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Gregory Cooper

Research Profile

Genes & Molecular Sequences

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TOP 3
Gregory Cooper; David L Goode; Sarah B Ng; Arend Sidow; Michael J Bamshad; Jay Shendure; Deborah A Nickerson
Single-nucleotide evolutionary constraint scores highlight disease-causing mutations.
Santhosh Girirajan; Jill A Rosenfeld; Gregory Cooper; Francesca Antonacci; Priscillia Siswara; Andy Itsara; Laura Vives; Tom Walsh; Shane E McCarthy; Carl Baker; Heather C Mefford; Jeffrey M Kidd; Sharon R Browning; Brian L Browning; Diane E Dickel; Deborah L Levy; Blake C Ballif; Kathryn Platky; Darren M Farber; Gordon C Gowans; Jessica J Wetherbee; Alexander Asamoah; David D Weaver; Paul R Mark; Jennifer Dickerson; Bhuwan P Garg; Sara A Ellingwood; Rosemarie Smith; Valerie C Banks; Wendy Smith; Marie T McDonald; Joe J Hoo; Beatrice N French; Cindy Hudson; John P Johnson; Jillian R Ozmore; John B Moeschler; Urvashi Surti; Luis F Escobar; Dima El-Khechen; Jerome L Gorski; Jennifer Kussmann; Bonnie Salbert; Yves Lacassie; Alisha Biser; Donna M McDonald-McGinn; Elaine H Zackai; Matthew A Deardorff; Tamim H Shaikh; Eric Haan; Kathryn L Friend; Marco Fichera; Corrado Romano; Jozef Gécz; Lynn E DeLisi; Jonathan Sebat; Mary-Claire King; Lisa Shaffer; Evan E Eichler
A recurrent 16p12.1 microdeletion supports a two-hit model for severe developmental delay.
David L Goode; Gregory Cooper; Jeremy Schmutz; Mark Dickson; Eidelyn Gonzales; Ming Tsai; Kalpana Karra; Eugene Davydov; Serafim Batzoglou; Richard Myers; Arend Sidow
Evolutionary constraint facilitates interpretation of genetic variation in resequenced human genomes.

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All Publications

2010: Gregory Cooper; David L Goode; Sarah B Ng; Arend Sidow; Michael J Bamshad; Jay Shendure; Deborah A Nickerson
Single-nucleotide evolutionary constraint scores highlight disease-causing mutations.
Nature methods 2010;7(4):250-1.
2010: Santhosh Girirajan; Jill A Rosenfeld; Gregory Cooper; Francesca Antonacci; Priscillia Siswara; Andy Itsara; Laura Vives; Tom Walsh; Shane E McCarthy; Carl Baker; Heather C Mefford; Jeffrey M Kidd; Sharon R Browning; Brian L Browning; Diane E Dickel; Deborah L Levy; Blake C Ballif; Kathryn Platky; Darren M Farber; Gordon C Gowans; Jessica J Wetherbee; Alexander Asamoah; David D Weaver; Paul R Mark; Jennifer Dickerson; Bhuwan P Garg; Sara A Ellingwood; Rosemarie Smith; Valerie C Banks; Wendy Smith; Marie T McDonald; Joe J Hoo; Beatrice N French; Cindy Hudson; John P Johnson; Jillian R Ozmore; John B Moeschler; Urvashi Surti; Luis F Escobar; Dima El-Khechen; Jerome L Gorski; Jennifer Kussmann; Bonnie Salbert; Yves Lacassie; Alisha Biser; Donna M McDonald-McGinn; Elaine H Zackai; Matthew A Deardorff; Tamim H Shaikh; Eric Haan; Kathryn L Friend; Marco Fichera; Corrado Romano; Jozef Gécz; Lynn E DeLisi; Jonathan Sebat; Mary-Claire King; Lisa Shaffer; Evan E Eichler
A recurrent 16p12.1 microdeletion supports a two-hit model for severe developmental delay.
Nature genetics 2010;42(3):203-9.
2010: David L Goode; Gregory Cooper; Jeremy Schmutz; Mark Dickson; Eidelyn Gonzales; Ming Tsai; Kalpana Karra; Eugene Davydov; Serafim Batzoglou; Richard Myers; Arend Sidow
Evolutionary constraint facilitates interpretation of genetic variation in resequenced human genomes.
