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Xiwei Wu

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Oligonucleotide Array Sequence Analysis

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TOP 3
Maria A Hahn; Yong Jiang; Seung-Gi Jin; Jonathan Jui; Arthur X Li; Gerd P Pfeifer; Runxiang Qiu; Jun Wang; Xiwei Wu; Heying Zhang; Qiang Lu
Dynamics of 5-hydroxymethylcytosine and chromatin marks in Mammalian neurogenesis.
Stella Tommasi; Annette Weninger; Xiwei Wu; Albert Zheng; Steven E Bates; Monica Hollstein; Xuejun Arthur Li; Ahmad Besaratinia
Mammalian cells acquire epigenetic hallmarks of human cancer during immortalization.
Stella Tommasi; Xiwei Wu; Jae-In Yoon; Albert Zheng; Arthur Xuejun Li; Ahmad Besaratinia
Whole DNA methylome profiling in mice exposed to secondhand smoke.

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All Publications

2013: Maria A Hahn; Yong Jiang; Seung-Gi Jin; Jonathan Jui; Arthur X Li; Gerd P Pfeifer; Runxiang Qiu; Jun Wang; Xiwei Wu; Heying Zhang; Qiang Lu
Dynamics of 5-hydroxymethylcytosine and chromatin marks in Mammalian neurogenesis.
Cell reports 2013;3(2):291-300.
2013: Stella Tommasi; Annette Weninger; Xiwei Wu; Albert Zheng; Steven E Bates; Monica Hollstein; Xuejun Arthur Li; Ahmad Besaratinia
Mammalian cells acquire epigenetic hallmarks of human cancer during immortalization.
Nucleic acids research 2013;41(1):182-95.
2012: Stella Tommasi; Xiwei Wu; Jae-In Yoon; Albert Zheng; Arthur Xuejun Li; Ahmad Besaratinia
Whole DNA methylome profiling in mice exposed to secondhand smoke.
Epigenetics : official journal of the DNA Methylation Society 2012;7(11):1302-14.
2012: Tibor A Rauch; Arthur D Riggs; Zunde Wang; Xiwei Wu; Kemp H Kernstine; Gerd P Pfeifer
DNA methylation biomarkers for lung cancer.
Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine 2012;33(2):287-96.
2012: Jiehua Zhou; Mark A Behlke; Ashley M Jacobi; Min-Sun Song; Xiwei Wu; John J Rossi
Deep Sequencing Analyses of DsiRNAs Reveal the Influence of 3' Terminal Overhangs on Dicing Polarity, Strand Selectivity, and RNA Editing of siRNAs.
Molecular therapy. Nucleic acids 2012;1():e17.
2012: Christoph Lahtz; Arthur X Li; Steven E Bates; Maria A Hahn; Yong Jiang; Xiwei Wu; Gerd P Pfeifer
Gamma irradiation does not induce detectable changes in DNA methylation directly following exposure of human cells.
PloS one 2012;7(9):e44858.
2011: Shikha Gaur; Frank Un; Xiwei Wu; Lixin Yang; Linling Chen; Yun Yen
Inhibitors of mTOR overcome drug resistance from topoisomerase II inhibitors in solid tumors.
Cancer letters 2011;311(1):20-8.
2011: Seung-Gi Jin; Arthur X Li; Xiwei Wu; Gerd P Pfeifer
Genomic mapping of 5-hydroxymethylcytosine in the human brain.
Nucleic acids research 2011;39(12):5015-24.
2011: Purnima Singh; Xiwei Wu; Dong-Hoon Lee; Arthur X Li; Tibor Rauch; Gerd P Pfeifer; Jeffrey R Mann; Piroska E Szabó
Chromosome-wide analysis of parental allele-specific chromatin and DNA methylation.
Molecular and cellular biology 2011;31(8):1757-70.
2011: Hanjun Qin; Zunde Wang; Weiting Du; Wen-Hui Lee; Xiwei Wu; Arthur D Riggs; Chih-Pin Liu
Killer cell Ig-like receptor (KIR) 3DL1 down-regulation enhances inhibition of type 1 diabetes by autoantigen-specific regulatory T cells.
Proceedings of the National Academy of Sciences of the United States of America 2011;108(5):2016-21.
2011: Maria A Hahn; Xiwei Wu; Arthur X Li; Torsten Hahn; Gerd P Pfeifer
Relationship between gene body DNA methylation and intragenic H3K9me3 and H3K36me3 chromatin marks.
PloS one 2011;6(4):e18844.
2010: Xiwei Wu; Tibor Rauch; Xueyan Zhong; Patrick Williams; Farida Latif; Dietmar Krex; Gerd P Pfeifer
CpG island hypermethylation in human astrocytomas.
Cancer research 2010;70(7):2718-27.
2010: Stella Tommasi; Sang-in Kim; Xueyan Zhong; Xiwei Wu; Gerd P Pfeifer; Ahmad Besaratinia
Investigating the epigenetic effects of a prototype smoke-derived carcinogen in human cells.
PloS one 2010;5(5):e10594.
2009: John A Zaia; Xiuli Li; Anne E Franck; Xiwei Wu; Lia Thao; Ghislaine Gallez-Hawkins
Biologic and immunologic effects of knockout of human cytomegalovirus pp65 nuclear localization signal.
