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Alexander Rakin

Research Profile

Living Beings

Chemicals & Drugs

Concepts & Ideas

Disorders

Yersinia Infections

Genes & Molecular Sequences

Physiology

Gene Expression Regulation, Bacterial

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Publications

TOP 3
Alexander Rakin; Lukas Schneider; Olga Podladchikova
Hunger for iron: the alternative siderophore iron scavenging systems in highly virulent Yersinia.
Debora Garzetti; Juergen Heesemann; Hicham Bouabe; Alexander Rakin
Tracing genomic variations in two highly virulent Yersinia enterocolitica strains with unequal ability to compete for host colonization.
Olga Podladchikova; Uladzimir Antonenka; Violetta Rykova; Alexander Rakin
Yersinia pestis autoagglutination is mediated by HCP-like protein and siderophore Yersiniachelin (Ych).

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All Publications

2012: Alexander Rakin; Lukas Schneider; Olga Podladchikova
Hunger for iron: the alternative siderophore iron scavenging systems in highly virulent Yersinia.
Frontiers in cellular and infection microbiology 2012;2():151.
2012: Debora Garzetti; Juergen Heesemann; Hicham Bouabe; Alexander Rakin
Tracing genomic variations in two highly virulent Yersinia enterocolitica strains with unequal ability to compete for host colonization.
BMC genomics 2012;13():467.
2012: Olga Podladchikova; Uladzimir Antonenka; Violetta Rykova; Alexander Rakin
Yersinia pestis autoagglutination is mediated by HCP-like protein and siderophore Yersiniachelin (Ych).
Advances in experimental medicine and biology 2012;954():289-92.
2012: Anna M Stenkova; Valeri A Rasskazov; Evgenia P Bystritskaya; Konstantin V Guzev; MP Isaeva; Alexander Rakin
The molecular phylogeny of the gyrB gene: a molecular marker for systematic characterization of the genus Yersinia.
Advances in experimental medicine and biology 2012;954():53-6.
2012: MP Isaeva; Evgenia P Bystritskaya; Konstantin V Guzev; Valeri A Rasskazov; FN Shubin; Anna M Stenkova; Alexander Rakin
Diversity and adaptive evolution of a major porin gene (ompF) in Yersinia pseudotuberculosis.
Advances in experimental medicine and biology 2012;954():39-43.
2012: Alexander Rakin; Julia Batzilla; Debora Garzetti; Jürgen Heesemann
Gains and Losses in Yersinia enterocolitica subsp. palearctica Genomes.
Advances in experimental medicine and biology 2012;954():23-9.
2012: Elise Pinta; Kamila Rabsztyn; Alexander Rakin; Julia Batzilla; Tiina Kasanen; Zhilin Li; Maria Pajunen; Mikael Skurnik
Identification of three oligo-/polysaccharide-specific ligases in Yersinia enterocolitica.
Molecular microbiology 2012;83(1):125-36.
2011: Julia Batzilla; Juergen Heesemann; Alexander Rakin
The pathogenic potential of Yersinia enterocolitica 1A.
International journal of medical microbiology : IJMM 2011;301(7):556-61.
2011: Olga Podladchikova; Uladzimir Antonenka; Jürgen Heesemann; Alexander Rakin
Yersinia pestis autoagglutination factor is a component of the type six secretion system.
International journal of medical microbiology : IJMM 2011;301(7):562-9.
2011: Frank Uliczka; Julia Batzilla; Angelika Fruth; Jürgen Heesemann; Fabio Pisano; Alexander Rakin; Manfred Rohde; Julia Schaake; Mikael Skurnik; Tatjana Stolz; Eckhard Strauch; Petra Dersch
Unique cell adhesion and invasion properties of Yersinia enterocolitica O:3, the most frequent cause of human Yersiniosis.
PLoS pathogens 2011;7(7):e1002117.
2011: Julia Batzilla; Dirk Höper; Uladzimir Antonenka; Jürgen Heesemann; Alexander Rakin
Complete genome sequence of Yersinia enterocolitica subsp. palearctica serogroup O:3.
Journal of bacteriology 2011;193(8):2067.
2011: Julia Batzilla; Jürgen Heesemann; Dirk Höper; Uladzimir Antonenka; Alexander Rakin
Yersinia enterocolitica palearctica serobiotype O:3/4--a successful group of emerging zoonotic pathogens.