Genome research 2010;20(3):301-10.
2010: Troy Zerr; Gregory Cooper; Evan E Eichler; Deborah A Nickerson
Targeted interrogation of copy number variation using SCIMMkit.
Bioinformatics (Oxford, England) 2010;26(1):120-2.
2009: Heather C Mefford; Gregory Cooper; Troy Zerr; Joshua D Smith; Carl Baker; Neil Shafer; Erik C Thorland; Cindy Skinner; Charles E Schwartz; Deborah A Nickerson; Evan E Eichler
A method for rapid, targeted CNV genotyping identifies rare variants associated with neurocognitive disease.
Genome research 2009;19(9):1579-85.
2009: F D Hannes; A J Sharp; H C Mefford; T de Ravel; C A Ruivenkamp; M H Breuning; Jean-Pierre Fryns; koenraad devriendt; G Van Buggenhout; A Vogels; H Stewart; Raoul Hennekam; Gregory Cooper; R Regan; S J L Knight; Evan E Eichler; Joris R Vermeesch
Recurrent reciprocal deletions and duplications of 16p13.11: the deletion is a risk factor for MR/MCA while the duplication may be a rare benign variant.
Journal of medical genetics 2009;46(4):223-32.
2009: Andy Itsara; Gregory Cooper; Carl Baker; Santhosh Girirajan; Jun Li; Devin Absher; Ronald M Krauss; Richard Myers; Paul M Ridker; Daniel I Chasman; Heather C Mefford; Phyllis Ying; Deborah A Nickerson; Evan E Eichler
Population analysis of large copy number variants and hotspots of human genetic disease.
American journal of human genetics 2009;84(2):148-61.
2008: Gregory Cooper; Troy Zerr; Jeffrey M Kidd; Evan E Eichler; Deborah A Nickerson
Systematic assessment of copy number variant detection via genome-wide SNP genotyping.
Nature genetics 2008;40(10):1199-203.
2008: Gregory Cooper; Julie A Johnson; Taimour Y Langaee; Hua Feng; Ian B Stanaway; Ute I Schwarz; Marylyn Ritchie; C Michael Stein; Dan Mark Roden; joshua smith; David L Veenstra; Allan E Rettie; Mark J Rieder
A genome-wide scan for common genetic variants with a large influence on warfarin maintenance dose.
Blood 2008;112(4):1022-7.
2008: Jeffrey M Kidd; Gregory Cooper; William F Donahue; Hillary S Hayden; Nick Sampas; Tina Graves; Nancy Hansen; Brian Teague; Can Alkan; Francesca Antonacci; Eric Haugen; Troy Zerr; N Alice Yamada; Peter Tsang; Tera L Newman; Eray Tüzün; Ze Cheng; Heather M Ebling; Nadeem Tusneem; Robert David; Will Gillett; Karen A Phelps; Molly Weaver; David Saranga; Adrianne Brand; Wei Tao; Erik Gustafson; Kevin McKernan; Lin Chen; Maika Malig; Joshua D Smith; Joshua M Korn; Steven A McCarroll; David A Altshuler; Daniel A Peiffer; Michael Dorschner; John Stamatoyannopoulos; David Schwartz; Deborah A Nickerson; James C Mullikin; Richard K Wilson; Laurakay Bruhn; Maynard V Olson; Rajinder Kaul; joshua smith; Evan E Eichler
Mapping and sequencing of structural variation from eight human genomes.
Nature 2008;453(7191):56-64.
2008: Alexander P Reiner; Mathew Barber; Yongtao Guan; Paul M Ridker; Leslie A Lange; Daniel I Chasman; Jeremy Walston; Gregory Cooper; Nancy S Jenny; Mark J Rieder; J Peter Durda; joshua smith; John Novembre; Russell P Tracy; Jerome I Rotter; Matthew Stephens; Deborah A Nickerson; Ronald M Krauss
Polymorphisms of the HNF1A gene encoding hepatocyte nuclear factor-1 alpha are associated with C-reactive protein.
American journal of human genetics 2008;82(5):1193-201.
