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Antoon Akkermans

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Sergey R Konstantinov; Hauke Smidt; Antoon D L Akkermans; Luisa Casini; Paolo Trevisi; Maurizio Mazzoni; Sara De Filippi; Paolo Bosi; WILLEM DE VOS
Feeding of Lactobacillus sobrius reduces Escherichia coli F4 levels in the gut and promotes growth of infected piglets.
Vesela A Tzeneva; Hans G H J Heilig; Wilma Akkermans van Vliet; Antoon D L Akkermans; WILLEM DE VOS; Hauke Smidt
16S rRNA targeted DGGE fingerprinting of microbial communities.
Sergey R Konstantinov; Ajay Awati; Barbara A Williams; Bevis G Miller; Philip Jones; Christopher R Stokes; Antoon D L Akkermans; Hauke Smidt; WILLEM DE VOS
Post-natal development of the porcine microbiota composition and activities.

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All Publications

2008: Sergey R Konstantinov; Hauke Smidt; Antoon D L Akkermans; Luisa Casini; Paolo Trevisi; Maurizio Mazzoni; Sara De Filippi; Paolo Bosi; WILLEM DE VOS
Feeding of Lactobacillus sobrius reduces Escherichia coli F4 levels in the gut and promotes growth of infected piglets.
FEMS microbiology ecology 2008;66(3):599-607.
2008: Vesela A Tzeneva; Hans G H J Heilig; Wilma Akkermans van Vliet; Antoon D L Akkermans; WILLEM DE VOS; Hauke Smidt
16S rRNA targeted DGGE fingerprinting of microbial communities.
Methods in molecular biology (Clifton, N.J.) 2008;410():335-49.
2006: Sergey R Konstantinov; Ajay Awati; Barbara A Williams; Bevis G Miller; Philip Jones; Christopher R Stokes; Antoon D L Akkermans; Hauke Smidt; WILLEM DE VOS
Post-natal development of the porcine microbiota composition and activities.
Environmental microbiology 2006;8(7):1191-9.
2006: Sergey R Konstantinov; Elisa Poznanski; Susana Fuentes; Antoon D L Akkermans; Hauke Smidt; WILLEM DE VOS
Lactobacillus sobrius sp. nov., abundant in the intestine of weaning piglets.
International journal of systematic and evolutionary microbiology 2006;56(Pt 1):29-32.
2005: Kees Roest; Mahmut Altinbas; Paula L Paulo; Hans G H J Heilig; Antoon D L Akkermans; Hauke Smidt; WILLEM DE VOS; Alfons J M Stams
Enrichment and detection of microorganisms involved in direct and indirect methanogenesis from methanol in an anaerobic thermophilic bioreactor.
Microbial ecology 2005;50(3):440-6.
2005: Frank A M de Bok; Hermie J M Harmsen; Caroline M Plugge; Maaike C de Vries; Antoon D L Akkermans; WILLEM DE VOS; Alfons J M Stams
The first true obligately syntrophic propionate-oxidizing bacterium, Pelotomaculum schinkii sp. nov., co-cultured with Methanospirillum hungatei, and emended description of the genus Pelotomaculum.
International journal of systematic and evolutionary microbiology 2005;55(Pt 4):1697-703.
2005: Kees Roest; Hans G H J Heilig; Hauke Smidt; WILLEM DE VOS; Alfons J M Stams; Antoon D L Akkermans
Community analysis of a full-scale anaerobic bioreactor treating paper mill wastewater.
Systematic and applied microbiology 2005;28(2):175-85.
2004: J Arjan G M de Visser; Antoon D L Akkermans; Rolf F Hoekstra; WILLEM DE VOS
Insertion-sequence-mediated mutations isolated during adaptation to growth and starvation in Lactococcus lactis.
Genetics 2004;168(3):1145-57.
