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Herbert Oberacher

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Genes & Molecular Sequences

Single Nucleotide Polymorphism

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TOP 3
Herbert Oberacher; Birthe Schubert; Kathrin Libiseller; Anna Schweissgut
Detection and identification of drugs and toxicants in human body fluids by liquid chromatography-tandem mass spectrometry under data-dependent acquisition control and automated database search.
Herbert Oberacher; Bernd Berger; Graeme Whitley; Wolfgang Weinmann
Testing an alternative search algorithm for compound identification with the 'Wiley Registry of Tandem Mass Spectral Data, MSforID'.
Herbert Oberacher; Graeme Whitley; Bernd Berger
Evaluation of the sensitivity of the 'Wiley registry of tandem mass spectral data, MSforID' with MS/MS data of the 'NIST/NIH/EPA mass spectral library'.

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All Publications

2013: Herbert Oberacher; Birthe Schubert; Kathrin Libiseller; Anna Schweissgut
Detection and identification of drugs and toxicants in human body fluids by liquid chromatography-tandem mass spectrometry under data-dependent acquisition control and automated database search.
Analytica chimica acta 2013;770():121-31.
2013: Herbert Oberacher; Bernd Berger; Graeme Whitley; Wolfgang Weinmann
Testing an alternative search algorithm for compound identification with the 'Wiley Registry of Tandem Mass Spectral Data, MSforID'.
Journal of mass spectrometry : JMS 2013;48(4):497-504.
2013: Herbert Oberacher; Graeme Whitley; Bernd Berger
Evaluation of the sensitivity of the 'Wiley registry of tandem mass spectral data, MSforID' with MS/MS data of the 'NIST/NIH/EPA mass spectral library'.
Journal of mass spectrometry : JMS 2013;48(4):487-96.
2012: Robert Erb; Katharina Leithner; Andreas Bernkop-Schnürch; Herbert Oberacher
Phosphorothioate oligonucleotide quantification by μ-liquid chromatography-mass spectrometry.
The AAPS journal 2012;14(4):728-37.
2012: Beate Beer; Robert Erb; Kaarel Krjutškov; Triin Viltrop; Herbert Oberacher
A novel amplification strategy for genotyping with liquid chromatography-electrospray ionization mass spectrometry.
The Analyst 2012;137(22):5325-33.
2012: Sabine Plattner; Jean-Pierre Chervet; Robert Erb; Herbert Oberacher
Ascorbic acid for homogenous redox buffering in electrospray ionization-mass spectrometry.
Analytical and bioanalytical chemistry 2012;404(5):1571-9.
2012: Philipp Würtinger; Herbert Oberacher
Evaluation of the performance of a tandem mass spectral library with mass spectral data extracted from literature.
Drug testing and analysis 2012;4(3-4):235-41.
2012: Robert Erb; Florian Pitterl; Sabine Plattner; Hendrik-Jan Brouwer; Herbert Oberacher
An optimized electrochemistry-liquid chromatography-mass spectrometry method for studying guanosine oxidation.
Electrophoresis 2012;33(4):614-21.
2012: Herbert Oberacher; Florian Pitterl; Bernhard Poschner; Eleni Siapi; Barry R Steele; Franco Tagliaro; Silvi A Chacko; Rossella Gottardo; Sylvia Grosse; Thomas Letzel; Jonathan L Josephs
On the inter-instrument and the inter-laboratory transferability of a tandem mass spectral reference library. 3. Focus on ion trap and upfront CID.
Journal of mass spectrometry : JMS 2012;47(2):263-70.
2012: Sabine Plattner; Florian Pitterl; Hendrik-Jan Brouwer; Robert Erb; Herbert Oberacher
Formation and characterization of covalent guanosine adducts with electrochemistry-liquid chromatography-mass spectrometry.
Journal of chromatography. B, Analytical technologies in the biomedical and life sciences 2012;883-884():198-204.
2012: Anne S Oberguggenberger; Birthe Schubert; Barbara Sperner-Unterweger; Monika Sztankay; Beate Beer; Eva Gamper; Johannes Giesinger; Bernhard Holzner; Georg Kemmler; Christian Marth; Verena Meraner; Herbert Oberacher; Michael Hubalek
Adherence evaluation of endocrine treatment in breast cancer: methodological aspects.
