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Tahir Tahirov

Research Profile

Procedures

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Publications

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Irina S-R Waisertreiger; Igor B Rogozin; Elena I Stepchenkova; Tahir Tahirov; Hyun-Min Kim; Victoria G Liston; Kirill S Lobachev; Miriam R Menezes; Youri I Pavlov
Modulation of mutagenesis in eukaryotes by DNA replication fork dynamics and quality of nucleotide pools.
Andrey G Baranovskiy; Artem G Lada; Youri I Pavlov; Hollie M Siebler; Yinbo Zhang; Tahir Tahirov
DNA polymerase δ and ζ switch by sharing accessory subunits of DNA polymerase δ.
Tahir Tahirov
Structure and Function of Eukaryotic DNA Polymerase δ.

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All Publications

2012: Irina S-R Waisertreiger; Igor B Rogozin; Elena I Stepchenkova; Tahir Tahirov; Hyun-Min Kim; Victoria G Liston; Kirill S Lobachev; Miriam R Menezes; Youri I Pavlov
Modulation of mutagenesis in eukaryotes by DNA replication fork dynamics and quality of nucleotide pools.
Environmental and molecular mutagenesis 2012;53(9):699-724.
2012: Andrey G Baranovskiy; Artem G Lada; Youri I Pavlov; Hollie M Siebler; Yinbo Zhang; Tahir Tahirov
DNA polymerase δ and ζ switch by sharing accessory subunits of DNA polymerase δ.
The Journal of biological chemistry 2012;287(21):17281-7.
2012: Tahir Tahirov
Structure and Function of Eukaryotic DNA Polymerase δ.
Sub-cellular biochemistry 2012;62():217-36.
2012: Nigar D Babayeva; Oxana I Baranovskaya; Tahir Tahirov
Structural basis of Ets1 cooperative binding to widely separated sites on promoter DNA.
PloS one 2012;7(3):e33698.
2011: Vinod B Agarkar; Nigar D Babayeva; Youri I Pavlov; Tahir Tahirov
Crystal structure of the C-terminal domain of human DNA primase large subunit: implications for the mechanism of the primase-polymerase α switch.
Cell cycle (Georgetown, Tex.) 2011;10(6):926-31.
2010: Nigar D Babayeva; Phillip J Wilder; Masaaki Shiina; Koshiki Mino; Michelle Desler; Kazuhiro Ogata; Angie Rizzino; Tahir Tahirov
Structural basis of Ets1 cooperative binding to palindromic sequences on stromelysin-1 promoter DNA.
Cell cycle (Georgetown, Tex.) 2010;9(15):3054-62.
2010: Tahir Tahirov; Nigar D Babayeva; Katayoun Varzavand; Jeffrey J Cooper; Stanley C Sedore; David H Price
Crystal structure of HIV-1 Tat complexed with human P-TEFb.
Nature 2010;465(7299):747-51.
2010: Vinod B Agarkar; Nigar D Babayeva; Phillip J Wilder; Angie Rizzino; Tahir Tahirov
Crystal structure of mouse Elf3 C-terminal DNA-binding domain in complex with type II TGF-beta receptor promoter DNA.
Journal of molecular biology 2010;397(1):278-89.
2009: Vinod B Agarkar; Nigar D Babayeva; Angie Rizzino; Tahir Tahirov
Preliminary crystallographic analysis of mouse Elf3 C-terminal DNA-binding domain in complex with type II TGF-beta receptor promoter DNA.
Acta crystallographica. Section F, Structural biology and crystallization communications 2009;65(Pt 12):1261-3.
2009: Javier Sanchez Garcia; Andrey G Baranovskiy; Elena V Knatko; Fiona C Gray; Tahir Tahirov; Stuart A MacNeill
Functional mapping of the fission yeast DNA polymerase delta B-subunit Cdc1 by site-directed and random pentapeptide insertion mutagenesis.
BMC molecular biology 2009;10():82.
