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Claire Fraser-Liggett

Research Profile

Genes & Molecular Sequences

Concepts & Ideas

Procedures

Sequence Analysis, DNA

Chemicals & Drugs

Occupations

Genomics

Phenomena

Anatomy

Bacterial Chromosomes

Physiology

Recombination, Genetic

Co-author Network

Publications

TOP 3
Emiley A Eloe-Fadrosh; Elliott F Drabek; Monica A McArthur; David Rasko; Anna M Seekatz; Marcelo B Sztein; Claire M Fraser-Liggett
Impact of oral typhoid vaccination on the human gut microbiota and correlations with s. Typhi-specific immunological responses.
Fredrik Bäckhed; Claire M Fraser-Liggett; Yehuda Ringel; Mary Ellen Sanders; R Balfour Sartor; Philip M Sherman; James Versalovic; Vincent Young; B Brett Finlay
Defining a healthy human gut microbiome: current concepts, future directions, and clinical applications.
Hervé Tettelin; Patricia Conville; Sean C Daugherty; Claire M Fraser-Liggett; Erin Hine; Steven M Holland; Kenneth N Olivier; David R Riley; Lisa Sadzewicz; Elizabeth P Sampaio; Naomi A Sengamalay; Kent Shefchek; Qi Su; Luke J Tallon; Adrian M Zelazny
Genomic insights into the emerging human pathogen Mycobacterium massiliense.