Clinical and vaccine immunology : CVI 2009;16(6):935-43.
2009: Tibor Rauch; Xiwei Wu; Xueyan Zhong; Arthur D Riggs; Gerd P Pfeifer
A human B cell methylome at 100-base pair resolution.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(3):671-8.
2009: Stella Tommasi; Deborah L Karm; Xiwei Wu; Yun Yen; Gerd P Pfeifer
Methylation of homeobox genes is a frequent and early epigenetic event in breast cancer.
Breast cancer research : BCR 2009;11(1):R14.
2008: Selma Masri; Sheryl Phung; Xin Wang; Xiwei Wu; Yate-Ching Yuan; Lawrence D Wagman; Shiuan Chen
Genome-wide analysis of aromatase inhibitor-resistant, tamoxifen-resistant, and long-term estrogen-deprived cells reveals a role for estrogen receptor.
Cancer research 2008;68(12):4910-8.
2008: Feng Miao; Xiwei Wu; Lingxiao Zhang; Arthur D Riggs; Rama Natarajan
Histone methylation patterns are cell-type specific in human monocytes and lymphocytes and well maintained at core genes.
Journal of immunology (Baltimore, Md. : 1950) 2008;180(4):2264-9.
2008: Tibor Rauch; Xueyan Zhong; Xiwei Wu; Melody Wang; Kemp H Kernstine; Zunde Wang; Arthur D Riggs; Gerd P Pfeifer
High-resolution mapping of DNA hypermethylation and hypomethylation in lung cancer.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(1):252-7.
2008: Lynn S Adams; Sheryl Phung; Xiwei Wu; Lui Ki; Ki Lui
White button mushroom (Agaricus bisporus) exhibits antiproliferative and proapoptotic properties and inhibits prostate tumor growth in athymic mice.
Nutrition and cancer 2008;60(6):744-56.
2007: Shiuan Chen; Selma Masri; Yanyan Hong; Xin Wang; Sheryl Phung; Yate-Ching Yuan; Xiwei Wu
New experimental models for aromatase inhibitor resistance.
The Journal of steroid biochemistry and molecular biology 2007;106(1-5):8-15.
2007: Feng Miao; Xiwei Wu; Lingxiao Zhang; Yate-Ching Yuan; Arthur D Riggs; Rama Natarajan
Genome-wide analysis of histone lysine methylation variations caused by diabetic conditions in human monocytes.
The Journal of biological chemistry 2007;282(18):13854-63.
2007: Tibor Rauch; Zunde Wang; Xinmin Zhang; Xueyan Zhong; Xiwei Wu; Sean K Lau; Kemp H Kernstine; Arthur D Riggs; Gerd P Pfeifer
Homeobox gene methylation in lung cancer studied by genome-wide analysis with a microarray-based methylated CpG island recovery assay.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(13):5527-32.
2006: Shiuan Chen; Selma Masri; Xin Wang; Sheryl Phung; Yate-Ching Yuan; Xiwei Wu
What do we know about the mechanisms of aromatase inhibitor resistance?
The Journal of steroid biochemistry and molecular biology 2006;102(1-5):232-40.
2006: Tibor Rauch; Hongwei Li; Xiwei Wu; Gerd P Pfeifer
MIRA-assisted microarray analysis, a new technology for the determination of DNA methylation patterns, identifies frequent methylation of homeodomain-containing genes in lung cancer cells.
Cancer research 2006;66(16):7939-47.
2006: Xiwei Wu; T Gregory Dewey
From microarray to biological networks: Analysis of gene expression profiles.
Methods in molecular biology (Clifton, N.J.) 2006;316():35-48.
2005: Tracy Daniels; Jianying Zhang; Israel Gutierrez; Max L Elliot; Brian Yamada; Mary J Heeb; Shaun M Sheets; Xiwei Wu; Carlos A Casiano
Antinuclear autoantibodies in prostate cancer: immunity to LEDGF/p75, a survival protein highly expressed in prostate tumors and cleaved during apoptosis.
The Prostate 2005;62(1):14-26.
2003: Xiwei Wu; T Gregory Dewey
Cluster analysis of dynamic parameters of gene expression.
Journal of bioinformatics and computational biology 2003;1(3):447-58.
2002: Xiwei Wu; Tracy Daniels; Christine Molinaro; M B Lilly; Carlos A Casiano
Caspase cleavage of the nuclear autoantigen LEDGF/p75 abrogates its pro-survival function: implications for autoimmunity in atopic disorders.
Cell death and differentiation 2002;9(9):915-25.
2001: Xiwei Wu; Christine Molinaro; N Johnson; Carlos A Casiano
Secondary necrosis is a source of proteolytically modified forms of specific intracellular autoantigens: implications for systemic autoimmunity.
Arthritis and rheumatism 2001;44(11):2642-52.