BMC cancer 2012;12():474.
2012: Harald Niederstätter; Herbert Oberacher; Florian Pitterl; Gerhard Rampl; Harald Schennach; Burkhard Berger; Daniel Erhart; Christoph Gassner; Isolde Hausner; Franz Neuhuber; Walther Parson
Pasture names with Romance and Slavic roots facilitate dissection of Y chromosome variation in an exclusively German-speaking alpine region.
PloS one 2012;7(7):e41885.
2011: Michaela Defrancesco; Eberhard A Deisenhammer; Hartmann Hinterhuber; Georg Kemmler; Harald Niederstätter; Herbert Oberacher; Walther Parson; Elisabeth M Weiss; Judith Bidner; Markus Canazei; Josef Marksteiner
Influence of serotonin transporter genotype and catechol-O-methyltransferase Val158Met polymorphism on recognition of emotional faces.
Journal of the International Neuropsychological Society : JINS 2011;17(6):1014-20.
2011: Anne Oberguggenberger; Barbara Sperner-Unterweger; Monika Sztankay; Beate Beer; Daniel Egle; Eva-Maria Gamper; Johannes Giesinger; Michael Hubalek; Georg Kemmler; Verena Meraner; Herbert Oberacher; Bernhard Holzner
Is the toxicity of adjuvant aromatase inhibitor therapy underestimated? Complementary information from patient-reported outcomes (PROs).
Breast cancer research and treatment 2011;128(2):553-61.
2011: Birthe Schubert; Herbert Oberacher
Impact of solvent conditions on separation and detection of basic drugs by micro liquid chromatography-mass spectrometry under overloading conditions.
Journal of chromatography. A 2011;1218(22):3413-22.
2011: Herbert Oberacher; Wolfgang Weinmann; Sebastian Dresen
Quality evaluation of tandem mass spectral libraries.
Analytical and bioanalytical chemistry 2011;400(8):2641-8.
2011: Beate Beer; Robert Erb; Florian Pitterl; Harald Niederstätter; Olalla Maroñas; Alejandro Gesteira; Angel Carracedo; Irina Piatkov; Herbert Oberacher
CYP2D6 genotyping by liquid chromatography-electrospray ionization mass spectrometry.
Analytical and bioanalytical chemistry 2011;400(8):2361-70.
2010: Florian Pitterl; Konrad Schmidt; Gabriela Huber; Bettina Zimmermann; Rhena Delport; Sylvain Amory; Bertrand Ludes; Herbert Oberacher; Walther Parson
Increasing the discrimination power of forensic STR testing by employing high-performance mass spectrometry, as illustrated in indigenous South African and Central Asian populations.
International journal of legal medicine 2010;124(6):551-8.
2010: Beate Beer; Kathrin Libiseller; Herbert Oberacher; Marion Pavlic
A fatal intoxication case involving topiramate.
Forensic science international 2010;202(1-3):e9-11.
2010: Beate Beer; Birthe Schubert; Anne Oberguggenberger; Verena Meraner; Michael Hubalek; Herbert Oberacher
Development and validation of a liquid chromatography-tandem mass spectrometry method for the simultaneous quantification of tamoxifen, anastrozole, and letrozole in human plasma and its application to a clinical study.
Analytical and bioanalytical chemistry 2010;398(4):1791-800.
2010: Florian Pitterl; Jean-Pierre Chervet; Herbert Oberacher
Electrochemical simulation of oxidation processes involving nucleic acids monitored with electrospray ionization-mass spectrometry.
Analytical and bioanalytical chemistry 2010;397(3):1203-15.
2010: Marion Pavlic; Birthe Schubert; Kathrin Libiseller; Herbert Oberacher
Comprehensive identification of active compounds in tablets by flow-injection data-dependent tandem mass spectrometry combined with library search.
Forensic science international 2010;197(1-3):40-7.
2010: Herbert Oberacher
Frontiers of mass spectrometry in nucleic acids analysis.
European journal of mass spectrometry (Chichester, England) 2010;16(3):351-65.
2009: Herbert Oberacher; Florian Pitterl
On the use of ESI-QqTOF-MS/MS for the comparative sequencing of nucleic acids.