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All Publications

2013: Emiley A Eloe-Fadrosh; Elliott F Drabek; Monica A McArthur; David Rasko; Anna M Seekatz; Marcelo B Sztein; Claire M Fraser-Liggett
Impact of oral typhoid vaccination on the human gut microbiota and correlations with s. Typhi-specific immunological responses.
PloS one 2013;8(4):e62026.
2012: Fredrik Bäckhed; Claire M Fraser-Liggett; Yehuda Ringel; Mary Ellen Sanders; R Balfour Sartor; Philip M Sherman; James Versalovic; Vincent Young; B Brett Finlay
Defining a healthy human gut microbiome: current concepts, future directions, and clinical applications.
Cell host & microbe 2012;12(5):611-22.
2012: Hervé Tettelin; Patricia Conville; Sean C Daugherty; Claire M Fraser-Liggett; Erin Hine; Steven M Holland; Kenneth N Olivier; David R Riley; Lisa Sadzewicz; Elizabeth P Sampaio; Naomi A Sengamalay; Kent Shefchek; Qi Su; Luke J Tallon; Adrian M Zelazny
Genomic insights into the emerging human pathogen Mycobacterium massiliense.
Journal of bacteriology 2012;194(19):5450.
2012: Nur A Hasan; Erin Hine; M M Hoq; Anwar Huq; Huai Li; Joseph B Prosper; Jacques Ravel; Qi Su; Luke J Tallon; Elisa Taviani; Munirul Alam; Thomas A Cebula; Arlene Chen; Seon Young Choi; Philip W Clark; Alejandro Cravioto; Mark Eppinger; Claire M Fraser-Liggett; Keziah Furth; Bradd J Haley; Rita R Colwell
Genomic diversity of 2010 Haitian cholera outbreak strains.
Proceedings of the National Academy of Sciences of the United States of America 2012;109(29):E2010-7.
2012: Tracy H Hazen; Shannon D Manning; Carolyn R Morris; Julia C Redman; Jason W Sahl; Naomi A Sengamalay; Hans Steinsland; Beth Whittam; Thomas S Whittam; Marcus Chibucos; Sean C Daugherty; Claire M Fraser-Liggett; David Rasko
Draft genome sequences of the diarrheagenic Escherichia coli collection.
Journal of bacteriology 2012;194(11):3026-7.
2012: Kenneth I Berns; Arturo Casadevall; Murray L Cohen; Susan A Ehrlich; Lynn W Enquist; J Patrick Fitch; David R Franz; Claire M Fraser-Liggett; Christine M Grant; Michael J Imperiale; Joseph Kanabrocki; Paul S Keim; Stanley M Lemon; Stuart B Levy; John R Lumpkin; Jeffery F Miller; Randall Murch; Mark E Nance; Michael T Osterholm; David A Relman; James A Roth; Anne K Vidaver
Public health and biosecurity. Adaptations of avian flu virus are a cause for concern.
Science (New York, N.Y.) 2012;335(6069):660-1.
2012: Kenneth I Berns; Arturo Casadevall; Murray L Cohen; Susan A Ehrlich; Lynn W Enquist; J Patrick Fitch; David R Franz; Claire M Fraser-Liggett; Christine M Grant; Michael J Imperiale; Joseph Kanabrocki; Paul S Keim; Stanley M Lemon; Stuart B Levy; John R Lumpkin; Jeffery F Miller; Randall Murch; Mark E Nance; Michael T Osterholm; David A Relman; James A Roth; Anne K Vidaver
Policy: Adaptations of avian flu virus are a cause for concern.
Nature 2012;482(7384):153-4.
2012: Alison R Erickson; Claire M Fraser-Liggett; Jonas Halfvarson; Bernard Henrissat; Robert L Hettich; Regina Lamendella; Emmanuel F Mongodin; Chongle Pan; Jeroen Raes; Manesh Shah; Curt Tysk; Nathan C VerBerkmoes; Brandi L Cantarel; Youssef Darzi; Janet K Jansson
Integrated metagenomics/metaproteomics reveals human host-microbiota signatures of Crohn's disease.
PloS one 2012;7(11):e49138.
2012: Susan R Steyert; Louise D Teel; Claire M Fraser-Liggett; Jason W Sahl; Flemming Scheutz; David Rasko
Comparative genomics and stx phage characterization of LEE-negative Shiga toxin-producing Escherichia coli.
Frontiers in cellular and infection microbiology 2012;2():133.
2012: Margaret L Zupancic; Brandi L Cantarel; Shana Cirimotich; Elliott F Drabek; Richard B Horenstein; Cheron Jones; Rob Knight; Daniel Knights; Zhenqiu Liu; Braxton D Mitchell; Emmanuel F Mongodin; Kathleen A Ryan; Alan R Shuldiner; Soren Snitker; Nanette I Steinle; William A Walters; Claire M Fraser-Liggett
Analysis of the gut microbiota in the old order Amish and its relation to the metabolic syndrome.
PloS one 2012;7(8):e43052.
2012: William Wl Hsiao; Cheron Jones; Kevin L Li; Zhenqiu Liu; Claire M Fraser-Liggett; Ashraf Fouad
Microbial transformation from normal oral microbiota to acute endodontic infections.
BMC genomics 2012;13():345.
2012: Sherwood Casjens; George I Dimitrov; John J Dunn; John K Aron; Sam Freeman; Eddie B Gilcrease; Rebecca A Halpin; Wai Mun Huang; Hoda M Khouri; Benjamin J Luft; Emmanuel F Mongodin; Wei-Gang Qiu; Diana Radune; Steven E Schutzer; Julia E Sosa; Levy C Vargas; Marija Vujadinovic; Janice F Weidman; Claire M Fraser-Liggett
Genome stability of Lyme disease spirochetes: comparative genomics of Borrelia burgdorferi plasmids.
PloS one 2012;7(3):e33280.
2012: Steven E Schutzer; Peter Kraiczy; Benjamin J Luft; Claire M Fraser-Liggett; Wei-Gang Qiu; John J Dunn; Emmanuel F Mongodin; Sherwood R Casjens
Whole-genome sequences of Borrelia bissettii, Borrelia valaisiana, and Borrelia spielmanii.
Journal of bacteriology 2012;194(2):545-6.
2012: Susan G Dorsey; Lino Tessarollo; Carmen C Leitch; Colleen Barrick; Cynthia L Renn; Sandra Ott; Luke J Tallon; Claire M Fraser-Liggett; Elizabeth Vernon-Pitts; Richard M Lovering; Abhishek Pratap; Ryan M Wyatt; Kevin Voelker; Kevan Shokat; Gianluca Fulgenzi; Lisa DeShong Sadzewicz; Robert Talmadge; Naomi Sengamalay; Kristie M Jones; Jodi Becker; Brandon K Harvey; Xinyue Liu; Rita J Balice-Gordon; Chao Zhang; Christopher Ward
Genetic deletion of trkB.T1 increases neuromuscular function.
American journal of physiology. Cell physiology 2012;302(1):C141-53.
2011: Sherwood Casjens; John J Dunn; Claire M Fraser-Liggett; Benjamin J Luft; Emmanuel F Mongodin; Wei-Gang Qiu; Steven E Schutzer
Whole-genome sequences of two Borrelia afzelii and two Borrelia garinii Lyme disease agent isolates.
Journal of bacteriology 2011;193(24):6995-6.
2011: Natalia Shulzhenko; Michael Yao; Michele Battle; Claire M Fraser-Liggett; Oksana Gavrilova; William Hsiao; Andrew J Macpherson; Lloyd Mayer; Kathy D McCoy; Andrey Morgun; Marlene Orandle; Polly Matzinger
Crosstalk between B lymphocytes, microbiota and the intestinal epithelium governs immunity versus metabolism in the gut.
Nature medicine 2011;17(12):1585-93.
2011: Zhenqiu Liu; William Hsiao; Brandi L Cantarel; Elliott Franco Drábek; Claire M Fraser-Liggett
Sparse distance-based learning for simultaneous multiclass classification and feature selection of metagenomic data.
Bioinformatics (Oxford, England) 2011;27(23):3242-9.
2011: James Haven; Yozen Hernandez; Benjamin J Luft; Emmanuel F Mongodin; Pedro Pagan; Sherwood R Casjens; Claire M Fraser-Liggett; Steven E Schutzer; Levy C Vargas; Vincent Xue; Wei-Gang Qiu
Pervasive recombination and sympatric genome diversification driven by frequency-dependent selection in Borrelia burgdorferi, the Lyme disease bacterium.
Genetics 2011;189(3):951-66.
2011: David Rasko; Patricia L Worsham; Terry G Abshire; Scott T Stanley; Jason D Bannan; Mark R Wilson; Richard J Langham; R Scott Decker; Lingxia Jiang; Timothy D Read; Adam M Phillippy; Steven L Salzberg; Mihai Pop; Matthew N Van Ert; Leo J Kenefic; Paul Keim; Claire M Fraser-Liggett; Jacques Ravel
Bacillus anthracis comparative genome analysis in support of the Amerithrax investigation.
Proceedings of the National Academy of Sciences of the United States of America 2011;108(12):5027-32.
2011: Sherwood Casjens; Claire M Fraser-Liggett; Emmanuel F Mongodin; Wei-Gang Qiu; John J Dunn; Benjamin J Luft; Steven E Schutzer
Whole genome sequence of an unusual Borrelia burgdorferi sensu lato isolate.
Journal of bacteriology 2011;193(6):1489-90.
2011: Steven E Schutzer; Claire M Fraser-Liggett; Sherwood R Casjens; Wei-Gang Qiu; John J Dunn; Emmanuel F Mongodin; Benjamin J Luft
Whole-genome sequences of thirteen isolates of Borrelia burgdorferi.
Journal of bacteriology 2011;193(4):1018-20.
2011: Brandi L Cantarel; Patricia A Carey; Alison R Erickson; Brian K Erickson; Claire M Fraser-Liggett; Janet K Jansson; Emmanuel F Mongodin; Chongle Pan; Manesh Shah; Nathan C VerBerkmoes; Robert L Hettich
Strategies for metagenomic-guided whole-community proteomics of complex microbial environments.
PloS one 2011;6(11):e27173.
2010: Peter Arensburger; Karine Megy; Robert Waterhouse; Jenica Abrudan; Paolo Amedeo; Beatriz Antelo; Lyric Bartholomay; Shelby Bidwell; Elisabet Caler; Francisco Camara; Corey L Campbell; Kathryn S Campbell; Claudio Casola; Marta T Castro; Ishwar Chandramouliswaran; Sinéad B Chapman; Scott Christley; Javier Costas; Eric Eisenstadt; Cedric Feschotte; Claire M Fraser-Liggett; Roderic Guigo; Brian Haas; Martin Hammond; Bill S Hansson; Janet Hemingway; Sharon R Hill; Clint Howarth; Rickard Ignell; Ryan C Kennedy; Chinnappa D Kodira; Neil F Lobo; Chunhong Mao; George Mayhew; Kristin Michel; Akio Mori; Nannan Liu; Horacio Naveira; Vishvanath Nene; Nam Nguyen; Matthew D Pearson; Ellen J Pritham; Daniela Puiu; Yumin Qi; Hilary Ranson; Jose M C Ribeiro; Hugh M Roberston; David W Severson; Martin Shumway; Mario Stanke; Robert L Strausberg; Cheng Sun; Granger Sutton; Zhijian Jake Tu; Jose Manuel C Tubio; Maria F Unger; Dana L Vanlandingham; Albert J Vilella; Owen R White; Jared R White; Charles S Wondji; Jennifer Wortman; Evgeny M Zdobnov; Bruce Birren; Bruce M Christensen; Frank H Collins; Anthony Cornel; George Dimopoulos; Linda I Hannick; Stephen Higgs; Gregory C Lanzaro; Daniel Lawson; Norman H Lee; Marc A T Muskavitch; Alexander S Raikhel; Peter W Atkinson
Sequencing of Culex quinquefasciatus establishes a platform for mosquito comparative genomics.
Science (New York, N.Y.) 2010;330(6000):86-8.
2010: Agnes P Chan; Jonathan Crabtree; Qi Zhao; Hernan Lorenzi; Joshua Orvis; Daniela Puiu; Admasu Melake-Berhan; Kristine M Jones; Julia Redman; Grace Chen; Edgar B Cahoon; Melaku Gedil; Mario Stanke; Brian J Haas; Jennifer Wortman; Claire M Fraser-Liggett; Jacques Ravel; Pablo D Rabinowicz
Draft genome sequence of the oilseed species Ricinus communis.
Nature biotechnology 2010;28(9):951-6.
2010: L Li; W W L Hsiao; Renu Nandakumar; S M Barbuto; Emmanuel F Mongodin; B J Paster; Claire M Fraser-Liggett; Ashraf Fouad
Analyzing endodontic infections by deep coverage pyrosequencing.
Journal of dental research 2010;89(9):980-4.
2010: Elisabeth M Bik; Clara Davis Long; Gary C Armitage; Peter Loomer; Joanne Emerson; Emmanuel F Mongodin; Karen E Nelson; Steven R Gill; Claire M Fraser-Liggett; David A Relman
Bacterial diversity in the oral cavity of 10 healthy individuals.
The ISME journal 2010;4(8):962-74.
2009: Ewa Wywial; James Haven; Sherwood Casjens; Yozen A Hernandez; Shaneen Singh; Emmanuel F Mongodin; Claire M Fraser-Liggett; Benjamin J Luft; Steven E Schutzer; Wei-Gang Qiu
Fast, adaptive evolution at a bacterial host-resistance locus: the PFam54 gene array in Borrelia burgdorferi.
Gene 2009;445(1-2):26-37.
2009: Matthew Berriman; Brian J Haas; Philip T LoVerde; R Alan Wilson; Gary P Dillon; Gustavo C Cerqueira; Susan T Mashiyama; Bissan Al-Lazikani; Luiza F Andrade; Peter Ashton; Martin A Aslett; Daniella C Bartholomeu; Gaelle Blandin; Conor R Caffrey; Avril Coghlan; Richard Coulson; Tim A Day; Art Delcher; Ricardo DeMarco; Appolinaire Djikeng; Tina Eyre; John A Gamble; Elodie Ghedin; Yong Gu; Christiane Hertz-Fowler; Hirohisha Hirai; Yuriko Hirai; Robin Houston; Alasdair Ivens; David A Johnston; Daniela Lacerda; Camila D Macedo; Paul McVeigh; Zemin Ning; Guilherme Oliveira; John P Overington; Julian Parkhill; Mihaela Pertea; Raymond J Pierce; Anna V Protasio; Michael A Quail; Marie-Adèle Rajandream; Jane Rogers; Mohammed Sajid; Steven L Salzberg; Mario Stanke; Adrian R Tivey; Owen R White; David L Williams; Jennifer Wortman; Wenjie Wu; Mostafa Zamanian; Adhemar Zerlotini; Claire M Fraser-Liggett; Barclay G Barrell; Najib M El-Sayed
The genome of the blood fluke Schistosoma mansoni.
Nature 2009;460(7253):352-8.
2009: Ann C Palmenberg; David Spiro; Ryan Kuzmickas; Shiliang Wang; Appolinaire Djikeng; Jennifer A Rathe; Claire M Fraser-Liggett; Stephen B Liggett
Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution.
Science (New York, N.Y.) 2009;324(5923):55-9.
2009: William WL Hsiao; Claire M Fraser-Liggett
Human Microbiome Project--paving the way to a better understanding of ourselves and our microbes.
Drug discovery today 2009;14(7-8):331-3.
2009: Jacques Ravel; Lingxia Jiang; Scott T Stanley; Mark R Wilson; R Scott Decker; Timothy D Read; Patricia Worsham; Paul Keim; Steven L Salzberg; Claire M Fraser-Liggett; David Rasko
The complete genome sequence of Bacillus anthracis Ames "Ancestor".
Journal of bacteriology 2009;191(1):445-6.
2008: Jane M Carlton; John H Adams; Joana Carneiro Da Silva; Shelby L Bidwell; Hernan Lorenzi; Elisabet Caler; Jonathan Crabtree; Samuel V Angiuoli; Emilio F Merino; Paolo Amedeo; Qin Cheng; Richard M R Coulson; Brendan S Crabb; Hernando A Del Portillo; Kobby Essien; Tamara V Feldblyum; Carmen Fernandez-Becerra; Paul R Gilson; Amy H Gueye; Xiang Guo; Simon Kang'a; Taco W A Kooij; Michael Korsinczky; Esmeralda V-S Meyer; Vishvanath Nene; Ian Paulsen; Owen R White; Stuart A Ralph; Qinghu Ren; Tobias J Sargeant; Steven L Salzberg; Christian J Stoeckert; Steven A Sullivan; Marcio M Yamamoto; Stephen L Hoffman; Jennifer Wortman; Malcolm J Gardner; Mary R Galinski; John W Barnwell; Claire M Fraser-Liggett
Comparative genomics of the neglected human malaria parasite Plasmodium vivax.
Nature 2008;455(7214):757-63.
2008: Natalie Fedorova Abrams; Nora Khaldi; Vinita S Joardar; Rama Maiti; Paolo Amedeo; Michael J Anderson; Jonathan Crabtree; Joana Carneiro Da Silva; Jonathan H Badger; Ahmed Albarraq; Sam Angiuoli; Howard Bussey; Paul Bowyer; Peter J Cotty; Paul S Dyer; Amy Egan; Kevin Galens; Claire M Fraser-Liggett; Brian J Haas; Jason M Inman; Richard Kent; Sebastien Lemieux; Iran Malavazi; Joshua Orvis; Terry Roemer; Catherine M Ronning; Jaideep P Sundaram; Granger Sutton; Geoff Turner; J Craig Venter; Owen R White; Brett Whitty; Phil Youngman; Kenneth H Wolfe; Gustavo H Goldman; Jennifer Wortman; Bo Jiang; David W Denning; William C Nierman
Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus.
PLoS genetics 2008;4(4):e1000046.
2008: Steven E Schutzer; Linda R K Schlater; Catherine M Ronning; David DeShazer; Benjamin J Luft; John J Dunn; Jacques Ravel; Claire M Fraser-Liggett; William C Nierman
Characterization of clinically-attenuated Burkholderia mallei by whole genome sequencing: candidate strain for exclusion from Select Agent lists.
PloS one 2008;3(4):e2058.
2007: Peter J Turnbaugh; Ruth E Ley; Micah Hamady; Claire M Fraser-Liggett; Rob Knight; Jeffrey I Gordon
The human microbiome project.
Nature 2007;449(7164):804-10.
2007: Claire M Fraser-Liggett; Jean Weissenbach
Genomics.
Current opinion in microbiology 2007;10(5):479-80.
