Preview
Sign-in for full Details 
Sign-in free and Explore the Exciting World of BiomedExperts:
- Over 1.500.000 Profiles
- More than 1.800 Organizations worldwide
- State of the Art Network Visualizations
- Manage your own Profile
- Locate Experts in your Country/Region
- Locate Experts in your 1. and 2. Level Network
- Connect to Experts Worldwide
NetworkView
Michael Galperin
This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers
together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles
free of charge to researchers worldwide.
Research Profile (preview)
Genes & Molecular Sequences
Concepts & Ideas
Living Beings
Chemicals & Drugs
Occupations
Phenomena
Physiology
Procedures
Sign-in to see full Profile
Network (preview)
33
Koonin, Eugene
13
Makarova, Kira
10
Mulkidjanian, Armen
8
Wolf, Yuri
6
Rigden, Daniel
6
Jedrzejas, Mark
5
Nikolskaya, Anastasia
5
Aravind, L
5
Tatusov, Roman
4
Rigden, Daniel
4
Moroz, Olga
4
Dibrov, Pavel
4
Natale, Darren
4
Alam, Maqsudul
3
Kolker, Eugene
Sign-in to see all Coauthors
Publications
Sign-in to see all Publications
Sign in free and see...
Visualized networks:
See your personal network in
sophisticated graphical views
GeoTargeted Searches:
Locate experts around the world
and connect with global collaborators
Research Profiles:
See the visualized research activity
of experts around the globe
Sign-in to see more
Geonetwork of Michael Galperin (preview)
Cities where this author has publications
Cities where co-authors of this author have publications
Sign-in to see more
All Publications
-
2009: Wan Xuehua; Tuckerman Jason R; Saito Jennifer A; Freitas Tracey Allen K; Newhouse James S; Denery Judith R; Galperin Michael Y; Gonzalez Gonzalo; Gilles-Gonzalez Marie-Alda; Alam Maqsudul
Globins synthesize the second messenger bis-(3'-5')-cyclic diguanosine monophosphate in bacteria.
Journal of molecular biology 2009;388(2):262-70.
-
2009: Mulkidjanian Armen Y; Galperin Michael Y; Koonin Eugene V
Co-evolution of primordial membranes and membrane proteins.
Trends in biochemical sciences 2009;34(4):206-15.
-
2009: Jenal Urs; Galperin Michael Y
Single domain response regulators: molecular switches with emerging roles in cell organization and dynamics.
Current opinion in microbiology 2009;12(2):152-60.
-
2009: de Lorenzo Víctor; Galperin Michael
Microbial systems biology: bottom up and top down.
FEMS microbiology reviews 2009;33(1):1-2.
-
2009: Galperin Michael Y; Cochrane Guy R
Nucleic Acids Research annual Database Issue and the NAR online Molecular Biology Database Collection in 2009.
Nucleic acids research 2009;37(Database issue):D1-4.
-
2009: Mulkidjanian Armen Y; Galperin Michael Y
On the origin of life in the Zinc world. 2. Validation of the hypothesis on the photosynthesizing zinc sulfide edifices as cradles of life on Earth.
Biology direct 2009;4():27.
-
2008: Galperin Michael Y
Sorting out the mix in microbial genomics.
Environmental microbiology 2008;10(12):3187-92.
-
2008: Galperin Michael Y
The quest for biofuels fuels genome sequencing.
Environmental microbiology 2008;10(10):2471-5.
-
2008: Galperin Michael Y
New feel for new phyla.
Environmental microbiology 2008;10(8):1927-33.
-
2008: Rigden Daniel J; Galperin Michael Y
Sequence analysis of GerM and SpoVS, uncharacterized bacterial 'sporulation' proteins with widespread phylogenetic distribution.
Bioinformatics (Oxford, England) 2008;24(16):1793-7.
-
2008: Mulkidjanian Armen Y; Dibrov Pavel; Galperin Michael Y
The past and present of sodium energetics: may the sodium-motive force be with you.