2004: Melanie W Kuiper; Bart A Wullings; Antoon D L Akkermans; Rijkelt R Beumer; Dick van der Kooij
Intracellular proliferation of Legionella pneumophila in Hartmannella vermiformis in aquatic biofilms grown on plasticized polyvinyl chloride.
Applied and environmental microbiology 2004;70(11):6826-33.
2004: Vesela A Tzeneva; Youguo Li; Andreas Felske; WILLEM DE VOS; Antoon D L Akkermans; Elaine E Vaughan; Hauke Smidt
Development and application of a selective PCR-denaturing gradient gel electrophoresis approach to detect a recently cultivated Bacillus group predominant in soil.
Applied and environmental microbiology 2004;70(10):5801-9.
2004: Sergey R Konstantinov; Ajay Awati; Hauke Smidt; Barbara A Williams; Antoon D L Akkermans; WILLEM DE VOS
Specific response of a novel and abundant Lactobacillus amylovorus-like phylotype to dietary prebiotics in the guts of weaning piglets.
Applied and environmental microbiology 2004;70(7):3821-30.
2004: Andreas Felske; Vesela A Tzeneva; Jeroen Heyrman; M A Langeveld; Antoon D L Akkermans; Paul De Vos
Isolation and biodiversity of hitherto undescribed soil bacteria related to Bacillus niacini.
Microbial ecology 2004;48(1):111-9.
2003: Christine F Favier; WILLEM DE VOS; Antoon D L Akkermans
Development of bacterial and bifidobacterial communities in feces of newborn babies.
Anaerobe 2003;9(5):219-29.
2003: Nora A Fitzsimons; Antoon D L Akkermans; WILLEM DE VOS; Elaine E Vaughan
Bacterial gene expression detected in human faeces by reverse transcription-PCR.
Journal of microbiological methods 2003;55(1):133-40.
2003: Detmer Sipkema; Hans G H J Heilig; Antoon D L Akkermans; Ronald Osinga; Johannes Tramper; René H Wijffels
Sponge-cell culture? A molecular identification method for sponge cells.
Marine biotechnology (New York, N.Y.) 2003;5(5):443-9.
2003: Wei-Yun Zhu; Barbara A Williams; Sergey R Konstantinov; Seerp Tamminga; WILLEM DE VOS; Antoon D L Akkermans
Analysis of 16S rDNA reveals bacterial shift during in vitro fermentation of fermentable carbohydrate using piglet faeces as inoculum.
Anaerobe 2003;9(4):175-80.
2003: Sergey R Konstantinov; Wei-Yun Zhu; Barbara A Williams; Seerp Tamminga; Willem M Vos; Antoon D L Akkermans
Effect of fermentable carbohydrates on piglet faecal bacterial communities as revealed by denaturing gradient gel electrophoresis analysis of 16S ribosomal DNA.
FEMS microbiology ecology 2003;43(2):225-35.
2003: Jiro Nakayama; Antoon D L Akkermans; WILLEM DE VOS
High-throughput PCR screening of genes for three-component regulatory system putatively involved in quorum sensing from low-G + C gram-positive bacteria.
Bioscience, biotechnology, and biochemistry 2003;67(3):480-9.
2003: Francisco J Cervantes; Tuan Duong-Dac; Kees Roest; Antoon D L Akkermans; Gatze Lettinga; Jim A Field
Enrichment and immobilization of quinone-respiring bacteria in anaerobic granular sludge.
Water science and technology : a journal of the International Association on Water Pollution Research 2003;48(6):9-16.
2003: Francisco J Cervantes; Tuan Duong-Dac; Anna E Ivanova; Kees Roest; Antoon D L Akkermans; Gatze Lettinga; Jim A Field
Selective enrichment of Geobacter sulfurreducens from anaerobic granular sludge with quinones as terminal electron acceptors.
Biotechnology letters 2003;25(1):39-45.
