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Dirk Bumann

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Benjamin Steeb; Petra Tienz; Neil A Burton; Beatrice Claudi; Hesso Farhan; Alain Mazé; Alexander Schmidt; Dirk Bumann
Parallel exploitation of diverse host nutrients enhances salmonella virulence.
Somedutta Barat; Neil Burton; Beatrice Claudi; Dennis Kirchhoff; Alain Mazé; Konstantin Rizos; Anne K Schemmer; Alexander Schmidt; Yvonne Willer; Dirk Bumann
Immunity to intracellular Salmonella depends on surface-associated antigens.
Somedutta Barat; Alain Mazé; Benjamin Steeb; Dirk Bumann
Extensive in vivo resilience of persistent Salmonella.

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All Publications

2013: Benjamin Steeb; Petra Tienz; Neil A Burton; Beatrice Claudi; Hesso Farhan; Alain Mazé; Alexander Schmidt; Dirk Bumann
Parallel exploitation of diverse host nutrients enhances salmonella virulence.
PLoS pathogens 2013;9(4):e1003301.
2012: Somedutta Barat; Neil Burton; Beatrice Claudi; Dennis Kirchhoff; Alain Mazé; Konstantin Rizos; Anne K Schemmer; Alexander Schmidt; Yvonne Willer; Dirk Bumann
Immunity to intracellular Salmonella depends on surface-associated antigens.
PLoS pathogens 2012;8(10):e1002966.
2012: Somedutta Barat; Alain Mazé; Benjamin Steeb; Dirk Bumann
Extensive in vivo resilience of persistent Salmonella.
PloS one 2012;7(7):e42007.
2012: Yvonne Willer; Beatrice Müller; Dirk Bumann
Intestinal inflammation responds to microbial tissue load independent of pathogen/non-pathogen discrimination.
PloS one 2012;7(5):e35992.
2011: Katja Crull; Dirk Bumann; Siegfried Weiss
Influence of infection route and virulence factors on colonization of solid tumors by Salmonella enterica serovar Typhimurium.
FEMS immunology and medical microbiology 2011;62(1):75-83.
2011: Christian Stelter; Wolf-Dietrich Hardt; Rina Käppeli; Claudia König; Alexander Krah; Bärbel Stecher; Dirk Bumann
Salmonella-induced mucosal lectin RegIIIβ kills competing gut microbiota.
PloS one 2011;6(6):e20749.
2011: Ines Thiele; Daniel R Hyduke; Benjamin Steeb; Guy Fankam; Douglas K Allen; Susanna Bazzani; Pep Charusanti; Feng-Chi Chen; Ronan M T Fleming; Chao A Hsiung; Sigrid C J De Keersmaecker; Yu-Chieh Liao; Kathleen Marchal; Monica L Mo; Emre Özdemir; Anu Raghunathan; Jennifer L Reed; Sook-il Shin; Sara Sigurbjörnsdóttir; Jonas Steinmann; Suresh Sudarsan; Neil Swainston; Inge M Thijs; Karsten Zengler; Bernhard O Palsson; Joshua N Adkins; Dirk Bumann
A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2.
BMC systems biology 2011;5():8.
2009: Maike F de Buhr; Hans J Hedrich; Astrid M Westendorf; Florian Obermeier; Claudia Hofmann; Nils-H Zschemisch; Jan Buer; Dirk Bumann; Sanna Goyert; Andre Bleich
Analysis of Cd14 as a genetic modifier of experimental inflammatory bowel disease (IBD) in mice.
Inflammatory bowel diseases 2009;15(12):1824-36.
2009: Dirk Bumann
System-level analysis of Salmonella metabolism during infection.
Current opinion in microbiology 2009;12(5):559-67.
2008: Dirk Bumann
Has nature already identified all useful antibacterial targets?
Current opinion in microbiology 2008;11(5):387-92.
2008: Toni Aebischer; Dirk Bumann; H J Epple; Wolfram G Metzger; T Schneider; G Cherepnev; Anna Walduck; D Kunkel; V Moos; C Loddenkemper; I Jiadze; M Panasyuk; M Stolte; D Y Graham; M Zeitz; Thomas F Meyer
Correlation of T cell response and bacterial clearance in human volunteers challenged with Helicobacter pylori revealed by randomised controlled vaccination with Ty21a-based Salmonella vaccines.
Gut 2008;57(8):1065-72.