Biochimica et biophysica acta 2008;1777(7-8):985-92.
-
2008: Galperin Michael Y
Genomes of model organisms: know thy tools.
Environmental microbiology 2008;10(6):1383-91.
-
2008: Galperin Michael Y
Telling bacteria: do not LytTR.
Structure (London, England : 1993) 2008;16(5):657-9.
-
2008: Galperin Michael Y
The dawn of synthetic genomics.
Environmental microbiology 2008;10(4):821-5.
-
2008: Galperin Michael Y
Social bacteria and asocial eukaryotes.
Environmental microbiology 2008;10(2):281-8.
-
2008: Galperin Michael Y
The Molecular Biology Database Collection: 2008 update.
Nucleic acids research 2008;36(Database issue):D2-4.
-
2008: Saw Jimmy H; Mountain Bruce W; Feng Lu; Omelchenko Marina V; Hou Shaobin; Saito Jennifer A; Stott Matthew B; Li Dan; Zhao Guang; Wu Junli; Galperin Michael Y; Koonin Eugene V; Makarova Kira S; Wolf Yuri I; Rigden Daniel J; Dunfield Peter F; Wang Lei; Alam Maqsudul
Encapsulated in silica: genome, proteome and physiology of the thermophilic bacterium Anoxybacillus flavithermus WK1.
Genome biology 2008;9(11):R161.
-
2008: Hou Shaobin; Makarova Kira S; Saw Jimmy H W; Senin Pavel; Ly Benjamin V; Zhou Zhemin; Ren Yan; Wang Jianmei; Galperin Michael Y; Omelchenko Marina V; Wolf Yuri I; Yutin Natalya; Koonin Eugene V; Stott Matthew B; Mountain Bruce W; Crowe Michelle A; Smirnova Angela V; Dunfield Peter F; Feng Lu; Wang Lei; Alam Maqsudul
Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia.
Biology direct 2008;3():26.
-
2008: Mulkidjanian Armen Y; Galperin Michael Y; Makarova Kira S; Wolf Yuri I; Koonin Eugene V
Evolutionary primacy of sodium bioenergetics.
Biology direct 2008;3():13.
-
2007: Galperin Michael Y
Some bacteria degrade explosives, others prefer boiling methanol.
Environmental microbiology 2007;9(12):2905-10.
-
2007: Mulkidjanian Armen Y; Makarova Kira S; Galperin Michael Y; Koonin Eugene V
Inventing the dynamo machine: the evolution of the F-type and V-type ATPases.
Nature reviews. Microbiology 2007;5(11):892-9.
-
2007: Galperin Michael Y
Dark matter in a deep-sea vent and in human mouth.
Environmental microbiology 2007;9(10):2385-91.
-
2007: Mulkidjanian Armen Y; Galperin Michael Y
Physico-chemical and evolutionary constraints for the formation and selection of first biopolymers: towards the consensus paradigm of the abiogenic origin of life.
Chemistry & biodiversity 2007;4(9):2003-15.
-
2007: Galperin Michael Y
Genomics against flatulence.
Environmental microbiology 2007;9(8):1869-77.
-
2007: Galperin Michael Y
Linear chromosomes in bacteria: no straight edge advantage?
Environmental microbiology 2007;9(6):1357-62.
-
2007: Galperin Michael Y
Mycobacterial genomes for all tastes: from BCG to biodegradation of naphtalene and pyrene.
Environmental microbiology 2007;9(4):839-45.
-
2007: Galperin Michael Y
Using archaeal genomics to fight global warming and clostridia to fight cancer.
Environmental microbiology 2007;9(2):279-86.
-
2007: Bumbaca Daniela; Littlejohn James E; Nayakanti Hannah; Lucas Alexander H; Rigden Daniel J; Galperin Michael Y; Jedrzejas Mark J
Genome-based identification and characterization of a putative mucin-binding protein from the surface of Streptococcus pneumoniae.
Proteins 2007;66(3):547-58.