2007: Elodie Ghedin; Shiliang Wang; David Spiro; Elisabet Caler; Qi Zhao; Jonathan Crabtree; Jonathan E Allen; Arthur L Delcher; David B Guiliano; Diego Miranda-Saavedra; Samuel V Angiuoli; Todd Creasy; Paolo Amedeo; Brian Haas; Najib M El-Sayed; Jennifer Wortman; Tamara Feldblyum; Luke Tallon; Michael Schatz; Martin Shumway; Hean Koo; Steven L Salzberg; Seth Schobel; Mihaela Pertea; Mihai Pop; Owen R White; Geoffrey J Barton; Clotilde K S Carlow; Michael J Crawford; Jennifer Daub; Matthew W Dimmic; Chris F Estes; Jeremy M Foster; Mehul Ganatra; William F Gregory; Nicholas M Johnson; Jinming Jin; Richard Komuniecki; Ian F Korf; Sanjay Kumar; Sandra Laney; Benwen Li; Wen Li; Tim H Lindblom; Sara Lustigman; Dong Ma; Claude V Maina; David M A Martin; James P McCarter; Larry McReynolds; Makedonka Mitreva; Thomas B Nutman; John Parkinson; José M Peregrín-Alvarez; Catherine Poole; Qinghu Ren; Lori Saunders; Ann E Sluder; Katherine Smith; Mario Stanke; Thomas R Unnasch; Jenna Ware; Aguan D Wei; Gary Weil; Deryck J Williams; Yinhua Zhang; Steven A Williams; Claire M Fraser-Liggett; Barton Slatko; Mark L Blaxter; Alan L Scott
Draft genome of the filarial nematode parasite Brugia malayi.
Science (New York, N.Y.) 2007;317(5845):1756-60.
2007: Vishvanath Nene; Jennifer Wortman; Daniel Lawson; Brian Haas; Chinnappa Kodira; Zhijian Jake Tu; Brendan Loftus; Zhiyong Xi; Karyn Megy; Manfred Grabherr; Quinghu Ren; Evgeny M Zdobnov; Neil F Lobo; Kathryn S Campbell; Susan E Brown; Maria F Bonaldo; Jingsong Zhu; Steven P Sinkins; David G Hogenkamp; Paolo Amedeo; Peter Arensburger; Peter W Atkinson; Shelby Bidwell; Jim Biedler; Ewan Birney; Robert V Bruggner; Javier Costas; Monique R Coy; Jonathan Crabtree; Matt Crawford; Becky Debruyn; David Decaprio; Karin Eiglmeier; Eric Eisenstadt; Hamza El-Dorry; William M Gelbart; Suely L Gomes; Martin Hammond; Linda I Hannick; James R Hogan; Michael H Holmes; David Jaffe; J Spencer Johnston; Ryan C Kennedy; Hean Koo; Saul Kravitz; Evgenia Kriventseva; David Kulp; Kurt Labutti; Eduardo Lee; Song Li; Diane D Lovin; Chunhong Mao; Evan Mauceli; Carlos F M Menck; Jason R Miller; Philip Montgomery; Akio Mori; Ana L Nascimento; Horacio F Naveira; Chad Nusbaum; Sinéad O'leary; Joshua Orvis; Mihaela Pertea; Hadi Quesneville; Kyanne R Reidenbach; Yu-Hui Rogers; Charles W Roth; Jennifer R Schneider; Michael Schatz; Martin Shumway; Mario Stanke; Eric O Stinson; Jose M C Tubio; Janice P Vanzee; Sergio Verjovski-Almeida; Doreen Werner; Owen R White; Stefan Wyder; Qiandong Zeng; Qi Zhao; Yongmei Zhao; Catherine A Hill; Alexander S Raikhel; Marcelo B Soares; Dennis L Knudson; Norman H Lee; James Galagan; Steven L Salzberg; Ian Paulsen; George Dimopoulos; Frank H Collins; Bruce Birren; Claire M Fraser-Liggett; David Severson
Genome sequence of Aedes aegypti, a major arbovirus vector.
Science (New York, N.Y.) 2007;316(5832):1718-23.
2007: Jane M Carlton; Robert Hirt; Joana Carneiro Da Silva; Arthur L Delcher; Michael Schatz; Qi Zhao; Jennifer Wortman; Shelby L Bidwell; U Cecilia M Alsmark; Sébastien Besteiro; thomas sicheritz-ponten; Christophe Noel; Joel B Dacks; Peter G Foster; Cedric Simillion; Yves Van de Peer; Diego Miranda-Saavedra; Geoffrey J Barton; Gareth D Westrop; Sylke Müller; Daniele Dessi; Pier Luigi Fiori; Qinghu Ren; Ian Paulsen; Hanbang Zhang; Felix D Bastida-Corcuera; Augusto Simoes-Barbosa; Mark T Brown; Richard D Hayes; Mandira Mukherjee; Cheryl Y Okumura; Rachel Schneider; Alias J Smith; Stepanka Vanacova; Maria Villalvazo; Brian J Haas; Mihaela Pertea; Tamara V Feldblyum; Terry R Utterback; Chung-Li Shu; Kazutoyo Osoegawa; Pieter J de Jong; Ivan Hrdy; Lenka Horvathova; Zuzana Zubacova; Pavel Dolezal; Shehre-Banoo Malik; John M Logsdon; Katrin Henze; Arti Gupta; Ching C Wang; Rebecca L Dunne; Jacqueline A Upcroft; Peter Upcroft; Owen R White; Steven L Salzberg; Petrus Tang; Cheng-Hsun Chiu; Ying-Shiung Lee; T Martin Embley; Graham H Coombs; Jeremy C Mottram; Jan Tachezy; Claire M Fraser-Liggett; Patricia J Johnson
Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis.
Science (New York, N.Y.) 2007;315(5809):207-12.
2007: Matthew N Van Ert; W Ryan Easterday; Lynn Y Huynh; Richard T Okinaka; Martin E Hugh-Jones; Jacques Ravel; Shaylan Zanecki; Talima Pearson; Tatum S Simonson; Jana M U'Ren; Sergey M Kachur; Rebecca R Leadem-Dougherty; Shane D Rhoton; Guenevier Zinser; Jason Farlow; Pamala R Coker; Kimothy Smith; Bingxiang Wang; Leo Kenefic; Claire M Fraser-Liggett; David M Wagner; Paul Keim
Global genetic population structure of Bacillus anthracis.
PloS one 2007;2(5):e461.
2007: Matthew N Van Ert; W Ryan Easterday; Tatum S Simonson; Jana M U'Ren; Talima Pearson; Leo Kenefic; Joseph D Busch; Lynn Y Huynh; Meghan Dukerich; Carla B Trim; Jodi Beaudry; Amy Welty-Bernard; Timothy Read; Claire M Fraser-Liggett; Jacques Ravel; Paul Keim
Strain-specific single-nucleotide polymorphism assays for the Bacillus anthracis Ames strain.
Journal of clinical microbiology 2007;45(1):47-53.
2006: Steven R Gill; Mihai Pop; Robert T Deboy; Paul B Eckburg; Peter J Turnbaugh; Buck S Samuel; Jeffrey I Gordon; David A Relman; Claire M Fraser-Liggett; Karen E Nelson
Metagenomic analysis of the human distal gut microbiome.
Science (New York, N.Y.) 2006;312(5778):1355-9.
2006: Simon P Graham; Roger Pellé; Yoshikazu Honda; Duncan M Mwangi; Nyerhovwo J Tonukari; Mat Yamage; E Jane Glew; Etienne de Villiers; Trushar Shah; Richard Bishop; Evelyne Abuya; Elias Awino; James Gachanja; Anthony E Luyai; Ferdinand Mbwika; Anthony M Muthiani; David M Ndegwa; Moses Njahira; John K Nyanjui; Fredrick O Onono; Julius Osaso; Rosemary M Saya; Claude Wildmann; Claire M Fraser-Liggett; Ian Maudlin; Malcolm J Gardner; Subhash P Morzaria; Sheena Loosmore; Sarah C Gilbert; Jean-Christophe Audonnet; Pierre van der Bruggen; Vishvanath Nene; Evans L N Taracha
Theileria parva candidate vaccine antigens recognized by immune bovine cytotoxic T lymphocytes.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(9):3286-91.
2005: William C Nierman; Arnab Pain; Michael J Anderson; Jennifer Wortman; Heenam Stanley Kim; Javier Arroyo; Matthew Berriman; Keietsu Abe; David B Archer; Clara Bermejo; Joan Bennett; Paul Bowyer; Dan Chen; Matthew Collins; Richard Coulsen; Robert Davies; Paul S Dyer; Mark Farman; Natalie Fedorova Abrams; Natalie Fedorova; Tamara V Feldblyum; Reinhard Fischer; Nigel Fosker; Audrey Fraser; Jose L García; Maria J García; Arlette Goble; Gustavo H Goldman; Katsuya Gomi; Sam Griffith-Jones; Rhian Gwilliam; Brian Haas; Hubertus Haas; David Harris; H Horiuchi; Jiaqi Huang; Sean Humphray; Javier Jiménez; Nancy Keller; Hoda Khouri; Katsuhiko Kitamoto; Tetsuo Kobayashi; Sven Konzack; Resham Kulkarni; Toshitaka Kumagai; Anne Lafon; Anne Lafton; Jean-Paul Latgé; Weixi Li; Angela Lord; Charles Lu; William H Majoros; Gregory S May; Bruce L Miller; Yasmin Mohamoud; Maria Molina; Michel Monod; Isabelle Mouyna; Stephanie Mulligan; Lee Murphy; Susan O'Neil; Ian Paulsen; Miguel A Peñalva; Mihaela Pertea; Claire Price; Bethan L Pritchard; Michael A Quail; Ester Rabbinowitsch; Neil Rawlins; Marie-Adele Rajandream; Utz Reichard; Hubert Renauld; Geoff Robson; Santiago Rodriguez de Córdoba; Jose M Rodríguez-Peña; Catherine M Ronning; Simon Rutter; Steven L Salzberg; Miguel Sanchez; Juan C Sánchez-Ferrero; David Saunders; kathy seeger; Rob Squares; Steven Squares; Michio Takeuchi; Fredj Tekaia; Geoffrey Turner; Carlos Vazquez de Aldana; Janice Weidman; Owen R White; John Woodward; Jae-Hyuk Yu; Claire M Fraser-Liggett; James E Galagan; Kiyoshi Asai; Masayuki Machida; Neil Hall; Bart Barrell; David W Denning
Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus.
Nature 2005;438(7071):1151-6.
2005: Claire M Fraser-Liggett
Insights on biology and evolution from microbial genome sequencing.
Genome research 2005;15(12):1603-10.
2005: Stephen J O'Brien; Claire M Fraser-Liggett
Genomes and evolution: the power of comparative genomics.
Current opinion in genetics & development 2005;15(6):569-71.
2005: Elodie Ghedin; Naomi A Sengamalay; Martin Shumway; Jennifer Zaborsky; Tamara Feldblyum; Vik Subbu; David Spiro; Jeff Sitz; Hean Koo; Pavel Bolotov; Dmitry Dernovoy; Tatiana Tatusova; Yiming Bao; Kirsten St George; Jill Taylor; David Lipman; Claire M Fraser-Liggett; Jeffery Taubenberger; Steven L Salzberg
Large-scale sequencing of human influenza reveals the dynamic nature of viral genome evolution.
Nature 2005;437(7062):1162-6.
2005: Naomi Ward; Claire M Fraser-Liggett
How genomics has affected the concept of microbiology.
Current opinion in microbiology 2005;8(5):564-71.
2005: Hervé Tettelin; Vega Masignani; Michael J Cieslewicz; Claudio Donati; Duccio Medini; Naomi L Ward; Samuel V Angiuoli; Jonathan Crabtree; Amanda L Jones; A Scott Durkin; Robert T Deboy; Tanja M Davidsen; Marirosa Mora; Maria Scarselli; Immaculada Margarit y Ros; Jeremy D Peterson; Christopher R Hauser; Jaideep P Sundaram; William C Nelson; Ramana Madupu; Lauren M Brinkac; Robert J Dodson; Mary J Rosovitz; Steven A Sullivan; Sean C Daugherty; Daniel H Haft; Jeremy Selengut; Michelle G Giglio; Liwei Zhou; Nikhat Zafar; Hoda Khouri; Diana Radune; George Dimitrov; Kisha Watkins; Kevin J B O'Connor; Shannon Smith; Teresa R Utterback; Owen R White; Craig E Rubens; Guido Grandi; Lawrence C Madoff; Dennis L Kasper; John L Telford; Michael R Wessels; Rino Rappuoli; Claire M Fraser-Liggett
Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome".
Proceedings of the National Academy of Sciences of the United States of America 2005;102(39):13950-5.
2005: Vinita Joardar; Magdalen Lindeberg; Robert W Jackson; Jeremy Selengut; Robert Dodson; Lauren M Brinkac; Sean C Daugherty; Robert Deboy; A Scott Durkin; Michelle G Giglio; Ramana Madupu; William C Nelson; M J Rosovitz; Steven Sullivan; Jonathan Crabtree; Todd Creasy; Tanja Davidsen; Dan H Haft; Nikhat Zafar; Liwei Zhou; Rebecca Halpin; Tara Holley; Hoda Khouri; Tamara Feldblyum; Owen R White; Claire M Fraser-Liggett; Arun K Chatterjee; Sam Cartinhour; David J Schneider; John Mansfield; Alan Collmer; C Robin Buell
Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition.
Journal of bacteriology 2005;187(18):6488-98.
2005: C Robin Buell; Qiaoping Yuan; Shu Ouyang; Jia Liu; Wei Zhu; Aihui Wang; Rama Maiti; Brian Haas; Jennifer Wortman; Mihaela Pertea; Kristine M Jones; Mary Kim; Larry Overton; Tamara Tsitrin; Douglas Fadrosh; Jayati Bera; Bruce Weaver; Shaohua Jin; Shivani Johri; Matt Reardon; Kristen Webb; Jessica Hill; Kelly Moffat; Luke Tallon; Susan Van Aken; Matthew Lewis; Teresa Utterback; Tamara Feldblyum; Victoria L Zismann; Stacey Iobst; Joseph Hsiao; Aymeric R de Vazeille; Steven L Salzberg; Owen R White; Claire M Fraser-Liggett; Yeisoo Yu; HeyRan Kim; Teri Rambo; Jennifer Currie; Kristi Collura; Shelly Kernodle-Thompson; Fusheng Wei; Kudrna Kudrna; Jetty Siva S Ammiraju; Meizhong Luo; Jose Luis Goicoechea; Rod A Wing; David Henry; Ryan Oates; Michael Palmer; Gina Pries; Christopher Saski; Jessica Simmons; Carol Soderlund; William Nelson; Melissa de la Bastide; Lori Spiegel; Lidia Nascimento; Emily Huang; Raymond Preston; Theresa Zutavern; Lance Palmer; Andrew O'Shaughnessy; Sujit Dike; W Richard McCombie; Pat Minx; Holly Cordum; Richard Wilson; Weiwei Jin; Hye-Ran Lee; Jiming Jiang; Scott Jackson
Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species.
Genome research 2005;15(9):1284-91.
2005: Edward C Holmes; Elodie Ghedin; Naomi Miller; Jill Taylor; Yiming Bao; Kirsten St George; Bryan T Grenfell; Steven L Salzberg; Claire M Fraser-Liggett; David Lipman; Jeffery Taubenberger
Whole-genome analysis of human influenza A virus reveals multiple persistent lineages and reassortment among recent H3N2 viruses.
PLoS biology 2005;3(9):e300.
2005: Barbara A Methé; Karen E Nelson; Jody W Deming; Bahram Momen; Eugene Melamud; Xijun Zhang; John Moult; Ramana Madupu; William C Nelson; Robert J Dodson; Lauren M Brinkac; Sean C Daugherty; A Scott Durkin; Robert T Deboy; James F Kolonay; Steven A Sullivan; Liwei Zhou; Tanja M Davidsen; Martin Wu; Adrienne L Huston; Matthew Lewis; Bruce Weaver; Janice Weidman; Hoda Khouri; Teresa Utterback; Tamara Feldblyum; Claire M Fraser-Liggett
The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(31):10913-8.
2005: Christophe Hitte; Jennifer Madeoy; Ewen F Kirkness; Catherine Priat; Travis D Lorentzen; Fabrice Senger; Dan Thomas; Thomas Derrien; Christina Ramirez; Carol Scott; Gwenaelle Evanno; Barbara Pullar; Edouard Cadieu; Vinay Oza; Kristelle Lourgant; David B Jaffe; Sandrine Tacher; Stéphane Dréano; Nadia Berkova; Catherine André; Panos Deloukas; Claire M Fraser-Liggett; Kerstin Lindblad-Toh; Elaine A Ostrander; Francis Galibert
Facilitating genome navigation: survey sequencing and dense radiation-hybrid gene mapping.
Nature reviews. Genetics 2005;6(8):643-8.
2005: Matthew Berriman; Elodie Ghedin; Christiane Hertz-Fowler; Gaëlle Blandin; Hubert Renauld; Daniella C Bartholomeu; Nicola J Lennard; Elisabet Caler; Nancy E Hamlin; Brian Haas; Ulrike Böhme; Linda Hannick; Martin A Aslett; Joshua Shallom; Lucio Marcello; Lihua Hou; Bill Wickstead; U Cecilia M Alsmark; Claire Arrowsmith; Rebecca J Atkin; Andrew J Barron; Frederic Bringaud; Karen Brooks; Mark Carrington; Inna Cherevach; Tracey-Jane Chillingworth; Carol Churcher; Louise N Clark; Craig H Corton; Ann Cronin; Rob M Davies; Jonathon Doggett; Appolinaire Djikeng; Tamara Feldblyum; Mark Field; Audrey Fraser; Ian Goodhead; Zahra Hance; David Harper; Barbara R Harris; Heidi Hauser; Jessica Hostetler; Alasdair Ivens; Kay Jagels; David Johnson; Justin Johnson; Kristine Jones; Arnaud Kerhornou; Hean Koo; Natasha Larke; Scott M Landfear; Christopher Larkin; Vanessa Leech; Alexandra Line; Angela Lord; Annette Macleod; Paul J Mooney; Sharon Moule; David M A Martin; Gareth W Morgan; Karen Mungall; Halina Norbertczak; Doug Ormond; Grace Pai; Chris S Peacock; Jeremy Peterson; Michael A Quail; Ester Rabbinowitsch; Marie-Adele Rajandream; Chris Reitter; Steven L Salzberg; Mandy Sanders; Seth Schobel; Sarah Sharp; Mark Simmonds; Anjana J Simpson; Luke Tallon; C Michael R Turner; Andrew Tait; Adrian R Tivey; Susan Van Aken; Danielle Walker; David Wanless; Shiliang Wang; Brian White; Owen R White; Sally Whitehead; John Woodward; Jennifer Wortman; Mark D Adams; T Martin Embley; Keith Gull; Elisabetta Ullu; J David Barry; Alan H Fairlamb; Fred Opperdoes; Barclay G Barrell; John E Donelson; Neil Hall; Claire M Fraser-Liggett; Sara E Melville; Najib M El-Sayed
The genome of the African trypanosome Trypanosoma brucei.
Science (New York, N.Y.) 2005;309(5733):416-22.
