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Lutz Krause

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Sebastian Jaenicke; Christina Ander; Thomas Bekel; Regina Bisdorf; M Dröge; Karl-Heinz Gartemann; Sebastian Jünemann; Olaf Kaiser; Lutz Krause; Felix Tille; Martha Zakrzewski; Alfred Pühler; Andreas Schlüter; Alexander Goesmann
Comparative and joint analysis of two metagenomic datasets from a biogas fermenter obtained by 454-pyrosequencing.
Martin Kussmann; Lutz Krause; Winfried Siffert
Nutrigenomics: where are we with genetic and epigenetic markers for disposition and susceptibility?
Magdalena Kröber; Thomas Bekel; Naryttza N Diaz; Alexander Goesmann; Sebastian Jaenicke; Lutz Krause; Dimitri Miller; Kai J Runte; Prisca Viehöver; Alfred Pühler; Andreas Schlüter
Phylogenetic characterization of a biogas plant microbial community integrating clone library 16S-rDNA sequences and metagenome sequence data obtained by 454-pyrosequencing.

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All Publications

2011: Sebastian Jaenicke; Christina Ander; Thomas Bekel; Regina Bisdorf; M Dröge; Karl-Heinz Gartemann; Sebastian Jünemann; Olaf Kaiser; Lutz Krause; Felix Tille; Martha Zakrzewski; Alfred Pühler; Andreas Schlüter; Alexander Goesmann
Comparative and joint analysis of two metagenomic datasets from a biogas fermenter obtained by 454-pyrosequencing.
PloS one 2011;6(1):e14519.
2010: Martin Kussmann; Lutz Krause; Winfried Siffert
Nutrigenomics: where are we with genetic and epigenetic markers for disposition and susceptibility?
Nutrition reviews 2010;68 Suppl 1():S38-47.
2009: Magdalena Kröber; Thomas Bekel; Naryttza N Diaz; Alexander Goesmann; Sebastian Jaenicke; Lutz Krause; Dimitri Miller; Kai J Runte; Prisca Viehöver; Alfred Pühler; Andreas Schlüter
Phylogenetic characterization of a biogas plant microbial community integrating clone library 16S-rDNA sequences and metagenome sequence data obtained by 454-pyrosequencing.
Journal of biotechnology 2009;142(1):38-49.
2009: Axel W Strittmatter; Heiko Liesegang; Ralf Rabus; Iwona Decker; Judith Amann; Sönke Andres; Anke Henne; W. Florian Fricke; Rosa Martinez-Arias; Daniela Bartels; Alexander Goesmann; Lutz Krause; Alfred Pühler; Hans-Peter Klenk; Michael Richter; Margarete Schüler; Frank Oliver Glöckner; Anke Meyerdierks; Gerhard Gottschalk; Rudolf Amann
Genome sequence of Desulfobacterium autotrophicum HRM2, a marine sulfate reducer oxidizing organic carbon completely to carbon dioxide.
Environmental microbiology 2009;11(5):1038-55.
2009: Naryttza N Diaz; Lutz Krause; Alexander Goesmann; Karsten Niehaus; Tim W Nattkemper
TACOA: taxonomic classification of environmental genomic fragments using a kernelized nearest neighbor approach.
BMC bioinformatics 2009;10():56.
2008: Lutz Krause; Naryttza N Diaz; Robert A Edwards; Karl-Heinz Gartemann; Holger Krömeke; Heiko Neuweger; Alfred Pühler; Kai J Runte; Andreas Schlüter; Jens Stoye; Rafael Szczepanowski; Andreas Tauch; Alexander Goesmann
Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactor.
Journal of biotechnology 2008;136(1-2):91-101.
2008: Andreas Schlüter; Lutz Krause; Rafael Szczepanowski; Alexander Goesmann; Alfred Pühler
Genetic diversity and composition of a plasmid metagenome from a wastewater treatment plant.
Journal of biotechnology 2008;136(1-2):65-76.
2008: Andreas Schlüter; Thomas Bekel; Naryttza N Diaz; Michael Dondrup; Rudolf Eichenlaub; Karl-Heinz Gartemann; Irene Krahn; Lutz Krause; Holger Krömeke; Olaf Kruse; Jan H Mussgnug; Heiko Neuweger; Karsten Niehaus; Alfred Pühler; Kai J Runte; Rafael Szczepanowski; Andreas Tauch; Alexandra Tilker; Prisca Viehöver; Alexander Goesmann
The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology.
