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Ian Donaldson

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Andrew D Wood; Edwin Chen; Ian Donaldson; Shilpa Hattangadi; Karly A Burke; Mark A Dawson; Diego Miranda-Saavedra; Harvey Lodish; Anthony R Green; Berthold Göttgens
ID1 promotes expansion and survival of primary erythroid cells and is a target of JAK2V617F-STAT5 signaling.
Josette-Renée Landry; Nicolas Bonadies; Sarah Kinston; Kathy Knezevic; Nicola K Wilson; S Helen Oram; Mary Janes; Sandie Piltz; Michelle Hammett; Jacinta Carter; Tina Hamilton; Ian Donaldson; Terence Allen; Jon Frampton; George A Follows; Valerie Kouskoff; Berthold Göttgens
Expression of the leukemia oncogene Lmo2 is controlled by an array of tissue-specific elements dispersed over 100 kb and bound by Tal1/Lmo2, Ets, and Gata factors.
Nicola K Wilson; Diego Miranda-Saavedra; Sarah Kinston; Nicolas Bonadies; Samuel D Foster; Fernando Calero-Nieto; Mark A Dawson; Ian Donaldson; Stephanie Dumon; Jon Frampton; Rekin's Janky; Xiao-Hong Sun; Sarah A Teichmann; Andrew J Bannister; Berthold Göttgens
The transcriptional program controlled by the stem cell leukemia gene Scl/Tal1 during early embryonic hematopoietic development.