Biopolymers 2009;91(6):401-9.
2009: Anne Baumann; Wiebke Lohmann; Birthe Schubert; Herbert Oberacher; Uwe Karst
Metabolic studies of tetrazepam based on electrochemical simulation in comparison to in vivo and in vitro methods.
Journal of chromatography. A 2009;1216(15):3192-8.
2009: Herbert Oberacher; Marion Pavlic; Kathrin Libiseller; Birthe Schubert; Michael Sulyok; Rainer Schuhmacher; Edina Csaszar; Harald Köfeler
On the inter-instrument and inter-laboratory transferability of a tandem mass spectral reference library: 1. Results of an Austrian multicenter study.
Journal of mass spectrometry : JMS 2009;44(4):485-93.
2009: Herbert Oberacher; Marion Pavlic; Kathrin Libiseller; Birthe Schubert; Michael Sulyok; Rainer Schuhmacher; Edina Csaszar; Harald Köfeler
On the inter-instrument and the inter-laboratory transferability of a tandem mass spectral reference library: 2. Optimization and characterization of the search algorithm.
Journal of mass spectrometry : JMS 2009;44(4):494-502.
2008: Florian Pitterl; Harald Niederstätter; Gabriela Huber; Bettina Zimmermann; Herbert Oberacher; Walther Parson
The next generation of DNA profiling--STR typing by multiplexed PCR--ion-pair RP LC-ESI time-of-flight MS.
Electrophoresis 2008;29(23):4739-50.
2008: Birthe Schubert; Marion Pavlic; Kathrin Libiseller; Herbert Oberacher
Unraveling the metabolic transformation of tetrazepam to diazepam with mass spectrometric methods.
Analytical and bioanalytical chemistry 2008;392(7-8):1299-308.
2008: Herbert Oberacher; Florian Pitterl; Gabriela Huber; Harald Niederstätter; Martin Steinlechner; Walther Parson
Increased forensic efficiency of DNA fingerprints through simultaneous resolution of length and nucleotide variability by high-performance mass spectrometry.
Human mutation 2008;29(3):427-32.
2007: Herbert Oberacher; Walther Parson
Forensic DNA fingerprinting by liquid chromatography-electrospray ionization mass spectrometry.
BioTechniques 2007;43(4):vii-xiii.
2007: Elisabeth M Weiss; Edith Stadelmann; Christian G Kohler; Colleen Brensinger; Karen A Nolan; Herbert Oberacher; Walther Parson; Florian Pitterl; Harald Niederstätter; Georg Kemmler; Hartmann Hinterhuber; Josef Marksteiner
Differential effect of catechol-O-methyltransferase Val158Met genotype on emotional recognition abilities in healthy men and women.
Journal of the International Neuropsychological Society : JINS 2007;13(5):881-7.
2007: Herbert Oberacher; Harald Niederstätter; Walther Parson
Liquid chromatography-electrospray ionization mass spectrometry for simultaneous detection of mtDNA length and nucleotide polymorphisms.
International journal of legal medicine 2007;121(1):57-67.
2006: Herbert Oberacher; Harald Niederstätter; Florian Pitterl; Walther Parson
Profiling 627 mitochondrial nucleotides via the analysis of a 23-plex polymerase chain reaction by liquid chromatography-electrospray ionization time-of-flight mass spectrometry.
Analytical chemistry 2006;78(22):7816-27.
2006: Marion Pavlic; Kathrin Libiseller; Herbert Oberacher
Combined use of ESI-QqTOF-MS and ESI-QqTOF-MS/MS with mass-spectral library search for qualitative analysis of drugs.
Analytical and bioanalytical chemistry 2006;386(1):69-82.
2006: Herbert Oberacher; Florian Pitterl; Harald Niederstätter; Elisabeth M Weiss; Edith Stadelmann; Josef Marksteiner; Walther Parson
Direct molecular haplotyping of multiple polymorphisms within exon 4 of the human catechol-O-methyltransferase gene by liquid chromatography-electrospray ionization time-of-flight mass spectrometry.
Analytical and bioanalytical chemistry 2006;386(1):83-91.
