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Souvik Maiti

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TOP 3
Prachi Agarwala; Koyeli Mapa; Satyaprakash Pandey; Souvik Maiti
The G-quadruplex augments translation in the 5' untranslated region of transforming growth factor β2.
Teena Goel; Santosh Kumar; Souvik Maiti
Thermodynamics and solvation dynamics of BIV TAR RNA-Tat peptide interaction.
seema joshi; Souvik Maiti; Gopal S Bisht; Diwan S Rawat; Santosh Pasha
Comparative mode of action of novel hybrid peptide CS-1a and its rearranged amphipathic analogue CS-2a.

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All Publications

2013: Prachi Agarwala; Koyeli Mapa; Satyaprakash Pandey; Souvik Maiti
The G-quadruplex augments translation in the 5' untranslated region of transforming growth factor β2.
Biochemistry 2013;52(9):1528-38.
2013: Teena Goel; Santosh Kumar; Souvik Maiti
Thermodynamics and solvation dynamics of BIV TAR RNA-Tat peptide interaction.
Molecular bioSystems 2013;9(1):88-98.
2012: seema joshi; Souvik Maiti; Gopal S Bisht; Diwan S Rawat; Santosh Pasha
Comparative mode of action of novel hybrid peptide CS-1a and its rearranged amphipathic analogue CS-2a.
The FEBS journal 2012;279(20):3776-90.
2012: Deenan Santhiya; Maria G Miguel; Prasanta Kumar Das; Rita S Dias; Sounak Dutta; Björn Lindman; Souvik Maiti
Kinetic studies of amino acid-based surfactant binding to DNA.
The journal of physical chemistry. B 2012;116(20):5831-7.
2012: Hemant Suryawanshi; Mukesh Kumar Lalwani; Soundhar Ramasamy; Rajiv Rana; Vinod Scaria; Sridhar Sivasubbu; Souvik Maiti
Antagonism of microRNA function in zebrafish embryos by using locked nucleic acid enzymes (LNAzymes).
Chembiochem : a European journal of chemical biology 2012;13(4):584-9.
2012: Debojit Bose; Gopal Jayaraj; Prachi Agarwala; Rajkumar Banerjee; Subrata Kumar Pore; Hemant Suryawanshi; Souvik Maiti
The tuberculosis drug streptomycin as a potential cancer therapeutic: inhibition of miR-21 function by directly targeting its precursor.
Angewandte Chemie (International ed. in English) 2012;51(4):1019-23.
2012: Tani Agarwal; Prachi Agarwala; Gopal Jayaraj; Satya Prakash Pandey; Souvik Maiti
RNA G-quadruplexes: G-quadruplexes with "U" turns.
Current pharmaceutical design 2012;18(14):2102-11.
2012: Gopal Gunanathan Jayaraj; Satyaprakash Pandey; Vinod Scaria; Souvik Maiti
Potential G-quadruplexes in the human long non-coding transcriptome.
RNA biology 2012;9(1):81-6.
2011: Tani Agarwal; Santosh Kumar; Souvik Maiti
Unlocking G-quadruplex: Effect of unlocked nucleic acid on G-quadruplex stability.
Biochimie 2011;93(10):1694-700.
2011: Sonal Datta; Mohammad Parwez Alam; Neerja Wadhwa; Abhishek Kumar Mehta; Souvik Maiti; Neerja Wadhwa; Vani Brahmachari
Nucleosomal occupancy and CGG repeat expansion: a comparative analysis of triplet repeat region from mouse and human fragile X mental retardation gene 1.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 2011;19(4):445-55.
2011: Jameel Ahmad Khan; Tarun Kumar Mandal; Taposh Kumar Das; Yogendra Singh; Beena Pillai; Souvik Maiti
Magnetite (Fe3O4) nanocrystals affect the expression of genes involved in the TGF-beta signalling pathway.
Molecular bioSystems 2011;7(5):1481-6.
