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Sergey Kalachikov

Research Profile

Anatomy

Chromosomes, Human, Pair 13

Procedures

Chemicals & Drugs

Concepts & Ideas

Molecular Sequence Data

Living Beings

Phenomena

Nucleic Acid Hybridization

Disorders

B-Cell Chronic Lymphocytic Leukemia

Physiology

Co-author Network

Publications

TOP 3
Sathyanarayanan V Puthanveettil; Priyamvada Rajasethupathy; James J Russo; Fahong Yu; Igor Antonov; Yun-Beom Choi; Mathew Citarella; Jingyue Ju; Sergey Kalachikov; Kevin A Karl; Maxime Kinet; Andrea B Kohn; Leonid L Moroz; Irina Morozova; Eric R Kandel
A strategy to capture and characterize the synaptic transcriptome.
Kiejin Lee; Rastislav Levicky; Harutyun Melikyan; Arsen Babajanyan; Barry Friedman; Chongchel Kim; Jungho Kim; Seungwan Kim; Jung-Ha Lee; Sergey Kalachikov
Label-free DNA microarray bioassays using a near-field scanning microwave microscope.
Ann M Knolhoff; Irina Morozova; Katherine M Nautiyal; Peter Nemes; Rae Silver; Sergey Kalachikov; Jonathan V Sweedler
Combining small-volume metabolomic and transcriptomic approaches for assessing brain chemistry.

