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Gábor Balázsi

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Publications

TOP 3
Dmitry Nevozhay; Tomasz Zal; Gábor Balázsi
Transferring a synthetic gene circuit from yeast to mammalian cells.
B Dutta; Gabriel N Hortobagyi; V Lazar; Gordon B Mills; L Pusztai; Y Qi; C Y Shiang; W F Symmans; Naoto T Ueno; B Wang; R Agarwal; F André; G Bianchini; Gábor Balázsi
A network-based, integrative study to identify core biological pathways that drive breast cancer clinical subtypes.
Sofie Claerhout; Jennifer Dennison; Bhaskar Dutta; Yiling Lu; Catherine Nguyen-Charles; Qinghua Yu; Shuangxing Yu; Fan Zhang; Gábor Balázsi; Wouter Bossuyt; Gordon B Mills
Abortive autophagy induces endoplasmic reticulum stress and cell death in cancer cells.

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All Publications

2013: Dmitry Nevozhay; Tomasz Zal; Gábor Balázsi
Transferring a synthetic gene circuit from yeast to mammalian cells.
Nature communications 2013;4():1451.
2012: B Dutta; Gabriel N Hortobagyi; V Lazar; Gordon B Mills; L Pusztai; Y Qi; C Y Shiang; W F Symmans; Naoto T Ueno; B Wang; R Agarwal; F André; G Bianchini; Gábor Balázsi
A network-based, integrative study to identify core biological pathways that drive breast cancer clinical subtypes.
British journal of cancer 2012;106(6):1107-16.
2012: Sofie Claerhout; Jennifer Dennison; Bhaskar Dutta; Yiling Lu; Catherine Nguyen-Charles; Qinghua Yu; Shuangxing Yu; Fan Zhang; Gábor Balázsi; Wouter Bossuyt; Gordon B Mills
Abortive autophagy induces endoplasmic reticulum stress and cell death in cancer cells.
PloS one 2012;7(6):e39400.
2012: Kyle H Rohde; Gábor Balázsi; Shannon Caldwell; Diogo F T Veiga; David G Russell
Linking the transcriptional profiles and the physiological states of Mycobacterium tuberculosis during an extended intracellular infection.
PLoS pathogens 2012;8(6):e1002769.
2012: Dmitry Nevozhay; Elizabeth Van Itallie; Rhys M Adams; Matthew R Bennett; Gábor Balázsi
Mapping the environmental fitness landscape of a synthetic gene circuit.
PLoS computational biology 2012;8(4):e1002480.
2011: Gábor Balázsi; Alexander van Oudenaarden; James J Collins
Cellular decision making and biological noise: from microbes to mammals.
Cell 2011;144(6):910-25.
2011: Dmitry Nevozhay; Rhys M Adams; Gábor Balázsi
Linearizer gene circuits with negative feedback regulation.
Methods in molecular biology (Clifton, N.J.) 2011;734():81-100.
2010: Gábor Balázsi
Network reconstruction reveals new links between aging and calorie restriction in yeast.
HFSP journal 2010;4(3-4):94-9.
2010: Kevin F Murphy; Rhys M Adams; xiao wang; Gábor Balázsi; James J Collins
Tuning and controlling gene expression noise in synthetic gene networks.
Nucleic acids research 2010;38(8):2712-26.
2010: Diogo F T Veiga; Bhaskar Dutta; Gábor Balázsi
Network inference and network response identification: moving genome-scale data to the next level of biological discovery.
Molecular bioSystems 2010;6(3):469-80.
2009: Dmitry Nevozhay; Rhys M Adams; Kevin F Murphy; Kresimir Josic; Gábor Balázsi
Negative autoregulation linearizes the dose-response and suppresses the heterogeneity of gene expression.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(13):5123-8.
2008: Jason Ernst; Qasim Beg; Krin A Kay; Gábor Balázsi; Zoltan N. Oltvai; Ziv Bar-Joseph
A semi-supervised method for predicting transcription factor-gene interactions in Escherichia coli.