-
2007: Galperin Michael Y
The Molecular Biology Database Collection: 2007 update.
Nucleic acids research 2007;35(Database issue):D3-4.
-
2007: D'Souza Mark; Glass Elizabeth M; Syed Mustafa H; Zhang Yi; Rodriguez Alexis; Maltsev Natalia; Galperin Michael Y
Sentra: a database of signal transduction proteins for comparative genome analysis.
Nucleic acids research 2007;35(Database issue):D271-3.
-
2007: Galperin Michael Y; Nikolskaya Anastasia N
Identification of sensory and signal-transducing domains in two-component signaling systems.
Methods in enzymology 2007;422():47-74.
-
2006: Galperin Michael Y
The fuzzy border between a cell and an organelle.
Environmental microbiology 2006;8(12):2062-7.
-
2006: Galperin Michael Y; Kolker Eugene
New metrics for comparative genomics.
Current opinion in biotechnology 2006;17(5):440-7.
-
2006: Galperin Michael Y
A square archaeon, the smallest eukaryote and the largest bacteria.
Environmental microbiology 2006;8(10):1683-7.
-
2006: Mulkidjanian Armen Y; Koonin Eugene V; Makarova Kira S; Mekhedov Sergey L; Sorokin Alexander; Wolf Yuri I; Dufresne Alexis; Partensky Frédéric; Burd Henry; Kaznadzey Denis; Haselkorn Robert; Galperin Michael Y
The cyanobacterial genome core and the origin of photosynthesis.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(35):13126-31.
-
2006: Galperin Michael Y
Sampling of microbial diversity by complete genomes.
Environmental microbiology 2006;8(8):1313-7.
-
2006: Galperin Michael Y
Structural classification of bacterial response regulators: diversity of output domains and domain combinations.
Journal of bacteriology 2006;188(12):4169-82.
-
2006: Galperin Michael Y
Genomes to aid in bioremediation of dry cleaning solvents, mothballs and more.
Environmental microbiology 2006;8(6):949-55.
-
2006: Makarova Kira S; Koonin Eugene V; Haselkorn Robert; Galperin Michael Y
Cyanobacterial response regulator PatA contains a conserved N-terminal domain (PATAN) with an alpha-helical insertion.
Bioinformatics (Oxford, England) 2006;22(11):1297-301.
-
2006: Galperin Michael Y
The minimal genome keeps growing.
Environmental microbiology 2006;8(4):569-73.
-
2006: Galperin Michael Y
Protecting sausages with bacteria instead of salt.
Environmental microbiology 2006;8(2):185-92.
-
2006: Galperin Michael Y
The Molecular Biology Database Collection: 2006 update.
Nucleic acids research 2006;34(Database issue):D3-5.
-
2006: Galperin Michael Y; Moroz Olga V; Wilson Keith S; Murzin Alexey G
House cleaning, a part of good housekeeping.
Molecular microbiology 2006;59(1):5-19.
-
2006: Amikam Dorit; Galperin Michael Y
PilZ domain is part of the bacterial c-di-GMP binding protein.
Bioinformatics (Oxford, England) 2006;22(1):3-6.
-
2005: Galperin Michael Y
More cool news from marine bacteria.
Environmental microbiology 2005;7(12):1864-7.
-
2005: Habibian Rahim; Dzioba Judith; Barrett Jeannie; Galperin Michael Y; Loewen Peter C; Dibrov Pavel
Functional analysis of conserved polar residues in Vc-NhaD, Na+/H+ antiporter of Vibrio cholerae.
The Journal of biological chemistry 2005;280(47):39637-43.
-
2005: Galperin Michael Y
The secret of being cool.
Environmental microbiology 2005;7(10):1499-504.
-
2005: Teplyakov Alexey; Obmolova Galina; Toedt John; Galperin Michael Y; Gilliland Gary L
Crystal structure of the bacterial YhcH protein indicates a role in sialic acid catabolism.