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All Publications

2013: Sathyanarayanan V Puthanveettil; Priyamvada Rajasethupathy; James J Russo; Fahong Yu; Igor Antonov; Yun-Beom Choi; Mathew Citarella; Jingyue Ju; Sergey Kalachikov; Kevin A Karl; Maxime Kinet; Andrea B Kohn; Leonid L Moroz; Irina Morozova; Eric R Kandel
A strategy to capture and characterize the synaptic transcriptome.
Proceedings of the National Academy of Sciences of the United States of America 2013;110(18):7464-9.
2013: Kiejin Lee; Rastislav Levicky; Harutyun Melikyan; Arsen Babajanyan; Barry Friedman; Chongchel Kim; Jungho Kim; Seungwan Kim; Jung-Ha Lee; Sergey Kalachikov
Label-free DNA microarray bioassays using a near-field scanning microwave microscope.
Biosensors & bioelectronics 2013;42():326-31.
2013: Ann M Knolhoff; Irina Morozova; Katherine M Nautiyal; Peter Nemes; Rae Silver; Sergey Kalachikov; Jonathan V Sweedler
Combining small-volume metabolomic and transcriptomic approaches for assessing brain chemistry.
Analytical chemistry 2013;85(6):3136-43.
2013: Wanqiong Qiao; Yatao Liu; Sergey Kalachikov; Rastislav Levicky
Charge-neutral morpholino microarrays for nucleic acid analysis.
Analytical biochemistry 2013;434(2):207-14.
2009: Galadriel Hovel-Miner; Sergey Pampou; Sébastien P Faucher; Margaret Clarke; Irina Morozova; Pavel Morozov; James J Russo; Howard A Shuman; Sergey Kalachikov
SigmaS controls multiple pathways associated with intracellular multiplication of Legionella pneumophila.
Journal of bacteriology 2009;191(8):2461-73.
2008: Xavier Charpentier; Sébastien P Faucher; Sergey Kalachikov; Howard A Shuman
Loss of RNase R induces competence development in Legionella pneumophila.
Journal of bacteriology 2008;190(24):8126-36.
2008: J Guo; Ning Xu; Zengmin Li; Shenglong Zhang; Jian Wu; Dae Hyun Kim; Mong Sano Marma; Qinglin Meng; Huanyan Cao; Xiaoxu Li; Shundi Shi; Lin Yu; Sergey Kalachikov; James J Russo; Nicholas J Turro; Jingyue Ju
Four-color DNA sequencing with 3'-O-modified nucleotide reversible terminators and chemically cleavable fluorescent dideoxynucleotides.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(27):9145-50.
2008: Wei Xia; Satoru Nagase; Amy Gerstein Montia; Sergey Kalachikov; Megan Keniry; Tao Su; Lorenzo Memeo; Hanina Hibshoosh; Ramon Parsons
BAF180 is a critical regulator of p21 induction and a tumor suppressor mutated in breast cancer.
Cancer research 2008;68(6):1667-74.
2007: Erna Magnúsdóttir; Sergey Kalachikov; Koji Mizukoshi; David Savitsky; Akemi Ishida-Yamamoto; Andrey Panteleyev; Kathryn Calame
Epidermal terminal differentiation depends on B lymphocyte-induced maturation protein-1.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(38):14988-93.
2006: Leonid L Moroz; John R Edwards; Sathyanarayanan V Puthanveettil; Andrea B Kohn; Thomas Ha; Andreas Heyland; Bjarne Knudsen; Anuj Sahni; Fahong Yu; Li Liu; Sami H Jezzini; Peter Lovell; William Iannucculli; Minchen Chen; Tuan Nguyen; Huitao Sheng; Regina Shaw; Sergey Kalachikov; Yuri V Panchin; William G Farmerie; James J Russo; Jingyue Ju; Eric R Kandel
Neuronal transcriptome of Aplysia: neuronal compartments and circuitry.
Cell 2006;127(7):1453-67.
2006: Songmei Geng; Alexandre Mezentsev; Sergey Kalachikov; Klaus Raith; Dennis R Roop; Andrey Panteleyev
Targeted ablation of Arnt in mouse epidermis results in profound defects in desquamation and epidermal barrier function.
Journal of cell science 2006;119(Pt 23):4901-12.
2006: H Choi; Melodie R Winawer; Sergey Kalachikov; Timothy A Pedley; W Allen Hauser; Ruth Ottman
Classification of partial seizure symptoms in genetic studies of the epilepsies.
Neurology 2006;66(11):1648-53.
2006: Vincent Bruno; Sergey Kalachikov; Ryan Subaran; Clarissa J Nobile; Christos Kyratsous; Aaron P Mitchell
Control of the C. albicans cell wall damage response by transcriptional regulator Cas5.
PLoS pathogens 2006;2(3):e21.
2006: Angel A Martí; Xiaoxu Li; Steffen Jockusch; Zengmin Li; Bindu Raveendra; Sergey Kalachikov; James J Russo; Irina Morozova; Sathyanarayanan V Puthanveettil; Jingyue Ju; Nicholas J Turro