2005: Najib M El-Sayed; Peter J Myler; Daniella C Bartholomeu; Daniel Nilsson; Gautam Aggarwal; Anh-Nhi Tran; Elodie Ghedin; Elizabeth A Worthey; Arthur L Delcher; Gaëlle Blandin; Scott Westenberger; Elisabet Caler; Gustavo Cerqueira; Carole Branche; Brian Haas; Atashi Anupama; Erik Arner; Lena Aslund; Philip Attipoe; Esteban Bontempi; Frédéric Bringaud; Peter Burton; Eithon Cadag; David A Campbell; Mark Carrington; Jonathan Crabtree; Hamid Darban; Jose Franco da Silveira; Pieter de Jong; Kimberly Edwards; Paul T Englund; Gholam Fazelina; Tamara Feldblyum; Marcela Ferella; Alberto Carlos Frasch; Keith Gull; David Horn; Lihua Hou; Yiting Huang; Ellen Kindlund; Michele Klingbeil; Sindy Kluge; Hean Koo; Daniela Lacerda; Mariano J Levin; Hernan Lorenzi; Tin Louie; Carlos Renato Machado; Richard McCulloch; Alan McKenna; Yumi Mizuno; Jeremy C Mottram; Siri Nelson; Stephen Ochaya; Kazutoyo Osoegawa; Grace Pai; Marilyn Parsons; Martin Pentony; Ulf Pettersson; Mihai Pop; Jose Ramirez; Joel Rinta; Laura Robertson; Steven L Salzberg; Daniel O Sanchez; Amber Seyler; Reuben Sharma; Jyoti Shetty; Anjana J Simpson; Ellen Sisk; Martti T Tammi; Rick L Tarleton; Santuza Teixeira; Susan Van Aken; Christy Vogt; Pauline N Ward; Bill Wickstead; Jennifer Wortman; Owen R White; Claire M Fraser-Liggett; Kenneth D Stuart; Björn Andersson
The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease.
Science (New York, N.Y.) 2005;309(5733):409-15.
2005: Emmanuel F Mongodin; Ioana R Hance; Robert T Deboy; Steven R Gill; Sean C Daugherty; Robert Huber; Claire M Fraser-Liggett; Karl Stetter; Karen E Nelson
Gene transfer and genome plasticity in Thermotoga maritima, a model hyperthermophilic species.
Journal of bacteriology 2005;187(14):4935-44.
2005: Domenico Maione; Immaculada Margarit; Cira Daniela Rinaudo; Vega Masignani; Marirosa Mora; Maria Scarselli; Hervé Tettelin; Cecilia Brettoni; Emilia T Iacobini; Roberto Rosini; Nunzio D'Agostino; Lisa Miorin; Scilla Buccato; Massimo Mariani; Giuliano Galli; Renzo Nogarotto; Vincenzo Nardi Dei; Filipo Vegni; Claire M Fraser-Liggett; Giuseppe Mancuso; Giuseppe Teti; Lawrence C Madoff; Lawrence C Paoletti; Rino Rappuoli; Dennis L Kasper; John L Telford; Vincenzo Nardi-Dei; Guido Grandi
Identification of a universal Group B streptococcus vaccine by multiple genome screen.
Science (New York, N.Y.) 2005;309(5731):148-50.
2005: Malcolm J Gardner; Richard Bishop; Trushar Shah; Etienne de Villiers; Jane M Carlton; Neil Hall; Qinghu Ren; Ian Paulsen; Arnab Pain; Matthew Berriman; Robert J M Wilson; Shigeharu Sato; Stuart A Ralph; David J Mann; Zikai Xiong; Shamira J Shallom; Janice Weidman; Lingxia Jiang; Jeffery Lynn; Bruce Weaver; Azadeh Shoaibi; Alexander R Domingo; Delia Wasawo; Jonathan Crabtree; Jennifer Wortman; Brian Haas; Samuel V Angiuoli; Todd H Creasy; Charles Lu; Bernard Suh; Joana Carneiro Da Silva; Teresa R Utterback; Tamara V Feldblyum; Mihaela Pertea; Jonathan Allen; William C Nierman; Evans L N Taracha; Steven L Salzberg; Owen R White; Henry A Fitzhugh; Subhash Morzaria; J Craig Venter; Claire M Fraser-Liggett; Vishvanath Nene
Genome sequence of Theileria parva, a bovine pathogen that transforms lymphocytes.
Science (New York, N.Y.) 2005;309(5731):134-7.
2005: Boonchai B Boonyaratanakornkit; Anjana J Simpson; Timothy A Whitehead; Claire M Fraser-Liggett; Najib M El-Sayed; Douglas S Clark
Transcriptional profiling of the hyperthermophilic methanarchaeon Methanococcus jannaschii in response to lethal heat and non-lethal cold shock.
Environmental microbiology 2005;7(6):789-97.
2005: Ruobing Wang; Myriam Arevalo-Herrera; Malcolm J Gardner; Anilza Bonelo; Jane M Carlton; Andres Gomez; Omaira Vera; Liliana Soto; Juana Vergara; Shelby L Bidwell; Alexander Domingo; Claire M Fraser-Liggett; Sócrates Herrera
Immune responses to Plasmodium vivax pre-erythrocytic stage antigens in naturally exposed Duffy-negative humans: a potential model for identification of liver-stage antigens.
European journal of immunology 2005;35(6):1859-68.
2005: Bruce Budowle; Steven E Schutzer; Michael S Ascher; Ronald M Atlas; James P Burans; Ranajit Chakraborty; John J Dunn; Claire M Fraser-Liggett; David R Franz; Terrance J Leighton; Stephen A Morse; Randall S Murch; Jacques Ravel; Daniel L Rock; Thomas R Slezak; Stephan P Velsko; Anne C Walsh; Ronald A Walters
Toward a system of microbial forensics: from sample collection to interpretation of evidence.
Applied and environmental microbiology 2005;71(5):2209-13.
2005: Steven R Gill; Derrick E Fouts; Gordon L Archer; Emmanuel F Mongodin; Robert T Deboy; Jacques Ravel; Ian Paulsen; James F Kolonay; Lauren M Brinkac; Maureen J Beanan; Robert J Dodson; Sean C Daugherty; Ramana Madupu; Samuel V Angiuoli; A Scott Durkin; Daniel H Haft; Jessica Vamathevan; Hoda Khouri; Teresa Utterback; Chris Lee; George Dimitrov; Lingxia Jiang; Haiying Qin; Janice Weidman; Kevin Tran; Kathy Kang; Ioana R Hance; Karen E Nelson; Claire M Fraser-Liggett
Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain.
Journal of bacteriology 2005;187(7):2426-38.
2005: Jacques Ravel; Claire M Fraser-Liggett
Genomics at the genus scale.
Trends in microbiology 2005;13(3):95-7.
2005: Brendan J Loftus; Eula Fung; Paola Roncaglia; Don Rowley; Paolo Amedeo; Dan Bruno; Jessica Vamathevan; Molly Miranda; Iain J Anderson; James A Fraser; Jonathan E Allen; Ian E Bosdet; Michael R Brent; Readman Chiu; Tamara L Doering; Maureen J Donlin; Cletus A D'Souza; Deborah S Fox; Viktoriya Grinberg; Jianmin Fu; Marilyn Fukushima; Brian J Haas; James C Huang; Guilhem Janbon; Steven J M Jones; Hean L Koo; Martin I Krzywinski; June K Kwon-Chung; Klaus B Lengeler; Rama Maiti; Marco A Marra; Robert E Marra; Carrie A Mathewson; Thomas G Mitchell; Mihaela Pertea; Florenta R Riggs; Steven L Salzberg; Jacqueline E Schein; Alla Shvartsbeyn; Heesun Shin; Martin Shumway; Charles A Specht; Bernard B Suh; Aaron Tenney; Terry R Utterback; Brian L Wickes; Jennifer Wortman; Natasja H Wye; James W Kronstad; Jennifer lodge; Joseph Heitman; Ronald W Davis; Claire M Fraser-Liggett; Richard W Hyman
The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans.
Science (New York, N.Y.) 2005;307(5713):1321-4.
2005: Brendan Loftus; Iain Anderson; Rob Davies; U Cecilia M Alsmark; John Samuelson; Paolo Amedeo; Paola Roncaglia; Matt Berriman; Robert Hirt; Barbara J Mann; Tomo Nozaki; Bernard Suh; Mihai Pop; Michael Duchene; John Ackers; Egbert Tannich; Matthias Leippe; Margit Hofer; Iris Bruchhaus; Ute Willhoeft; Alok Bhattacharya; Tracey Chillingworth; Carol Churcher; Zahra Hance; Barbara Harris; David Harris; Kay Jagels; Sharon Moule; Karen Mungall; Doug Ormond; Rob Squares; Sally Whitehead; Michael A Quail; Ester Rabbinowitsch; Halina Norbertczak; Claire Price; Zheng Wang; Nancy Guillén; Carol Gilchrist; Suzanne E Stroup; Sudha Bhattacharya; Anuradha Lohia; Peter G Foster; thomas sicheritz-ponten; Christian Weber; Upinder Singh; Chandrama Mukherjee; Najib M El-Sayed; William A Petri; C Graham Clark; T Martin Embley; Bart Barrell; Claire M Fraser-Liggett; Neil Hall
The genome of the protist parasite Entamoeba histolytica.
Nature 2005;433(7028):865-8.
2005: Elodie Ghedin; Claire M Fraser-Liggett
A virus with big ambitions.
Trends in microbiology 2005;13(2):56-7.
2005: Rekha Seshadri; Lorenz Adrian; Derrick E Fouts; Jonathan Eisen; Adam M Phillippy; Barbara A Methe; Naomi L Ward; William C Nelson; Robert T Deboy; Hoda Khouri; James F Kolonay; Robert J Dodson; Sean C Daugherty; Lauren M Brinkac; Steven A Sullivan; Ramana Madupu; Karen E Nelson; Katherine H Kang; Marjorie Impraim; Kevin Tran; Jeffrey M Robinson; Heather A Forberger; Claire M Fraser-Liggett; Stephen H Zinder; John F Heidelberg
Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes.
Science (New York, N.Y.) 2005;307(5706):105-8.
2005: Bruce Budowle; Martin D Johnson; Claire M Fraser-Liggett; Terrance J Leighton; Randall S Murch; Ranajit Chakraborty
Genetic analysis and attribution of microbial forensics evidence.
Critical reviews in microbiology 2005;31(4):233-54.
2005: Claire M Fraser-Liggett; Rino Rappuoli
Application of microbial genomic science to advanced therapeutics.
Annual review of medicine 2005;56():459-74.
2005: Derrick E Fouts; Emmanuel F Mongodin; Robert Mandrell; William G Miller; David Rasko; Jacques Ravel; Lauren M Brinkac; Robert T Deboy; Craig T Parker; Sean C Daugherty; Robert J Dodson; A Scott Durkin; Ramana Madupu; Steven A Sullivan; Jyoti U Shetty; Mobolanle A Ayodeji; Alla Shvartsbeyn; Michael C Schatz; Jonathan H Badger; Claire M Fraser-Liggett; Karen E Nelson
Major structural differences and novel potential virulence mechanisms from the genomes of multiple campylobacter species.
PLoS biology 2005;3(1):e15.
2004: Claire M Fraser-Liggett
An audience with Claire M. Fraser.
Nature reviews. Drug discovery 2004;3(12):992.
2004: Barbara A Methé; Karen E Nelson; Claire M Fraser-Liggett
It's a cold world out there (but the prospects are hot).
Trends in microbiology 2004;12(12):532-4.
2004: Claire M Fraser-Liggett
Insights into the evolution of phytopathogens.
Trends in microbiology 2004;12(11):482-3.
2004: Naomi Ward; Øivind Larsen; James Sakwa; Live Bruseth; Hoda Khouri; A Scott Durkin; George Dimitrov; Lingxia Jiang; David Scanlan; Katherine H Kang; Matt Lewis; Karen E Nelson; Barbara Methé; Martin Wu; John F Heidelberg; Ian Paulsen; Derrick Fouts; Jacques Ravel; Hervé Tettelin; Qinghu Ren; Tim Read; Robert T DeBoy; Rekha Seshadri; Steven L Salzberg; Harald B Jensen; Nils Kåre Birkeland; William C Nelson; Robert J Dodson; Svenn H Grindhaug; Ingeborg Holt; Ingvar Eidhammer; Inge Jonasen; Susan Vanaken; Terry Utterback; Tamara V Feldblyum; Claire M Fraser-Liggett; Johan R Lillehaug; Jonathan Eisen
Genomic insights into methanotrophy: the complete genome sequence of Methylococcus capsulatus (Bath).
PLoS biology 2004;2(10):e303.
2004: Barbara A Methé; Claire M Fraser-Liggett
Roll with the flow: microbial masters of redox chemistry.
Trends in microbiology 2004;12(10):439-41.
2004: Shaying Zhao; Jyoti U Shetty; Lihua Hou; Arthur Delcher; Baoli Zhu; Kazutoyo Osoegawa; Pieter de Jong; William C Nierman; Robert L Strausberg; Claire M Fraser-Liggett
Human, mouse, and rat genome large-scale rearrangements: stability versus speciation.
Genome research 2004;14(10A):1851-60.
2004: William C Nierman; David DeShazer; Heenam Stanley Kim; Hervé Tettelin; Karen E Nelson; Tamara Feldblyum; Ricky L Ulrich; Catherine M Ronning; Lauren M Brinkac; Sean C Daugherty; Tanja D Davidsen; Robert T Deboy; George Dimitrov; Robert J Dodson; A Scott Durkin; Michelle G Giglio; Daniel H Haft; Hoda Khouri; James F Kolonay; Ramana Madupu; Yasmin Mohammoud; William C Nelson; Diana Radune; Claudia M Romero; Saul Sarria; Jeremy Selengut; Christine Shamblin; Steven A Sullivan; Owen R White; Yan Yu; Nikhat Zafar; Liwei Zhou; Claire M Fraser-Liggett
Structural flexibility in the Burkholderia mallei genome.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(39):14246-51.
2004: Wei-Gang Qiu; Steven E Schutzer; John F Bruno; Oliver Attie; Yun Xu; John J Dunn; Claire M Fraser-Liggett; Sherwood Casjens; Benjamin J Luft
Genetic exchange and plasmid transfers in Borrelia burgdorferi sensu stricto revealed by three-way genome comparisons and multilocus sequence typing.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(39):14150-5.
2004: Talima Pearson; Joseph D Busch; Jacques Ravel; Timothy D Read; Shane D Rhoton; Jana M U'Ren; Tatum S Simonson; Sergey M Kachur; Rebecca R Leadem; Michelle L Cardon; Matthew N Van Ert; Lynn Y Huynh; Claire M Fraser-Liggett; Paul Keim
Phylogenetic discovery bias in Bacillus anthracis using single-nucleotide polymorphisms from whole-genome sequencing.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(37):13536-41.
2004: Matthew Breen; Christophe Hitte; Travis D Lorentzen; Rachael Thomas; Edouard Cadieu; Leah Sabacan; Allyson Scott; Gwenaelle Evanno; Heidi G Parker; Ewen F Kirkness; Ruth Hudson; Richard Guyon; Gregory G Mahairas; Boris Gelfenbeyn; Claire M Fraser-Liggett; Catherine André; Francis Galibert; Elaine A Ostrander
An integrated 4249 marker FISH/RH map of the canine genome.
BMC genomics 2004;5():65.
2004: Claire M Fraser-Liggett
Exploring the boundaries of life.
Trends in microbiology 2004;12(9):404-5.
2004: Garry S A Myers; Claire M Fraser-Liggett
Non-pathogenic bacteria take center stage: a lesson in contrasts.
Trends in microbiology 2004;12(7):303-5.
2004: Alex R Hoffmaster; Jacques Ravel; David Rasko; Gail D Chapman; Michael D Chute; Chung K Marston; Barun K De; Claudio T Sacchi; Collette Fitzgerald; Leonard W Mayer; Martin C J Maiden; Fergus G Priest; Margaret Barker; Lingxia Jiang; Regina Z Cer; Jennifer Rilstone; Scott N Peterson; Robbin S Weyant; Darrell R Galloway; Timothy D Read; Tanja Popovic; Claire M Fraser-Liggett
Identification of anthrax toxin genes in a Bacillus cereus associated with an illness resembling inhalation anthrax.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(22):8449-54.
2004: John F Heidelberg; Rekha Seshadri; Shelley A Haveman; Christopher L Hemme; Ian Paulsen; James F Kolonay; Jonathan Eisen; Naomi Ward; Barbara Methe; Lauren M Brinkac; Sean C Daugherty; Robert T Deboy; Robert J Dodson; A Scott Durkin; Ramana Madupu; William C Nelson; Steven A Sullivan; Derrick Fouts; Daniel H Haft; Jeremy Selengut; Jeremy D Peterson; Tanja M Davidsen; Nikhat Zafar; Liwei Zhou; Diana Radune; George Dimitrov; Mark Hance; Kevin Tran; Hoda Khouri; John Gill; Terry R Utterback; Tamara V Feldblyum; Judy D Wall; Gerrit Voordouw; Claire M Fraser-Liggett
The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough.
Nature biotechnology 2004;22(5):554-9.
2004: Claire M Fraser-Liggett
An uncertain call to arms.
Science (New York, N.Y.) 2004;304(5669):359.
2004: Rekha Seshadri; Garry S A Myers; Hervé Tettelin; Jonathan Eisen; John F Heidelberg; Robert J Dodson; Tanja M Davidsen; Robert T DeBoy; Derrick E Fouts; Dan H Haft; Jeremy Selengut; Qinghu Ren; Lauren M Brinkac; Ramana Madupu; Jamie Kolonay; Scott A Durkin; Sean C Daugherty; Jyoti Shetty; Alla Shvartsbeyn; Elizabeth Gebregeorgis; Keita Geer; Getahun Tsegaye; Joel Malek; Bola Ayodeji; Sofiya Shatsman; Michael P McLeod; David Smajs; Jerrilyn K Howell; Sangita Pal; Anita Amin; Pankaj Vashisth; Thomas Z McNeill; Qin Xiang; Erica Sodergren; Ernesto Baca; George M Weinstock; Steven J Norris; Claire M Fraser-Liggett; Ian Paulsen
Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(15):5646-51.
2004: David Rasko; Claire M Fraser-Liggett
Bugs N the 'hood.
Trends in microbiology 2004;12(4):155-6.