Journal of bacteriology 2005;187(16):5520-7.
-
2005: Römling Ute; Gomelsky Mark; Galperin Michael Y
C-di-GMP: the dawning of a novel bacterial signalling system.
Molecular microbiology 2005;57(3):629-39.
-
2005: Galperin Michael Y
To finish or not to finish?
Environmental microbiology 2005;7(8):1061-4.
-
2005: Galperin Michael Y
The vibrio that sheds light.
Environmental microbiology 2005;7(6):757-60.
-
2005: Galperin Michael Y
On the bottom of the deep blue sea.
Environmental microbiology 2005;7(4):453-8.
-
2005: Moroz Olga V; Murzin Alexey G; Makarova Kira S; Koonin Eugene V; Wilson Keith S; Galperin Michael Y
Dimeric dUTPases, HisE, and MazG belong to a new superfamily of all-alpha NTP pyrophosphohydrolases with potential "house-cleaning" functions.
Journal of molecular biology 2005;347(2):243-55.
-
2005: Kolker Eugene; Picone Alex F; Galperin Michael Y; Romine Margaret F; Higdon Roger; Makarova Kira S; Kolker Natali; Anderson Gordon A; Qiu Xiaoyun; Auberry Kenneth J; Babnigg Gyorgy; Beliaev Alex S; Edlefsen Paul; Elias Dwayne A; Gorby Yuri A; Holzman Ted; Klappenbach Joel A; Konstantinidis Konstantinos T; Land Miriam L; Lipton Mary S; McCue Lee-Ann; Monroe Matthew; Pasa-Tolic Ljiljana; Pinchuk Grigoriy; Purvine Samuel; Serres Margrethe H; Tsapin Sasha; Zakrajsek Brian A; Zhu Wenhong; Zhou Jizhong; Larimer Frank W; Lawrence Charles E; Riley Monica; Collart Frank R; Yates John R; Smith Richard D; Giometti Carol S; Nealson Kenneth H; Fredrickson James K; Tiedje James M
Global profiling of Shewanella oneidensis MR-1: expression of hypothetical genes and improved functional annotations.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(6):2099-104.
-
2005: Galperin Michael Y
Life is not defined just in base pairs.
Environmental microbiology 2005;7(2):149-52.
-
2005: Galperin Michael Y
The Molecular Biology Database Collection: 2005 update.
Nucleic acids research 2005;33(Database issue):D5-24.
-
2005: Galperin Michael Y
A census of membrane-bound and intracellular signal transduction proteins in bacteria: bacterial IQ, extroverts and introverts.
BMC microbiology 2005;5():35.
-
2004: Hou Shaobin; Saw Jimmy H; Lee Kit Shan; Freitas Tracey A; Belisle Claude; Kawarabayasi Yutaka; Donachie Stuart P; Pikina Alla; Galperin Michael Y; Koonin Eugene V; Makarova Kira S; Omelchenko Marina V; Sorokin Alexander; Wolf Yuri I; Li Qing X; Keum Young Soo; Campbell Sonia; Denery Judith; Aizawa Shin-Ichi; Shibata Satoshi; Malahoff Alexander; Alam Maqsudul
Genome sequence of the deep-sea gamma-proteobacterium Idiomarina loihiensis reveals amino acid fermentation as a source of carbon and energy.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(52):18036-41.
-
2004: Galperin Michael Y
Genomes back-to-back: when sequencing race is a good thing.
Environmental microbiology 2004;6(12):1205-9.
-
2004: Rigden Daniel J; Galperin Michael Y
The DxDxDG motif for calcium binding: multiple structural contexts and implications for evolution.
Journal of molecular biology 2004;343(4):971-84.
-
2004: Moroz Olga V; Harkiolaki Maria; Galperin Michael Y; Vagin Alexei A; González-Pacanowska Dolores; Wilson Keith S
The crystal structure of a complex of Campylobacter jejuni dUTPase with substrate analogue sheds light on the mechanism and suggests the "basic module" for dimeric d(C/U)TPases.