2003: M Alcina Pereira; Kees Roest; Alfons J M Stams; Antoon D L Akkermans; António L Amaral; Marie-Noëlle Pons; Eugénio C Ferreira; Manuel Mota; madalena santos alves
Image analysis, methanogenic activity measurements, and molecular biological techniques to monitor granular sludge from an EGSB reactor fed with oleic acid.
Water science and technology : a journal of the International Association on Water Pollution Research 2003;47(5):181-8.
2003: Erwin G Zoetendal; Caroline M Plugge; Antoon D L Akkermans; WILLEM DE VOS
Victivallis vadensis gen. nov., sp. nov., a sugar-fermenting anaerobe from human faeces.
International journal of systematic and evolutionary microbiology 2003;53(Pt 1):211-5.
2003: Hugo C Ramírez-Saad; Angela Sessitsch; Antoon D L Akkermans
Molecular diversity in the bacterial community and the fluorescent pseudomonads group in natural and chlorobenzoate-stressed peat-forest soil.
Microbiological research 2003;158(1):47-54.
2002: Kaouther Ben Amor; Pieter Breeuwer; Patrick Verbaarschot; Frans Rombouts; Antoon D L Akkermans; WILLEM DE VOS; Tjakko Abee
Multiparametric flow cytometry and cell sorting for the assessment of viable, injured, and dead bifidobacterium cells during bile salt stress.
Applied and environmental microbiology 2002;68(11):5209-16.
2002: Erwin G Zoetendal; Kaouther Ben-Amor; Hermie J M Harmsen; Frits Schut; Antoon D L Akkermans; WILLEM DE VOS
Quantification of uncultured Ruminococcus obeum-like bacteria in human fecal samples by fluorescent in situ hybridization and flow cytometry using 16S rRNA-targeted probes.
Applied and environmental microbiology 2002;68(9):4225-32.
2002: Maria Alcina Pereira; Kees Roest; Alfons J M Stams; Manuel Mota; Madalena Alves; Antoon D L Akkermans
Molecular monitoring of microbial diversity in expanded granular sludge bed (EGSB) reactors treating oleic acid.
FEMS microbiology ecology 2002;41(2):95-103.
2002: Mark H.J. Sturme; Michiel Kleerebezem; Jiro Nakayama; Antoon D L Akkermans; Elaine E Vaugha; WILLEM DE VOS
Cell to cell communication by autoinducing peptides in gram-positive bacteria.
Antonie van Leeuwenhoek 2002;81(1-4):233-43.
2002: Elaine E Vaughan; Maaike C de Vries; Erwin G Zoetendal; Kaouther Ben-Amor; Antoon D L Akkermans; WILLEM DE VOS
The intestinal LABs.
Antonie van Leeuwenhoek 2002;82(1-4):341-52.
2002: Erwin G Zoetendal; Atte von Wright; Terttu Vilpponen-Salmela; Kaouther Ben-Amor; Antoon D L Akkermans; WILLEM DE VOS
Mucosa-associated bacteria in the human gastrointestinal tract are uniformly distributed along the colon and differ from the community recovered from feces.
Applied and environmental microbiology 2002;68(7):3401-7.
2002: Cinzia L Randazzo; Sandra Torriani; Antoon D L Akkermans; WILLEM DE VOS; Elaine E Vaughan
Diversity, dynamics, and activity of bacterial communities during production of an artisanal Sicilian cheese as evaluated by 16S rRNA analysis.
Applied and environmental microbiology 2002;68(4):1882-92.
2002: Christine F Favier; Elaine E Vaughan; WILLEM DE VOS; Antoon D L Akkermans
Molecular monitoring of succession of bacterial communities in human neonates.
Applied and environmental microbiology 2002;68(1):219-26.
2002: Hans G H J Heilig; Erwin G Zoetendal; Elaine E Vaughan; Philippe Marteau; Antoon D L Akkermans; WILLEM DE VOS
Molecular diversity of Lactobacillus spp. and other lactic acid bacteria in the human intestine as determined by specific amplification of 16S ribosomal DNA.