2011: Yumnam Silla; Balasubramanian Chandamouli; Souvik Maiti; Shantanu Sengupta
A single nucleotide polymorphism in transcobalamin II (I5V) induces structural changes in the protein as revealed by molecular modeling studies.
Biochemistry 2011;50(8):1396-402.
2011: Souvik Maiti
Nanotoxicity of gold and iron nanoparticles.
Journal of biomedical nanotechnology 2011;7(1):65.
2011: Santosh Kumar; Koyeli Mapa; Harshana Sabharwal; Hemant Suryawanshi; Debojit Bose; Souvik Maiti
Specificity of RSG-1.2 peptide binding to RRE-IIB RNA element of HIV-1 over Rev peptide is mainly enthalpic in origin.
PloS one 2011;6(8):e23300.
2010: Chandramouli Balasubramanian; Rajendra Prasad Ojha; Souvik Maiti; Alessandro Desideri
Sampling the structure of the noncanonical lin-4:lin-14 microRNA:mRNA complex by molecular dynamics simulations.
The journal of physical chemistry. B 2010;114(49):16443-9.
2010: Harleen Kaur; Vinod Scaria; Souvik Maiti
“Locked onto the target”: increasing the efficiency of antagomirzymes using locked nucleic acid modifications.
Biochemistry 2010;49(44):9449-56.
2010: Hemant Suryawanshi; Vinod Scaria; Souvik Maiti
Modulation of microRNA function by synthetic ribozymes.
Molecular bioSystems 2010;6(10):1807-9.
2010: seema joshi; Gopal Singh Bisht; Diwan S Rawat; Anil Kumar; Rita Kumar; Souvik Maiti; Santosh Pasha
Interaction studies of novel cell selective antimicrobial peptides with model membranes and E. coli ATCC 11775.
Biochimica et biophysica acta 2010;1798(10):1864-75.
2010: Tani Agarwal; Saumya Roy; Tushar Kanti Chakraborty; Souvik Maiti
Selective targeting of G-quadruplex using furan-based cyclic homooligopeptides: effect on c-MYC expression.
Biochemistry 2010;49(38):8388-97.
2010: Hemant Suryawanshi; Harshana Sabharwal; Souvik Maiti
Thermodynamics of peptide-RNA recognition: the binding of a Tat peptide to TAR RNA.
The journal of physical chemistry. B 2010;114(34):11155-63.
2010: Tani Agarwal; Saumya Roy; Tushar Kanti Chakraborty; Souvik Maiti
Furan based cyclic homo-oligopeptides bind G-quadruplex selectively and repress c-MYC transcription.
Bioorganic & medicinal chemistry letters 2010;20(15):4346-9.
2010: Deenan Santhiya; Souvik Maiti
An investigation on interaction between 14mer DNA oligonucleotide and CTAB by fluorescence and fluorescence resonance energy transfer studies.
The journal of physical chemistry. B 2010;114(22):7602-8.
2010: Souvik Maiti
Human telomeric G-quadruplex.
The FEBS journal 2010;277(5):1097.
2009: Deenan Santhiya; Rita S Dias; Anshupriya Shome; Prasanta Kumar Das; Maria G Miguel; Björn Lindman; Souvik Maiti
Role of linker groups between hydrophilic and hydrophobic moieties of cationic surfactants on oligonucleotide-surfactant interactions.
Langmuir : the ACS journal of surfaces and colloids 2009;25(24):13770-5.
2009: Amit Arora; Souvik Maiti
Differential biophysical behavior of human telomeric RNA and DNA quadruplex.
The journal of physical chemistry. B 2009;113(30):10515-20.
2009: Amit Arora; Divya R Nair; Souvik Maiti
Effect of flanking bases on quadruplex stability and Watson-Crick duplex competition.
The FEBS journal 2009;276(13):3628-40.
2009: Amit Arora; Souvik Maiti
Stability and molecular recognition of quadruplexes with different loop length in the absence and presence of molecular crowding agents.