2009: Tahir Tahirov; Kira S Makarova; Igor Rogozin; Youri I Pavlov; Eugene V Koonin
Evolution of DNA polymerases: an inactivated polymerase-exonuclease module in Pol epsilon and a chimeric origin of eukaryotic polymerases from two classes of archaeal ancestors.
Biology direct 2009;4():11.
2008: Andrey G Baranovskiy; Nigar D Babayeva; Victoria G Liston; Igor Rogozin; Eugene V Koonin; Youri I Pavlov; Dmitry G Vassylyev; Tahir Tahirov
X-ray structure of the complex of regulatory subunits of human DNA polymerase delta.
Cell cycle (Georgetown, Tex.) 2008;7(19):3026-36.
2008: Andrey G Baranovskiy; Nigar D Babayeva; Youri I Pavlov; Tahir Tahirov
Crystallization and preliminary crystallographic analysis of the complex of the second and third regulatory subunits of human Pol delta.
Acta crystallographica. Section F, Structural biology and crystallization communications 2008;64(Pt 9):822-4.
2007: Dmitry G Vassylyev; Marina N Vassylyeva; Anna Perederina; Tahir Tahirov; Irina Artsimovitch
Structural basis for transcription elongation by bacterial RNA polymerase.
Nature 2007;448(7150):157-62.
2007: Eiji Inagaki; Noriyasu Ohshima; Keiko Sakamoto; Nigar D Babayeva; Hiroaki Kato; Shigeyuki Yokoyama; Tahir Tahirov
New insights into the binding mode of coenzymes: structure of Thermus thermophilus Delta1-pyrroline-5-carboxylate dehydrogenase complexed with NADP+.
Acta crystallographica. Section F, Structural biology and crystallization communications 2007;63(Pt 6):462-5.
2006: Dmitry G Vassylyev; Hiroyuki Mori; Marina N Vassylyeva; Tomoya Tsukazaki; Yoshiaki Kimura; Tahir Tahirov; Koreaki Ito
Crystal structure of the translocation ATPase SecA from Thermus thermophilus reveals a parallel, head-to-head dimer.
Journal of molecular biology 2006;364(3):248-58.
2006: Eiji Inagaki; Noriyasu Ohshima; Hitomi Takahashi; Chizu Kuroishi; Shigeyuki Yokoyama; Tahir Tahirov
Crystal structure of Thermus thermophilus Delta1-pyrroline-5-carboxylate dehydrogenase.
Journal of molecular biology 2006;362(3):490-501.
2006: Marina N Vassylyeva; Hiroyuki Mori; Tomoya Tsukazaki; Shigeyuki Yokoyama; Tahir Tahirov; Koreaki Ito; Dmitry G Vassylyev
Cloning, expression, purification, crystallization and initial crystallographic analysis of the preprotein translocation ATPase SecA from Thermus thermophilus.
Acta crystallographica. Section F, Structural biology and crystallization communications 2006;62(Pt 9):909-12.
2006: Ekaterina Kashkina; Michael Anikin; Tahir Tahirov; Sergei N Kochetkov; Dmitry G Vassylyev; Dmitry Temiakov
Elongation complexes of Thermus thermophilus RNA polymerase that possess distinct translocation conformations.
Nucleic acids research 2006;34(14):4036-45.
2005: Peter H Rehse; Maki Kumei; Tahir Tahirov
Compact reduced thioredoxin structure from the thermophilic bacteria Thermus thermophilus.
Proteins 2005;61(4):1032-7.
2005: Peter H Rehse; Tahir Tahirov
Crystal structure of a purine/pyrimidine phosphoribosyltransferase-related protein from Thermus thermophilus HB8.
Proteins 2005;61(3):658-65.
2005: Dmitry Temiakov; Nikolay Zenkin; Marina N Vassylyeva; Anna Perederina; Tahir Tahirov; Ekaterina Kashkina; Maria Savkina; Savva Zorov; Vadim Nikiforov; Noriyuki Igarashi; Naohiro Matsugaki; Soichi Wakatsuki; Konstantin Severinov; Dmitry G Vassylyev
Structural basis of transcription inhibition by antibiotic streptolydigin.
