1 in host cell invasion by the human malaria parasite.
Science (New York, N.Y.) 2002;298(5600):2002-6.
2002: David Wang; Laurent Coscoy; Maxine Zylberberg; Pedro C Avila; Homer A Boushey; Don Ganem; Joe L DeRisi
Microarray-based detection and genotyping of viral pathogens.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(24):15687-92.
2002: Andrew G Polson; David Wang; Joe L DeRisi; Don Ganem
Modulation of host gene expression by the constitutively active G protein-coupled receptor of Kaposi's sarcoma-associated herpesvirus.
Cancer research 2002;62(15):4525-30.
2002: Shivani Nautiyal; Joe L DeRisi; Elizabeth H Blackburn
The genome-wide expression response to telomerase deletion in Saccharomyces cerevisiae.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(14):9316-21.
2002: Jennifer L Gerton; Joe L DeRisi
Mnd1p: an evolutionarily conserved protein required for meiotic recombination.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(10):6895-900.
2002: Pradipsinh K Rathod; Karthikeyan Ganesan; Rhian E Hayward; Zbynek Bozdech; Joe L DeRisi
DNA microarrays for malaria.
Trends in parasitology 2002;18(1):39-45.
2001: Adam S Carroll; A C Bishop; Joe L DeRisi; Kevan M Shokat; Erin K O'Shea
Chemical inhibition of the Pho85 cyclin-dependent kinase reveals a role in the environmental stress response.
Proceedings of the National Academy of Sciences of the United States of America 2001;98(22):12578-83.
2001: L E Backhus; Joe L DeRisi; Linda F Bisson
Functional genomic analysis of a commercial wine strain of Saccharomyces cerevisiae under differing nitrogen conditions.
FEMS yeast research 2001;1(2):111-25.
2001: Joe L DeRisi
Overview of nucleic acid arrays.
Current protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.] 2001;Chapter 22():Unit 22.1.
2001: Rika Miki; Koji Kadota; Hidemasa Bono; Yosuke Mizuno; Yasuhiro Tomaru; piero carninci; Masayoshi Itoh; Kazuhiro Shibata; Jun Kawai; H Konno; S Watanabe; K Sato; Y Tokusumi; N Kikuchi; Y Ishii; Yohei Hamaguchi; Itaru Nishizuka; Hitoshi Goto; Hiroyuki Nitanda; S Satomi; A Yoshiki; M Kusakabe; Joe L DeRisi; Michael B Eisen; Vishwanath R Iyer; P O Brown; Masami Muramatsu; Hiroshi Shimada; Yasushi Okazaki; Yoshihide Hayashizaki
Delineating developmental and metabolic pathways in vivo by expression profiling using the RIKEN set of 18,816 full-length enriched mouse cDNA arrays.
Proceedings of the National Academy of Sciences of the United States of America 2001;98(5):2199-204.
2000: N Ogawa; Joe L DeRisi; Patrick O Brown
New components of a system for phosphate accumulation and polyphosphate metabolism in Saccharomyces cerevisiae revealed by genomic expression analysis.
Molecular biology of the cell 2000;11(12):4309-21.
2000: Peter A Takizawa; Joe L DeRisi; James E Wilhelm; Ronald D Vale
Plasma membrane compartmentalization in yeast by messenger RNA transport and a septin diffusion barrier.
Science (New York, N.Y.) 2000;290(5490):341-4.
2000: Jennifer L Gerton; Joe L DeRisi; Robert Shroff; Michael Lichten; Patrick O Brown; Thomas D Petes
Global mapping of meiotic recombination hotspots and coldspots in the yeast Saccharomyces cerevisiae.
Proceedings of the National Academy of Sciences of the United States of America 2000;97(21):11383-90.
2000: Arkady B Khodursky; Brian J Peter; M B Schmid; Joe L DeRisi; David Botstein; Patrick O Brown; Nicholas R Cozzarelli
Analysis of topoisomerase function in bacterial replication fork movement: use of DNA microarrays.
Proceedings of the National Academy of Sciences of the United States of America 2000;97(17):9419-24.
2000: R E Hayward; Joe L DeRisi; S Alfadhli; D C Kaslow; P O Brown; Pradipsinh K Rathod
Shotgun DNA microarrays and stage-specific gene expression in Plasmodium falciparum malaria.
Molecular microbiology 2000;35(1):6-14.
1999: M Wilson; Joe L DeRisi; H H Kristensen; P Imboden; S Rane; Patrick O Brown; Gary K Schoolnik
Exploring drug-induced alterations in gene expression in Mycobacterium tuberculosis by microarray hybridization.
Proceedings of the National Academy of Sciences of the United States of America 1999;96(22):12833-8.
1999: Joe L DeRisi; Vishwanath R Iyer
Genomics and array technology.
Current opinion in oncology 1999;11(1):76-9.
1998: L L Lutfiyya; V R Iyer; Joe L DeRisi; M J DeVit; P O Brown; Mark Johnston
Characterization of three related glucose repressors and genes they regulate in Saccharomyces cerevisiae.
Genetics 1998;150(4):1377-91.
1998: Matthew J Marton; Joe L DeRisi; Holly Bennett; Vishwanath R Iyer; Michael R Meyer; C J Roberts; Roland B Stoughton; Julja Burchard; D Slade; H Dai; D E Bassett; Leland H Hartwell; P O Brown; S H Friend
Drug target validation and identification of secondary drug target effects using DNA microarrays.
Nature medicine 1998;4(11):1293-301.
1998: S Chu; Joe L DeRisi; M Eisen; J Mulholland; David Botstein; Patrick O Brown; Ira Herskowitz
The transcriptional program of sporulation in budding yeast.
Science (New York, N.Y.) 1998;282(5389):699-705.
1998: Jennifer L Gerton; S Ohgi; M Olsen; Joe L DeRisi; Patrick O Brown
Effects of mutations in residues near the active site of human immunodeficiency virus type 1 integrase on specific enzyme-substrate interactions.
Journal of virology 1998;72(6):5046-55.
1997: DA Lashkari; Joe L DeRisi; John H McCusker; A F Namath; C Gentile; S Y Hwang; Patrick O Brown; Ronald W Davis
Yeast microarrays for genome wide parallel genetic and gene expression analysis.
Proceedings of the National Academy of Sciences of the United States of America 1997;94(24):13057-62.
1996: Joe L DeRisi; L Penland; Patrick O Brown; Michael Bittner; Paul S Meltzer; M Ray; Yidong Chen; Yan A Su; Jeffrey M. Trent
Use of a cDNA microarray to analyse gene expression patterns in human cancer.
Nature genetics 1996;14(4):457-60.
1994: L J Peck; M Bartilson; Joe L DeRisi
Bead-shift isolation of protein--DNA complexes on a 5S RNA gene.
Nucleic acids research 1994;22(3):443-9.