Pyrene binary probes for unambiguous detection of mRNA using time-resolved fluorescence spectroscopy.
Nucleic acids research 2006;34(10):3161-8.
2005: Karim Suwwan de Felipe; Sergey Pampou; Oliver S Jovanovic; Christopher D Pericone; Senna F Ye; Sergey Kalachikov; Howard A Shuman
Evidence for acquisition of Legionella type IV secretion substrates via interdomain horizontal gene transfer.
Journal of bacteriology 2005;187(22):7716-26.
2005: Barry Friedman; Mariafrancis A Gaspar; Sergey Kalachikov; Kiejin Lee; Rastislav Levicky; Gang Shen; Hyunjun Yoo
Sensitive, label-free DNA diagnostics based on near-field microwave imaging.
Journal of the American Chemical Society 2005;127(27):9666-7.
2004: Minchen Chien; Irina Morozova; Shundi Shi; Huitao Sheng; Jing Chen; Shawn Gomez; Gifty Asamani; Kendra Hill; John Nuara; Marc Feder; Justin Rineer; Joseph J Greenberg; Valeria Steshenko; Samantha H Park; Baohui Zhao; Elita Teplitskaya; John R Edwards; Sergey Pampou; Anthi Georghiou; I-Chun Chou; William Iannuccilli; Michael E Ulz; Dae H Kim; Alex Geringer-Sameth; Curtis Goldsberry; Pavel Morozov; Stuart G Fischer; Gil Segal; Xiaoyan Qu; Andrey Rzhetsky; Peisen Zhang; Eftihia Cayanis; Pieter J De Jong; Jingyue Ju; Sergey Kalachikov; Howard A Shuman; James J Russo
The genomic sequence of the accidental pathogen Legionella pneumophila.
Science (New York, N.Y.) 2004;305(5692):1966-8.
2004: Ruth Ottman; Melodie R Winawer; Sergey Kalachikov; Christie Barker-Cummings; T Conrad Gilliam; Timothy A Pedley; W Allen Hauser
LGI1 mutations in autosomal dominant partial epilepsy with auditory features.
Neurology 2004;62(7):1120-6.
2003: Robert Moccia; Dillon Chen; Vlasta Lyles; Estreya Kapuya; Yaping E; Sergey Kalachikov; Christian M T Spahn; Joachim Frank; Eric R Kandel; Mark Barad; Kelsey C Martin
An unbiased cDNA library prepared from isolated Aplysia sensory neuron processes is enriched for cytoskeletal and translational mRNAs.
The Journal of neuroscience : the official journal of the Society for Neuroscience 2003;23(28):9409-17.
2002: Sergey Kalachikov; Oleg V Evgrafov; Barbara Ross; Melodie R Winawer; Christie Barker-Cummings; Filippo Martinelli Boneschi; Chang Choi; Pavel Morozov; Kamna Das; Elita Teplitskaya; Andrew Yu; Eftihia Cayanis; Graciela Penchaszadeh; Andreas Kottmann; Timothy A Pedley; W Allen Hauser; Ruth Ottman; T Conrad Gilliam
Mutations in LGI1 cause autosomal-dominant partial epilepsy with auditory features.
Nature genetics 2002;30(3):335-41.
2001: Anna Migliazza; Francesc Bosch; H Komatsu; Eftihia Cayanis; Stefano Martinotti; Elena Toniato; E Guccione; X Qu; Minchen Chien; Vundavalli Murty; Gianluca Gaidano; Giorgio Inghirami; P Zhang; S Fischer; Sergey Kalachikov; J Russo; IS Edelman; Argiris Efstratiadis; Riccardo Dalla-Favera
Nucleotide sequence, transcription map, and mutation analysis of the 13q14 chromosomal region deleted in B-cell chronic lymphocytic leukemia.
Blood 2001;97(7):2098-104.
2000: Andrey Rzhetsky; T Koike; Sergey Kalachikov; Shawn Gomez; Michael Krauthammer; S H Kaplan; Pauline Kra; James J Russo; Carol Friedman
A knowledge model for analysis and simulation of regulatory networks.
Bioinformatics (Oxford, England) 2000;16(12):1120-8.
2000: Zemin Deng; Jane H Morse; Susan L Slager; Nieves Cuervo; K J Moore; G Venetos; Sergey Kalachikov; Eftihia Cayanis; SG Fischer; Robyn J Barst; Susan E Hodge; James A Knowles
Familial primary pulmonary hypertension (gene PPH1) is caused by mutations in the bone morphogenetic protein receptor-II gene.
American journal of human genetics 2000;67(3):737-44.
2000: Anna Migliazza; Eftihia Cayanis; F Bosch-Albareda; H Komatsu; Stefano Martinotti; Elena Toniato; Sergey Kalachikov; MF Bonaldo; P Jelene; X Ye; Andrey Rzhetsky; X Qu; Minchen Chien; Giorgio Inghirami; Gianluca Gaidano; Umberto Vitolo; Giuseppe Saglio; Luigi Resegotti; P Zhang; MB Soares; J Russo; SG Fischer; IS Edelman; Argiris Efstratiadis; Riccardo Dalla-Favera
Molecular pathogenesis of B-cell chronic lymphocytic leukemia: analysis of 13q14 chromosomal deletions.
Current topics in microbiology and immunology 2000;252():275-84.