2007: Friederike Thöne; Björn Schwanhäusser; Daniel Becker; Matthias Ballmaier; Dirk Bumann
FACS-isolation of Salmonella-infected cells with defined bacterial load from mouse spleen.
Journal of microbiological methods 2007;71(3):220-4.
2007: Dennis Kirchhoff; Marco Frentsch; Patrick Leclerk; Dirk Bumann; Sebastian Rausch; Susanne Hartmann; Andreas Thiel; Alexander Scheffold
Identification and isolation of murine antigen-reactive T cells according to CD154 expression.
European journal of immunology 2007;37(9):2370-7.
2007: Stephan Halle; Dirk Bumann; Heike Herbrand; Yvonne Willer; Sabrina Dähne; Reinhold Förster; Oliver Pabst
Solitary intestinal lymphoid tissue provides a productive port of entry for Salmonella enterica serovar Typhimurium.
Infection and immunity 2007;75(4):1577-85.
2007: Dirk Bumann; Raphael H Valdivia
Identification of host-induced pathogen genes by differential fluorescence induction reporter systems.
Nature protocols 2007;2(4):770-7.
2006: Daniel Becker; Matthias Selbach; Claudia Rollenhagen; Matthias Ballmaier; Thomas F Meyer; Matthias Mann; Dirk Bumann
Robust Salmonella metabolism limits possibilities for new antimicrobials.
Nature 2006;440(7082):303-7.
2006: Claudia Rollenhagen; Dirk Bumann
Salmonella enterica highly expressed genes are disease specific.
Infection and immunity 2006;74(3):1649-60.
2005: Nicolas Sabarth; Robert Hurvitz; Monika Schmidt; Ursula Zimny-Arndt; Peter Jungblut; Thomas F Meyer; Dirk Bumann
Identification of Helicobacter pylori surface proteins by selective proteinase K digestion and antibody phage display.
Journal of microbiological methods 2005;62(3):345-9.
2004: Dirk Bumann; Hajar Habibi; Biao Kan; Monika Schmid; Christian Goosmann; Volker Brinkmann; Thomas F Meyer; Peter Jungblut
Lack of stage-specific proteins in coccoid Helicobacter pylori cells.
Infection and immunity 2004;72(11):6738-42.
2004: Heinz Arnold; Dirk Bumann; Melanie Felies; Britta Gewecke; Meike Sörensen; J Engelbert Gessner; Joachim Freihorst; Bernd Ulrich von Specht; Ulrich Baumann
Enhanced immunogenicity in the murine airway mucosa with an attenuated Salmonella live vaccine expressing OprF-OprI from Pseudomonas aeruginosa.
Infection and immunity 2004;72(11):6546-53.
2004: Dirk Bumann; Peter Jungblut; Thomas F Meyer
Helicobacter pylori vaccine development based on combined subproteome analysis.
Proteomics 2004;4(10):2843-8.
2004: Claudia Rollenhagen; Meike Sörensen; Konstantin Rizos; Robert Hurvitz; Dirk Bumann
Antigen selection based on expression levels during infection facilitates vaccine development for an intracellular pathogen.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(23):8739-44.
2004: Wolfram G Metzger; Erfan Mansouri; M Kronawitter; Susanne Diescher; M Soerensen; Robert Hurwitz; Dirk Bumann; Toni Aebischer; Bernd Ulrich von Specht; Thomas F Meyer
Impact of vector-priming on the immunogenicity of a live recombinant Salmonella enterica serovar typhi Ty21a vaccine expressing urease A and B from Helicobacter pylori in human volunteers.
Vaccine 2004;22(17-18):2273-7.
2003: Konstantin Rizos; Claus T Lattemann; Dirk Bumann; Thomas F Meyer; Toni Aebischer
Autodisplay: efficacious surface exposure of antigenic UreA fragments from Helicobacter pylori in Salmonella vaccine strains.
Infection and immunity 2003;71(11):6320-8.
2003: Sabine Daugelat; Jane Kowall; Jens Mattow; Dirk Bumann; Ralf Winter; Robert Hurwitz; Stefan H E Kaufmann
The RD1 proteins of Mycobacterium tuberculosis: expression in Mycobacterium smegmatis and biochemical characterization.
Microbes and infection / Institut Pasteur 2003;5(12):1082-95.
2003: Meike Sörensen; Christoph Lippuner; Toralf Kaiser; Ana Misslitz; Toni Aebischer; Dirk Bumann
Rapidly maturing red fluorescent protein variants with strongly enhanced brightness in bacteria.