The journal of physical chemistry. B 2009;113(25):8784-92.
2009: Niti Kumar; Richa Basundra; Souvik Maiti
Elevated polyamines induce c-MYC overexpression by perturbing quadruplex-WC duplex equilibrium.
Nucleic acids research 2009;37(10):3321-31.
2009: Niti Kumar; Michael Petersen; Souvik Maiti
Tunable c-MYC LNA i-motif.
Chemical communications (Cambridge, England) 2009;(12):1532-4.
2009: Harleen Kaur; Amit Arora; K Gogoi; P Solanke; Anita D Gunjal; Vaijayanti A Kumar; Souvik Maiti
Effects for the incorporation of five-atom thioacetamido nucleic acid (TANA) backbone on hybridization thermodynamics and kinetics of DNA duplexes.
The journal of physical chemistry. B 2009;113(9):2944-51.
2009: Kshitij Gupta; Vijay P Singh; Raj K Kurupati; Anita Mann; MUNIA gaNGULI; Yogendra K Gupta; Yogendra Singh; Kishwar Saleem; Santosh Pasha; Souvik Maiti
Nanoparticles of cationic chimeric peptide and sodium polyacrylate exhibit striking antinociception activity at lower dose.
Journal of controlled release : official journal of the Controlled Release Society 2009;134(1):47-54.
2009: Mahantappa Halimani; S Prathap Chandran; Sudhir Kashyap; V M Jadhav; B L V Prasad; Srinivas Hotha; Souvik Maiti
Dendritic effect of ligand-coated nanoparticles: enhanced apoptotic activity of silica-berberine nanoconjugates.
Langmuir : the ACS journal of surfaces and colloids 2009;25(4):2339-47.
2009: Vaibhav M Jadhav; Vinod Scaria; Souvik Maiti
Antagomirzymes: oligonucleotide enzymes that specifically silence microRNA function.
Angewandte Chemie (International ed. in English) 2009;48(14):2557-60.
2008: Niti Kumar; Ashok Patowary; Sridhar Sivasubbu; Michael Petersen; Souvik Maiti
Silencing c-MYC expression by targeting quadruplex in P1 promoter using locked nucleic acid trap.
Biochemistry 2008;47(50):13179-88.
2008: Abid R Mattoo; Amit Arora; Souvik Maiti; Yogendra Singh
Identification, characterization and activation mechanism of a tyrosine kinase of Bacillus anthracis.
The FEBS journal 2008;275(24):6237-47.
2008: Niti Kumar; Souvik Maiti
A thermodynamic overview of naturally occurring intramolecular DNA quadruplexes.
Nucleic acids research 2008;36(17):5610-22.
2008: Amit Arora; Chandramouli Balasubramanian; Niti Kumar; Saurabh Agrawal; Rajendra P Ojha; Souvik Maiti
Binding of berberine to human telomeric quadruplex - spectroscopic, calorimetric and molecular modeling studies.
The FEBS journal 2008;275(15):3971-83.
2008: Niti Kumar; Bankanidhi Sahoo; K A S Varun; Souvik Maiti; Souvik Maiti
Effect of loop length variation on quadruplex-Watson Crick duplex competition.
Nucleic acids research 2008;36(13):4433-42.
2008: Vaibhav Jadhav; Souvik Maiti; Antara Dasgupta; Prasanta Kumar Das; Rita S Dias; Maria G Miguel; Björn Lindman
Effect of the head-group geometry of amino acid-based cationic surfactants on interaction with plasmid DNA.
Biomacromolecules 2008;9(7):1852-9.
2008: Saurabh Agrawal; Rajendra Prasad Ojha; Souvik Maiti
Energetics of the human Tel-22 quadruplex-telomestatin interaction: a molecular dynamics study.
The journal of physical chemistry. B 2008;112(22):6828-36.
