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Edward Suh

Research Profile

Devices

Oligonucleotide Array Sequence Analysis

Concepts & Ideas

Procedures

Genes & Molecular Sequences

Physiology

Disorders

Prostatic Neoplasms

Activities & Behaviors

Computer Simulation

Chemicals & Drugs

Occupations

Computational Biology

Co-author Network

Publications

TOP 3
Yizhen Lu; Edward Suh; Jielin Sun; Jishan Sun; Jeffrey M. Trent; Zheng Zhang; S Lilly Zheng; Yi Zhu; Kevin Campbell; John D Carpten; Latchezar Dimitrov; David Duggan; Junjie Feng; Henrik Gronberg; William B Isaacs; Tao Jin; Andrew K Kader; Jin-Woo Kim; Seong-Tae Kim; Wennuan Liu; James Lowey; Daru Lu; Jianfeng Xu
Association of prostate cancer risk with SNPs in regions containing androgen receptor binding sites captured by ChIP-On-chip analyses.
Christiane M Robbins; Waibov A Tembe; Angela Baker; Shripad Sinari; Tracy Y Moses; Stephen Beckstrom-Sternberg; James Beckstrom-Sternberg; Michael Barrett; James Long; Arul M Chinnaiyan; James Lowey; Edward Suh; John Pearson; David Craig; David B Agus; Kenneth J Pienta; John D Carpten
Copy number and targeted mutational analysis reveals novel somatic events in metastatic prostate tumors.
Waibhav Tembe; James Lowey; Edward Suh
G-SQZ: compact encoding of genomic sequence and quality data.