1999: Vincent M Aita; Xiao Huan Liang; Vundavalli Murty; David L Pincus; W Yu; Eftihia Cayanis; Sergey Kalachikov; T Conrad Gilliam; Beth Levine
Cloning and genomic organization of beclin 1, a candidate tumor suppressor gene on chromosome 17q21.
Genomics 1999;59(1):59-65.
1998: WG van Eyndhoven; Dale Frank; Sergey Kalachikov; A M Cleary; D I Hong; E Cho; S Nasr; A J Perez; WJ Mackus; Eftihia Cayanis; Sandra J Wellington; SG Fischer; Dorothy Warburton; S Lederman
A single gene for human TRAF-3 at chromosome 14q32.3 encodes a variety of mRNA species by alternative polyadenylation, mRNA splicing and transcription initiation.
Molecular immunology 1998;35(18):1189-206.
1998: VA Adarichev; Sergey Kalachikov; A V Kiseliova; GM Dymshits
Molecular hybridization probes prepared with 4-aminooxybutylamine.
Bioconjugate chemistry 1998;9(6):671-5.
1998: Andrey Rzhetsky; Sergey Kalachikov; X Ye; P Zhang; James J Russo
Tools for visualization and integration of intermediate sequencing results in large disease gene discovery projects.
Gene 1998;208(1):31-5.
1998: Eftihia Cayanis; James J Russo; Sergey Kalachikov; X Ye; S H Park; Ivana Sunjevaric; MF Bonaldo; Lee N Lawton; VS Venkatraj; Eric A Schon; MB Soares; Rodney Rothstein; Dorothy Warburton; IS Edelman; P Zhang; Argiris Efstratiadis; SG Fischer
High-resolution YAC-cosmid-STS map of human chromosome 13.
Genomics 1998;47(1):26-43.
1997: BR Wong; Jaerang Rho; Joseph R Arron; E Robinson; J Orlinick; M Chao; Sergey Kalachikov; E Cayani; FS Bartlett; Wayne N Frankel; SY Lee; Yongwon Choi
TRANCE is a novel ligand of the tumor necrosis factor receptor family that activates c-Jun N-terminal kinase in T cells.
The Journal of biological chemistry 1997;272(40):25190-4.
1997: Sergey Kalachikov; Anna Migliazza; Eftihia Cayanis; N S Fracchiolla; MF Bonaldo; Lee N Lawton; P Jelenc; X Ye; X Qu; Minchen Chien; RS Hauptschein; Gianluca Gaidano; Umberto Vitolo; Giuseppe Saglio; Luigi Resegotti; V Brodjansky; N Yankovsky; P Zhang; MB Soares; J Russo; IS Edelman; Argiris Efstratiadis; Riccardo Dalla-Favera; SG Fischer
Cloning and gene mapping of the chromosome 13q14 region deleted in chronic lymphocytic leukemia.
Genomics 1997;42(3):369-77.
1996: SG Fischer; Eftihia Cayanis; M de Fatima Bonaldo; Anne M Bowcock; LL Deaven; IS Edelman; T Gallardo; Sergey Kalachikov; L Lawton; Jonathan L Longmire; Michael Lovett; S Osborne-Lawrence; Rodney Rothstein; James J Russo; MB Soares; Ivana Sunjevaric; VS Venkatraj; Dorothy Warburton; P Zhang; Argiris Efstratiadis
A high-resolution annotated physical map of the human chromosome 13q12-13 region containing the breast cancer susceptibility locus BRCA2.
Proceedings of the National Academy of Sciences of the United States of America 1996;93(2):690-4.
1996: D Warburton; S H Shaw; T C Matise; Sergey Kalachikov; S Fischer
Report and abstracts of the Third International Workshop on Human Chromosome 13 Mapping. Tarrytown, New York, October 29-31, 1995.
Cytogenetics and cell genetics 1996;75(2-3):85-110.
1994: Sergey Kalachikov; A E Kel'; GM Dymshits; A M Ishov; S N Borkhsenius
[Cloning universal probes for detecting mycoplasma contamination of cell cultures].
Molekuliarnaia biologiia 1994;28(2):444-52.
1993: A N Popov; VA Adarichev; Sergey Kalachikov; E S Mishina; GM Dymshits
[The isolation of the bovine leukemia provirus by the polymerase chain reaction with subsequent nonradioactive blot hybridization].
Voprosy virusologii 1993;38(3):113-6.
1992: Sergey Kalachikov; B A Adarichev; GM Dymshits
[Immobilization of DNA on microporous membranes using UV-irradiation].
Bioorganicheskaia khimiia 1992;18(1):52-62.
1987: VA Adarichev; GM Dymshits; Sergey Kalachikov; P I Pozdniakov; R I Salganik
[DNA carrying aliphatic amino groups and the use of its fluorescent derivative as a probe in molecular hybridization].
Bioorganicheskaia khimiia 1987;13(8):1066-9.
1986: L A Frumgarts; S M Kipriianov; Sergey Kalachikov; N A Dudareva; GM Dymshits
[Preparation of fluorescent-labeled DNA and its use as a probe in molecular hybridization].
Bioorganicheskaia khimiia 1986;12(11):1508-13.