2004: Richard A Gibbs; George M Weinstock; Michael L Metzker; Donna M Muzny; Erica J Sodergren; Steven Scherer; Graham Scott; David Steffen; Kim C Worley; Paula E Burch; Geoffrey Okwuonu; Sandra Hines; Lora Lewis; Christine DeRamo; Oliver Delgado; Shannon Dugan-Rocha; George Miner; Margaret Morgan; Alicia Hawes; Rachel Gill; Robert A Holt; Mark D Adams; Peter G Amanatides; Holly Baden-Tillson; Mary Barnstead; Soo Chin; Cheryl A Evans; Steve Ferriera; Carl Fosler; Anna Glodek; Zhiping Gu; Don Jennings; Cheryl L Kraft; Trixie Nguyen; Cynthia M Pfannkoch; Cynthia Sitter; Granger G Sutton; J Craig Venter; Trevor Woodage; Douglas Smith; Hong-Mei Lee; Erik Gustafson; Patrick Cahill; Arnold Kana; Lynn Doucette-Stamm; Keith Weinstock; Kim Fechtel; Robert B Weiss; Diane M Dunn; Eric Green; Robert W Blakesley; Gerard G Bouffard; Pieter J De Jong; Kazutoyo Osoegawa; Baoli Zhu; Marco Marra; Jacqueline Schein; Ian Bosdet; Chris Fjell; Steven Jones; Martin Krzywinski; Carrie Mathewson; Asim Siddiqui; Natasja Wye; John McPherson; Shaying Zhao; Claire M Fraser-Liggett; Jyoti Shetty; Sofiya Shatsman; Keita Geer; Yixin Chen; Sofyia Abramzon; William C Nierman; Paul H Havlak; Rui Chen; K James Durbin; Amy Egan; Yanru Ren; Xing-Zhi Song; Bingshan Li; Yue Liu; Xiang Qin; Simon Cawley; Kim C Worley; A J Cooney; Lisa M D'Souza; Kirt Martin; Jia Qian Wu; Manuel Gonzalez-Garay; Andrew R Jackson; Kenneth J Kalafus; Michael P McLeod; Aleksandar Milosavljevic; Davinder Virk; Andrei Volkov; David A Wheeler; Zhengdong D Zhang; Jeffrey A Bailey; Evan E Eichler; Eray Tuzun; Ewan Birney; Emmanuel Mongin; Abel Ureta-Vidal; Cara Woodwark; Evgeny Zdobnov; Peer Bork; Mikita Suyama; David Torrents; Marina Alexandersson; Barbara J Trask; Janet M Young; Hui Huang; Huajun Wang; Heming Xing; Sue Daniels; Darryl Gietzen; Jeanette Schmidt; Kristian Stevens; Ursula Vitt; Jim Wingrove; Francisco Camara; M Mar Albà; Josep F Abril; Roderic Guigo; Arian Smit; Inna Dubchak; Edward M Rubin; Olivier Couronne; Alexander Poliakov; Norbert Hübner; Detlev Ganten; Claudia Goesele; Oliver Hummel; Thomas Kreitler; Young-Ae Lee; Jan Monti; Herbert Schulz; Heike Zimdahl; Heinz Himmelbauer; Hans Lehrach; Howard J Jacob; Susan Bromberg; Jo Gullings-Handley; Michael I Jensen-Seaman; Anne E Kwitek; Jozef Lazar; Dean Pasko; Peter Tonellato; Simon Twigger; Chris P Ponting; Jose M Duarte; Stephen Rice; Leo Goodstadt; Scott A Beatson; Richard Emes; Eitan E Winter; Caleb Webber; Petra Brandt; Gerald Nyakatura; Margaret Adetobi; Francesca Chiaromonte; Laura Elnitski; Pallavi Eswara; Ross C Hardison; Minmei Hou; Diana Kolbe; Kateryna Makova; Webb Miller; Anton Nekrutenko; Cathy Riemer; Scott Schwartz; James TAYLOR; Shan Yang; Yi Zhang; Klaus Lindpaintner; T Dan Andrews; Mario Caccamo; Michele Clamp; Laura Clarke; Valerie Curwen; Richard Durbin; Eduardo Eyras; Stephen M Searle; Gregory Cooper; Serafim Batzoglou; Michael Brudno; Arend Sidow; Eric A Stone; J Craig Venter; Bret Payseur; Guillaume Bourque; Carlos López-Otín; Xose S Puente; Kushal Chakrabarti; Sourav Chatterji; Colin Dewey; Lior Pachter; Nicolas Bray; Von Bing Yap; Anat Caspi; Glenn Tesler; Pavel A Pevzner; David Haussler; Krishna M Roskin; Robert Baertsch; Hiram Clawson; Terrence S Furey; Angie S Hinrichs; Donna Karolchik; W James Kent; Kate R Rosenbloom; Heather Trumbower; Matt Weirauch; David N Cooper; Peter D Stenson; Bin Ma; Michael Brent; Manimozhiyan Arumugam; David Shteynberg; Richard R Copley; Martin Taylor; Harold Riethman; Uma Mudunuri; Jane Peterson; Mark Guyer; Adam Felsenfeld; Susan Old; Stephen Mockrin; Francis S Collins
Genome sequence of the Brown Norway rat yields insights into mammalian evolution.
Nature 2004;428(6982):493-521.
2004: Elodie Ghedin; Frédéric Bringaud; Jeremy Peterson; Peter J Myler; Matthew Berriman; Alasdair Ivens; Björn Andersson; Esteban Bontempi; Jonathan Eisen; Samuel V Angiuoli; David Wanless; Anna Von Arx; Lee Murphy; Nicola Lennard; Steven L Salzberg; Mark D Adams; Owen R White; Neil Hall; Kenneth Stuart; Claire M Fraser-Liggett; Najib M El-Sayed
Gene synteny and evolution of genome architecture in trypanosomatids.
Molecular and biochemical parasitology 2004;134(2):183-91.
2004: Karen E Nelson; Claire M Fraser-Liggett
Champions of versatility.
Trends in microbiology 2004;12(3):111-2.
2004: William C Nierman; Claire M Fraser-Liggett
The power in comparison.
Trends in microbiology 2004;12(2):62-3.
2004: Karen E Nelson; Derrick E Fouts; Emmanuel F Mongodin; Jacques Ravel; Robert T DeBoy; James F Kolonay; David Rasko; Samuel V Angiuoli; Steven R Gill; Ian Paulsen; Jeremy Peterson; Owen R White; William C Nelson; William Nierman; Maureen J Beanan; Lauren M Brinkac; Sean C Daugherty; Robert J Dodson; A Scott Durkin; Ramana Madupu; Daniel H Haft; Jeremy Selengut; Susan Van Aken; Hoda Khouri; Nadia Fedorova; Heather Forberger; Bao Tran; Sophia Kathariou; Laura D Wonderling; Gaylen A Uhlich; Darrell O Bayles; John B Luchansky; Claire M Fraser-Liggett
Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species.
Nucleic acids research 2004;32(8):2386-95.
2004: David Rasko; Jacques Ravel; Ole Andreas Økstad; Erlendur Helgason; Regina Z Cer; Lingxia Jiang; Kelly A Shores; Derrick E Fouts; Nicolas J Tourasse; Samuel V Angiuoli; James F Kolonay; William C Nelson; Anne-Brit Kolstø; Claire M Fraser-Liggett; Timothy D Read
The genome sequence of Bacillus cereus ATCC 10987 reveals metabolic adaptations and a large plasmid related to Bacillus anthracis pXO1.
Nucleic acids research 2004;32(3):977-88.
2004: Claire M Fraser-Liggett
A genomics-based approach to biodefence preparedness.
Nature reviews. Genetics 2004;5(1):23-33.
2004: Claire M Fraser-Liggett
All things great and small.
Trends in microbiology 2004;12(1):7-8.
2003: Catherine A Whitelaw; W Brad Barbazuk; Geo Pertea; Agnes P Chan; Foo Cheung; Yuandan Lee; Li Zheng; S van Heeringen; Svetlana Karamycheva; Jeffrey L Bennetzen; Phillip SanMiguel; Nathan Lakey; Joseph A Bedell; Y Yuan; Muhammad A Budiman; A Resnick; S Van Aken; Teresa Utterback; S Riedmuller; M Williams; Tamara Feldblyum; K Schubert; R Beachy; Claire M Fraser-Liggett; John Quackenbush
Enrichment of gene-coding sequences in maize by genome filtration.
Science (New York, N.Y.) 2003;302(5653):2118-20.
2003: B A Methé; K E Nelson; Jonathan Eisen; Ian Paulsen; W Nelson; J F Heidelberg; D Wu; M Wu; N Ward; M J Beanan; R J Dodson; R Madupu; L M Brinkac; S C Daugherty; R T DeBoy; A S Durkin; Michelle G Giglio; J F Kolonay; S A Sullivan; D H Haft; J Selengut; T M Davidsen; N Zafar; Owen R White; B Tran; C Romero; H A Forberger; J Weidman; H Khouri; T V Feldblyum; T R Utterback; S E Van Aken; D R Lovley; Claire M Fraser-Liggett
Genome of Geobacter sulfurreducens: metal reduction in subsurface environments.
Science (New York, N.Y.) 2003;302(5652):1967-9.
2003: Ewen F Kirkness; Vineet Bafna; Aaron L Halpern; Samuel Levy; Karin Remington; Douglas B Rusch; Arthur L Delcher; Mihai Pop; Wei Wang; Claire M Fraser-Liggett; J Craig Venter
The dog genome: survey sequencing and comparative analysis.
Science (New York, N.Y.) 2003;301(5641):1898-903.
2003: C Robin Buell; Vinita Joardar; Magdalen Lindeberg; Jeremy Selengut; Ian Paulsen; Michelle G Giglio; Robert J Dodson; Robert T Deboy; A Scott Durkin; James F Kolonay; Ramana Madupu; Sean Daugherty; Lauren Brinkac; Maureen J Beanan; Daniel H Haft; William C Nelson; Tanja Davidsen; Nikhat Zafar; Liwei Zhou; Jia Liu; Qiaoping Yuan; Hoda Khouri; Nadia Fedorova; Bao Tran; Daniel Russell; Kristi Berry; Teresa Utterback; Susan E Van Aken; Tamara V Feldblyum; Mark D'Ascenzo; Wen-Ling Deng; Adela R Ramos; James R Alfano; Samuel Cartinhour; Arun K Chatterjee; Terrence P Delaney; Sondra G Lazarowitz; Gregory B Martin; David J Schneider; Xiaoyan Tang; Carol Bender; Owen R White; Claire M Fraser-Liggett; Alan Collmer
The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(18):10181-6.
2003: Karen E Nelson; Robert D Fleischmann; Robert T Deboy; Ian Paulsen; Derrick E Fouts; Jonathan Eisen; Sean C Daugherty; Robert J Dodson; A Scott Durkin; Michelle G Giglio; Daniel H Haft; James F Kolonay; William C Nelson; Tanya Mason; Luke J Tallon; Jessica Gray; David Granger; Hervé Tettelin; Hong Dong; Jamie L Galvin; Margaret J Duncan; Floyd E Dewhirst; Claire M Fraser-Liggett
Complete genome sequence of the oral pathogenic Bacterium porphyromonas gingivalis strain W83.
Journal of bacteriology 2003;185(18):5591-601.
2003: Eric S Miller; John F Heidelberg; Jonathan Eisen; William C Nelson; A Scott Durkin; Ann Ciecko; Tamara Feldblyum; Owen R White; Ian Paulsen; William C Nierman; Jong Lee; Bridget Szczypinski; Claire M Fraser-Liggett
Complete genome sequence of the broad-host-range vibriophage KVP40: comparative genomics of a T4-related bacteriophage.
Journal of bacteriology 2003;185(17):5220-33.
2003: Najib M A El-Sayed; Elodie Ghedin; Jinming Song; Annette MacLeod; Frederic Bringaud; Christopher Larkin; David Wanless; Jeremy Peterson; Lihua Hou; Sonya Taylor; Alison Tweedie; Nicolas Biteau; Hanif Khalak; Xiaoying Lin; Tanya Mason; Linda Hannick; Elisabet Caler; Gaëlle Blandin; Daniella Bartholomeu; Anjana J Simpson; Samir Kaul; Hong Zhao; Grace Pai; Susan Van Aken; Teresa Utterback; Brian Haas; Hean L Koo; Lowell Umayam; Bernard Suh; Caroline Gerrard; Vanessa Leech; Rong Qi; Shiguo Zhou; David Schwartz; Tamara Feldblyum; Steven L Salzberg; Andrew Tait; C Michael R Turner; Elisabetta Ullu; Owen R White; Sara Melville; Mark D Adams; Claire M Fraser-Liggett; John E Donelson
The sequence and analysis of Trypanosoma brucei chromosome II.
Nucleic acids research 2003;31(16):4856-63.
2003: Thomas Weichhart; Markus Horky; johannes söllner; Susanne Gangl; Tamás Henics; Eszter Nagy; Andreas Meinke; Alexander von Gabain; Claire M Fraser-Liggett; Steven R Gill; Martin Hafner; Uwe von Ahsen
Functional selection of vaccine candidate peptides from Staphylococcus aureus whole-genome expression libraries in vitro.
Infection and immunity 2003;71(8):4633-41.
2003: Jonathan Eisen; Claire M Fraser-Liggett
Phylogenomics: intersection of evolution and genomics.
Science (New York, N.Y.) 2003;300(5626):1706-7.
2003: David Alland; Thomas S Whittam; Megan B Murray; M Donald Cave; Manzour H Hazbon; Kim Dix; Mark Kokoris; Andreas Duesterhoeft; Jonathan Eisen; Claire M Fraser-Liggett; Robert D Fleischmann
Modeling bacterial evolution with comparative-genome-based marker systems: application to Mycobacterium tuberculosis evolution and pathogenesis.
Journal of bacteriology 2003;185(11):3392-9.
2003: Timothy D Read; Scott N Peterson; Nicolas Tourasse; Les W Baillie; Ian Paulsen; Karen E Nelson; Hervé Tettelin; Derrick E Fouts; Jonathan Eisen; Steven R Gill; Erik K Holtzapple; Ole Andreas Okstad; Erlendur Helgason; Jennifer Rilstone; Martin Wu; James F Kolonay; Maureen J Beanan; Robert J Dodson; Lauren M Brinkac; Michelle G Giglio; Robert T DeBoy; Ramana Madpu; Sean C Daugherty; A Scott Durkin; Daniel H Haft; William C Nelson; Jeremy D Peterson; Mihai Pop; Hoda M Khouri; Diana Radune; Jonathan L Benton; Yasmin Mahamoud; Lingxia Jiang; Ioana R Hance; Janice F Weidman; Kristi J Berry; Roger D Plaut; Alex M Wolf; Kisha L Watkins; William C Nierman; Alyson Hazen; Robin Cline; Caroline Redmond; Joanne E Thwaite; Owen R White; Steven L Salzberg; Brendan Thomason; Arthur M Friedlander; Theresa Koehler; Philip C Hanna; Anne-Brit Kolstø; Claire M Fraser-Liggett
The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria.
Nature 2003;423(6935):81-6.
2003: Rekha Seshadri; Ian Paulsen; Jonathan Eisen; Timothy D Read; Karen E Nelson; William C Nelson; Naomi L Ward; Hervé Tettelin; Tanja M Davidsen; Maureen J Beanan; Robert T Deboy; Sean C Daugherty; Lauren M Brinkac; Ramana Madupu; Robert J Dodson; Hoda Khouri; Kathy H Lee; Heather A Carty; David Scanlan; Robert A Heinzen; Herbert A Thompson; James E Samuel; Claire M Fraser-Liggett; John F Heidelberg
Complete genome sequence of the Q-fever pathogen Coxiella burnetii.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(9):5455-60.
2003: Timothy D Read; Garry S A Myers; Robert brunham; William C Nelson; Ian Paulsen; John F Heidelberg; Erik Holtzapple; Hoda Khouri; N B Federova; H A Carty; Lowell Umayam; Daniel H Haft; J Peterson; Maureen J Beanan; Owen R White; Steven L Salzberg; Ruching Hsia; Grant McClarty; Roger Rank; Patrik M Bavoil; Claire M Fraser-Liggett
Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC): examining the role of niche-specific genes in the evolution of the Chlamydiaceae.
Nucleic acids research 2003;31(8):2134-47.
2003: Ian Paulsen; L Banerjei; Garry S A Myers; K E Nelson; R Seshadri; T D Read; D E Fouts; Jonathan Eisen; S R Gill; J F Heidelberg; Hervé Tettelin; R J Dodson; L Umayam; L Brinkac; M Beanan; S Daugherty; R T DeBoy; S Durkin; J Kolonay; R Madupu; W Nelson; J Vamathevan; B Tran; J Upton; T Hansen; J Shetty; H Khouri; T Utterback; D Radune; K A Ketchum; B A Dougherty; Claire M Fraser-Liggett
Role of mobile DNA in the evolution of vancomycin-resistant Enterococcus faecalis.
Science (New York, N.Y.) 2003;299(5615):2071-4.
2003: Claire M Fraser-Liggett
A career, in sequences.
Molecular interventions 2003;3(2):62-6.
2003: Duska J Sidjanin; B Miller; James W Kijas; John L McElwee; Jaroslaw Pillardy; JA Malek; G Pai; T Feldblyum; Claire M Fraser-Liggett; Gregory M Acland; G Aguirre
Radiation hybrid map, physical map, and low-pass genomic sequence of the canine prcd region on CFA9 and comparative mapping with the syntenic region on human chromosome 17.
Genomics 2003;81(2):138-48.
2003: Richard Guyon; Ewen F Kirkness; Travis D Lorentzen; Christophe Hitte; Kenine Comstock; Pascale Quignon; Thomas Derrien; Catherine André; Claire M Fraser-Liggett; Francis Galibert; Elaine A Ostrander
Building comparative maps using 1.5x sequence coverage: human chromosome 1p and the canine genome.
Cold Spring Harbor symposia on quantitative biology 2003;68():171-7.
2003: Pascale Quignon; Ewen F Kirkness; Edouard Cadieu; Nizar Touleimat; Richard Guyon; Corinne Renier; Christophe Hitte; Catherine André; Claire M Fraser-Liggett; Francis Galibert
Comparison of the canine and human olfactory receptor gene repertoires.
Genome biology 2003;4(12):R80.
2002: K E Nelson; C Weinel; Ian Paulsen; R J Dodson; H Hilbert; V A P Martins dos Santos; D E Fouts; S R Gill; Mihai Pop; M Holmes; L Brinkac; M Beanan; R T DeBoy; S Daugherty; J Kolonay; R Madupu; W Nelson; Owen R White; J Peterson; H Khouri; I Hance; P Chris Lee; E Holtzapple; D Scanlan; K Tran; A Moazzez; T Utterback; M Rizzo; K Lee; D Kosack; D Moestl; Holger Wedler; J Lauber; D Stjepandic; J Hoheisel; M Straetz; S Heim; C Kiewitz; Jonathan Eisen; K N Timmis; A Düsterhöft; B Tümmler; Claire M Fraser-Liggett
Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440.
Environmental microbiology 2002;4(12):799-808.
2002: Claire M Fraser-Liggett; Jonathan Eisen; Karen E Nelson; Ian Paulsen; Steven L Salzberg
The value of complete microbial genome sequencing (you get what you pay for).
Journal of bacteriology 2002;184(23):6403-5; discusion 6405.
2002: John F Heidelberg; Ian Paulsen; Karen E Nelson; Eric J Gaidos; William C Nelson; Timothy D Read; Jonathan Eisen; Rekha Seshadri; Naomi Ward; Barbara Methe; Rebecca A Clayton; Terry Meyer; Alexandre Tsapin; James Scott; Maureen Beanan; Lauren Brinkac; Sean Daugherty; Robert T DeBoy; Robert J Dodson; A Scott Durkin; Daniel H Haft; James F Kolonay; Ramana Madupu; Jeremy D Peterson; Lowell A Umayam; Owen R White; Alex M Wolf; Jessica Vamathevan; Janice Weidman; Marjorie Impraim; Kathy Lee; Kristy Berry; Chris Lee; Jacob Mueller; Hoda Khouri; John Gill; Terry R Utterback; Lisa A McDonald; Tamara V Feldblyum; Hamilton O Smith; J Craig Venter; Kenneth H Nealson; Claire M Fraser-Liggett
Genome sequence of the dissimilatory metal ion-reducing bacterium Shewanella oneidensis.
Nature biotechnology 2002;20(11):1118-23.