2008: Elayanambi Sundaramoorthy ; Souvik Maiti; Samir K Brahmachari; Shantanu Sengupta
Predicting protein homocysteinylation targets based on dihedral strain energy and pKa of cysteines.
Proteins 2008;71(3):1475-83.
2008: Niti Kumar; Swati Shukla; Sanjiv Kumar; Anju Suryawanshi; Uma Chaudhry; Srinivasan Ramachandran; Souvik Maiti
Intrinsically disordered protein from a pathogenic mesophile Mycobacterium tuberculosis adopts structured conformation at high temperature.
Proteins 2008;71(3):1123-33.
2008: Abid R Mattoo; Mohd Saif Zaman; Gyanendra P Dubey; Amit Arora; Azeet Narayan; Noor Jailkhani; Kusum Rathore; Souvik Maiti; Yogendra Singh
Spo0B of Bacillus anthracis - a protein with pleiotropic functions.
The FEBS journal 2008;275(4):739-52.
2008: Harleen Kaur; Jesper Wengel; Souvik Maiti
Thermodynamics of DNA-RNA heteroduplex formation: effects of locked nucleic acid nucleotides incorporated into the DNA strand.
Biochemistry 2008;47(4):1218-27.
2008: Kuljeet Singh Sandhu; Sunil Pandey; Souvik Maiti; Beena Pillai
GASCO: genetic algorithm simulation for codon optimization.
In silico biology 2008;8(2):187-92.
2008: Harleen Kaur; Amit Arora; Jesper Wengel; Souvik Maiti
Thermodynamic, counterion and hydration effects for the incorporation of locked nucleic acid (LNA) nucleotides in duplex.
Nucleic acids symposium series (2004) 2008;(52):425-6.
2008: Amit Arora; Harleen Kaur; Jesper Wengel; Souvik Maiti
Effect of locked nucleic acid (LNA) modification on hybridization kinetics of DNA duplex.
Nucleic acids symposium series (2004) 2008;(52):417-8.
2008: Niti Kumar; Souvik Maiti
Role of molecular crowding in perturbing quadruplex-Watson Crick duplex equilibrium.
Nucleic acids symposium series (2004) 2008;(52):157-8.
2007: Vinod Scaria; Manoj Hariharan; Beena Pillai; Souvik Maiti; Samir K Brahmachari
Host-virus genome interactions: macro roles for microRNAs.
Cellular microbiology 2007;9(12):2784-94.
2007: Tushar Kanti Chakraborty; Amit Arora; Saumya Roy; Niti Kumar; Souvik Maiti
Furan based cyclic oligopeptides selectively target G-quadruplex.
Journal of medicinal chemistry 2007;50(23):5539-42.
2007: Harleen Kaur; B Ravindra Babu; Souvik Maiti
Perspectives on chemistry and therapeutic applications of Locked Nucleic Acid (LNA).
Chemical reviews 2007;107(11):4672-97.
2007: Niti Kumar; Souvik Maiti
Role of locked nucleic acid modified complementary strand in quadruplex/Watson-Crick duplex equilibrium.
The journal of physical chemistry. B 2007;111(42):12328-37.
2007: Antara Dasgupta; Prasanta Kumar Das; Rita S Dias; Maria G Miguel; Björn Lindman; Vaibhav M Jadhav; Muthaiah Gnanamani; Souvik Maiti
Effect of headgroup on DNA-cationic surfactant interactions.
The journal of physical chemistry. B 2007;111(29):8502-8.
2007: Jameel Ahmad Khan; Beena Pillai; Taposh Kumar Das; Yogendra Singh; Souvik Maiti
Molecular effects of uptake of gold nanoparticles in HeLa cells.
Chembiochem : a European journal of chemical biology 2007;8(11):1237-40.
2007: Chandramouli Balasubramanian; Rajendra Prasad Ojha; Souvik Maiti
Hydration pattern of A4T4 and T4A4 DNA: a molecular dynamics study.