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All Publications

2009: Andrew D Wood; Edwin Chen; Ian Donaldson; Shilpa Hattangadi; Karly A Burke; Mark A Dawson; Diego Miranda-Saavedra; Harvey Lodish; Anthony R Green; Berthold Göttgens
ID1 promotes expansion and survival of primary erythroid cells and is a target of JAK2V617F-STAT5 signaling.
Blood 2009;114(9):1820-30.
2009: Josette-Renée Landry; Nicolas Bonadies; Sarah Kinston; Kathy Knezevic; Nicola K Wilson; S Helen Oram; Mary Janes; Sandie Piltz; Michelle Hammett; Jacinta Carter; Tina Hamilton; Ian Donaldson; Terence Allen; Jon Frampton; George A Follows; Valerie Kouskoff; Berthold Göttgens
Expression of the leukemia oncogene Lmo2 is controlled by an array of tissue-specific elements dispersed over 100 kb and bound by Tal1/Lmo2, Ets, and Gata factors.
Blood 2009;113(23):5783-92.
2009: Nicola K Wilson; Diego Miranda-Saavedra; Sarah Kinston; Nicolas Bonadies; Samuel D Foster; Fernando Calero-Nieto; Mark A Dawson; Ian Donaldson; Stephanie Dumon; Jon Frampton; Rekin's Janky; Xiao-Hong Sun; Sarah A Teichmann; Andrew J Bannister; Berthold Göttgens
The transcriptional program controlled by the stem cell leukemia gene Scl/Tal1 during early embryonic hematopoietic development.
Blood 2009;113(22):5456-65.
2008: Aileen M Smith; Maria-Jose Sanchez; George A Follows; Sarah Kinston; Ian Donaldson; Anthony R Green; Berthold Göttgens
A novel mode of enhancer evolution: the Tal1 stem cell enhancer recruited a MIR element to specifically boost its activity.
Genome research 2008;18(9):1422-32.
2007: Shamit Soneji; Sui Huang; Matthew Loose; Ian Donaldson; Roger Patient; Berthold Göttgens; Tariq Enver; Gillian May
Inference, validation, and dynamic modeling of transcription networks in multipotent hematopoietic cells.
Annals of the New York Academy of Sciences 2007;1106():30-40.
2007: Wan Y I Chan; George A Follows; Georges Lacaud; John E Pimanda; Josette-Renee Landry; Sarah Kinston; Kathy Knezevic; Sandie Piltz; Ian Donaldson; Laure Gambardella; Fred Sablitzky; Anthony R Green; Valerie Kouskoff; Berthold Göttgens
The paralogous hematopoietic regulators Lyl1 and Scl are coregulated by Ets and GATA factors, but Lyl1 cannot rescue the early Scl-/- phenotype.
Blood 2007;109(5):1908-16.
2007: John E Pimanda; Ian Donaldson; Marella F T R de Bruijn; Sarah Kinston; Kathy Knezevic; Liz Huckle; Sandie Piltz; Josette-Renee Landry; Anthony R Green; David Tannahill; Berthold Göttgens
The SCL transcriptional network and BMP signaling pathway interact to regulate RUNX1 activity.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(3):840-5.
2007: Ian Donaldson; Berthold Göttgens
CoMoDis: composite motif discovery in mammalian genomes.
Nucleic acids research 2007;35(1):e1.
2006: Diogo S Castro; Dorota Skowronska-Krawczyk; Olivier Armant; Ian Donaldson; Carlos Parras; Charles David Hunt; James A Critchley; Laurent Nguyen; Achim Gossler; Berthold Göttgens; Jean-Marc Matter; François Guillemot
Proneural bHLH and Brn proteins coregulate a neurogenic program through cooperative binding to a conserved DNA motif.
Developmental cell 2006;11(6):831-44.
2006: George A Follows; Pawandeep Dhami; Berthold Göttgens; Alexander W Bruce; Peter J Campbell; Shane C Dillon; Aileen M Smith; Christoph Koch; Ian Donaldson; Mike A Scott; Carl Bruder; Mary E Janes; David Vetrie; Anthony R Green
Identifying gene regulatory elements by genomic microarray mapping of DNaseI hypersensitive sites.
Genome research 2006;16(10):1310-9.
2006: Ian Donaldson; Berthold Göttgens
TFBScluster web server for the identification of mammalian composite regulatory elements.
Nucleic acids research 2006;34(Web Server issue):W524-8.
2006: John E Pimanda; Wan Y I Chan; Ian Donaldson; Mark Bowen; Anthony R Green; Berthold Göttgens
Endoglin expression in the endothelium is regulated by Fli-1, Erg, and Elf-1 acting on the promoter and a -8-kb enhancer.
Blood 2006;107(12):4737-45.
2006: Rory Johnson; Richard J Gamblin; Lezanne Ooi; Alexander W Bruce; Ian Donaldson; David R Westhead; Ian C Wood; Richard M Jackson; Noel J Buckley
Identification of the REST regulon reveals extensive transposable element-mediated binding site duplication.
Nucleic acids research 2006;34(14):3862-77.
2006: Ian Donaldson; Berthold Göttgens
Evolution of candidate transcriptional regulatory motifs since the human-chimpanzee divergence.
Genome biology 2006;7(6):R52.
2006: E Wheeler; E Nancy Miller; Christopher S Peacock; Ian Donaldson; Marie-Anne Shaw; Sarra E Jamieson; Jenefer M Blackwell; Heather J Cordell
Genome-wide scan for loci influencing quantitative immune response traits in the Belém family study: comparison of methods and summary of results.
Annals of human genetics 2006;70(Pt 1):78-97.
2005: Josette-Renee Landry; Sarah Kinston; Kathy Knezevic; Ian Donaldson; Anthony R Green; Berthold Göttgens
Fli1, Elf1, and Ets1 regulate the proximal promoter of the LMO2 gene in endothelial cells.
Blood 2005;106(8):2680-7.
2005: Ian Donaldson; Michael Chapman; Berthold Göttgens
TFBScluster: a resource for the characterization of transcriptional regulatory networks.
Bioinformatics (Oxford, England) 2005;21(13):3058-9.
2005: Catherine A Lawson; Ian Donaldson; S J Bowman; Jahan Shefta; Ann W Morgan; A K S Gough; John D Isaacs; Bridget Griffiths; Paul Emery; Colin Pease; Arthur W Boylston
Analysis of the insertion/deletion related polymorphism within T cell antigen receptor beta variable genes in primary Sjögren's syndrome.
Annals of the rheumatic diseases 2005;64(3):468-70.
2005: Ian Donaldson; Michael Chapman; Sarah Kinston; Josette-Renee Landry; Kathy Knezevic; Sandie Piltz; Noel Buckley; Anthony R Green; Berthold Göttgens
Genome-wide identification of cis-regulatory sequences controlling blood and endothelial development.
Human molecular genetics 2005;14(5):595-601.
2004: Alexander W Bruce; Ian Donaldson; Ian C Wood; Sally A Yerbury; Michael I Sadowski; Michael Chapman; Berthold Göttgens; Noel J Buckley
Genome-wide analysis of repressor element 1 silencing transcription factor/neuron-restrictive silencing factor (REST/NRSF) target genes.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(28):10458-63.
2004: Michael A Chapman; Ian Donaldson; James Gilbert; Darren Grafham; Jane Rogers; Anthony R Green; Berthold Göttgens
Analysis of multiple genomic sequence alignments: a web resource, online tools, and lessons learned from analysis of mammalian SCL loci.
Genome research 2004;14(2):313-8.
2002: Ian Donaldson; Jahan Shefta; Adrian V S Hill; Arthur W Boylston
Malaria is not responsible for the selection of TCR beta-subunit variable gene haplotypes in The Gambia.
Immunogenetics 2002;53(10-11):894-9.
2002: Ian Donaldson; Jahan Shefta; Catherine A Lawson; James R Bushnell; Ann W Morgan; John D Isaacs; Danielle Carpenter; Marie-Anne Shaw; Ingegerd Rooth; Rupert J Quinnell; Alimuddin M Zumla; William R Ollier; Chifumbe Z Chintu; Gabriel P Muyinda; Adrian S Hill; Arthur W Boylston
Unique TCR beta-subunit variable gene haplotypes in Africans.
Immunogenetics 2002;53(10-11):884-93.
2001: Marie-Anne Shaw; Ian Donaldson; ANDREW COLLINS; Christopher S Peacock; Z Lins-Lainson; Jeffrey J Shaw; F Ramos; Fernando T Silveira; Jenefer M Blackwell
Association and linkage of leprosy phenotypes with HLA class II and tumour necrosis factor genes.
Genes and immunity 2001;2(4):196-204.