Journal of molecular biology 2004;342(5):1583-97.
-
2004: Galperin Michael Y
The bugs that came in from the cold.
Environmental microbiology 2004;6(10):1001-4.
-
2004: Galperin Michael Y
Looking at big brothers for clues.
Environmental microbiology 2004;6(8):767-8.
-
2004: Rigden Daniel J; Mello Luciane V; Galperin Michael Y
The PA14 domain, a conserved all-beta domain in bacterial toxins, enzymes, adhesins and signaling molecules.
Trends in biochemical sciences 2004;29(7):335-9.
-
2004: Galperin Michael Y; Baker Alan J M
From biofouling to bioremediation: the good, the bad and the vague.
Current opinion in biotechnology 2004;15(3):167-9.
-
2004: Galperin Michael Y
Bacterial signal transduction network in a genomic perspective.
Environmental microbiology 2004;6(6):552-67.
-
2004: Galperin Michael Y
Metagenomics: from acid mine to shining sea.
Environmental microbiology 2004;6(6):543-5.
-
2004: Galperin Michael Y
All bugs, big and small.
Environmental microbiology 2004;6(5):435-7.
-
2004: Galperin Michael Y
The Molecular Biology Database Collection: 2004 update.
Nucleic acids research 2004;32(Database issue):D3-22.
-
2004: Dibrov Pavel; Dibrov Elena; Pierce Grant N; Galperin Michael Y
Salt in the wound: a possible role of Na+ gradient in chlamydial infection.
Journal of molecular microbiology and biotechnology 2004;8(1):1-6.
-
2004: Bumbaca Daniela; Littlejohn James E; Nayakanti Hannah; Rigden Daniel J; Galperin Michael Y; Jedrzejas Mark J
Sequence analysis and characterization of a novel fibronectin-binding repeat domain from the surface of Streptococcus pneumoniae.
Omics : a journal of integrative biology 2004;8(4):341-56.
-
2004: Galperin Michael Y; Koonin Eugene V
'Conserved hypothetical' proteins: prioritization of targets for experimental study.
Nucleic acids research 2004;32(18):5452-63.
-
2004: Kolker Eugene; Makarova Kira S; Shabalina Svetlana; Picone Alex F; Purvine Samuel; Holzman Ted; Cherny Tim; Armbruster David; Munson Robert S; Kolesov Grigory; Frishman Dmitrij; Galperin Michael Y
Identification and functional analysis of 'hypothetical' genes expressed in Haemophilus influenzae.
Nucleic acids research 2004;32(8):2353-61.
-
2004: Raghunathan Anu; Price Nathan D; Galperin Michael Y; Makarova Kira S; Purvine Samuel; Picone Alex F; Cherny Tim; Xie Tao; Reilly Thomas J; Munson Robert; Tyler Ryan E; Akerley Brian J; Smith Arnold L; Palsson Bernhard O; Kolker Eugene
In Silico Metabolic Model and Protein Expression of Haemophilus influenzae Strain Rd KW20 in Rich Medium.
Omics : a journal of integrative biology 2004;8(1):25-41.
-
2003: Dufresne Alexis; Salanoubat Marcel; Partensky Frédéric; Artiguenave François; Axmann Ilka M; Barbe Valérie; Duprat Simone; Galperin Michael Y; Koonin Eugene V; Le Gall Florence; Makarova Kira S; Ostrowski Martin; Oztas Sophie; Robert Catherine; Rogozin Igor B; Scanlan David J; Tandeau de Marsac Nicole; Weissenbach Jean; Wincker Patrick; Wolf Yuri I; Hess Wolfgang R
Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(17):10020-5.
-
2003: Kolker Eugene; Purvine Samuel; Galperin Michael Y; Stolyar Serg; Goodlett David R; Nesvizhskii Alexey I; Keller Andrew; Xie Tao; Eng Jimmy K; Yi Eugene; Hood Leroy; Picone Alex F; Cherny Tim; Tjaden Brian C; Siegel Andrew F; Reilly Thomas J; Makarova Kira S; Palsson Bernhard O; Smith Arnold L
Initial proteome analysis of model microorganism Haemophilus influenzae strain Rd KW20.