Biochemical and biophysical research communications 2007;355(4):1081-6.
2007: Harleen Kaur; Jesper Wengel; Souvik Maiti
LNA-modified oligonucleotides effectively drive intramolecular-stable hairpin to intermolecular-duplex state.
Biochemical and biophysical research communications 2007;352(1):118-22.
2007: Niti Kumar; Jakob T Nielsen; Souvik Maiti; Michael Petersen
i-Motif formation with locked nucleic acid (LNA).
Angewandte Chemie (International ed. in English) 2007;46(48):9220-2.
2006: Rajesh Kumar Kainthan; Muthiah Gnanamani; MUNIA gaNGULI; Tanay Ghosh; Donald E Brooks; Souvik Maiti; Jayachandran N Kizhakkedathu
Blood compatibility of novel water soluble hyperbranched polyglycerol-based multivalent cationic polymers and their interaction with DNA.
Biomaterials 2006;27(31):5377-90.
2006: Kashif Hanif; Kshitij Gupta; Suparna Gupta; Y K Gupta; Souvik Maiti; Santosh Pasha
Chimeric peptide of met-enkephalin and FMRFa: effect of chlorination on conformation and analgesia.
Neuroscience letters 2006;403(1-2):131-5.
2006: Vinod Scaria; Manoj Hariharan; Amit Arora; Souvik Maiti
Quadfinder: server for identification and analysis of quadruplex-forming motifs in nucleotide sequences.
Nucleic acids research 2006;34(Web Server issue):W683-5.
2006: Harleen Kaur; Amit Arora; Jesper Wengel; Souvik Maiti
Thermodynamic, counterion, and hydration effects for the incorporation of locked nucleic acid nucleotides into DNA duplexes.
Biochemistry 2006;45(23):7347-55.
2006: Jameel Ahmad Khan; Rajesh Kumar Kainthan; MUNIA gaNGULI; Jayachandran N Kizhakkedathu; Yogendra Singh; Souvik Maiti
Water soluble nanoparticles from PEG-based cationic hyperbranched polymer and RNA that protect RNA from enzymatic degradation.
Biomacromolecules 2006;7(5):1386-8.
2006: Kshitij Gupta; MUNIA gaNGULI; Santosh Pasha; Souvik Maiti
Nanoparticle formation from poly(acrylic acid) and oppositely charged peptides.
Biophysical chemistry 2006;119(3):303-6.
2006: Gita Masand; Kashif Hanif; Somdutta Sen; Aarif Ahsan; Souvik Maiti; Santosh Pasha
Synthesis, conformational and pharmacological studies of glycosylated chimeric peptides of Met-enkephalin and FMRFa.
Brain research bulletin 2006;68(5):329-34.
2006: Niti Kumar; Katrine E Nielsen; Souvik Maiti; Michael Petersen
Triplex formation with alpha-L-LNA (alpha-L-ribo-configured locked nucleic acid).
Journal of the American Chemical Society 2006;128(1):14-5.
2006: Rachit Bakshi; Abhishek Kumar Mehta; Ritu Sharma; Souvik Maiti; Santosh Pasha; Vani Brahmachari
Characterization of a human SWI2/SNF2 like protein hINO80: demonstration of catalytic and DNA binding activity.
Biochemical and biophysical research communications 2006;339(1):313-20.
2006: Vinod Scaria; Manoj Hariharan; Souvik Maiti; Beena Pillai; Samir K Brahmachari
Host-virus interaction: a new role for microRNAs.
Retrovirology 2006;3():68.
2006: Thomas R Porter; Feng Xie; Derek Knapp; Patrick Iversen; Luis A Marky; Jeane M Tsutsui; Souvik Maiti; John Lof; Stanley J Radio; Nicholas Kipshidze
Targeted vascular delivery of antisense molecules using intravenous microbubbles.
Cardiovascular revascularization medicine : including molecular interventions 2006;7(1):25-33.