Molecular cell 2005;19(5):655-66.
2005: Peter H Rehse; Tahir Tahirov
Structure of a putative 2'-5' RNA ligase from Pyrococcus horikoshii.
Acta crystallographica. Section D, Biological crystallography 2005;61(Pt 9):1207-12.
2005: Irina Artsimovitch; Marina N Vassylyeva; Dmitri Svetlov; Vladimir Svetlov; Anna Perederina; Noriyuki Igarashi; Naohiro Matsugaki; Soichi Wakatsuki; Tahir Tahirov; Dmitry G Vassylyev
Allosteric modulation of the RNA polymerase catalytic reaction is an essential component of transcription control by rifamycins.
Cell 2005;122(3):351-63.
2005: Peter H Rehse; Tomoe Kitao; Tahir Tahirov
Structure of a closed-form uroporphyrinogen-III C-methyltransferase from Thermus thermophilus.
Acta crystallographica. Section D, Biological crystallography 2005;61(Pt 7):913-9.
2005: Eiji Inagaki; Hitomi Takahashi; Chizu Kuroishi; Tahir Tahirov
Crystallization and avoiding the problem of hemihedral twinning in crystals of Delta1-pyrroline-5-carboxylate dehydrogenase from Thermus thermophilus.
Acta crystallographica. Section F, Structural biology and crystallization communications 2005;61(Pt 6):609-11.
2005: Peter T Chivers; Tahir Tahirov
Structure of Pyrococcus horikoshii NikR: nickel sensing and implications for the regulation of DNA recognition.
Journal of molecular biology 2005;348(3):597-607.
2005: Jeyaraman Jeyakanthan; Eiji Inagaki; Chizu Kuroishi; Tahir Tahirov
Structure of PIN-domain protein PH0500 from Pyrococcus horikoshii.
Acta crystallographica. Section F, Structural biology and crystallization communications 2005;61(Pt 5):463-8.
2005: Tomoe Kitao; Chizu Kuroishi; Tahir Tahirov
Crystallization and preliminary crystallographic analysis of the nickel-responsive regulator NikR from Pyrococcus horikoshii.
Acta crystallographica. Section F, Structural biology and crystallization communications 2005;61(Pt 1):43-5.
2004: Peter H Rehse; Chizu Kuroishi; Tahir Tahirov
Structure of the RNA-processing inhibitor RraA from Thermus thermophilis.
Acta crystallographica. Section D, Biological crystallography 2004;60(Pt 11):1997-2002.
2004: Hitomi Takahashi; Eiji Inagaki; Chizu Kuroishi; Tahir Tahirov
Structure of the Thermus thermophilus putative periplasmic glutamate/glutamine-binding protein.
Acta crystallographica. Section D, Biological crystallography 2004;60(Pt 10):1846-54.
2004: Anna Perederina; Vladimir Svetlov; Marina N Vassylyeva; Tahir Tahirov; Shigeyuki Yokoyama; Irina Artsimovitch; Dmitry G Vassylyev
Regulation through the secondary channel--structural framework for ppGpp-DksA synergism during transcription.
Cell 2004;118(3):297-309.
2004: Noriyasu Ohshima; Eiji Inagaki; Kiyonori Yasuike; Koji Takio; Tahir Tahirov
Structure of Thermus thermophilus 2-Keto-3-deoxygluconate kinase: evidence for recognition of an open chain substrate.
Journal of molecular biology 2004;340(3):477-89.
2004: Peter H Rehse; Noriyasu Ohshima; Yuichi Nodake; Tahir Tahirov
Crystallographic structure and biochemical analysis of the Thermus thermophilus osmotically inducible protein C.
Journal of molecular biology 2004;338(5):959-68.