Journal of biotechnology 2008;136(1-2):77-90.
2008: Rafael Szczepanowski; Thomas Bekel; Alexander Goesmann; Lutz Krause; Holger Krömeke; Olaf Kaiser; Wolfgang Eichler; Alfred Pühler; Andreas Schlüter
Insight into the plasmid metagenome of wastewater treatment plant bacteria showing reduced susceptibility to antimicrobial drugs analysed by the 454-pyrosequencing technology.
Journal of biotechnology 2008;136(1-2):54-64.
2008: Lutz Krause; Naryttza N Diaz; Alexander Goesmann; Scott Kelley; Tim W Nattkemper; Forest Rohwer; Robert A Edwards; Jens Stoye
Phylogenetic classification of short environmental DNA fragments.
Nucleic acids research 2008;36(7):2230-9.
2008: Frank-Jörg Vorhölter; Susanne Schneiker; Alexander Goesmann; Lutz Krause; Thomas Bekel; Olaf Kaiser; Burkhard Linke; Thomas Patschkowski; Christian Rückert; Joachim Schmid; Vishaldeep Kaur Sidhu; Volker Sieber; Andreas Tauch; Steven Alexander Watt; Bernd Weisshaar; Anke Becker; Karsten Niehaus; Alfred Pühler
The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis.
Journal of biotechnology 2008;134(1-2):33-45.
2008: Karl-Heinz Gartemann; Birte Abt; Thomas Bekel; Annette Burger; Jutta Engemann; Monika Flügel; Lars Gaigalat; Alexander Goesmann; Ines Gräfen; Jörn Kalinowski; Olaf Kaup; Oliver Kirchner; Lutz Krause; Burkhard Linke; Alice C McHardy; Folker Meyer; Sandra Pohle; Christian Rückert; Susanne Schneiker; Eva-Maria Zellermann; Alfred Pühler; Rudolf Eichenlaub; Olaf Kaiser; Daniela Bartels
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity.
Journal of bacteriology 2008;190(6):2138-49.
2008: Elizabeth A Dinsdale; Olga Pantos; Steven Smriga; Robert A Edwards; Florent Angly; Linda Wegley; Mark Hatay; Dana Hall; Elysa Brown; Matthew Haynes; Lutz Krause; Enric Sala; Stuart A Sandin; Rebecca Vega Thurber; Bette L Willis; Farooq Azam; Nancy Knowlton; Forest Rohwer
Microbial ecology of four coral atolls in the Northern Line Islands.
PloS one 2008;3(2):e1584.
2007: Christine Meisinger-Henschel; Michaela Schmidt; Susanne Lukassen; Burkhard Linke; Lutz Krause; Sebastian Konietzny; Alexander Goesmann; Paul Howley; Paul Chaplin; Mark Suter; Jürgen Hausmann
Genomic sequence of chorioallantois vaccinia virus Ankara, the ancestor of modified vaccinia virus Ankara.
The Journal of general virology 2007;88(Pt 12):3249-59.
2007: Susanne Schneiker; Olena Perlova; Olaf Kaiser; Klaus Gerth; Aysel Alici; Matthias O Altmeyer; Daniela Bartels; Thomas Bekel; Stefan Beyer; Edna Bode; Helge B Bode; Christoph Bolten; Jomuna V Choudhuri; Sabrina Doss; Yasser A Elnakady; Bettina Frank; Lars Gaigalat; Alexander Goesmann; Carolin Groeger; Frank Gross; Lars Jelsbak; Lotte Jelsbak; Jörn Kalinowski; Carsten Kegler; Tina Knauber; Sebastian Konietzny; Maren Kopp; Lutz Krause; Daniel Krug; Bukhard Linke; Taifo Mahmud; Rosa Martinez-Arias; Alice C McHardy; Michelle Merai; Folker Meyer; Sascha Mormann; Juana Pérez Torres; Juana Perez; Silke Pradella; Shwan Rachid; Günter Raddatz; Frank Rosenau; Christian Rückert; Florenz Sasse; Maren Scharfe; Stephan C Schuster; Garret Suen; Anke Treuner-Lange; Gregory J Velicer; Frank-Jörg Vorhölter; Kira J Weissman; Roy D Welch; Silke C Wenzel; David E Whitworth; Susanne Wilhelm; Christoph Wittmann; Helmut Blöcker; Alfred Pühler; Rolf Müller
Complete genome sequence of the myxobacterium Sorangium cellulosum.