PLoS computational biology 2008;4(3):e1000044.
2008: Gábor Balázsi; Allison P Heath; Lanbo Shi; Maria L Gennaro
The temporal response of the Mycobacterium tuberculosis gene regulatory network during growth arrest.
Molecular systems biology 2008;4():225.
2008: Gábor Balázsi
Statistical evaluation of genetic footprinting data.
Methods in molecular biology (Clifton, N.J.) 2008;416():355-9.
2007: J Rudi Strickler; Gábor Balázsi
Planktonic copepods reacting selectively to hydrodynamic disturbances.
Philosophical transactions of the Royal Society of London. Series B, Biological sciences 2007;362(1487):1947-58.
2007: Kevin F Murphy; Gábor Balázsi; James J Collins
Combinatorial promoter design for engineering noisy gene expression.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(31):12726-31.
2007: Gábor Balázsi; J J Collins
Taking the inventory inside single cells.
Nature chemical biology 2007;3(3):141-2.
2007: Gábor Balázsi; Zoltan N. Oltvai
A pitfall in series of microarrays: the position of probes affects the cross-correlation of gene expression profiles.
Methods in molecular biology (Clifton, N.J.) 2007;377():153-62.
2006: William J Blake; Gábor Balázsi; Michael A Kohanski; Farren J Isaacs; Kevin F Murphy; Yina Kuang; Charles R Cantor; David R Walt; James J Collins
Phenotypic consequences of promoter-mediated transcriptional noise.
Molecular cell 2006;24(6):853-65.
2005: Gábor Balázsi; Albert-László Barabási; Zoltan N. Oltvai
Topological units of environmental signal processing in the transcriptional regulatory network of Escherichia coli.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(22):7841-6.
2005: Gábor Balázsi; Zoltan N. Oltvai
Sensing your surroundings: how transcription-regulatory networks of the cell discern environmental signals.
Science's STKE : signal transduction knowledge environment 2005;2005(282):pe20.
2004: Xin Tong; John W Campbell; Gábor Balázsi; Krin A Kay; Barry L Wanner; Svetlana Y Gerdes; Zoltan N. Oltvai
Genome-scale identification of conditionally essential genes in E. coli by DNA microarrays.
Biochemical and biophysical research communications 2004;322(1):347-54.
2003: Svetlana Y Gerdes; M D Scholle; John W Campbell; Gábor Balázsi; Erzsébet Ravasz; Matthew D Daugherty; A L Somera; Nikos Kyrpides; Iain Anderson; M S Gelfand; A Bhattacharya; Vinayak Kapatral; Mark D'Souza; Mark V Baev; Yuri Grechkin; Faika Mseeh; Michael Fonstein; Ross Overbeek; A-L Barabási; Zoltan N. Oltvai; Andrei Osterman
Experimental determination and system level analysis of essential genes in Escherichia coli MG1655.
Journal of bacteriology 2003;185(19):5673-84.
2003: Gábor Balázsi; Krin A Kay; Albert-László Barabási; Zoltan N. Oltvai
Spurious spatial periodicity of co-expression in microarray data due to printing design.
Nucleic acids research 2003;31(15):4425-33.
2003: Gábor Balázsi; Ann H Cornell-Bell; Frank Moss
Increased phase synchronization of spontaneous calcium oscillations in epileptic human versus normal rat astrocyte cultures.
Chaos (Woodbury, N.Y.) 2003;13(2):515-8.
2002: István Karsai; Gábor Balázsi
Organization of work via a natural substance: regulation of nest construction in social wasps.
Journal of theoretical biology 2002;218(4):549-65.
2001: Gábor Balázsi; Ann H Cornell-Bell; Alexander B Neiman; Frank Moss
Synchronization of hyperexcitable systems with phase-repulsive coupling.
Physical review. E, Statistical, nonlinear, and soft matter physics 2001;64(4 Pt 1):041912.