BMC genomics 2011;12():348.
2009: Aleksandra Szwagierczak; Uladzimir Antonenka; Grzegorz M Popowicz; Tomasz Sitar; Tad A Holak; Alexander Rakin
Structures of the arm-type binding domains of HPI and HAI7 integrases.
The Journal of biological chemistry 2009;284(46):31664-71.
2009: Rolf Reissbrodt; Walter P Hammes; Fabio dal Bello; Rita Prager; Angelika Fruth; Klaus Hantke; Alexander Rakin; Marjanca Starcic Erjavec; Peter H Williams
Inhibition of growth of Shiga toxin-producing Escherichia coli by nonpathogenic Escherichia coli.
FEMS microbiology letters 2009;290(1):62-9.
2008: Hanna Hartmann; Holger K Eltzschig; Helena Wurz; Klaus Hantke; Alexander Rakin; Amir S Yazdi; Gianluca Matteoli; Erwin Bohn; Ingo B Autenrieth; Jörn Karhausen; Diana Neumann; Sean P Colgan; Volkhard A J Kempf
Hypoxia-independent activation of HIF-1 by enterobacteriaceae and their siderophores.
Gastroenterology 2008;134(3):756-67.
2007: Xiaoyi Wang; Yanping Han; Yanjun Li; Zhaobiao Guo; Yajun Song; Yafang Tan; Zongmin Du; Alexander Rakin; Dongsheng Zhou; Ruifu Yang
Yersinia genome diversity disclosed by Yersinia pestis genome-wide DNA microarray.
Canadian journal of microbiology 2007;53(11):1211-21.
2007: Rafał Gierczyński; Andrey Golubov; Heinrich Neubauer; Jeannette N Pham; Alexander Rakin
Development of multiple-locus variable-number tandem-repeat analysis for Yersinia enterocolitica subsp. palearctica and its application to bioserogroup 4/O3 subtyping.
Journal of clinical microbiology 2007;45(8):2508-15.
2007: Gilles Vergnaud; Yanjun Li; Olivier Gorgé; Yujun Cui; Yajun Song; Dongsheng Zhou; Ibtissem Grissa; Svetlana V. Dentovskaya; Mikhail E Platonov; Alexander Rakin; Sergey V Balakhonov; Heinrich Neubauer; Christine Pourcel; Andrey Anisimov; Ruifu Yang
Analysis of the three Yersinia pestis CRISPR loci provides new tools for phylogenetic studies and possibly for the investigation of ancient DNA.
Advances in experimental medicine and biology 2007;603():327-38.
2006: Uladzimir Antonenka; Christina Nölting; Jürgen Heesemann; Alexander Rakin
Independent acquisition of site-specific recombination factors by asn tRNA gene-targeting genomic islands.
International journal of medical microbiology : IJMM 2006;296(6):341-52.
2005: Roman Anisimov; Daniela Brem; Jürgen Heesemann; Alexander Rakin
Molecular mechanism of YbtA-mediated transcriptional regulation of divergent overlapping promoters ybtA and irp6 of Yersinia enterocolitica.
FEMS microbiology letters 2005;250(1):27-32.
2005: Andrey Golubov; Rafal Gierczynski; Jürgen Heesemann; Alexander Rakin
A novel insertion sequence element, IS Yen2, as an epidemiological marker for weakly pathogenic bioserotypes of Yersinia enterocolitica.
International journal of medical microbiology : IJMM 2005;295(4):213-26.
2005: Uladzimir Antonenka; Christina Nölting; Jürgen Heesemann; Alexander Rakin
Horizontal transfer of Yersinia high-pathogenicity island by the conjugative RP4 attB target-presenting shuttle plasmid.
Molecular microbiology 2005;57(3):727-34.
2005: Roman Anisimov; Daniela Brem; Jürgen Heesemann; Alexander Rakin
Transcriptional regulation of high pathogenicity island iron uptake genes by YbtA.
International journal of medical microbiology : IJMM 2005;295(1):19-28.
2004: Rafał Gierczyński; Stanisław Kałuzewski; Alexander Rakin; Marek Jagielski; Aleksandra A Zasada; Antoni Jakubczak; Bogna Borkowska-Opacka; Waldemar Rastawicki
Intriguing diversity of Bacillus anthracis in eastern Poland--the molecular echoes of the past outbreaks.
FEMS microbiology letters 2004;239(2):235-40.
2004: Andrey Golubov; Heinrich Neubauer; Christina Nölting; Jürgen Heesemann; Alexander Rakin
Structural organization of the pFra virulence-associated plasmid of rhamnose-positive Yersinia pestis.
Infection and immunity 2004;72(10):5613-21.