Journal of bacteriology 2003;185(15):4593-602.
-
2003: Rigden Daniel J; Jedrzejas Mark J; Moroz Olga V; Galperin Michael Y
Structural diversity of calcium-binding proteins in bacteria: single-handed EF-hands?
Trends in microbiology 2003;11(7):295-7.
-
2003: Mulkidjanian Armen Y; Cherepanov Dmitry A; Galperin Michael Y
Survival of the fittest before the beginning of life: selection of the first oligonucleotide-like polymers by UV light.
BMC evolutionary biology 2003;3():12.
-
2003: Rigden Daniel J; Jedrzejas Mark J; Galperin Michael Y
Amidase domains from bacterial and phage autolysins define a family of gamma-D,L-glutamate-specific amidohydrolases.
Trends in biochemical sciences 2003;28(5):230-4.
-
2003: Rigden Daniel J; Jedrzejas Mark J; Galperin Michael Y
An extracellular calcium-binding domain in bacteria with a distant relationship to EF-hands.
FEMS microbiology letters 2003;221(1):103-10.
-
2003: Cohen Georges N; Barbe Valérie; Flament Didier; Galperin Michael; Heilig Roland; Lecompte Odile; Poch Olivier; Prieur Daniel; Quérellou Joël; Ripp Raymond; Thierry Jean-Claude; Van der Oost John; Weissenbach Jean; Zivanovic Yvan; Forterre Patrick
An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi.
Molecular microbiology 2003;47(6):1495-512.
-
2003: Mirkin Boris G; Fenner Trevor I; Galperin Michael Y; Koonin Eugene V
Algorithms for computing parsimonious evolutionary scenarios for genome evolution, the last universal common ancestor and dominance of horizontal gene transfer in the evolution of prokaryotes.
BMC evolutionary biology 2003;3():2.
-
2003: Dzioba Judith; Häse Claudia C; Gosink Khoosheh; Galperin Michael Y; Dibrov Pavel
Experimental verification of a sequence-based prediction: F(1)F(0)-type ATPase of Vibrio cholerae transports protons, not Na(+) ions.
Journal of bacteriology 2003;185(2):674-8.
-
2003: Zhulin Igor B; Nikolskaya Anastasia N; Galperin Michael Y
Common extracellular sensory domains in transmembrane receptors for diverse signal transduction pathways in bacteria and archaea.
Journal of bacteriology 2003;185(1):285-94.
-
2003: Jordan I King; Henze Katrin; Fedorova Natalie D; Koonin Eugene V; Galperin Michael Y
Phylogenomic analysis of the Giardia intestinalis transcarboxylase reveals multiple instances of domain fusion and fission in the evolution of biotin-dependent enzymes.
Journal of molecular microbiology and biotechnology 2003;5(3):172-89.
-
2003: Rigden Daniel J; Galperin Michael Y; Jedrzejas Mark J
Analysis of structure and function of putative surface-exposed proteins encoded in the Streptococcus pneumoniae genome: a bioinformatics-based approach to vaccine and drug design.
Critical reviews in biochemistry and molecular biology 2003;38(2):143-68.
-
2003: Nikolskaya Anastsia N; Mulkidjanian Armen Y; Beech Iwona B; Galperin Michael Y
MASE1 and MASE2: two novel integral membrane sensory domains.
Journal of molecular microbiology and biotechnology 2003;5(1):11-6.
-
2002: Rigden Daniel J; Mosolov Vladimir V; Galperin Michael Y
Sequence conservation in the chagasin family suggests a common trend in cysteine proteinase binding by unrelated protein inhibitors.
Protein science : a publication of the Protein Society 2002;11(8):1971-7.
