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Tapas Mal

Research Profile

Genes & Molecular Sequences

Amino Acid Sequences

Concepts & Ideas

Procedures

Phenomena

Magnetic Resonance Spectroscopy

Chemicals & Drugs

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Escherichia coli

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Publications

TOP 3
Hideaki Mizuno; Tapas Mal; Markus Wälchli; Takashi Fukano; Mitsuhiko Ikura; Atsushi Miyawaki
Molecular basis of photochromism of a fluorescent protein revealed by direct 13C detection under laser illumination.
Hideaki Mizuno; Tapas Mal; Markus Wälchli; Akihiro Kikuchi; Takashi Fukano; Ryoko Ando; Jeyaraman Jeyakanthan; Junichiro Taka; Yoshitsugu Shiro; Mitsuhiko Ikura; Atsushi Miyawaki
Light-dependent regulation of structural flexibility in a photochromic fluorescent protein.
Jenny Chan; Andrew E Whitten; Cy M Jeffries; Ivan Bosanac; Tapas Mal; Jennifer Ito; Horea Porumb; Takayuki Michikawa; Katsuhiko Mikoshiba; Jill Trewhella; Mitsuhiko Ikura
Ligand-induced conformational changes via flexible linkers in the amino-terminal region of the inositol 1,4,5-trisphosphate receptor.