2004: Soren Schubert; Alexander Rakin; Jürgen Heesemann
The Yersinia high-pathogenicity island (HPI): evolutionary and functional aspects.
International journal of medical microbiology : IJMM 2004;294(2-3):83-94.
2003: Herbert Tomaso; Emil C Reisinger; Sascha Al Dahouk; Dimitrios Frangoulidis; Alexander Rakin; Olfert Landt; Heinrich Neubauer
Rapid detection of Yersinia pestis with multiplex real-time PCR assays using fluorescent hybridisation probes.
FEMS immunology and medical microbiology 2003;38(2):117-26.
2003: Andrey Golubov; Jürgen Heesemann; Alexander Rakin
Uncovering genomic differences in human pathogenic Yersinia enterocolitica.
FEMS immunology and medical microbiology 2003;38(2):107-11.
2003: Stewart J Hinchliffe; Karen E Isherwood; Richard A Stabler; Michael B Prentice; Alexander Rakin; Richard A Nichols; Petra C F Oyston; Jason Hinds; Richard Titball; Brendan W Wren
Application of DNA microarrays to study the evolutionary genomics of Yersinia pestis and Yersinia pseudotuberculosis.
Genome research 2003;13(9):2018-29.
2003: Azuka N Iwobi; Jürgen Heesemann; Emilio Garcia; Emeka I Igwe; C Noelting; Alexander Rakin
Novel virulence-associated type II secretion system unique to high-pathogenicity Yersinia enterocolitica.
Infection and immunity 2003;71(4):1872-9.
2003: Uladzimir Antonenka; V Pawlow; Jürgen Heesemann; Alexander Rakin
Characterization of a novel unique restriction-modification system from Yersinia enterocolitica O:8 1B.
FEMS microbiology letters 2003;219(2):249-52.
2003: Azuka N Iwobi; Alexander Rakin; Emilio Garcia; Jürgen Heesemann
Subtractive hybridization uncovers novel pathogenicity-associated loci in Yersinia enterocolitica.
Advances in experimental medicine and biology 2003;529():25-9.
2003: Alexander Rakin; Andrey Golubov; Azuka N Iwobi; Jürgen Heesemann
Tracing acquisitions and losses in Yersinia genomes.
Advances in experimental medicine and biology 2003;529():19-23.
2002: Azuka N Iwobi; Alexander Rakin; Emilio Garcia; Jürgen Heesemann
Representational difference analysis uncovers a novel IS10-like insertion element unique to pathogenic strains of Yersinia enterocolitica.
FEMS microbiology letters 2002;210(2):251-5.
2001: Christoph A Jacobi; S Gregor; Alexander Rakin; Jürgen Heesemann
Expression analysis of the yersiniabactin receptor gene fyuA and the heme receptor hemR of Yersinia enterocolitica in vitro and in vivo using the reporter genes for green fluorescent protein and luciferase.
Infection and immunity 2001;69(12):7772-82.
2001: Daniela Brem; Cosima Pelludat; Alexander Rakin; Christoph A Jacobi; Jürgen Heesemann
Functional analysis of yersiniabactin transport genes of Yersinia enterocolitica.
Microbiology (Reading, England) 2001;147(Pt 5):1115-27.
2001: Konrad Trülzsch; Andreas Roggenkamp; Cosima Pelludat; Alexander Rakin; C Jacobi; Jürgen Heesemann
Cloning and characterization of the gene encoding periplasmic 2',3'-cyclic phosphodiesterase of Yersinia enterocolitica O:8.
Microbiology (Reading, England) 2001;147(Pt 1):203-13.
2001: Alexander Rakin; C Noelting; P Schropp; Jürgen Heesemann
Integrative module of the high-pathogenicity island of Yersinia.
Molecular microbiology 2001;39(2):407-15.
2000: E Saken; Alexander Rakin; Jürgen Heesemann
Molecular characterization of a novel siderophore-independent iron transport system in Yersinia.
International journal of medical microbiology : IJMM 2000;290(1):51-60.
2000: Alexander Rakin; Soren Schubert; I Guilvout; E Carniel; Jürgen Heesemann
Local hopping of IS3 elements into the A+T-rich part of the high-pathogenicity island in Yersinia enterocolitica 1B, O:8.
FEMS microbiology letters 2000;182(2):225-9.
1999: Soren Schubert; Alexander Rakin; D Fischer; J Sorsa; Jürgen Heesemann
Characterization of the integration site of Yersinia high-pathogenicity island in Escherichia coli.