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All Publications

2012: Yizhen Lu; Edward Suh; Jielin Sun; Jishan Sun; Jeffrey M. Trent; Zheng Zhang; S Lilly Zheng; Yi Zhu; Kevin Campbell; John D Carpten; Latchezar Dimitrov; David Duggan; Junjie Feng; Henrik Gronberg; William B Isaacs; Tao Jin; Andrew K Kader; Jin-Woo Kim; Seong-Tae Kim; Wennuan Liu; James Lowey; Daru Lu; Jianfeng Xu
Association of prostate cancer risk with SNPs in regions containing androgen receptor binding sites captured by ChIP-On-chip analyses.
The Prostate 2012;72(4):376-85.
2011: Christiane M Robbins; Waibov A Tembe; Angela Baker; Shripad Sinari; Tracy Y Moses; Stephen Beckstrom-Sternberg; James Beckstrom-Sternberg; Michael Barrett; James Long; Arul M Chinnaiyan; James Lowey; Edward Suh; John Pearson; David Craig; David B Agus; Kenneth J Pienta; John D Carpten
Copy number and targeted mutational analysis reveals novel somatic events in metastatic prostate tumors.
Genome research 2011;21(1):47-55.
2010: Waibhav Tembe; James Lowey; Edward Suh
G-SQZ: compact encoding of genomic sequence and quality data.
Bioinformatics (Oxford, England) 2010;26(17):2192-4.
2010: Andrew Porter; Tingting Yue; Lee Heeringa; Steven Day; Edward Suh; Brian B Haab
A motif-based analysis of glycan array data to determine the specificities of glycan-binding proteins.
Glycobiology 2010;20(3):369-80.
2009: Waibhav D Tembe; John Pearson; Nils Homer; James Lowey; Edward Suh; David Craig
Statistical comparison framework and visualization scheme for ranking-based algorithms in high-throughput genome-wide studies.
Journal of computational biology : a journal of computational molecular cell biology 2009;16(4):565-77.
2008: Allison Scott Baker; Edward Suh; Joan Prudic
Malignant catatonia: role of right unilateral electroconvulsive therapy.
The journal of ECT 2008;24(2):168-70.
2006: Qian Xu; Jianping Hua; Ulisses Braga-Neto; Zixinag Xiong; Edward Suh; Edward R Dougherty
Confidence intervals for the true classification error conditioned on the estimated error.
Technology in cancer research & treatment 2006;5(6):579-89.
2006: Ashish Choudhary; Marcel Brun; Jianping Hua; James Lowey; Edward Suh; Edward R Dougherty
Genetic test bed for feature selection.
Bioinformatics (Oxford, England) 2006;22(7):837-42.
2006: Bao-Li Chang; Ethan M Lange; Latchezar Dimitrov; Christopher J Valis; Elizabeth M Gillanders; Leslie A Lange; Kathy E Wiley; Sarah D Isaacs; Fredrik Wiklund; Agnes B Baffoe-Bonnie; Carl D Langefeld; S Lilly Zheng; Mika P Matikainen; Tarja Ikonen; Henna Fredriksson; Teuvo Tammela; Patrick C Walsh; Joan E Bailey-Wilson; Johanna Schleutker; Henrik Gronberg; Kathleen Cooney; William B Isaacs; Edward Suh; Jeffrey M. Trent; Jianfeng Xu
Two-locus genome-wide linkage scan for prostate cancer susceptibility genes with an interaction effect.
Human genetics 2006;118(6):716-24.
2006: Jianping Hua; yoganand balagurunathan; Yidong Chen; James Lowey; Michael Bittner; Zixiang Xiong; Edward Suh; Edward R Dougherty
Normalization benefits microarray-based classification.
EURASIP journal on bioinformatics & systems biology 2006;():43056.
2005: Jianfeng Xu; James Lowey; Fredrik Wiklund; Jielin Sun; Fredrik Lindmark; Fang-Chi Hsu; Latchezar Dimitrov; Baoli Chang; Aubrey R Turner; Wennan Liu; Hans-Olov Adami; Edward Suh; Jason Moore; S Lilly Zheng; William B Isaacs; Jeffrey M. Trent; Henrik Grönberg
The interaction of four genes in the inflammation pathway significantly predicts prostate cancer risk.
Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology 2005;14(11 Pt 1):2563-8.
2005: Jianping Hua; Zixiang Xiong; James Lowey; Edward Suh; Edward R Dougherty
Optimal number of features as a function of sample size for various classification rules.
Bioinformatics (Oxford, England) 2005;21(8):1509-15.
2004: Xiaobo Zhou; Xiaodong Wang; Edward R Dougherty; Daniel Russ; Edward Suh
Gene clustering based on clusterwide mutual information.
Journal of computational biology : a journal of computational molecular cell biology 2004;11(1):147-61.