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All Publications

2010: Hideaki Mizuno; Tapas Mal; Markus Wälchli; Takashi Fukano; Mitsuhiko Ikura; Atsushi Miyawaki
Molecular basis of photochromism of a fluorescent protein revealed by direct 13C detection under laser illumination.
Journal of biomolecular NMR 2010;48(4):237-46.
2008: Hideaki Mizuno; Tapas Mal; Markus Wälchli; Akihiro Kikuchi; Takashi Fukano; Ryoko Ando; Jeyaraman Jeyakanthan; Junichiro Taka; Yoshitsugu Shiro; Mitsuhiko Ikura; Atsushi Miyawaki
Light-dependent regulation of structural flexibility in a photochromic fluorescent protein.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(27):9227-32.
2007: Jenny Chan; Andrew E Whitten; Cy M Jeffries; Ivan Bosanac; Tapas Mal; Jennifer Ito; Horea Porumb; Takayuki Michikawa; Katsuhiko Mikoshiba; Jill Trewhella; Mitsuhiko Ikura
Ligand-induced conformational changes via flexible linkers in the amino-terminal region of the inositol 1,4,5-trisphosphate receptor.
Journal of molecular biology 2007;373(5):1269-80.
2007: Tapas Mal; Shinya Takahata; Sewon Ki; Le Zheng; Tetsuro Kokubo; Mitsuhiko Ikura
Functional silencing of TATA-binding protein (TBP) by a covalent linkage of the N-terminal domain of TBP-associated factor 1.
The Journal of biological chemistry 2007;282(30):22228-38.
2006: Guang-Yao Li; Yonglong Zhang; Mitchell C Y Chan; Tapas Mal; Klaus P Hoeflich; Masayori Inouye; Mitsuhiko Ikura
Characterization of dual substrate binding sites in the homodimeric structure of Escherichia coli mRNA interferase MazF.
Journal of molecular biology 2006;357(1):139-50.
2005: Tapas Mal; Dingjiang Liu; Yutaka Masutomi; Le Zheng; Yoshihiro Nakatani; Tetsuro Kokubo; Mitsuhiko Ikura
Resonance assignments of 30 kDa complexes of TFIID subunit TAF1 with TATA-binding protein.
Journal of biomolecular NMR 2005;33(1):76.
2005: Ikuko Hayashi; Andrew Wilde; Tapas Mal; Mitsuhiko Ikura
Structural basis for the activation of microtubule assembly by the EB1 and p150Glued complex.
Molecular cell 2005;19(4):449-60.
2004: Guoliang Qing; Li-Chung Ma; Ahmad Khorchid; G V T Swapna; Tapas Mal; Masanori Mitta Takayama; Bing Xia; Sangita Phadtare; Haiping Ke; Thomas B Acton; Gaetano T Montelione; Mitsuhiko Ikura; Masayori Inouye
Cold-shock induced high-yield protein production in Escherichia coli.
Nature biotechnology 2004;22(7):877-82.
2004: Tapas Mal; Yutaka Masutomi; Le Zheng; Yasuto Nakata; Hiroshi Ohta; Yoshihiro Nakatani; Tetsuro Kokubo; Mitsuhiko Ikura
Structural and functional characterization on the interaction of yeast TFIID subunit TAF1 with TATA-binding protein.
Journal of molecular biology 2004;339(4):681-93.
2004: Mahua Ghosh; Laura M Elsby; Tapas Mal; Jane M Gooding; Stefan G E Roberts; Mitsuhiko Ikura
Probing Zn2+-binding effects on the zinc-ribbon domain of human general transcription factor TFIIB.
The Biochemical journal 2004;378(Pt 2):317-24.
2003: Richard D Brokx; Leigh Revers; Qinghong Zhang; Shaoxian Yang; Tapas Mal; Mitsuhiko Ikura; Jean Gariépy
Nuclear magnetic resonance-based dissection of a glycosyltransferase specificity for the mucin MUC1 tandem repeat.
Biochemistry 2003;42(47):13817-25.
2003: Hideaki Mizuno; Tapas Mal; Kit I Tong; Ryoko Ando; Toshiaki Furuta; Mitsuhiko Ikura; Atsushi Miyawaki
Photo-induced peptide cleavage in the green-to-red conversion of a fluorescent protein.
Molecular cell 2003;12(4):1051-8.
2003: Kyoko L Yap; Tao Yuan; Tapas Mal; Hans J Vogel; Mitsuhiko Ikura
Structural basis for simultaneous binding of two carboxy-terminal peptides of plant glutamate decarboxylase to calmodulin.
Journal of molecular biology 2003;328(1):193-204.
2002: Ivan Bosanac; Jean-René Alattia; Tapas Mal; Jenny Chan; Susanna Talarico; Frances K Tong; Kit I Tong; Fumio Yoshikawa; Teiichi Furuichi; Miwako Iwai; Takayuki Michikawa; Katsuhiko Mikoshiba; Mitsuhiko Ikura
Structure of the inositol 1,4,5-trisphosphate receptor binding core in complex with its ligand.
Nature 2002;420(6916):696-700.
2002: Tapas Mal; Mitsuhiko Ikura; Lewis E Kay
The ATCUN domain as a probe of intermolecular interactions: application to calmodulin-peptide complexes.
Journal of the American Chemical Society 2002;124(47):14002-3.
2002: Tapas Mal; Nikolai R Skrynnikov; Kyoko L Yap; Lewis E Kay; Mitsuhiko Ikura
Detecting protein kinase recognition modes of calmodulin by residual dipolar couplings in solution NMR.
Biochemistry 2002;41(43):12899-906.
2002: Mona Abu-Abed; Tapas Mal; Masatsune Kainosho; David H MacLennan; Mitsuhiko Ikura
Characterization of the ATP-binding domain of the sarco(endo)plasmic reticulum Ca(2+)-ATPase: probing nucleotide binding by multidimensional NMR.
Biochemistry 2002;41(4):1156-64.
2002: Tapas Mal; Stefan Bagby; Mitsuhiko Ikura
Protein structure calculation from NMR data.
Methods in molecular biology (Clifton, N.J.) 2002;173():267-83.
2001: Kevin Truong; Asako Sawano; H Mizuno; H Hama; Kit I Tong; Tapas Mal; Atsushi Miyawaki; Mitsuhiko Ikura
FRET-based in vivo Ca2+ imaging by a new calmodulin-GFP fusion molecule.
Nature structural biology 2001;8(12):1069-73.
2001: Zoltan Gombos; A Jeromin; Tapas Mal; Avijit Chakrabartty; Mitsuhiko Ikura
Calexcitin B is a new member of the sarcoplasmic calcium-binding protein family.
The Journal of biological chemistry 2001;276(25):22529-36.
2000: Stefan Bagby; Tapas Mal; D Liu; E Raddatz; Yoshihiro Nakatani; Mitsuhiko Ikura
TFIIA-TAF regulatory interplay: NMR evidence for overlapping binding sites on TBP.
FEBS letters 2000;468(2-3):149-54.
1998: Tapas Mal; S J Matthews; Helena Kovacs; Iain D Campbell; Jonathan Boyd
Some NMR experiments and a structure determination employing a [15N,2H] enriched protein.
Journal of biomolecular NMR 1998;12(2):259-76.
1997: Jonathan Boyd; Tapas Mal; N Soffe; Iain D Campbell
The influence of a scalar-coupled deuterium upon the relaxaton of a 15N Nucleus and its possible exploitation as a probe for side-chain interactions in proteins.
Journal of magnetic resonance (San Diego, Calif. : 1997) 1997;124(1):61-71.
1995: A Gupta; Tapas Mal; N Jayasuryan; Virander S Chauhan
Assignment of disulphide bonds in the X protein (HBx) of hepatitis B virus.
Biochemical and biophysical research communications 1995;212(3):919-24.
1995: K R Rajashankar; Suryanarayanarao Ramakumar; Tapas Mal; R M Jain; V S Chauhan
Synthesis, and crystal and molecular structure of the 3(10)-helical alpha,beta-dehydro pentapeptide Boc-Leu-Phe-Ala-delta Phe-Leu-OMe.
Biopolymers 1995;35(2):141-7.