2008: Tom Walsh; Jon M McClellan; Shane E McCarthy; Anjené M Addington; Sarah B Pierce; Gregory Cooper; Alex S Nord; Mary Kusenda; Dheeraj Malhotra; Abhishek Bhandari; Sunday M Stray; Caitlin F Rippey; Patricia Roccanova; Vlad Makarov; B Lakshmi; Robert L Findling; Linmarie Sikich; Thomas Stromberg; Barry Merriman; Nitin Gogtay; Philip Butler; Kristen Eckstrand; Laila Noory; Peter Gochman; Robert Long; Zugen Chen; Sean Davis; Carl Baker; Evan E Eichler; Paul S Meltzer; Stanley F Nelson; Andrew Singleton; Ming K Lee; Judy Rapoport; Mary-Claire King; Jonathan Sebat
Rare structural variants disrupt multiple genes in neurodevelopmental pathways in schizophrenia.
Science (New York, N.Y.) 2008;320(5875):539-43.
2008: andrew sharp; Heather C Mefford; Kelly Li; Carl Baker; Cindy Skinner; Roger E Stevenson; Richard J Schroer; Francesca Novara; Manuela De Gregori; Roberto Ciccone; Adam Broomer; Iris Casuga; Yu Wang; Chunlin Xiao; Catalin Barbacioru; Giorgio Gimelli; Bernardo Dalla Bernardina; Claudia Torniero; Roberto Giorda; Regina Regan; Victoria Murday; Sahar Mansour; Marco Fichera; Lucia Castiglia; Pinella Failla; ventura Mario; Zhaoshi Jiang; Gregory Cooper; Samantha J L Knight; Corrado Romano; Orsetta Zuffardi; Caifu Chen; Charles E Schwartz; Evan E Eichler
A recurrent 15q13.3 microdeletion syndrome associated with mental retardation and seizures.
Nature genetics 2008;40(3):322-8.
2008: Gregory Cooper; Christopher D Brown
Qualifying the relationship between sequence conservation and molecular function.
Genome research 2008;18(2):201-5.
2008: Sekar Kathiresan; Olle Melander; Candace Guiducci; Aarti Surti; Noël P Burtt; Mark J Rieder; Gregory Cooper; Charlotta Roos; Benjamin F Voight; Aki S Havulinna; Björn Wahlstrand; Thomas Hedner; Dolores Corella; E Shyong Tai; Jose Ordovas; Göran Berglund; Erkki Vartiainen; Pekka Jousilahti; Bo Hedblad; Marja-Riitta Taskinen; Christopher Newton-Cheh; Veikko Salomaa; Leena Peltonen; Leif Groop; David Altshuler; Marju Orho-Melander
Six new loci associated with blood low-density lipoprotein cholesterol, high-density lipoprotein cholesterol or triglycerides in humans.
Nature genetics 2008;40(2):189-97.
2008: Donald Bovee; Yang Zhou; Eric Haugen; Zaining Wu; Hillary S Hayden; Will Gillett; Eray Tuzun; Gregory Cooper; Nick Sampas; Karen Phelps; Ruth Levy; V Anne Morrison; James Sprague; Donald Jewett; Danielle Buckley; Sandhya Subramaniam; Jean Chang; Douglas R Smith; Maynard V Olson; Evan E Eichler; Rajinder Kaul
Closing gaps in the human genome with fosmid resources generated from multiple individuals.
Nature genetics 2008;40(1):96-101.
2007: Heather C Mefford; Séverine Clauin; andrew sharp; Rikke Steensbjerre Møller; Reinhard Ullmann; Raj Kapur; Daniel Pinkel; Gregory Cooper; ventura Mario; Hans-Hilger Ropers; Niels Tommerup; Evan E Eichler; Christine Bellanne-Chantelot
Recurrent reciprocal genomic rearrangements of 17q12 are associated with renal disease, diabetes, and epilepsy.
American journal of human genetics 2007;81(5):1057-69.
2007: Gregory Cooper; Deborah A Nickerson; Evan E Eichler
Mutational and selective effects on copy-number variants in the human genome.
Nature genetics 2007;39(7 Suppl):S22-9.