2002: Robert A Holt; G. SUBRAMANIAN; Aaron Halpern; Granger G Sutton; Rosane Charlab; Deborah R Nusskern; Patrick Wincker; andrew clark; José M C Ribeiro; Ron Wides; Steven L Salzberg; Brendan Loftus; Mark Yandell; William H Majoros; Douglas B Rusch; Zhongwu Lai; Cheryl L Kraft; Josep F Abril; Veronique Anthouard; Peter Arensburger; Peter W Atkinson; Holly Baden; Veronique de Berardinis; Danita Baldwin; Vladimir Benes; Jim Biedler; Claudia Blass; Randall Bolanos; Didier Boscus; Mary Barnstead; Shuang Cai; Angela Center; Kabir Chaturverdi; George Christophides; Mathew A Chrystal; Michele Clamp; Anibal Cravchik; Val Curwen; Ali Dana; Art Delcher; Ian Dew; Cheryl A Evans; Michael Flanigan; Anne Grundschober-Freimoser; Lisa Friedli; Zhiping Gu; Ping Guan; Roderic Guigo; Maureen E Hillenmeyer; Susanne L Hladun; James R Hogan; Young S Hong; Jeffrey Hoover; Olivier Jaillon; Zhaoxi Ke; Chinnappa Kodira; Elena Kokoza; Anastasios Koutsos; Ivica Letunic; Alex Levitsky; Yong Liang; Jhy-Jhu Lin; Neil F Lobo; John R Lopez; Joel A Malek; Tina C McIntosh; Stephan Meister; Jason Miller; Clark Mobarry; Emmanuel Mongin; Sean D Murphy; David A O'Brochta; Cynthia Pfannkoch; Rong Qi; Megan A Regier; Karin Remington; Hongguang Shao; Maria V Sharakhova; Cynthia D Sitter; Jyoti Shetty; Thomas J Smith; Renee Strong; Jingtao Sun; Dana Thomasova; Lucas Q Ton; Pantelis Topalis; Zhijian Tu; Maria F Unger; Brian Walenz; Aihui Wang; Jian Wang; Mei Wang; Xuelan Wang; Kerry J Woodford; Jennifer Wortman; Martin Wu; Alison Yao; Evgeny M Zdobnov; Hongyu Zhang; Qi Zhao; Shaying Zhao; Shiaoping C Zhu; Igor Zhimulev; Mario Coluzzi; Alessandra della Torre; Charles W Roth; Christos Louis; Francis Kalush; Richard J Mural; Eugene W Myers; Mark D Adams; Hamilton O Smith; Samuel Broder; Malcolm J Gardner; Claire M Fraser-Liggett; Ewan Birney; Peer Bork; Paul T Brey; J Craig Venter; Jean Weissenbach; Fotis C Kafatos; Frank H Collins; Stephen L Hoffman
The genome sequence of the malaria mosquito Anopheles gambiae.
Science (New York, N.Y.) 2002;298(5591):129-49.
2002: Malcolm J Gardner; Shamira J Shallom; Jane M Carlton; Steven L Salzberg; Vishvanath Nene; Azadeh Shoaibi; Anne Ciecko; Jeffery Lynn; Michael Rizzo; Bruce Weaver; Behnam Jarrahi; Michael Brenner; Babak Parvizi; Luke Tallon; Azita Moazzez; David Granger; Claire Fujii; Cheryl Hansen; James Pederson; Tamara Feldblyum; Jeremy Peterson; Bernard Suh; Sam Angiuoli; Mihaela Pertea; Jonathan Allen; Jeremy Selengut; Owen R White; Leda M Cummings; Hamilton O Smith; Mark D Adams; J Craig Venter; Daniel J Carucci; Stephen L Hoffman; Claire M Fraser-Liggett
Sequence of Plasmodium falciparum chromosomes 2, 10, 11 and 14.
Nature 2002;419(6906):531-4.
2002: Jane M Carlton; Samuel V Angiuoli; Bernard B Suh; Taco W Kooij; Mihaela Pertea; Joana Carneiro Da Silva; Maria D Ermolaeva; Jonathan E Allen; Jeremy D Selengut; Hean L Koo; Jeremy D Peterson; Mihai Pop; Daniel S Kosack; Martin F Shumway; Shelby L Bidwell; Shamira J Shallom; Susan E van Aken; Steven B Riedmuller; Tamara V Feldblyum; Jennifer K Cho; John Quackenbush; Martha Sedegah; Azadeh Shoaibi; Leda M Cummings; Laurence Florens; John R Yates; J Dale Raine; Robert E Sinden; Michael A Harris; Deirdre A Cunningham; Peter R Preiser; Lawrence W Bergman; Akhil B Vaidya; Leo H van Lin; Chris J Janse; Andrew P Waters; Hamilton O Smith; Owen R White; Steven L Salzberg; J Craig Venter; Claire M Fraser-Liggett; Stephen L Hoffman; Malcolm J Gardner; Daniel J Carucci
Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii.
Nature 2002;419(6906):512-9.
2002: Malcolm J Gardner; Neil Hall; Eula Fung; Owen R White; Matthew Berriman; Richard W Hyman; Jane M Carlton; Arnab Pain; Karen E Nelson; Sharen Bowman; Ian Paulsen; Keith James; Jonathan Eisen; Kim Rutherford; Steven L Salzberg; Alister Craig; Sue Kyes; Man-Suen Chan; Vishvanath Nene; Shamira J Shallom; Bernard Suh; Jeremy Peterson; Sam Angiuoli; Mihaela Pertea; Jonathan Allen; Jeremy Selengut; Daniel Haft; Michael W Mather; Akhil B Vaidya; David M A Martin; Alan H Fairlamb; Martin J Fraunholz; David S Roos; Stuart A Ralph; Geoffrey I McFadden; Leda M Cummings; G. SUBRAMANIAN; Chris Mungall; J Craig Venter; Daniel J Carucci; Stephen L Hoffman; Chris Newbold; Ronald W Davis; Claire M Fraser-Liggett; Bart Barrell
Genome sequence of the human malaria parasite Plasmodium falciparum.
Nature 2002;419(6906):498-511.
2002: Ian Paulsen; Rekha Seshadri; Karen E Nelson; Jonathan Eisen; John F Heidelberg; Timothy D Read; Robert J Dodson; Lowell Umayam; Lauren M Brinkac; Maureen J Beanan; Sean C Daugherty; Robert T Deboy; A Scott Durkin; James F Kolonay; Ramana Madupu; William C Nelson; Bola Ayodeji; Margaret Kraul; Jyoti Shetty; Joel Malek; Susan E Van Aken; Steven Riedmuller; Hervé Tettelin; Steven R Gill; Owen R White; Steven L Salzberg; David L Hoover; Luther E Lindler; Shirley M Halling; Stephen M Boyle; Claire M Fraser-Liggett
The Brucella suis genome reveals fundamental similarities between animal and plant pathogens and symbionts.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(20):13148-53.
2002: Robert D Fleischmann; David Alland; Jonathan Eisen; L Carpenter; Owen R White; J Peterson; Robert T Deboy; Robert J Dodson; Michelle G Giglio; Daniel H Haft; EK Hickey; James F Kolonay; William C Nelson; Lowell Umayam; Maria D Ermolaeva; Steven L Salzberg; Arthur L Delcher; Teresa Utterback; Janice Weidman; Hoda Khouri; J Gill; A Mikula; William R Bishai; W R Jacobs Jr; J Craig Venter; Claire M Fraser-Liggett
Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains.
Journal of bacteriology 2002;184(19):5479-90.
2002: Hervé Tettelin; Vega Masignani; Michael J Cieslewicz; Jonathan Eisen; Scott Peterson; Michael R Wessels; Ian Paulsen; Karen E Nelson; Immaculada Margarit; Timothy D Read; Lawrence C Madoff; Alex M Wolf; Maureen J Beanan; Lauren M Brinkac; Sean C Daugherty; Robert T DeBoy; A Scott Durkin; James F Kolonay; Ramana Madupu; Matthew R Lewis; Diana Radune; Nadezhda B Fedorova; David Scanlan; Hoda Khouri; Stephanie Mulligan; Heather A Carty; Robin T Cline; Susan E Van Aken; John Gill; Maria Scarselli; Marirosa Mora; Emilia T Iacobini; Cecilia Brettoni; Giuliano Galli; Massimo Mariani; Filippo Vegni; Domenico Maione; Daniela Rinaudo; Rino Rappuoli; John L Telford; Dennis L Kasper; Guido Grandi; Claire M Fraser-Liggett
Complete genome sequence and comparative genomic analysis of an emerging human pathogen, serotype V Streptococcus agalactiae.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(19):12391-6.
2002: Simon G Gregory; Mandeep Sekhon; Jacqueline Schein; Shaying Zhao; Kazutoyo Osoegawa; Carol E Scott; Richard S Evans; Paul W Burridge; Tony V Cox; Christopher A Fox; Richard D Hutton; Ian R Mullenger; Kimbly J Phillips; James Smith; Jim Stalker; Glen J Threadgold; Ewan Birney; Kristine Wylie; Asif Chinwalla; John Wallis; LaDeana Hillier; Jason Carter; Tony Gaige; Sara Jaeger; Colin Kremitzki; Dan Layman; Jason Maas; Rebecca McGrane; Kelly Mead; Rebecca Walker; Steven Jones; Michael Smith; Jennifer Asano; Ian Bosdet; Susanna Chan; Suganthi Chittaranjan; Readman Chiu; Chris Fjell; Dan Fuhrmann; Noreen Girn; Catharine Gray; Ran Guin; Letticia Hsiao; Martin Krzywinski; Reta Kutsche; Soo Sen Lee; Carrie Mathewson; Candice McLeavy; Steve Messervier; Steven Ness; Pawan Pandoh; Anna-Liisa Prabhu; Parvaneh Saeedi; Duane Smailus; Lorraine Spence; Jeff Stott; Sheryl Taylor; Wesley Terpstra; Miranda Tsai; Jill Vardy; Natasja Wye; George Yang; Sofiya Shatsman; Bola Ayodeji; Keita Geer; Getahun Tsegaye; Alla Shvartsbeyn; Elizabeth Gebregeorgis; Margaret Krol; Daniel Russell; Larry Overton; Joel A Malek; Mike Holmes; Michael Heaney; Jyoti Shetty; Tamara Feldblyum; William C Nierman; Joseph J Catanese; Tim Hubbard; Robert H Waterston; Jane Rogers; Pieter J de Jong; Claire M Fraser-Liggett; Marco Marra; John D McPherson; David R Bentley
A physical map of the mouse genome.
Nature 2002;418(6899):743-50.
2002: Jonathan Eisen; Karen E Nelson; Ian Paulsen; John F Heidelberg; Martin Wu; Robert J Dodson; Robert Deboy; Michelle G Giglio; William C Nelson; Daniel H Haft; Erin K Hickey; Jeremy D Peterson; A Scott Durkin; James L Kolonay; Fan Yang; Ingeborg Holt; Lowell A Umayam; Tanya Mason; Michael Brenner; Terrance P Shea; Debbie Parksey; William C Nierman; Tamara V Feldblyum; Cheryl L Hansen; M Brook Craven; Diana Radune; Jessica Vamathevan; Hoda Khouri; Owen R White; Tanja M Gruber; Karen A Ketchum; J Craig Venter; Hervé Tettelin; Donald A Bryant; Claire M Fraser-Liggett
The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic, anaerobic, green-sulfur bacterium.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(14):9509-14.
2002: Timothy D Read; Steven L Salzberg; Mihai Pop; Martin Shumway; Lowell Umayam; Lingxia Jiang; Erik Holtzapple; Joseph D Busch; Kimothy Smith; James M Schupp; Daniel Solomon; Paul Keim; Claire M Fraser-Liggett
Comparative genome sequencing for discovery of novel polymorphisms in Bacillus anthracis.
Science (New York, N.Y.) 2002;296(5575):2028-33.
2002: Hildegard Etz; Duc Bui Minh; Tamás Henics; Agnieszka Dryla; Birgit Winkler; Christine Triska; Aoife P Boyd; johannes söllner; Walter Schmidt; Uwe von Ahsen; Michael Buschle; Steven R Gill; James F Kolonay; Hanif Khalak; Claire M Fraser-Liggett; Alexander von Gabain; Eszter Nagy; Andreas Meinke
Identification of in vivo expressed vaccine candidate antigens from Staphylococcus aureus.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(10):6573-8.
2002: Oded Béjà; Marcelino Suzuki; John F Heidelberg; William C Nelson; Christina M Preston; Tohru Hamada; Jonathan Eisen; Claire M Fraser-Liggett; Edward F DeLong
Unsuspected diversity among marine aerobic anoxygenic phototrophs.
Nature 2002;415(6872):630-3.
2002: Michelle Dziejman; Emmy Balon; Dana Boyd; Claire M Fraser-Liggett; John F Heidelberg; John J Mekalanos
Comparative genomic analysis of Vibrio cholerae: genes that correlate with cholera endemic and pandemic disease.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(3):1556-61.
2001: N Ward; Jonathan Eisen; Claire M Fraser-Liggett; E Stackebrandt
Sequenced strains must be saved from extinction.
Nature 2001;414(6860):148.
2001: Claire M Fraser-Liggett; M R Dando
Genomics and future biological weapons: the need for preventive action by the biomedical community.
Nature genetics 2001;29(3):253-6.
2001: Shaying Zhao; S Shatsman; B Ayodeji; K Geer; G Tsegaye; M Krol; E Gebregeorgis; Alla Shvartsbeyn; D Russell; L Overton; Lingxia Jiang; G Dimitrov; K Tran; Jyoti U Shetty; JA Malek; Tamara Feldblyum; William C Nierman; Claire M Fraser-Liggett
Mouse BAC ends quality assessment and sequence analyses.
Genome research 2001;11(10):1736-45.
2001: Hervé Tettelin; K E Nelson; Ian Paulsen; Jonathan Eisen; T D Read; S Peterson; J Heidelberg; R T DeBoy; D H Haft; R J Dodson; A S Durkin; Michelle G Giglio; J F Kolonay; W C Nelson; J D Peterson; L A Umayam; Owen R White; Steven L Salzberg; M R Lewis; D Radune; E Holtzapple; H Khouri; A M Wolf; T R Utterback; C L Hansen; L A McDonald; T V Feldblyum; S Angiuoli; T Dickinson; E K Hickey; I E Holt; B J Loftus; F Yang; Hamilton O Smith; J C Venter; B A Dougherty; Donald A Morrison; Susan Kay Hollingshead; Claire M Fraser-Liggett
Complete genome sequence of a virulent isolate of Streptococcus pneumoniae.
Science (New York, N.Y.) 2001;293(5529):498-506.
2001: W C Nierman; T V Feldblyum; M T Laub; Ian Paulsen; K E Nelson; Jonathan Eisen; J F Heidelberg; M R Alley; N Ohta; Janine R Maddock; I Potocka; W C Nelson; A Newton; C Stephens; N D Phadke; Bert Ely; R T DeBoy; R J Dodson; A S Durkin; Michelle G Giglio; D H Haft; J F Kolonay; J Smit; M B Craven; H Khouri; J Shetty; K Berry; T Utterback; K Tran; A Wolf; J Vamathevan; M Ermolaeva; Owen R White; Steven L Salzberg; J C Venter; L Shapiro; Claire M Fraser-Liggett; Jonathan Eisen
Complete genome sequence of Caulobacter crescentus.
Proceedings of the National Academy of Sciences of the United States of America 2001;98(7):4136-41.
2001: A B Sparks; Scott N Peterson; C Bell; B J Loftus; L Hocking; D P Cahill; Frank J Frassica; Elizabeth A Streeten; Michael A. Levine; Claire M Fraser-Liggett; Mark D Adams; Samuel Broder; J Craig Venter; Kenneth W Kinzler; Bert Vogelstein; S H Ralston
Mutation screening of the TNFRSF11A gene encoding receptor activator of NF kappa B (RANK) in familial and sporadic Paget's disease of bone and osteosarcoma.
Calcified tissue international 2001;68(3):151-5.
2001: Karen E Nelson; Jonathan Eisen; Claire M Fraser-Liggett
Genome of Thermotoga maritima MSB8.
Methods in enzymology 2001;330():169-80.
2001: Scott N Peterson; Claire M Fraser-Liggett
The complexity of simplicity.
Genome biology 2001;2(2):COMMENT2002.
2000: Michael T Laub; Harley McAdams; Tamara Feldblyum; Claire M Fraser-Liggett; Lucy Shapiro
Global analysis of the genetic network controlling a bacterial cell cycle.
Science (New York, N.Y.) 2000;290(5499):2144-8.
2000: M Salanoubat; K Lemcke; M Rieger; W Ansorge; M Unseld; B Fartmann; G Valle; H Blöcker; Manuel Perez-Alonso; B Obermaier; M Delseny; M Boutry; L A Grivell; R Mache; P Puigdomènech; V De Simone; N Choisne; F Artiguenave; C Robert; P Brottier; P Wincker; L Cattolico; J Weissenbach; W Saurin; F Quétier; M Schäfer; S Müller-Auer; C Gabel; M Fuchs; V Benes; E Wurmbach; H Drzonek; H Erfle; N Jordan; S Bangert; R Wiedelmann; H Kranz; H Voss; R Holland; P Brandt; G Nyakatura; A Vezzi; M D'Angelo; A Pallavicini; S Toppo; B Simionati; A Conrad; K Hornischer; G Kauer; T H Löhnert; G Nordsiek; J Reichelt; M Scharfe; O Schön; M Bargues; J Terol; Joan CLIMENT; P Navarro; C Collado; A Perez-Perez; B Ottenwälder; D Duchemin; R Cooke; M Laudie; C Berger-Llauro; B Purnelle; D Masuy; M de Haan; A C Maarse; J P Alcaraz; A Cottet; E Casacuberta; A Monfort; A Argiriou; M flores; R Liguori; D Vitale; G Mannhaupt; D Haase; H Schoof; S Rudd; P Zaccaria; H W Mewes; K F Mayer; S Kaul; C D Town; H L Koo; L J Tallon; J Jenkins; T Rooney; M Rizzo; A Walts; T Utterback; C Y Fujii; T P Shea; T H Creasy; B Haas; R Maiti; D Wu; J Peterson; S Van Aken; G Pai; J Militscher; P Sellers; J E Gill; T V Feldblyum; D Preuss; X Lin; W C Nierman; Steven L Salzberg; Owen R White; J C Venter; Claire M Fraser-Liggett; T Kaneko; Y Nakamura; S Sato; T Kato; E Asamizu; S Sasamoto; T Kimura; K Idesawa; K Kawashima; Y Kishida; C Kiyokawa; M Kohara; M Matsumoto; A Matsuno; A Muraki; S Nakayama; N Nakazaki; S Shinpo; C Takeuchi; T Wada; A Watanabe; M Yamada; M Yasuda; S Tabata
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.
Nature 2000;408(6814):820-2.