Applied and environmental microbiology 2002;68(1):114-23.
2001: Erwin G Zoetendal; Kaouther Ben-Amor; Antoon D L Akkermans; Tjakko Abee; WILLEM DE VOS
DNA isolation protocols affect the detection limit of PCR approaches of bacteria in samples from the human gastrointestinal tract.
Systematic and applied microbiology 2001;24(3):405-10.
2001: Reetta M Satokari; Elaine E Vaughan; Antoon D L Akkermans; Maria Saarela; WILLEM DE VOS
Polymerase chain reaction and denaturing gradient gel electrophoresis monitoring of fecal bifidobacterium populations in a prebiotic and probiotic feeding trial.
Systematic and applied microbiology 2001;24(2):227-31.
2001: Reetta M Satokari; Elaine E Vaughan; Antoon D L Akkermans; Maria Saarela; WILLEM DE VOS
Bifidobacterial diversity in human feces detected by genus-specific PCR and denaturing gradient gel electrophoresis.
Applied and environmental microbiology 2001;67(2):504-13.
2000: Hugo C Ramírez-Saad; Angela Sessitsch; WILLEM DE VOS; Antoon D L Akkermans
Bacterial community changes and enrichment of Burkholderia-like bacteria induced by chlorinated benzoates in a peat-forest soil-microcosm.
Systematic and applied microbiology 2000;23(4):591-8.
2000: Andreas Felske; Arthur F W M Wolterink; R Van Lis; WILLEM DE VOS; Antoon D L Akkermans
Response of a soil bacterial community to grassland succession as monitored by 16S rRNA levels of the predominant ribotypes.
Applied and environmental microbiology 2000;66(9):3998-4003.
2000: Andreas Felske; WILLEM DE VOS; Antoon D L Akkermans
Spatial distribution of 16S rRNA levels from uncultured acidobacteria in soil.
Letters in applied microbiology 2000;31(2):118-22.
2000: Elaine E Vaughan; Frits Schut; Hans G H J Heilig; Erwin G Zoetendal; WILLEM DE VOS; Antoon D L Akkermans
A molecular view of the intestinal ecosystem.
Current issues in intestinal microbiology 2000;1(1):1-12.
1999: Andreas Felske; M Vancanneyt; K Kersters; Antoon D L Akkermans
Application of temperature-gradient gel electrophoresis in taxonomy of coryneform bacteria.
International journal of systematic bacteriology 1999;49 Pt 1():113-21.
1998: Andreas Felske; Antoon D L Akkermans; WILLEM DE VOS
In situ detection of an uncultured predominant bacillus in Dutch grassland soils.
Applied and environmental microbiology 1998;64(11):4588-90.
1998: Andreas Felske; Antoon D L Akkermans; WILLEM DE VOS
Quantification of 16S rRNAs in complex bacterial communities by multiple competitive reverse transcription-PCR in temperature gradient gel electrophoresis fingerprints.
Applied and environmental microbiology 1998;64(11):4581-7.
1998: Bart A Wullings; A R Van Beuningen; J D Janse; Antoon D L Akkermans
Detection of Ralstonia solanacearum, which causes brown rot of potato, by fluorescent in situ hybridization with 23S rRNA-targeted probes.
Applied and environmental microbiology 1998;64(11):4546-54.
1998: Hermie J M Harmsen; B L Van Kuijk; Caroline M Plugge; Antoon D L Akkermans; WILLEM DE VOS; Alfons J M Stams
Syntrophobacter fumaroxidans sp. nov., a syntrophic propionate-degrading sulfate-reducing bacterium.
International journal of systematic bacteriology 1998;48 Pt 4():1383-7.
1998: Erwin G Zoetendal; Antoon D L Akkermans; WILLEM DE VOS
Temperature gradient gel electrophoresis analysis of 16S rRNA from human fecal samples reveals stable and host-specific communities of active bacteria.