-
2002: Nikolskaya Anastasia N; Galperin Michael Y
A novel type of conserved DNA-binding domain in the transcriptional regulators of the AlgR/AgrA/LytR family.
Nucleic acids research 2002;30(11):2453-9.
-
2001: Galperin M Y; Jedrzejas M J
Conserved core structure and active site residues in alkaline phosphatase superfamily enzymes.
Proteins 2001;45(4):318-24.
-
2001: Jordan I K; Natale D A; Koonin E V; Galperin M Y
Independent evolution of heavy metal-associated domains in copper chaperones and copper-transporting atpases.
Journal of molecular evolution 2001;53(6):622-33.
-
2001: Galperin M Y; Gaidenko T A; Mulkidjanian A Y; Nakano M; Price C W
MHYT, a new integral membrane sensor domain.
FEMS microbiology letters 2001;205(1):17-23.
-
2001: Galperin M Y; Nikolskaya A N; Koonin E V
Novel domains of the prokaryotic two-component signal transduction systems.
FEMS microbiology letters 2001;203(1):11-21.
-
2001: Häse C C; Fedorova N D; Galperin M Y; Dibrov P A
Sodium ion cycle in bacterial pathogens: evidence from cross-genome comparisons.
Microbiology and molecular biology reviews : MMBR 2001;65(3):353-70, table of contents.
-
2001: Tatusov R L; Natale D A; Garkavtsev I V; Tatusova T A; Shankavaram U T; Rao B S; Kiryutin B; Galperin M Y; Fedorova N D; Koonin E V
The COG database: new developments in phylogenetic classification of proteins from complete genomes.
Nucleic acids research 2001;29(1):22-8.
-
2001: Galperin M Y
Conserved 'hypothetical' proteins: new hints and new puzzles.
Comparative and functional genomics 2001;2(1):14-8.
-
2001: Galperin M Y; Koonin E V
Comparative genome analysis.
Methods of biochemical analysis 2001;43():359-92.
-
2000: Galperin M Y; Grishin N V
The synthetase domains of cobalamin biosynthesis amidotransferases cobB and cobQ belong to a new family of ATP-dependent amidoligases, related to dethiobiotin synthetase.
Proteins 2000;41(2):238-47.
-
2000: Jordan I K; Natale D A; Galperin M Y
Copper chaperones in bacteria: association with copper-transporting ATPases.
Trends in biochemical sciences 2000;25(10):480-1.
-
2000: Galperin M Y; Koonin E V
Who's your neighbor? New computational approaches for functional genomics.
Nature biotechnology 2000;18(6):609-13.
-
2000: Sánchez L B; Galperin M Y; Müller M
Acetyl-CoA synthetase from the amitochondriate eukaryote Giardia lamblia belongs to the newly recognized superfamily of acyl-CoA synthetases (Nucleoside diphosphate-forming).
The Journal of biological chemistry 2000;275(8):5794-803.
-
2000: Galperin M Y; Aravind L; Koonin E V
Aldolases of the DhnA family: a possible solution to the problem of pentose and hexose biosynthesis in archaea.
FEMS microbiology letters 2000;183(2):259-64.
-
2000: Tatusov R L; Galperin M Y; Natale D A; Koonin E V
The COG database: a tool for genome-scale analysis of protein functions and evolution.
Nucleic acids research 2000;28(1):33-6.
-
2000: Natale D A; Shankavaram U T; Galperin M Y; Wolf Y I; Aravind L; Koonin E V
Towards understanding the first genome sequence of a crenarchaeon by genome annotation using clusters of orthologous groups of proteins (COGs).
Genome biology 2000;1(5):RESEARCH0009.
-
2000: Natale D A; Galperin M Y; Tatusov R L; Koonin E V
Using the COG database to improve gene recognition in complete genomes.
Genetica 2000;108(1):9-17.
-
1999: Galperin M Y; Koonin E V
Searching for drug targets in microbial genomes.
Current opinion in biotechnology 1999;10(6):571-8.