2000: A Theologis; J R Ecker; C J Palm; N A Federspiel; S Kaul; Owen R White; J Alonso; H Altafi; R Araujo; C L Bowman; S Y Brooks; E Buehler; A Chan; Q Chao; H Chen; R F Cheuk; C W Chin; M K Chung; L Conn; A B Conway; A R Conway; T H Creasy; K Dewar; P Dunn; P Etgu; T V Feldblyum; J Feng; B Fong; C Y Fujii; J E Gill; A D Goldsmith; B Haas; N F Hansen; B Hughes; L Huizar; J L Hunter; J Jenkins; C Johnson-Hopson; S Khan; E Khaykin; C J Kim; H L Koo; I Kremenetskaia; D B Kurtz; A Kwan; B Lam; S Langin-Hooper; A Lee; J M Lee; C A Lenz; J H Li; Y Li; X Lin; S X Liu; Z A Liu; J S Luros; R Maiti; A Marziali; J Militscher; M Miranda; M Nguyen; W C Nierman; B I Osborne; G Pai; J Peterson; P K Pham; M Rizzo; T Rooney; D Rowley; H Sakano; Steven L Salzberg; J R Schwartz; P Shinn; A M Southwick; H Sun; L J Tallon; G Tambunga; M J Toriumi; C D Town; T Utterback; S Van Aken; M Vaysberg; V S Vysotskaia; M Walker; D Wu; G Yu; Claire M Fraser-Liggett; J C Venter; R W Davis
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.
Nature 2000;408(6814):816-20.
2000: Karen E Nelson; Ian Paulsen; John F Heidelberg; Claire M Fraser-Liggett
Status of genome projects for nonpathogenic bacteria and archaea.
Nature biotechnology 2000;18(10):1049-54.
2000: Claire M Fraser-Liggett; Jonathan Eisen; Robert D Fleischmann; KA Ketchum; S Peterson
Comparative genomics and understanding of microbial biology.
Emerging infectious diseases 2000;6(5):505-12.
2000: Erika H De Boever; Don B Clewell; Claire M Fraser-Liggett
Enterococcus faecalis conjugative plasmid pAM373: complete nucleotide sequence and genetic analyses of sex pheromone response.
Molecular microbiology 2000;37(6):1327-41.
2000: Joseph Vincent Califano; Todd Kitten; Janina P Lewis; Francis L Macrina; Robert D Fleischmann; Claire M Fraser-Liggett; Margaret J Duncan; Floyd E Dewhirst
Characterization of Porphyromonas gingivalis insertion sequence-like element ISPg5.
Infection and immunity 2000;68(9):5247-53.
2000: Claire M Fraser-Liggett; Jonathan Eisen; Steven L Salzberg
Microbial genome sequencing.
Nature 2000;406(6797):799-803.
2000: J F Heidelberg; Jonathan Eisen; W C Nelson; R A Clayton; Michelle G Giglio; R J Dodson; D H Haft; E K Hickey; J D Peterson; L Umayam; S R Gill; K E Nelson; T D Read; Hervé Tettelin; D Richardson; M D Ermolaeva; J Vamathevan; S Bass; H Qin; I Dragoi; P Sellers; L McDonald; T Utterback; R D Fleishmann; W C Nierman; Owen R White; Steven L Salzberg; Hamilton O Smith; Rita R Colwell; J J Mekalanos; J C Venter; Claire M Fraser-Liggett
DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae.
Nature 2000;406(6795):477-83.
2000: William C Nierman; Jonathan Eisen; Robert D Fleischmann; Claire M Fraser-Liggett
Genome data: what do we learn?
Current opinion in structural biology 2000;10(3):343-8.
2000: N Palmer; Claire M Fraser-Liggett; Sherwood Casjens
Distribution of twelve linear extrachromosomal DNAs in natural isolates of Lyme disease spirochetes.
Journal of bacteriology 2000;182(9):2476-80.
2000: Vishvanath Nene; Richard Bishop; Subhash Morzaria; Malcolm J Gardner; C Sugimoto; Onesmo K Ole-MoiYoi; Claire M Fraser-Liggett; A Irvin
Theileria parva genomics reveals an atypical apicomplexan genome.
International journal for parasitology 2000;30(4):465-74.
2000: Timothy D Read; Robert brunham; C Shen; Steven R Gill; John F Heidelberg; Owen R White; EK Hickey; J Peterson; Teresa Utterback; K Berry; S Bass; K Linher; Janice Weidman; Hoda Khouri; B Craven; C Bowman; Robert J Dodson; Michelle G Giglio; W Nelson; Robert T Deboy; James F Kolonay; Grant McClarty; Steven L Salzberg; Jonathan Eisen; Claire M Fraser-Liggett
Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39.
Nucleic acids research 2000;28(6):1397-406.
2000: Hervé Tettelin; N J Saunders; J Heidelberg; A C Jeffries; K E Nelson; Jonathan Eisen; K A Ketchum; D W Hood; J F Peden; R J Dodson; W C Nelson; Michelle G Giglio; R DeBoy; J D Peterson; E K Hickey; D H Haft; Steven L Salzberg; Owen R White; R D Fleischmann; B A Dougherty; T Mason; A Ciecko; D S Parksey; E Blair; H Cittone; E B Clark; M D Cotton; T R Utterback; H Khouri; H Qin; J Vamathevan; J Gill; V Scarlato; V Masignani; M Pizza; G Grandi; L Sun; Hamilton O Smith; Claire M Fraser-Liggett; E R Moxon; R Rappuoli; J C Venter
Complete genome sequence of Neisseria meningitidis serogroup B strain MC58.
Science (New York, N.Y.) 2000;287(5459):1809-15.
2000: William C Nierman; Jonathan Eisen; Claire M Fraser-Liggett
Microbial genome sequencing 2000: new insights into physiology, evolution and expression analysis.
Research in microbiology 2000;151(2):79-84.
2000: Hans Peter Arnold; Wolfram Zillig; U Ziese; Ingelore Holz; M Crosby; Teresa Utterback; J F Weidmann; J K Kristjanson; HP Klenk; K E Nelson; Claire M Fraser-Liggett
A novel lipothrixvirus, SIFV, of the extremely thermophilic crenarchaeon Sulfolobus.
Virology 2000;267(2):252-66.
2000: Sherwood Casjens; N Palmer; R van Vugt; Wai Mun Huang; Brian Stevenson; Patricia Rosa; Raju Lathigra; Granger Sutton; J Peterson; Robert J Dodson; Daniel H Haft; E Hickey; Michelle G Giglio; Owen R White; Claire M Fraser-Liggett
A bacterial genome in flux: the twelve linear and nine circular extrachromosomal DNAs in an infectious isolate of the Lyme disease spirochete Borrelia burgdorferi.
Molecular microbiology 2000;35(3):490-516.
2000: Timothy D Read; Claire M Fraser-Liggett; Ruching Hsia; Patrik M Bavoil
Comparative analysis of Chlamydia bacteriophages reveals variation localized to a putative receptor binding domain.
Microbial & comparative genomics 2000;5(4):223-31.
2000: Claire M Fraser-Liggett
Microbial genome sequencing: new insights into physiology and evolution.
Novartis Foundation symposium 2000;229():54-8; discussion 58-62.
1999: X Lin; S Kaul; S Rounsley; T P Shea; M I Benito; C D Town; C Y Fujii; T Mason; C L Bowman; M Barnstead; T V Feldblyum; C R Buell; K A Ketchum; J Lee; C M Ronning; H L Koo; K S Moffat; L A Cronin; M Shen; G Pai; S Van Aken; L Umayam; L J Tallon; J E Gill; M D Adams; A J Carrera; T H Creasy; H M Goodman; chris somerville; Gregory Paul Copenhaver; D Preuss; W C Nierman; Owen R White; Jonathan Eisen; Steven L Salzberg; Claire M Fraser-Liggett; J C Venter
Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.
Nature 1999;402(6763):761-8.
1999: Clyde A Hutchison; Scott N Peterson; Steven R Gill; R T Cline; Owen R White; Claire M Fraser-Liggett; Hamilton O Smith; J Craig Venter
Global transposon mutagenesis and a minimal Mycoplasma genome.
Science (New York, N.Y.) 1999;286(5447):2165-9.
1999: Owen R White; Jonathan Eisen; J F Heidelberg; E K Hickey; J D Peterson; R J Dodson; D H Haft; Michelle G Giglio; W C Nelson; D L Richardson; K S Moffat; H Qin; L Jiang; W Pamphile; M Crosby; M Shen; J J Vamathevan; P Lam; L McDonald; T Utterback; C Zalewski; K S Makarova; L Aravind; Mark J Daly; K W Minton; R D Fleischmann; K A Ketchum; K E Nelson; Steven L Salzberg; Hamilton O Smith; J C Venter; Claire M Fraser-Liggett
Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1.
Science (New York, N.Y.) 1999;286(5444):1571-7.
1999: Malcolm J Gardner; Hervé Tettelin; Daniel J Carucci; LM Cummings; Hamilton O Smith; Claire M Fraser-Liggett; J Craig Venter; Stephen L Hoffman
The malaria genome sequencing project: complete sequence of Plasmodium falciparum chromosome 2.
Parassitologia 1999;41(1-3):69-75.
1999: H Dong; Tsute Chen; Floyd E Dewhirst; Robert D Fleischmann; Claire M Fraser-Liggett; Margaret J Duncan
Genomic loci of the Porphyromonas gingivalis insertion element IS1126.
Infection and immunity 1999;67(7):3416-23.
1999: Karen E Nelson; RA Clayton; Steven R Gill; Michelle G Giglio; Robert J Dodson; Daniel H Haft; EK Hickey; J D Peterson; William C Nelson; KA Ketchum; L McDonald; Teresa Utterback; JA Malek; K D Linher; M M Garrett; A M Stewart; M D Cotton; M S Pratt; C A Phillips; D Richardson; John F Heidelberg; Granger Sutton; Robert D Fleischmann; Jonathan Eisen; Owen R White; Steven L Salzberg; Hamilton O Smith; J Craig Venter; Claire M Fraser-Liggett
Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima.
Nature 1999;399(6734):323-9.
1999: W Lin; Karla Jean Fullner; R Clayton; J A Sexton; MB Rogers; K E Calia; Stephen B Calderwood; Claire M Fraser-Liggett; John J Mekalanos
Identification of a vibrio cholerae RTX toxin gene cluster that is tightly linked to the cholera toxin prophage.
Proceedings of the National Academy of Sciences of the United States of America 1999;96(3):1071-6.
1998: Malcolm J Gardner; Hervé Tettelin; Daniel J Carucci; LM Cummings; L Aravind; E V Koonin; S Shallom; T Mason; K Yu; C Fujii; J Pederson; K Shen; J Jing; C Aston; Z Lai; David C Schwartz; Mihaela Pertea; Steven L Salzberg; L Zhou; Granger Sutton; R Clayton; Owen R White; Hamilton O Smith; Claire M Fraser-Liggett; Mark D Adams; J Craig Venter; Stephen L Hoffman
Chromosome 2 sequence of the human malaria parasite Plasmodium falciparum.
Science (New York, N.Y.) 1998;282(5391):1126-32.
1998: RA Clayton; Owen R White; Claire M Fraser-Liggett
Findings emerging from complete microbial genome sequences.
Current opinion in microbiology 1998;1(5):562-6.
1998: Claire M Fraser-Liggett; S J Norris; G M Weinstock; Owen R White; G G Sutton; R Dodson; Michelle G Giglio; E K Hickey; R Clayton; K A Ketchum; E Sodergren; J M Hardham; M P McLeod; Steven L Salzberg; J Peterson; Hanif Khalak; D Richardson; J K Howell; M Chidambaram; T Utterback; L McDonald; P Artiach; C Bowman; M D Cotton; C Fujii; S Garland; B Hatch; K Horst; K Roberts; M Sandusky; J Weidman; Hamilton O Smith; J C Venter
Complete genome sequence of Treponema pallidum, the syphilis spirochete.
Science (New York, N.Y.) 1998;281(5375):375-88.
1998: Steven J Norris; Claire M Fraser-Liggett; George Weinstock
Illuminating the agent of syphilis: the Treponema pallidum genome project.
Electrophoresis 1998;19(4):551-3.
1997: Claire M Fraser-Liggett; S Casjens; W M Huang; G G Sutton; R Clayton; Raju Lathigra; Owen R White; K A Ketchum; R Dodson; E K Hickey; Michelle G Giglio; B Dougherty; J F Tomb; R D Fleischmann; D Richardson; J Peterson; A R Kerlavage; John Quackenbush; Steven L Salzberg; Mark S Hanson; R van Vugt; N Palmer; M D Adams; J Gocayne; J Weidman; T Utterback; L Watthey; L McDonald; P Artiach; C Bowman; S Garland; C Fuji; M D Cotton; K Horst; K Roberts; B Hatch; Hamilton O Smith; J C Venter
Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi.
Nature 1997;390(6660):580-6.
1997: H P Klenk; R A Clayton; J F Tomb; Owen R White; K E Nelson; K A Ketchum; R J Dodson; Michelle G Giglio; E K Hickey; J D Peterson; D L Richardson; A R Kerlavage; D E Graham; Nikos Kyrpides; R D Fleischmann; John Quackenbush; N H Lee; G G Sutton; S Gill; E F Kirkness; B A Dougherty; keith h mckenney; M D Adams; B Loftus; S Peterson; C I Reich; Leslie Klis McNeil; J H Badger; A Glodek; L Zhou; R Overbeek; J D Gocayne; J F Weidman; L McDonald; T Utterback; M D Cotton; T Spriggs; P Artiach; B P Kaine; S M Sykes; P W Sadow; K P D'Andrea; C Bowman; C Fujii; S A Garland; T M Mason; G J Olsen; Claire M Fraser-Liggett; Hamilton O Smith; C R Woese; J C Venter
The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus.
Nature 1997;390(6658):364-70.
1997: J F Tomb; Owen R White; A R Kerlavage; R A Clayton; G G Sutton; R D Fleischmann; K A Ketchum; H P Klenk; S Gill; B A Dougherty; K Nelson; John Quackenbush; L Zhou; E F Kirkness; S Peterson; B Loftus; D Richardson; R Dodson; Hanif Khalak; A Glodek; keith h mckenney; L M Fitzegerald; N Lee; M D Adams; E K Hickey; D E Berg; J D Gocayne; T R Utterback; J D Peterson; J M Kelley; M D Cotton; J M Weidman; C Fujii; C Bowman; L Watthey; E Wallin; W S Hayes; Mark Borodovsky; Peter Karp; Hamilton O Smith; Claire M Fraser-Liggett; J C Venter
The complete genome sequence of the gastric pathogen Helicobacter pylori.
Nature 1997;388(6642):539-47.
1997: Claire M Fraser-Liggett; R D Fleischmann
Strategies for whole microbial genome sequencing and analysis.
Electrophoresis 1997;18(8):1207-16.
1996: William R. Jacobs Jr.; P Brennan; G Curlin; A Ginsberg; M Adams; R Fleischmann; Claire M Fraser-Liggett; J C Venter; T Shinnick; William R Bishai; H Smith; K Stover; G Hatfull
Comparative sequencing.
Science (New York, N.Y.) 1996;274(5284):17-8.
1996: N H Lee; N S Geoghagen; E Cheng; R T Cline; Claire M Fraser-Liggett
Alanine scanning mutagenesis of conserved arginine/lysine-arginine/lysine-X-X-arginine/lysine G protein-activating motifs on m1 muscarinic acetylcholine receptors.
Molecular pharmacology 1996;50(1):140-8.
1996: S I Max; B A Chowdhury; Claire M Fraser-Liggett
Sequence analysis of the 5'-untranslated region of the human H1 histamine receptor-encoding gene.
Gene 1996;171(2):309-10.
1995: Claire M Fraser-Liggett; J D Gocayne; Owen R White; Mark D Adams; R A Clayton; Robert D Fleischmann; Carol Bult; A R Kerlavage; G Sutton; J M Kelley; R D Fritchman; J F Weidman; K V Small; M Sandusky; J Fuhrmann; D Nguyen; T R Utterback; D M Saudek; C A Phillips; J M Merrick; J F Tomb; B A Dougherty; Kenneth Bott; P C Hu; T S Lucier; S N Peterson; Hamilton O Smith; Clyde A Hutchison; J Craig Venter
The minimal gene complement of Mycoplasma genitalium.
Science (New York, N.Y.) 1995;270(5235):397-403.
1995: Claire M Fraser-Liggett
Structure and functional analysis of G protein-coupled receptors and potential diagnostic ligands.
Journal of nuclear medicine : official publication, Society of Nuclear Medicine 1995;36(6 Suppl):17S-21S.
1995: Claire M Fraser-Liggett; Norman H Lee
Regulation of muscarinic receptor expression by changes in mRNA stability.
Life sciences 1995;56(11-12):899-906.
1994: A L Buller; Gregg Hastings; E F Kirkness; Claire M Fraser-Liggett
Site-directed mutagenesis of N-linked glycosylation sites on the gamma-aminobutyric acid type A receptor alpha 1 subunit.
Molecular pharmacology 1994;46(5):858-65.
1994: N C Nicolaides; Nickolas Papadopoulos; B Liu; YF Wei; KC Carter; S M Ruben; C A Rosen; W A Haseltine; R D Fleischmann; Claire M Fraser-Liggett
Mutations of two PMS homologues in hereditary nonpolyposis colon cancer.
Nature 1994;371(6492):75-80.
1994: J A Dolan; H A Muenkel; M G Burns; S M Pellegrino; Claire M Fraser-Liggett; F Pietri; A D Strosberg; E E Largis; M D Dutia; J D Bloom
Beta-3 adrenoceptor selectivity of the dioxolane dicarboxylate phenethanolamines.
The Journal of pharmacology and experimental therapeutics 1994;269(3):1000-6.
1994: Mark D Adams; A R Kerlavage; J M Kelley; J D Gocayne; C Fields; Claire M Fraser-Liggett; J Craig Venter
A model for high-throughput automated DNA sequencing and analysis core facilities.
Nature 1994;368(6470):474-5.
1994: Nickolas Papadopoulos; N C Nicolaides; YF Wei; S M Ruben; KC Carter; C A Rosen; W A Haseltine; R D Fleischmann; Claire M Fraser-Liggett; Mark D Adams
Mutation of a mutL homolog in hereditary colon cancer.
Science (New York, N.Y.) 1994;263(5153):1625-9.
1994: Norman H Lee; J Earle-Hughes; Claire M Fraser-Liggett
Agonist-mediated destabilization of m1 muscarinic acetylcholine receptor mRNA. Elements involved in mRNA stability are localized in the 3'-untranslated region.
The Journal of biological chemistry 1994;269(6):4291-8.
1994: Claire M Fraser-Liggett; N H Lee; S M Pellegrino; A R Kerlavage
Molecular properties and regulation of G-protein-coupled receptors.
Progress in nucleic acid research and molecular biology 1994;49():113-56.
1993: N H Lee; Claire M Fraser-Liggett