2007: Ewan Birney; John A Stamatoyannopoulos; Anindya Dutta; Roderic Guigó; Thomas Gingeras; Elliott H Margulies; Zhiping Weng; Michael Snyder; Emmanouil T Dermitzakis; Robert E Thurman; Michael S Kuehn; Christopher M Taylor; Shane Neph; Christoph M Koch; Saurabh Asthana; Ankit Malhotra; Ivan Adzhubei; Jason A Greenbaum; Robert M Andrews; Paul Flicek; Patrick J Boyle; Hua Cao; Nigel P Carter; Gayle K Clelland; Sean Davis; Nathan Day; Pawandeep Dhami; Shane C Dillon; Michael O Dorschner; Heike Fiegler; Paul G Giresi; Jeff Goldy; Michael Hawrylycz; Andrew Haydock; Richard Humbert; Keith D James; Brett E Johnson; Ericka M Johnson; Tristan T Frum; Elizabeth R Rosenzweig; Neerja Karnani; Kirsten Lee; Gregory C Lefebvre; Patrick A Navas; Fidencio Neri; Stephen C J Parker; Peter J Sabo; Richard Sandstrom; Anthony Shafer; David Vetrie; Molly Weaver; Sarah Wilcox; Man Yu; Francis S Collins; Job Dekker; Jason Dillon Lieb; Thomas D Tullius; Gregory E Crawford; Shamil Sunyaev; William S Noble; Ian Dunham; France Denoeud; Alexandre Reymond; Philipp Kapranov; Joel Rozowsky; Deyou Zheng; Robert Castelo; Adam Frankish; Jennifer Harrow; Srinka Ghosh; Albin Sandelin; Ivo L Hofacker; Robert Baertsch; Damian Keefe; Sujit Dike; Jill Cheng; Heather A. Hirsch; Edward A Sekinger; Julien Lagarde; Josep F Abril; Atif Shahab; Christoph Flamm; Claudia Fried; Jorg Hackermuller; Jana Hertel; Manja Lindemeyer; Kristin Missal; Andrea Tanzer; Stefan Washietl; Jan Korbel; Olof Emanuelsson; Jakob S Pedersen; Nancy Holroyd; Ruth Taylor; David Swarbreck; Nicholas Matthews; Mark C Dickson; Daryl J Thomas; Matthew T Weirauch; James Gilbert; Jorg Drenkow; Ian Bell; XiaoDong Zhao; K G Srinivasan; Wing-Kin Sung; Hong Sain Ooi; Kuo Ping Chiu; Sylvain Foissac; Tyler Alioto; Michael Brent; Lior Pachter; Michael L Tress; Alfonso Valencia; Siew Woh Choo; Chiou Yu Choo; Catherine Ucla; Caroline Manzano; Carine Wyss; Evelyn Cheung; Taane G Clark; James B Brown; Madhavan Ganesh; Sandeep Patel; Hari Tammana; Jacqueline Chrast; Charlotte N Henrichsen; Chikatoshi Kai; Jun Kawai; Ugrappa Nagalakshmi; Jiaqian Wu; Zheng Lian; Jin Lian; Peter Newburger; Xueqing Zhang; Peter Bickel; John S Mattick; piero carninci; Yoshihide Hayashizaki; Sherman Weissman; Tim Hubbard; Richard Myers; Jane Rogers; Peter F Stadler; Todd M Lowe; Chia-Lin Wei; Yijun Ruan; Kevin Struhl; Mark Gerstein; Stylianos Antonarakis; Yutao Fu; Eric Green; Ulaş Karaöz; Adam Siepel; James TAYLOR; Laura A Liefer; Kris A Wetterstrand; Peter J Good; Elise A Feingold; Mark S Guyer; Gregory Cooper; George Asimenos; Colin N Dewey; Minmei Hou; Sergey Nikolaev; Juan I Montoya-Burgos; Ari Löytynoja; Simon Whelan; Fabio Pardi; Tim Massingham; Haiyan Huang; Nancy R Zhang; Ian Holmes; James C Mullikin; Abel Ureta-Vidal; Benedict Paten; Michael Seringhaus; Deanna Church; Kate Rosenbloom; W James Kent; Eric A Stone; Serafim Batzoglou; Nick Goldman; Ross C Hardison; David Haussler; Webb Miller; Arend Sidow; Nathan D Trinklein; Zhengdong D Zhang; Leah Barrera; Rhona Stuart; David C King; Adam Ameur; Stefan Enroth; Mark C Bieda; Jonghwan Kim; Akshay A Bhinge; Nan Jiang; Jun Liu; Fei Yao; Vinsensius B Vega; Charlie W H Lee; Patrick