-
1999: Galperin M Y; Natale D A; Aravind L; Koonin E V
A specialized version of the HD hydrolase domain implicated in signal transduction.
Journal of molecular microbiology and biotechnology 1999;1(2):303-5.
-
1999: Galperin M Y
Bioinformatics for all! ABRF meeting: Bioinformatics and Biomolecular Technologies: linking genomes, proteomes and biochemistry, Durham, North Carolina, USA, 19-22 March 1999. Association of Biomolecular Resource Facilities.
Trends in genetics : TIG 1999;15(7):257-8.
-
1999: Makarova K S; Aravind L; Galperin M Y; Grishin N V; Tatusov R L; Wolf Y I; Koonin E V
Comparative genomics of the Archaea (Euryarchaeota): evolution of conserved protein families, the stable core, and the variable shell.
Genome research 1999;9(7):608-28.
-
1999: Galperin M Y; Koonin E V
Functional genomics and enzyme evolution. Homologous and analogous enzymes encoded in microbial genomes.
Genetica 1999;106(1-2):159-70.
-
1998: Valenzuela J G; Charlab R; Galperin M Y; Ribeiro J M
Purification, cloning, and expression of an apyrase from the bed bug Cimex lectularius. A new type of nucleotide-binding enzyme.
The Journal of biological chemistry 1998;273(46):30583-90.
-
1998: Galperin M Y; Bairoch A; Koonin E V
A superfamily of metalloenzymes unifies phosphopentomutase and cofactor-independent phosphoglycerate mutase with alkaline phosphatases and sulfatases.
Protein science : a publication of the Protein Society 1998;7(8):1829-35.
-
1998: Galperin M Y; Brenner S E
Using metabolic pathway databases for functional annotation.
Trends in genetics : TIG 1998;14(8):332-3.
-
1998: Galperin M Y; Walker D R; Koonin E V
Analogous enzymes: independent inventions in enzyme evolution.
Genome research 1998;8(8):779-90.
-
1998: Koonin E V; Tatusov R L; Galperin M Y
Beyond complete genomes: from sequence to structure and function.
Current opinion in structural biology 1998;8(3):355-63.
-
1998: Aravind L; Galperin M Y; Koonin E V
The catalytic domain of the P-type ATPase has the haloacid dehalogenase fold.
Trends in biochemical sciences 1998;23(4):127-9.
-
1998: Galperin M Y; Koonin E V
Sources of systematic error in functional annotation of genomes: domain rearrangement, non-orthologous gene displacement and operon disruption.
In silico biology 1998;1(1):55-67.
-
1997: Koonin E V; Galperin M Y
Prokaryotic genomes: the emerging paradigm of genome-based microbiology.
Current opinion in genetics & development 1997;7(6):757-63.
-
1997: Galperin M Y; Koonin E V
A diverse superfamily of enzymes with ATP-dependent carboxylate-amine/thiol ligase activity.
Protein science : a publication of the Protein Society 1997;6(12):2639-43.
-
1997: Koonin E V; Mushegian A R; Galperin M Y; Walker D R
Comparison of archaeal and bacterial genomes: computer analysis of protein sequences predicts novel functions and suggests a chimeric origin for the archaea.
Molecular microbiology 1997;25(4):619-37.
-
1997: Galperin M Y; Koonin E V
Sequence analysis of an exceptionally conserved operon suggests enzymes for a new link between histidine and purine biosynthesis.
Molecular microbiology 1997;24(2):443-5.
-
1995: Galperin M Y; Lassiter M; Ma Y; Taylor K G; Doyle R J
Chemiluminescent detection of dextran bound to streptococcal glucan-binding lectin.
Analytical biochemistry 1995;225(1):185-7.
-
1992: Lü-Lü; Singh J S; Galperin M Y; Drake D; Taylor K G; Doyle R J
Chelating agents inhibit activity and prevent expression of streptococcal glucan-binding lectins.
Infection and immunity 1992;60(9):3807-13.
Sign-in to see more