2006: Hansjörg Toll; Peter Berger; Andreas Hofmann; Andreas Hildebrandt; Herbert Oberacher; Hans-Peter Lenhof; Christian G. Huber
Glycosylation patterns of human chorionic gonadotropin revealed by liquid chromatography-mass spectrometry and bioinformatics.
Electrophoresis 2006;27(13):2734-46.
2006: Herbert Oberacher; Harald Niederstätter; Christian G. Huber; Walther Parson
Accurate determination of allelic frequencies in mitochondrial DNA mixtures by electrospray ionization time-of-flight mass spectrometry.
Analytical and bioanalytical chemistry 2006;384(5):1155-63.
2006: Herbert Oberacher; Harald Niederstätter; Bruno Casetta; Walther Parson
Some guidelines for the analysis of genomic DNA by PCR-LC-ESI-MS.
Journal of the American Society for Mass Spectrometry 2006;17(2):124-9.
2005: Herbert Oberacher; Harald Niederstätter; Bruno Casetta; Walther Parson
Detection of DNA sequence variations in homo- and heterozygous samples via molecular mass measurements by electrospray ionization time-of-flight mass spectrometry.
Analytical chemistry 2005;77(15):4999-5008.
2005: Herbert Oberacher; Harald Niederstätter; Walther Parson
Characterization of synthetic nucleic acids by electrospray ionization quadrupole time-of-flight mass spectrometry.
Journal of mass spectrometry : JMS 2005;40(7):932-45.
2005: Hansjörg Toll; Herbert Oberacher; Remco Swart; Christian G. Huber
Separation, detection, and identification of peptides by ion-pair reversed-phase high-performance liquid chromatography-electrospray ionization mass spectrometry at high and low pH.
Journal of chromatography. A 2005;1079(1-2):274-86.
2005: Georg Hölzl; Herbert Oberacher; Stefan Pitsch; Alfred Stutz; Christian G. Huber
Analysis of biological and synthetic ribonucleic acids by liquid chromatography-mass spectrometry using monolithic capillary columns.
Analytical chemistry 2005;77(2):673-80.
2005: Harald Niederstätter; Burkhard Berger; Herbert Oberacher; Anita Brandstätter; Christian G. Huber; Walther Parson
Separate analysis of DYS385a and b versus conventional DYS385 typing: is there forensic relevance?
International journal of legal medicine 2005;119(1):1-9.
2004: Herbert Oberacher; Walther Parson; Georg Hölzl; Peter J Oefner; Christian G. Huber
Optimized suppression of adducts in polymerase chain reaction products for semi-quantitative SNP genotyping by liquid chromatography-mass spectrometry.
Journal of the American Society for Mass Spectrometry 2004;15(12):1897-906.
2004: Herbert Oberacher; Walther Parson; Peter J Oefner; Bettina M Mayr; Christian G. Huber
Applicability of tandem mass spectrometry to the automated comparative sequencing of long-chain oligonucleotides.
Journal of the American Society for Mass Spectrometry 2004;15(4):510-22.
2004: Herbert Oberacher; Andreas Premstaller; Christian G. Huber
Characterization of some physical and chromatographic properties of monolithic poly(styrene-co-divinylbenzene) columns.
Journal of chromatography. A 2004;1030(1-2):201-8.
2004: Juan J Sanchez; María Brión; Walther Parson; Alejandro J Blanco-Verea; Claus Børsting; María Victoria Lareu; Harald Niederstätter; Herbert Oberacher; Niels Morling; Angel Carracedo
Duplications of the Y-chromosome specific loci P25 and 92R7 and forensic implications.
Forensic science international 2004;140(2-3):241-50.
2004: Herbert Oberacher; Bettina M Mayr; Christian G. Huber
Automated de novo sequencing of nucleic acids by liquid chromatography-tandem mass spectrometry.
Journal of the American Society for Mass Spectrometry 2004;15(1):32-42.
2003: Herbert Oberacher; Christian G. Huber
Genotyping of single nucleotide polymorphisms by liquid chromatography-electrospray ionization mass spectrometry.
Analytical and bioanalytical chemistry 2003;376(3):292-4.
2003: Herbert Oberacher; Wolfgang Walcher; Christian G. Huber
Effect of instrument tuning on the detectabilityof biopolymers in electrospray ionization mass spectrometry.