2003: Jun Morikawa; Huai Li; Seungchan Kim; Kazuhiro Nishi; Satoshi Ueno; Edward Suh; Edward R Dougherty; Ilya Shmulevich; Hiroshi Shiku; Wei Zhang; Tohru Kobayashi
Identification of signature genes by microarray for acute myeloid leukemia without maturation and acute promyelocytic leukemia with t(15;17)(q22;q12)(PML/RARalpha).
International journal of oncology 2003;23(3):617-25.
2003: Deirdre Joy; Xiaorong Feng; Jianbing Mu; Tetsuya Furuya; Kesinee Chotivanich; Antoniana U Krettli; May Ho; Alex Wang; Nicholas J White; Edward Suh; Peter Beerli; Xin-zhuan Su
Early origin and recent expansion of Plasmodium falciparum.
Science (New York, N.Y.) 2003;300(5617):318-21.
2003: Tohru Kobayashi; Motoko Yamaguchi; Seungchan Kim; Jun Morikawa; Shoko Ogawa; Satoshi Ueno; Edward Suh; Edward R Dougherty; Ilya Shmulevich; Hiroshi Shiku; Wei Zhang
Microarray reveals differences in both tumors and vascular specific gene expression in de novo CD5+ and CD5- diffuse large B-cell lymphomas.
Cancer research 2003;63(1):60-6.
2002: Sally Hunsberger; Paul S Albert; dean follmann; Edward Suh
Parametric and semiparametric approaches to testing for seasonal trend in serial count data.
Biostatistics (Oxford, England) 2002;3(2):289-98.
2001: J C Venter; M D Adams; E W Myers; P W Li; R J Mural; G G Sutton; Hamilton O Smith; M Yandell; C A Evans; R A Holt; J D Gocayne; P Amanatides; R M Ballew; D H Huson; Jennifer Wortman; Q Zhang; C D Kodira; X H Zheng; L Chen; M Skupski; G. SUBRAMANIAN; P D Thomas; J Zhang; G L Gabor Miklos; C Nelson; S Broder; andrew clark; J Nadeau; Victor A McKusick; N Zinder; Arnold J Levine; Richard J Roberts; M Simon; C Slayman; M Hunkapiller; R Bolanos; A Delcher; I Dew; D Fasulo; M Flanigan; L Florea; A Halpern; S Hannenhalli; S Kravitz; S Levy; C Mobarry; K Reinert; K Remington; J Abu-Threideh; E Beasley; K Biddick; V Bonazzi; R Brandon; M Cargill; I Chandramouliswaran; R Charlab; K Chaturvedi; Z Deng; V Di Francesco; P Dunn; K Eilbeck; C Evangelista; A E Gabrielian; W Gan; W Ge; F Gong; Z Gu; P Guan; T J Heiman; M E Higgins; R R Ji; Z Ke; K A Ketchum; Z Lai; Y Lei; Z Li; J Li; Y Liang; X Lin; F Lu; G V Merkulov; N Milshina; H M Moore; A K Naik; V A Narayan; B Neelam; D Nusskern; D B Rusch; Steven L Salzberg; W Shao; B Shue; J Sun; Z Wang; A Wang; X Wang; J Wang; M Wei; R Wides; C Xiao; C Yan; A Yao; J Ye; M Zhan; W Zhang; H Zhang; Q Zhao; L Zheng; F Zhong; W Zhong; S Zhu; Shaying Zhao; D Gilbert; S Baumhueter; G Spier; C Carter; A Cravchik; T Woodage; F Ali; H An; A Awe; D Baldwin; H Baden; M Barnstead; I Barrow; K Beeson; D Busam; A Carver; A Center; M L Cheng; L Curry; S Danaher; L Davenport; R Desilets; S Dietz; K Dodson; L Doup; S Ferriera; N Garg; A Gluecksmann; B Hart; J Haynes; C Haynes; C Heiner; S Hladun; Damon Hostin; J Houck; T Howland; C Ibegwam; J Johnson; F Kalush; L Kline; S Koduru; A Love; F Mann; D May; S McCawley; T McIntosh; I McMullen; M Moy; L Moy; B Murphy; K Nelson; C Pfannkoch; E Pratts; V Puri; H Qureshi; M Reardon; R Rodriguez; Y H Rogers; D Romblad; B Ruhfel; R Scott; C Sitter; M Smallwood; E Stewart; R Strong; Edward Suh; R Thomas; N N Tint; S Tse; C Vech; Gaofeng Wang; J Wetter; S Williams; M Williams; S Windsor; E Winn-Deen; K Wolfe; J Zaveri; K Zaveri; Josep F Abril; R Guigó; M J Campbell; K V Sjolander; B Karlak; A Kejariwal; H Mi; B Lazareva; T Hatton; A Narechania; K Diemer; A Muruganujan; N Guo; S Sato; V Bafna; S Istrail; R Lippert; R Schwartz; B Walenz; S Yooseph; D Allen; A Basu; J Baxendale; L Blick; M Caminha; J Carnes-Stine; P Caulk; Y H Chiang; M Coyne; C Dahlke; A Mays; M Dombroski; M Donnelly; D Ely; S Esparham; C Fosler; H Gire; S Glanowski; K Glasser; A Glodek; M Gorokhov; K Graham; B Gropman; M Harris; J Heil; S Henderson; J Hoover; D Jennings; C Jordan; J Jordan; J Kasha; L Kagan; C Kraft; A Levitsky; M Lewis; X Liu; J Lopez; D Ma; W Majoros; J McDaniel; S Murphy; M Newman; T Nguyen; N Nguyen; M Nodell; S Pan; J Peck; M Peterson; W Rowe; R Sanders; J Scott; M Simpson; T Smith; A Sprague; T Stockwell; R Turner; E Venter; M Wang; M Wen; D Wu; M Wu; A Xia; A Zandieh; X Zhu
The sequence of the human genome.
Science (New York, N.Y.) 2001;291(5507):1304-51.