2005: Praveen Kumar; Anjali Verma; Souvik Maiti; Raimundo Gargallo; shantanu chowdhury
Tetraplex DNA transitions within the human c-myc promoter detected by multivariate curve resolution of fluorescence resonance energy transfer.
Biochemistry 2005;44(50):16426-34.
2005: Sreenivas Chavali; Anubha Mahajan; Rubina Tabassum; Souvik Maiti; Dwaipayan Bharadwaj
Oligonucleotide properties determination and primer designing: a critical examination of predictions.
Bioinformatics (Oxford, England) 2005;21(20):3918-25.
2005: Jayachandran N Kizhakkedathu; CK Nisha; Sunkara V Manorama; Souvik Maiti
Water-soluble nanoparticles from random copolymer and oppositely charged surfactant, 3a. Nanoparticles of poly(ethylene glycol)-based cationic random copolymer and fatty acid salts.
Macromolecular bioscience 2005;5(6):549-58.
2005: Niti Kumar; Souvik Maiti
The effect of osmolytes and small molecule on Quadruplex-WC duplex equilibrium: a fluorescence resonance energy transfer study.
Nucleic acids research 2005;33(21):6723-32.
2004: CK Nisha; Sunkara V Manorama; Jayachandran N Kizhakkedathu; Souvik Maiti
Water-soluble complexes from random copolymer and oppositely charged surfactant. 2. Complexes of poly(ethylene glycol)-based cationic random copolymer and bile salts.
Langmuir : the ACS journal of surfaces and colloids 2004;20(20):8468-75.
2004: Vidhi Mathur; Anjali Verma; Souvik Maiti; shantanu chowdhury
Thermodynamics of i-tetraplex formation in the nuclease hypersensitive element of human c-myc promoter.
Biochemical and biophysical research communications 2004;320(4):1220-7.
2004: Niti Kumar; Souvik Maiti
Quadruplex to Watson-Crick duplex transition of the thrombin binding aptamer: a fluorescence resonance energy transfer study.
Biochemical and biophysical research communications 2004;319(3):759-67.
2004: MUNIA gaNGULI; J Venkatesh Babu; Souvik Maiti
Complex formation between cationically modified gold nanoparticles and DNA: an atomic force microscopic study.
Langmuir : the ACS journal of surfaces and colloids 2004;20(13):5165-70.
2004: CK Nisha; Sunkara V Manorama; MUNIA gaNGULI; Souvik Maiti; Jayachandran N Kizhakkedathu
Complexes of poly(ethylene glycol)-based cationic random copolymer and calf thymus DNA: a complete biophysical characterization.
Langmuir : the ACS journal of surfaces and colloids 2004;20(6):2386-96.
2004: MUNIA gaNGULI; Kizhakkedathu N Jayachandran; Souvik Maiti
Nanoparticles from cationic copolymer and DNA that are soluble and stable in common organic solvents.
Journal of the American Chemical Society 2004;126(1):26-7.
2003: Souvik Maiti; N K Chaudhury; shantanu chowdhury
Hoechst 33258 binds to G-quadruplex in the promoter region of human c-myc.
Biochemical and biophysical research communications 2003;310(2):505-12.
2003: Srinivasa R Cheruku; Souvik Maiti; Arnulf Dorn; Bernard Scorneaux; Apurba K Bhattacharjee; William Y Ellis; Jonathan L Vennerstrom
Carbon isosteres of the 4-aminopyridine substructure of chloroquine: effects on pK(a), hematin binding, inhibition of hemozoin formation, and parasite growth.
Journal of medicinal chemistry 2003;46(14):3166-9.
2003: P Basak; CK Nisha; Sunkara V Manorama; Souvik Maiti; K N Jayachandran
Probing the association behavior of poly(ethylene glycol)-based amphiphilic comb-like polymer in NaCl solution.
Journal of colloid and interface science 2003;262(2):560-5.