Ng; Atif Shahab; Annie Yang; Zarmik Moqtaderi; Zhou Zhu; Xiaoqin Xu; Sharon Squazzo; Matthew J Oberley; David Inman; Michael A Singer; Richmond Todd; Kyle J Munn; Alvaro Rada-Iglesias; Ola Wallerman; Jan Komorowski; Joanna C Fowler; Phillippe Couttet; Alexander W Bruce; Oliver M Dovey; Peter D Ellis; Cordelia F Langford; David A Nix; Ghia Euskirchen; Stephen Hartman; Alexander E Urban; Peter Kraus; Sara Van Calcar; Nate Heintzman; Tae Hoon Kim; Kun Wang; Chunxu Qu; Gary Hon; Rosa Luna; Christopher K Glass; M Geoff Rosenfeld; Shelley Force Aldred; Sara J Cooper; Anason Halees; Jane M Lin; Hennady P Shulha; Xiaoling Zhang; Mousheng Xu; Jaafar N S Haidar; Yong Yu; Yijun Ruan; Vishwanath R Iyer; Roland D Green; Claes Wadelius; Peggy J Farnham; Bing Ren; Rachel A Harte; Angie S Hinrichs; Heather Trumbower; Hiram Clawson; Jennifer Hillman-Jackson; Ann S Zweig; Kayla Smith; Archana Thakkapallayil; Galt Barber; Robert M Kuhn; Donna Karolchik; Lluis Armengol; Christine P Bird; Paul I W de Bakker; Andrew D Kern; Nuria Lopez-Bigas; Joel D Martin; Barbara E Stranger; Abigail Woodroffe; Eugene Davydov; Antigone Dimas; Eduardo Eyras; Ingileif B Hallgrímsdóttir; Julian Huppert; Michael C Zody; Goncalo Abecasis; Xavier Estivill; Gerard G Bouffard; Xiaobin Guan; Nancy F Hansen; Jacquelyn R Idol; Valerie V B Maduro; Baishali Maskeri; Jennifer C McDowell; Morgan Park; Pamela J Thomas; Alice C Young; Robert W Blakesley; Donna M Muzny; Erica Sodergren; David A Wheeler; Kim C Worley; Huaiyang Jiang; George Weinstock; Richard A Gibbs; Tina Graves; Robert Fulton; Elaine R Mardis; Richard K Wilson; Michele Clamp; James Cuff; Sante Gnerre; David B Jaffe; Jean L Chang; Kerstin Lindblad-Toh; Eric S Lander; Maxim Koriabine; Mikhail Nefedov; Kazutoyo Osoegawa; Yuko Yoshinaga; Baoli Zhu; Pieter J de Jong
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.
Nature 2007;447(7146):799-816.
2007: Elliott H Margulies; Gregory Cooper; George Asimenos; Daryl J Thomas; Colin N Dewey; Adam Siepel; Ewan Birney; Damian Keefe; Ariel S Schwartz; Minmei Hou; James TAYLOR; Sergey Nikolaev; Juan I Montoya-Burgos; Ari Löytynoja; Simon Whelan; Fabio Pardi; Tim Massingham; James B Brown; Peter Bickel; Ian Holmes; James C Mullikin; Abel Ureta-Vidal; Benedict Paten; Eric A Stone; Kate R Rosenbloom; W James Kent; Gerard G Bouffard; Xiaobin Guan; Nancy F Hansen; Jacquelyn R Idol; Valerie V B Maduro; Baishali Maskeri; Jennifer C McDowell; Morgan Park; Pamela J Thomas; Alice C Young; Robert W Blakesley; Donna M Muzny; Erica Sodergren; David A Wheeler; Kim C Worley; Huaiyang Jiang; George Weinstock; Richard A Gibbs; Tina Graves; Robert Fulton; Elaine R Mardis; Richard K Wilson; Michele Clamp; James Cuff; Sante Gnerre; David B Jaffe; Jean L Chang; Kerstin Lindblad-Toh; Eric S Lander; Angie Hinrichs; Heather Trumbower; Hiram Clawson; Ann Zweig; Robert M Kuhn; Galt Barber; Rachel Harte; Donna Karolchik; Matthew A Field; Richard A Moore; Carrie A Matthewson; Jacqueline E Schein; Marco A Marra; Stylianos Antonarakis; Serafim Batzoglou; Nick Goldman; Ross Hardison; David Haussler; Webb Miller; Lior Pachter; Eric Green; Arend Sidow
Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome.