FEBS letters 2003;552(2-3):110-4.
2003: Dirk Bumann
T cell receptor-transgenic mouse models for studying cellular immune responses to Salmonella in vivo.
FEMS immunology and medical microbiology 2003;37(2-3):105-9.
2002: Nicolas Sabarth; Robert Hurwitz; Thomas F Meyer; Dirk Bumann
Multiparameter selection of Helicobacter pylori antigens identifies two novel antigens with high protective efficacy.
Infection and immunity 2002;70(11):6499-503.
2002: Dirk Bumann; Petra Holland; Frank Siejak; Jan Koesling; Nicolas Sabarth; Stephanie Lamer; Ursula Zimny-Arndt; Peter Jungblut; Thomas F Meyer
A comparison of murine and human immunoproteomes of Helicobacter pylori validates the preclinical murine infection model for antigen screening.
Infection and immunity 2002;70(11):6494-8.
2002: Nicolas Sabarth; Stephanie Lamer; Ursula Zimny-Arndt; Peter Jungblut; Thomas F Meyer; Dirk Bumann
Identification of surface proteins of Helicobacter pylori by selective biotinylation, affinity purification, and two-dimensional gel electrophoresis.
The Journal of biological chemistry 2002;277(31):27896-902.
2002: Dirk Bumann; Sevil Aksu; Meike Wendland; Katharina Janek; Ursula Zimny-Arndt; Nicolas Sabarth; Thomas F Meyer; Peter Jungblut
Proteome analysis of secreted proteins of the gastric pathogen Helicobacter pylori.
Infection and immunity 2002;70(7):3396-403.
2002: Meike Wendland; Dirk Bumann
Optimization of GFP levels for analyzing Salmonella gene expression during an infection.
FEBS letters 2002;521(1-3):105-8.
2002: Dirk Bumann
Examination of Salmonella gene expression in an infected mammalian host using the green fluorescent protein and two-colour flow cytometry.
Molecular microbiology 2002;43(5):1269-83.
2002: Peter Jungblut; Dirk Bumann
Immunoproteome of Helicobacter pylori.
Methods in enzymology 2002;358():307-16.
2001: Dirk Bumann; Wolfram G Metzger; Erfan Mansouri; O Palme; Meike Wendland; Robert Hurwitz; Gaby Haas; Toni Aebischer; Bernd Ulrich von Specht; Thomas F Meyer
Safety and immunogenicity of live recombinant Salmonella enterica serovar Typhi Ty21a expressing urease A and B from Helicobacter pylori in human volunteers.
Vaccine 2001;20(5-6):845-52.
2001: Dirk Bumann
Regulated antigen expression in live recombinant Salmonella enterica serovar Typhimurium strongly affects colonization capabilities and specific CD4(+)-T-cell responses.
Infection and immunity 2001;69(12):7493-500.
2001: Dirk Bumann
In vivo visualization of bacterial colonization, antigen expression, and specific T-cell induction following oral administration of live recombinant Salmonella enterica serovar Typhimurium.
Infection and immunity 2001;69(7):4618-26.
2001: Dirk Bumann; Thomas F Meyer; Peter Jungblut
Proteome analysis of the common human pathogen Helicobacter pylori.
Proteomics 2001;1(4):473-9.
2001: Bernadette Lucas; Dirk Bumann; Anna Walduck; Jan Koesling; L Develioglu; Thomas F Meyer; Toni Aebischer
Adoptive transfer of CD4+ T cells specific for subunit A of Helicobacter pylori urease reduces H. pylori stomach colonization in mice in the absence of interleukin-4 (IL-4)/IL-13 receptor signaling.
Infection and immunity 2001;69(3):1714-21.
2000: Toni Aebischer; Bernadette Lucas; Jan Koesling; Dirk Bumann; Thomas F Meyer
How CD4(+) T cells may eliminate extracellular gastric Helicobacter?
Journal of biotechnology 2000;83(1-2):77-84.
2000: Peter Jungblut; Dirk Bumann; Gaby Haas; Ursula Zimny-Arndt; P Holland; Stephanie Lamer; Frank Siejak; A Aebischer; Thomas F Meyer
Comparative proteome analysis of Helicobacter pylori.
Molecular microbiology 2000;36(3):710-25.
2000: Dirk Bumann; C Hueck; Toni Aebischer; Thomas F Meyer
Recombinant live Salmonella spp. for human vaccination against heterologous pathogens.
FEMS immunology and medical microbiology 2000;27(4):357-64.