Journal of mass spectrometry : JMS 2003;38(1):108-16.
2003: Herbert Oberacher; Christian G. Huber; Peter J Oefner
Mutation scanning by ion-pair reversed-phase high-performance liquid chromatography-electrospray ionization mass spectrometry (ICEMS).
Human mutation 2003;21(1):86-95.
2002: Wolfgang Walcher; Herbert Oberacher; Sonia Troiani; Georg Hölzl; Peter Oefner; Lello Zolla; Christian G. Huber
Monolithic capillary columns for liquid chromatography-electrospray ionization mass spectrometry in proteomic and genomic research.
Journal of chromatography. B, Analytical technologies in the biomedical and life sciences 2002;782(1-2):111-25.
2002: Burkhard Berger; Georg Hölzl; Herbert Oberacher; Harald Niederstätter; Christian G. Huber; Walther Parson
Single nucleotide polymorphism genotyping by on-line liquid chromatography-mass spectrometry in forensic science of the Y-chromosomal locus M9.
Journal of chromatography. B, Analytical technologies in the biomedical and life sciences 2002;782(1-2):89-97.
2002: Andreas Premstaller; Peter J Oefner; Herbert Oberacher; Christian G. Huber
Capillary array high-performance liquid chromatography of nucleic acids and proteins.
Analytical chemistry 2002;74(18):4688-93.
2002: Herbert Oberacher; Peter J Oefner; Georg Hölzl; Andreas Premstaller; K Davis; Christian G. Huber
Re-sequencing of multiple single nucleotide polymorphisms by liquid chromatography-electrospray ionization mass spectrometry.
Nucleic acids research 2002;30(14):e67.
2002: Andreas Premstaller; Herbert Oberacher; Andreas Rickert; Christian G. Huber; Peter J Oefner
Multiplex analysis of single-nucleotide extension products on a 16-capillary, denaturing, high-performance liquid chromatography array.
Genomics 2002;79(6):793-8.
2002: Herbert Oberacher; Bernd Wellenzohn; Christian G. Huber
Comparative sequencing of nucleic acids by liquid chromatography-tandem mass spectrometry.
Analytical chemistry 2002;74(1):211-8.
2001: Herbert Oberacher; Walther Parson; R Muhlmann; Christian G. Huber
Analysis of polymerase chain reaction products by on-line liquid chromatography-mass spectrometry for genotyping of polymorphic short tandem repeat loci.
Analytical chemistry 2001;73(21):5109-15.
2001: Andreas Premstaller; wenzhong xiao; Herbert Oberacher; M O'Keefe; D Stern; T Willis; Christian G. Huber; Peter J Oefner
Temperature-modulated array high-performance liquid chromatography.
Genome research 2001;11(11):1944-51.
2001: Christian G. Huber; Herbert Oberacher
Analysis of nucleic acids by on-line liquid chromatography-mass spectrometry.
Mass spectrometry reviews 2001;20(5):310-43.
2001: Andreas Premstaller; Herbert Oberacher; Wolfgang Walcher; Anna Maria Timperio; Lello Zolla; J P Chervet; N Cavusoglu; A van Dorsselaer; Christian G. Huber
High-performance liquid chromatography-electrospray ionization mass spectrometry using monolithic capillary columns for proteomic studies.
Analytical chemistry 2001;73(11):2390-6.
2001: Christian G. Huber; Andreas Premstaller; wenzhong xiao; Herbert Oberacher; Günther K Bonn; Peter J Oefner
Mutation detection by capillary denaturing high-performance liquid chromatography using monolithic columns.
Journal of biochemical and biophysical methods 2001;47(1-2):5-19.
2000: Herbert Oberacher; Alexander Krajete; Walther Parson; Christian G. Huber
Preparation and evaluation of packed capillary columns for the separation of nucleic acids by ion-pair reversed-phase high-performance liquid chromatography.
Journal of chromatography. A 2000;893(1):23-35.
2000: Andreas Premstaller; Herbert Oberacher; Christian G. Huber
High-performance liquid chromatography-electrospray ionization mass spectrometry of single- and double-stranded nucleic acids using monolithic capillary columns.
Analytical chemistry 2000;72(18):4386-93.