Genome research 2007;17(6):760-74.
2007: Taane G Clark; Toby Andrew; Gregory Cooper; Elliott H Margulies; James C Mullikin; David J Balding
Functional constraint and small insertions and deletions in the ENCODE regions of the human genome.
Genome biology 2007;8(9):R180.
2007: Christopher B Kaelin; Gregory Cooper; Arend Sidow; Gregory S Barsh
Mammalian comparative sequence analysis of the Agrp locus.
PloS one 2007;2(8):e702.
2005: Gregory Cooper; Eric A Stone; George Asimenos; Eric Green; Serafim Batzoglou; Arend Sidow
Distribution and intensity of constraint in mammalian genomic sequence.
Genome research 2005;15(7):901-13.
2005: Eric A Stone; Gregory Cooper; Arend Sidow
Trade-offs in detecting evolutionarily constrained sequence by comparative genomics.
Annual review of genomics and human genetics 2005;6():143-64.
2004: Gregory Cooper; Senthil A G Singaravelu; Arend Sidow
ABC: software for interactive browsing of genomic multiple sequence alignment data.
BMC bioinformatics 2004;5():192.
2004: Andrea H Okun; Gregory Cooper; A John Bailer; James F Bena; Leslie T Stayner
Trends in occupational lead exposure since the 1978 OSHA lead standard.
American journal of industrial medicine 2004;45(6):558-72.
2004: Michael Brudno; Alexander Poliakov; Asaf Salamov; Gregory Cooper; Arend Sidow; Edward M Rubin; Victor Solovyev; Serafim Batzoglou; Inna Dubchak
Automated whole-genome multiple alignment of rat, mouse, and human.
Genome research 2004;14(4):685-92.
2004: Gregory Cooper; Michael Brudno; Eric A Stone; Inna Dubchak; Serafim Batzoglou; Arend Sidow
Characterization of evolutionary rates and constraints in three Mammalian genomes.
Genome research 2004;14(4):539-48.
2004: Richard A Gibbs; George M Weinstock; Michael L Metzker; Donna M Muzny; Erica J Sodergren; Steven Scherer; Graham Scott; David Steffen; Kim C Worley; Paula E Burch; Geoffrey Okwuonu; Sandra Hines; Lora Lewis; Christine DeRamo; Oliver Delgado; Shannon Dugan-Rocha; George Miner; Margaret Morgan; Alicia Hawes; Rachel Gill; Robert A Holt; Mark D Adams; Peter G Amanatides; Holly Baden-Tillson; Mary Barnstead; Soo Chin; Cheryl A Evans; Steve Ferriera; Carl Fosler; Anna Glodek; Zhiping Gu; Don Jennings; Cheryl L Kraft; Trixie Nguyen; Cynthia M Pfannkoch; Cynthia Sitter; Granger G Sutton; J Craig Venter; Trevor Woodage; Douglas Smith; Hong-Mei Lee; Erik Gustafson; Patrick Cahill; Arnold Kana; Lynn Doucette-Stamm; Keith Weinstock; Kim Fechtel; Robert B Weiss; Diane M Dunn; Eric Green; Robert W Blakesley; Gerard G Bouffard; Pieter J De Jong; Kazutoyo Osoegawa; Baoli Zhu; Marco Marra; Jacqueline Schein; Ian Bosdet; Chris Fjell; Steven Jones; Martin Krzywinski; Carrie Mathewson; Asim Siddiqui; Natasja Wye; John McPherson; Shaying Zhao; Claire M Fraser-Liggett; Jyoti Shetty; Sofiya Shatsman; Keita Geer; Yixin Chen; Sofyia Abramzon; William C Nierman; Paul H Havlak; Rui Chen; K James Durbin; Amy Egan; Yanru Ren; Xing-Zhi Song; Bingshan Li; Yue Liu; Xiang Qin; Simon Cawley; Kim C Worley; A J Cooney; Lisa M