FEMS microbiology letters 1999;179(2):409-14.
1999: Alexander Rakin; C Noelting; Soren Schubert; Jürgen Heesemann
Common and specific characteristics of the high-pathogenicity island of Yersinia enterocolitica.
Infection and immunity 1999;67(10):5265-74.
1998: Christoph A Jacobi; Andreas Roggenkamp; Alexander Rakin; Robert Zumbihl; Lorenz Leitritz; Jürgen Heesemann
In vitro and in vivo expression studies of yopE from Yersinia enterocolitica using the gfp reporter gene.
Molecular microbiology 1998;30(4):865-82.
1998: Karlheinz Trebesius; D Harmsen; Alexander Rakin; J Schmelz; Jürgen Heesemann
Development of rRNA-targeted PCR and in situ hybridization with fluorescently labelled oligonucleotides for detection of Yersinia species.
Journal of clinical microbiology 1998;36(9):2557-64.
1998: Cosima Pelludat; Alexander Rakin; Christoph A Jacobi; Soren Schubert; Jürgen Heesemann
The yersiniabactin biosynthetic gene cluster of Yersinia enterocolitica: organization and siderophore-dependent regulation.
Journal of bacteriology 1998;180(3):538-46.
1998: Soren Schubert; Alexander Rakin; H Karch; E Carniel; J Heesemann
Prevalence of the "high-pathogenicity island" of Yersinia species among Escherichia coli strains that are pathogenic to humans.
Infection and immunity 1998;66(2):480-5.
1996: Alexander Rakin; E Boolgakowa; Jürgen Heesemann
Structural and functional organization of the Yersinia pestis bacteriocin pesticin gene cluster.
Microbiology (Reading, England) 1996;142 ( Pt 12)():3415-24.
1995: Alexander Rakin; Jürgen Heesemann
The established Yersinia pestis biovars are characterized by typical patterns of I-CeuI restriction fragment length polymorphism.
Molekuliarnaia genetika, mikrobiologiia i virusologiia 1995;(3):26-9.
1995: Alexander Rakin; Jürgen Heesemann
Virulence-associated fyuA/irp2 gene cluster of Yersinia enterocolitica biotype 1B carries a novel insertion sequence IS1328.
FEMS microbiology letters 1995;129(2-3):287-92.
1995: Alexander Rakin; P Urbitsch; Jürgen Heesemann
Evidence for two evolutionary lineages of highly pathogenic Yersinia species.
Journal of bacteriology 1995;177(9):2292-8.
1995: Alexander Rakin; Jürgen Heesemann
Yersiniabactin/pesticin receptor: a component of an iron uptake system of highly pathogenic Yersinia.
Contributions to microbiology and immunology 1995;13():244-7.
1994: O N Podladchikova; G G Dikhanov; Alexander Rakin; J Heesemann
Nucleotide sequence and structural organization of Yersinia pestis insertion sequence IS100.
FEMS microbiology letters 1994;121(3):269-74.
1994: Alexander Rakin; E Saken; Dag Harmsen; Jürgen Heesemann
The pesticin receptor of Yersinia enterocolitica: a novel virulence factor with dual function.
Molecular microbiology 1994;13(2):253-63.
1993: Jürgen Heesemann; Klaus Hantke; T Vocke; E Saken; Alexander Rakin; I Stojiljkovic; R Berner
Virulence of Yersinia enterocolitica is closely associated with siderophore production, expression of an iron-repressible outer membrane polypeptide of 65,000 Da and pesticin sensitivity.
Molecular microbiology 1993;8(2):397-408.
1990: Alexander Rakin; L K Kazachenko
[The sensitivity of Yersinia to bacteriophage Mu].
Zhurnal mikrobiologii, epidemiologii, i immunobiologii 1990;(8):17-20.
1990: Alexander Rakin; L K Kazachenko
[Isolation of transmissible cointegrates of Yersinia pestis plasmids pYV and pYT with the plasmid RP4::Mu cts 62, IncP1].
Molekuliarnaia genetika, mikrobiologiia i virusologiia 1990;(6):14-7.
1990: Alexander Rakin; V A Rykova
[The use of mini-Mu-replicons for cloning of various structural genes of Yersinia pestis].
Molekuliarnaia genetika, mikrobiologiia i virusologiia 1990;(5):24-7.
1985: Alexander Rakin; SA Lebedeva; G I Aleshkin
[Interaction of Yersinia pestis bacteria with bacteriophage mu].
Molekuliarnaia genetika, mikrobiologiia i virusologiia 1985;(9):6-11.