Nature biotechnology 2007;25(11):1281-9.
2007: Lutz Krause; Alice C McHardy; Tim W Nattkemper; Alfred Pühler; Jens Stoye; Folker Meyer
GISMO--gene identification using a support vector machine for ORF classification.
Nucleic acids research 2007;35(2):540-9.
2006: Andrea Krause; Adarsh Ramakumar; Daniela Bartels; Federico Battistoni; Thomas Bekel; Jens Boch; Melanie Böhm; Frauke Friedrich; Thomas Hurek; Lutz Krause; Burkhard Linke; Alice C McHardy; Abhijit Sarkar; Susanne Schneiker; Arshad Ali Syed; Rudolf Thauer; Frank-Jörg Vorhölter; Stefan Weidner; Alfred Pühler; Barbara Reinhold-Hurek; Olaf Kaiser; Alexander Goesmann
Complete genome of the mutualistic, N2-fixing grass endophyte Azoarcus sp. strain BH72.
Nature biotechnology 2006;24(11):1385-91.
2006: Lutz Krause; Naryttza N Diaz; Daniela Bartels; Robert A Edwards; Alfred Pühler; Forest Rohwer; Folker Meyer; Jens Stoye
Finding novel genes in bacterial communities isolated from the environment.
Bioinformatics (Oxford, England) 2006;22(14):e281-9.
2006: Burkhard Linke; Alice C McHardy; Heiko Neuweger; Lutz Krause; Folker Meyer
REGANOR: a gene prediction server for prokaryotic genomes and a database of high quality gene predictions for prokaryotes.
Applied bioinformatics 2006;5(3):193-8.
2005: Alexander Goesmann; Burkhard Linke; Daniela Bartels; Michael Dondrup; Lutz Krause; H Neuweger; S Oehm; T Paczian; Andreas Wilke; Folker Meyer
BRIGEP--the BRIDGE-based genome-transcriptome-proteome browser.
Nucleic acids research 2005;33(Web Server issue):W710-6.
2005: Ross Overbeek; Tadhg Begley; Ralph M Butler; Jomuna V Choudhuri; Han-Yu Chuang; Matthew cohoon; Valérie de Crécy-Lagard; Naryttza Diaz; Terry Disz; Robert Edwards; Michael Fonstein; Ed D Frank; Svetlana Gerdes; Elizabeth M Glass; Alexander Goesmann; Andrew Hanson; Dirk Iwata-Reuyl; Roy Jensen; Neema Jamshidi; Lutz Krause; Michael Kubal; Niels Larsen; Burkhard Linke; Alice C McHardy; Folker Meyer; Heiko Neuweger; Gary Olsen; Robert Olson; Andrei Osterman; Vasiliy Portnoy; Gordon Pusch; Dmitry A Rodionov; Christian Rückert; Jason Steiner; Rick Stevens; Ines Thiele; Olga Vassieva; Yuzhen Ye; Olga Zagnitko; Veronika Vonstein
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes.
Nucleic acids research 2005;33(17):5691-702.
2003: Alexander Goesmann; Burkhard Linke; Oliver Rupp; Lutz Krause; Daniela Bartels; Michael Dondrup; Alice C McHardy; Andreas Wilke; Alfred Pühler; Folker Meyer
Building a BRIDGE for the integration of heterogeneous data from functional genomics into a platform for systems biology.
Journal of biotechnology 2003;106(2-3):157-67.
2003: Michael Dondrup; Alexander Goesmann; Daniela Bartels; Jörn Kalinowski; Lutz Krause; Burkhard Linke; Oliver Rupp; Alexander Sczyrba; Alfred Pühler; Folker Meyer
EMMA: a platform for consistent storage and efficient analysis of microarray data.
Journal of biotechnology 2003;106(2-3):135-46.