D'Souza; Kirt Martin; Jia Qian Wu; Manuel Gonzalez-Garay; Andrew R Jackson; Kenneth J Kalafus; Michael P McLeod; Aleksandar Milosavljevic; Davinder Virk; Andrei Volkov; David A Wheeler; Zhengdong D Zhang; Jeffrey A Bailey; Evan E Eichler; Eray Tuzun; Ewan Birney; Emmanuel Mongin; Abel Ureta-Vidal; Cara Woodwark; Evgeny Zdobnov; Peer Bork; Mikita Suyama; David Torrents; Marina Alexandersson; Barbara J Trask; Janet M Young; Hui Huang; Huajun Wang; Heming Xing; Sue Daniels; Darryl Gietzen; Jeanette Schmidt; Kristian Stevens; Ursula Vitt; Jim Wingrove; Francisco Camara; M Mar Albà; Josep F Abril; Roderic Guigo; Arian Smit; Inna Dubchak; Edward M Rubin; Olivier Couronne; Alexander Poliakov; Norbert Hübner; Detlev Ganten; Claudia Goesele; Oliver Hummel; Thomas Kreitler; Young-Ae Lee; Jan Monti; Herbert Schulz; Heike Zimdahl; Heinz Himmelbauer; Hans Lehrach; Howard J Jacob; Susan Bromberg; Jo Gullings-Handley; Michael I Jensen-Seaman; Anne E Kwitek; Jozef Lazar; Dean Pasko; Peter Tonellato; Simon Twigger; Chris P Ponting; Jose M Duarte; Stephen Rice; Leo Goodstadt; Scott A Beatson; Richard Emes; Eitan E Winter; Caleb Webber; Petra Brandt; Gerald Nyakatura; Margaret Adetobi; Francesca Chiaromonte; Laura Elnitski; Pallavi Eswara; Ross C Hardison; Minmei Hou; Diana Kolbe; Kateryna Makova; Webb Miller; Anton Nekrutenko; Cathy Riemer; Scott Schwartz; James TAYLOR; Shan Yang; Yi Zhang; Klaus Lindpaintner; T Dan Andrews; Mario Caccamo; Michele Clamp; Laura Clarke; Valerie Curwen; Richard Durbin; Eduardo Eyras; Stephen M Searle; Gregory Cooper; Serafim Batzoglou; Michael Brudno; Arend Sidow; Eric A Stone; J Craig Venter; Bret Payseur; Guillaume Bourque; Carlos López-Otín; Xose S Puente; Kushal Chakrabarti; Sourav Chatterji; Colin Dewey; Lior Pachter; Nicolas Bray; Von Bing Yap; Anat Caspi; Glenn Tesler; Pavel A Pevzner; David Haussler; Krishna M Roskin; Robert Baertsch; Hiram Clawson; Terrence S Furey; Angie S Hinrichs; Donna Karolchik; W James Kent; Kate R Rosenbloom; Heather Trumbower; Matt Weirauch; David N Cooper; Peter D Stenson; Bin Ma; Michael Brent; Manimozhiyan Arumugam; David Shteynberg; Richard R Copley; Martin Taylor; Harold Riethman; Uma Mudunuri; Jane Peterson; Mark Guyer; Adam Felsenfeld; Susan Old; Stephen Mockrin; Francis S Collins
Genome sequence of the Brown Norway rat yields insights into mammalian evolution.
Nature 2004;428(6982):493-521.
2003: Gregory Cooper; Arend Sidow
Genomic regulatory regions: insights from comparative sequence analysis.
Current opinion in genetics & development 2003;13(6):604-10.
2003: Gregory Cooper; Michael Brudno; Eric Green; Serafim Batzoglou; Arend Sidow
Quantitative estimates of sequence divergence for comparative analyses of mammalian genomes.
Genome research 2003;13(5):813-20.
2003: Michael Brudno; Chuong B Do; Gregory Cooper; Michael F Kim; Eugene Davydov; Eric Green; Arend Sidow; Serafim Batzoglou
LAGAN and Multi-LAGAN: efficient tools for large-scale multiple alignment of genomic DNA.
Genome research 2003;13(4):721-31.