Applied and environmental microbiology 1998;64(10):3854-9.
1998: Andreas Felske; Antoon D L Akkermans
Prominent occurrence of ribosomes from an uncultured bacterium of the Verrucomicrobiales cluster in grassland soils.
Letters in applied microbiology 1998;26(3):219-23.
1998: Andreas Felske; Arthur F W M Wolterink; R Van Lis; Antoon D L Akkermans
Phylogeny of the main bacterial 16S rRNA sequences in Drentse A grassland soils (The Netherlands).
Applied and environmental microbiology 1998;64(3):871-9.
1997: D J Wolters; C Van Dijk; Erwin G Zoetendal; Antoon D L Akkermans
Phylogenetic characterization of ineffective Frankia in Alnus glutinosa (L.) Gaertn. nodules from wetland soil inoculants.
Molecular ecology 1997;6(10):971-81.
1997: Angela Sessitsch; Hugo C Ramírez-Saad; G Hardarson; Antoon D L Akkermans; WILLEM DE VOS
Classification of Austrian rhizobia and the Mexican isolate FL27 obtained from Phaseolus vulgaris L. as Rhizobium gallicum.
International journal of systematic bacteriology 1997;47(4):1097-101.
1997: Andreas Felske; Holger Rheims; Arthur F W M Wolterink; Erko Stackebrandt; Antoon D L Akkermans
Ribosome analysis reveals prominent activity of an uncultured member of the class Actinobacteria in grassland soils.
Microbiology (Reading, England) 1997;143 ( Pt 9)():2983-9.
1996: A Sessitsch; K J Wilson; Antoon D L Akkermans; WILLEM DE VOS
Simultaneous detection of different Rhizobium strains marked with either the Escherichia coli gusA gene or the Pyrococcus furiosus celB gene.
Applied and environmental microbiology 1996;62(11):4191-4.
1996: H J Harmsen; Antoon D L Akkermans; Alfons J M Stams; WILLEM DE VOS
Population dynamics of propionate-oxidizing bacteria under methanogenic and sulfidogenic conditions in anaerobic granular sludge.
Applied and environmental microbiology 1996;62(6):2163-8.
1996: H J Harmsen; H M Kengen; Antoon D L Akkermans; Alfons J M Stams; WILLEM DE VOS
Detection and localization of syntrophic propionate-oxidizing bacteria in granular sludge by in situ hybridization using 16S rRNA-based oligonucleotide probes.
Applied and environmental microbiology 1996;62(5):1656-63.
1995: K J Wilson; A Sessitsch; J C Corbo; K E Giller; Antoon D L Akkermans; R A Jefferson
beta-Glucuronidase (GUS) transposons for ecological and genetic studies of rhizobia and other gram-negative bacteria.
Microbiology (Reading, England) 1995;141 ( Pt 7)():1691-705.
1994: M S Mirza; S Hameed; Antoon D L Akkermans
Genetic diversity of Datisca cannabina-compatible Frankia strains as determined by sequence analysis of the PCR-amplified 16S rRNA gene.
Applied and environmental microbiology 1994;60(7):2371-6.
1994: M S Mirza; D Hahn; S V Dobritsa; Antoon D L Akkermans
Phylogenetic studies on uncultured Frankia populations in nodules of Datisca cannabina.
Canadian journal of microbiology 1994;40(4):313-8.
1993: M S Mirza; Jan Rademaker; J D Janse; Antoon D L Akkermans
Specific 16S ribosomal RNA targeted oligonucleotide probe against Clavibacter michiganensis subsp. sepedonicus.
Canadian journal of microbiology 1993;39(11):1029-34.
1993: H J Harmsen; B Wullings; Antoon D L Akkermans; W Ludwig; Alfons J M Stams
Phylogenetic analysis of Syntrophobacter wolinii reveals a relationship with sulfate-reducing bacteria.
Archives of microbiology 1993;160(3):238-40.