Cross-talk between m1 muscarinic acetylcholine and beta 2-adrenergic receptors. cAMP and the third intracellular loop of m1 muscarinic receptors confer heterologous regulation.
The Journal of biological chemistry 1993;268(11):7949-57.
1993: E F Kirkness; Claire M Fraser-Liggett
A strong promoter element is located between alternative exons of a gene encoding the human gamma-aminobutyric acid-type A receptor beta 3 subunit (GABRB3).
The Journal of biological chemistry 1993;268(6):4420-8.
1992: Y Ogino; Claire M Fraser-Liggett; T Costa
Selective interaction of beta 2- and alpha 2-adrenergic receptors with stimulatory and inhibitory guanine nucleotide-binding proteins.
Molecular pharmacology 1992;42(1):6-9.
1992: T M Savarese; C D Wang; Claire M Fraser-Liggett
Site-directed mutagenesis of the rat m1 muscarinic acetylcholine receptor. Role of conserved cysteines in receptor function.
The Journal of biological chemistry 1992;267(16):11439-48.
1992: T M Savarese; Claire M Fraser-Liggett
In vitro mutagenesis and the search for structure-function relationships among G protein-coupled receptors.
The Biochemical journal 1992;283 ( Pt 1)():1-19.
1992: Patrick Muzzin; J P Revelli; Claire M Fraser-Liggett; Jean-Paul Giacobino
Radioligand binding studies of the atypical beta 3-adrenergic receptor in rat brown adipose tissue using [3H]CGP 12177.
FEBS letters 1992;298(2-3):162-4.
1991: Patrick Muzzin; J P Revelli; F Kuhne; J D Gocayne; W R McCombie; J Craig Venter; Jean-Paul Giacobino; Claire M Fraser-Liggett
An adipose tissue-specific beta-adrenergic receptor. Molecular cloning and down-regulation in obesity.
The Journal of biological chemistry 1991;266(35):24053-8.
1991: M Dean; S Lucas-Derse; A Bolos; Stephen J O'Brien; E F Kirkness; Claire M Fraser-Liggett; David Goldman
Genetic mapping of the beta 1 GABA receptor gene to human chromosome 4, using a tetranucleotide repeat polymorphism.
American journal of human genetics 1991;49(3):621-6.
1991: C D Wang; M A Buck; Claire M Fraser-Liggett
Site-directed mutagenesis of alpha 2A-adrenergic receptors: identification of amino acids involved in ligand binding and receptor activation by agonists.
Molecular pharmacology 1991;40(2):168-79.
1991: J P Revelli; R Pescini; Patrick Muzzin; Josiane Seydoux; M G Fitzgerald; Claire M Fraser-Liggett; Jean-Paul Giacobino
Changes in beta 1- and beta 2-adrenergic receptor mRNA levels in brown adipose tissue and heart of hypothyroid rats.
The Biochemical journal 1991;277 ( Pt 3)():625-9.
1991: Claire M Fraser-Liggett
Molecular biology of adrenergic receptors: model systems for the study of G-protein-mediated signal transduction.
Blood vessels 1991;28(1-3):93-103.
1990: M A Buck; Claire M Fraser-Liggett
Muscarinic acetylcholine receptor subtypes which selectively couple to phospholipase C: pharmacological and biochemical properties.
Biochemical and biophysical research communications 1990;173(2):666-72.
1990: J C Owicki; J W Parce; K M Kercso; G B Sigal; V C Muir; J C Venter; Claire M Fraser-Liggett; Harden M McConnell
Continuous monitoring of receptor-mediated changes in the metabolic rates of living cells.
Proceedings of the National Academy of Sciences of the United States of America 1990;87(10):4007-11.
1990: S Arakawa; J D Gocayne; W R McCombie; D A Urquhart; Linda M Hall; Claire M Fraser-Liggett; J Craig Venter
Cloning, localization, and permanent expression of a Drosophila octopamine receptor.
Neuron 1990;4(3):343-54.
1990: J Craig Venter; Claire M Fraser-Liggett
Receptor mechanisms. Structure and molecular biology of transmitter receptors.
The American review of respiratory disease 1990;141(3 Pt 2):S99-105.
1990: Claire M Fraser-Liggett; J Craig Venter
Beta-adrenergic receptors. Relationship of primary structure, receptor function, and regulation.
The American review of respiratory disease 1990;141(2 Pt 2):S22-30.
1989: Claire M Fraser-Liggett; C D Wang; D A Robinson; J D Gocayne; J Craig Venter
Site-directed mutagenesis of m1 muscarinic acetylcholine receptors: conserved aspartic acids play important roles in receptor function.
Molecular pharmacology 1989;36(6):840-7.
1989: T Onai; M G FitzGerald; S Arakawa; J D Gocayne; D A Urquhart; Linda M Hall; Claire M Fraser-Liggett; W R McCombie; J Craig Venter
Cloning, sequence analysis and chromosome localization of a Drosophila muscarinic acetylcholine receptor.
FEBS letters 1989;255(2):219-25.
1989: Claire M Fraser-Liggett; S Arakawa; W R McCombie; J Craig Venter
Cloning, sequence analysis, and permanent expression of a human alpha 2-adrenergic receptor in Chinese hamster ovary cells. Evidence for independent pathways of receptor coupling to adenylate cyclase attenuation and activation.
The Journal of biological chemistry 1989;264(20):11754-61.
1989: Claire M Fraser-Liggett
Site-directed mutagenesis of beta-adrenergic receptors. Identification of conserved cysteine residues that independently affect ligand binding and receptor activation.
The Journal of biological chemistry 1989;264(16):9266-70.
1989: J Craig Venter; Claire M Fraser-Liggett; A R Kerlavage; M A Buck
Molecular biology of adrenergic and muscarinic cholinergic receptors. A perspective.
Biochemical pharmacology 1989;38(8):1197-208.
1989: Lin Mei; Josephine Lai; William R Roeske; Claire M Fraser-Liggett; J C Venter; Henry I Yamamura
Pharmacological characterization of the M1 muscarinic receptors expressed in murine fibroblast B82 cells.
The Journal of pharmacology and experimental therapeutics 1989;248(2):661-70.
1988: Patrick Muzzin; Josiane Seydoux; Jean-Paul Giacobino; J C Venter; Claire M Fraser-Liggett
Discrepancies between the affinities of binding and action of the novel beta-adrenergic agonist BRL 37344 in rat brown adipose tissue.
Biochemical and biophysical research communications 1988;156(1):375-82.
1988: Claire M Fraser-Liggett; F Z Chung; C D Wang; J Craig Venter
Site-directed mutagenesis of human beta-adrenergic receptors: substitution of aspartic acid-130 by asparagine produces a receptor with high-affinity agonist binding that is uncoupled from adenylate cyclase.
Proceedings of the National Academy of Sciences of the United States of America 1988;85(15):5478-82.
1988: F Z Chung; C D Wang; Paul C Potter; J Craig Venter; Claire M Fraser-Liggett
Site-directed mutagenesis and continuous expression of human beta-adrenergic receptors. Identification of a conserved aspartate residue involved in agonist binding and receptor activation.
The Journal of biological chemistry 1988;263(9):4052-5.
1988: J Craig Venter; Claire M Fraser-Liggett; F Z Chung; A R Kerlavage; D A Robinson; J D Gocayne; M G FitzGerald
Cloning and expression of adrenergic and muscarinic cholinergic receptor genes.
Advances in experimental medicine and biology 1988;236():173-80.
1988: Patrick Muzzin; C Colomb; Jean-Paul Giacobino; J C Venter; Claire M Fraser-Liggett
Biochemical characterization of brown adipose tissue beta-adrenergic receptor.
Journal of receptor research 1988;8(5):713-29.
1988: J Craig Venter; U di Porzio; D A Robinson; S M Shreeve; Josephine Lai; A R Kerlavage; S P Fracek; K U Lentes; Claire M Fraser-Liggett
Evolution of neurotransmitter receptor systems.
Progress in neurobiology 1988;30(2-3):105-69.
1987: J Gocayne; D A Robinson; M G FitzGerald; F Z Chung; A R Kerlavage; K U Lentes; Josephine Lai; C D Wang; Claire M Fraser-Liggett; J Craig Venter
Primary structure of rat cardiac beta-adrenergic and muscarinic cholinergic receptors obtained by automated DNA sequence analysis: further evidence for a multigene family.
Proceedings of the National Academy of Sciences of the United States of America 1987;84(23):8296-300.
1987: Claire M Fraser-Liggett; F Z Chung; J Craig Venter
Continuous high density expression of human beta 2-adrenergic receptors in a mouse cell line previously lacking beta-receptors.
The Journal of biological chemistry 1987;262(31):14843-6.
1987: F Z Chung; K U Lentes; J Gocayne; M Fitzgerald; D Robinson; A R Kerlavage; Claire M Fraser-Liggett; J Craig Venter
Cloning and sequence analysis of the human brain beta-adrenergic receptor. Evolutionary relationship to rodent and avian beta-receptors and porcine muscarinic receptors.
FEBS letters 1987;211(2):200-6.
1987: Claire M Fraser-Liggett; A R Kerlavage; A P Mariani; J Craig Venter
Structural analysis of purified beta-adrenergic receptors.
Proteins 1987;2(1):34-41.
1986: A R Kerlavage; Claire M Fraser-Liggett; F Z Chung; J Craig Venter
Molecular structure and evolution of adrenergic and cholinergic receptors.
Proteins 1986;1(4):287-301.
1986: J C Venter; A R Kerlavage; Claire M Fraser-Liggett
Alpha and beta adrenergic and muscarinic cholinergic receptor structure.
Biochemical Society symposium 1986;52():1-22.
1985: J C Venter; Claire M Fraser-Liggett
Beta-adrenergic receptor structure, synthesis, antibodies and human disease.
Bulletin européen de physiopathologie respiratoire 1985;21(5):13s-18s.
1985: S M Shreeve; Claire M Fraser-Liggett; J C Venter
Molecular comparison of alpha 1- and alpha 2-adrenergic receptors suggests that these proteins are structurally related "isoreceptors".
Proceedings of the National Academy of Sciences of the United States of America 1985;82(14):4842-6.
1985: G Semenza; M Kessler; U Schmidt; J C Venter; Claire M Fraser-Liggett
The small-intestinal sodium-glucose cotransporter(s).
Annals of the New York Academy of Sciences 1985;456():83-96.
1984: Claire M Fraser-Liggett; J C Venter
Anti-receptor antibodies in human disease.
The Journal of allergy and clinical immunology 1984;74(5):661-73.
1984: Claire M Fraser-Liggett; J C Venter; J N Finkelstein; D L Shapiro
Monoclonal antibodies to surface antigens of rabbit type II pneumocytes.
The American review of respiratory disease 1984;130(3):505-7.
1984: J C Venter; P Horne; B Eddy; R Greguski; Claire M Fraser-Liggett
Alpha 1-adrenergic receptor structure.
Molecular pharmacology 1984;26(2):196-205.
1984: Claire M Fraser-Liggett; J C Venter
Autoantibodies to beta-adrenergic receptors and asthma.
The Journal of allergy and clinical immunology 1984;74(3 Pt 1):227-9.
1984: J C Venter; J A Berzofsky; J Lindstrom; S Jacobs; Claire M Fraser-Liggett; L D Kohn; W J Schneider; G L Greene; A D Strosberg; B F Erlanger
Monoclonal and anti-idiotypic antibodies as probes for receptor structure and function.
Federation proceedings 1984;43(10):2532-9.
1984: J C Venter; B Eddy; Linda M Hall; Claire M Fraser-Liggett
Monoclonal antibodies detect the conservation of muscarinic cholinergic receptor structure from Drosophila to human brain and detect possible structural homology with alpha 1-adrenergic receptors.
Proceedings of the National Academy of Sciences of the United States of America 1984;81(1):272-6.
1984: J C Venter; Claire M Fraser-Liggett
The structure and evolution of neurotransmitter receptors (alpha- and beta-adrenergic, dopaminergic and muscarinic cholinergic).
Advances in experimental medicine and biology 1984;175():271-88.
1983: J C Venter; J S Schaber; D C U'Prichard; Claire M Fraser-Liggett
Molecular size of the human platelet alpha 2-adrenergic receptor as determined by radiation inactivation.
Biochemical and biophysical research communications 1983;116(3):1070-5.
1983: U M Schmidt; B Eddy; Claire M Fraser-Liggett; J C Venter; G Semenza
Isolation of (a subunit of) the Na+/D-glucose cotransporter(s) of rabbit intestinal brush border membranes using monoclonal antibodies.
FEBS letters 1983;161(2):279-83.
1983: J C Venter; Claire M Fraser-Liggett; J S Schaber; C Y Jung; G Bolger; D J Triggle
Molecular properties of the slow inward calcium channel. Molecular weight determinations by radiation inactivation and covalent affinity labeling.
The Journal of biological chemistry 1983;258(15):9344-8.
1983: L Lilly; Claire M Fraser-Liggett; C Y Jung; Philip Seeman; J C Venter
Molecular size of the canine and human brain D2 dopamine receptor as determined by radiation inactivation.
Molecular pharmacology 1983;24(1):10-4.
1983: J C Venter; Claire M Fraser-Liggett
beta-Adrenergic receptor isolation and characterization with immobilized drugs and monoclonal antibodies.
Federation proceedings 1983;42(2):273-8.
1983: J C Venter; B Eddy; J S Schaber; L Lilly; Claire M Fraser-Liggett
Purification and molecular characterization of neurotransmitter receptors.
Progress in clinical and biological research 1983;135():183-206.
1983: Claire M Fraser-Liggett; R Greguski; B Eddy; J C Venter
Autoantibodies and monoclonal antibodies in the purification and molecular characterization of neurotransmitter receptors.
Journal of cellular biochemistry 1983;21(3):219-31.
1982: Claire M Fraser-Liggett; J C Venter
The size of the mammalian lung beta 2-adrenergic receptor as determined by target size analysis and immunoaffinity chromatography.
Biochemical and biophysical research communications 1982;109(1):21-9.
1982: Claire M Fraser-Liggett; J C Venter
Autoantibodies to beta 2-adrenergic receptors and allergic respiratory disease.
Survey of immunologic research 1982;1(4):365-70.
1982: L C Harrison; J Callaghan; J C Venter; Claire M Fraser-Liggett; M L Kaliner
Atopy, autonomic function and beta-adrenergic receptor autoantibodies.
Ciba Foundation symposium 1982;(90):248-62.
1981: Claire M Fraser-Liggett; J C Venter; M Kaliner
Autonomic abnormalities and autoantibodies to beta-adrenergic receptors.
The New England journal of medicine 1981;305(20):1165-70.
1981: J C Venter; Claire M Fraser-Liggett; A I Soiefer; D R Jeffrey; W L Strauss; R R Charlton; R Greguski
Autoantibodies and monoclonal antibodies to beta-adrenergic receptors: their use in receptor purification and characterization.
Advances in cyclic nucleotide research 1981;14():135-43.
1980: Claire M Fraser-Liggett; J C Venter
Monoclonal antibodies to beta-adrenergic receptors: use in purification and molecular characterization of beta receptors.
Proceedings of the National Academy of Sciences of the United States of America 1980;77(12):7034-8.
1980: Claire M Fraser-Liggett; J C Venter
The synthesis of beta-adrenergic receptors in cultured human lung cells: induction by glucocorticoids.
Biochemical and biophysical research communications 1980;94(1):390-7.
1980: J C Venter; Claire M Fraser-Liggett; L C Harrison
Autoantibodies to beta 2-adrenergic receptors: a possible cause of adrenergic hyporesponsiveness in allergic rhinitis and asthma.
Science (New York, N.Y.) 1980;207(4437):1361-3.
1980: Claire M Fraser-Liggett; J C Venter
Regulation of beta-adrenergic receptor density in the control of adrenergic responsiveness.
Progress in clinical and biological research 1980;42():127-44.
1979: W L Strauss; G Ghai; Claire M Fraser-Liggett; J C Venter
Detergent solubilization of mammalian cardiac and hepatic beta-adrenergic receptors.
Archives of biochemistry and biophysics 1979;196(2):566-73.
1974: M A Norcross; O H Siegmund; Claire M Fraser-Liggett
Amprolium for coccidiosis in cattle: a review of efficacy and safety.
Veterinary medicine, small animal clinician : VM, SAC 1974;69(4):459 passim.