2004: Tahir Tahirov; Eiji Inagaki; Noriyasu Ohshima; Tomoe Kitao; Chizu Kuroishi; Yoko Ukita; Koji Takio; Masanori Kobayashi; Seiki Kuramitsu; Shigeyuki Yokoyama; Masashi Miyano
Crystal structure of purine nucleoside phosphorylase from Thermus thermophilus.
Journal of molecular biology 2004;337(5):1149-60.
2004: Eiji Inagaki; Yoko Ukita; Maki Kumei; Yasuhiro Kajihara; Tahir Tahirov
Crystallization and preliminary crystallographic analysis of 2-keto-3-deoxygluconate kinase from Thermus thermophilus.
Acta crystallographica. Section D, Biological crystallography 2004;60(Pt 4):761-3.
2004: Peter H Rehse; Yuichi Nodake; Chizu Kuroishi; Tahir Tahirov
Expression, purification, crystallization and preliminary crystallographic analysis of osmotically inducible protein C.
Acta crystallographica. Section D, Biological crystallography 2004;60(Pt 2):357-8.
2004: Hitomi Takahashi; Eiji Inagaki; Yayoi Fujimoto; Chizu Kuroishi; Yuichi Nodake; Yuki Nakamura; Fumio Arisaka; Katsuhide Yutani; Seiki Kuramitsu; Shigeyuki Yokoyama; Masaki Yamamoto; Masashi Miyano; Tahir Tahirov
Structure and implications for the thermal stability of phosphopantetheine adenylyltransferase from Thermus thermophilus.
Acta crystallographica. Section D, Biological crystallography 2004;60(Pt 1):97-104.
2003: Kazuhiro Ogata; Ko Sato; Tahir Tahirov; Tahir Tahirov
Eukaryotic transcriptional regulatory complexes: cooperativity from near and afar.
Current opinion in structural biology 2003;13(1):40-8.
2003: Dmitry Temiakov; Tahir Tahirov; Michael Anikin; William T McAllister; Dmitry G Vassylyev; Shigeyuki Yokoyama
Crystallization and preliminary crystallographic analysis of T7 RNA polymerase elongation complex.
Acta crystallographica. Section D, Biological crystallography 2003;59(Pt 1):185-7.
2002: Tahir Tahirov; Dmitry Temiakov; Michael Anikin; Vsevolod Patlan; William T McAllister; Dmitry G Vassylyev; Shigeyuki Yokoyama
Structure of a T7 RNA polymerase elongation complex at 2.9 A resolution.
Nature 2002;420(6911):43-50.
2002: Tahir Tahirov; Ko Sato; Emi Ichikawa-Iwata; Motoko Sasaki; Taiko Inoue-Bungo; Masaaki Shiina; Kazumi Kimura; Shioka Takata; Atsushi Fujikawa; Hisayuki Morii; Takashi Kumasaka; Masaki Yamamoto; Shunsuke Ishii; Kazuhiro Ogata
Mechanism of c-Myb-C/EBP beta cooperation from separated sites on a promoter.
Cell 2002;108(1):57-70.
2001: Tahir Tahirov; Motoko Sasaki; Taiko Inoue-Bungo; Atsushi Fujikawa; Ko Sato; Takashi Kumasaka; Masaki Yamamoto; Kazuhiro Ogata
Crystals of ternary protein-DNA complexes composed of DNA-binding domains of c-Myb or v-Myb, C/EBPalpha or C/EBPbeta and tom-1A promoter fragment.
Acta crystallographica. Section D, Biological crystallography 2001;57(Pt 11):1655-8.
2001: Tahir Tahirov; Taiko Inoue-Bungo; Motoko Sasaki; Atsushi Fujikawa; Kazumi Kimura; Ko Sato; S Adachi; N Kamiya; Kazuhiro Ogata
Crystallization and preliminary X-ray analysis of the C/EBPbeta C-terminal region in complex with DNA.
Acta crystallographica. Section D, Biological crystallography 2001;57(Pt 6):854-6.
2001: Tahir Tahirov; Taiko Inoue-Bungo; Motoko Sasaki; Masaaki Shiina; Kazumi Kimura; Ko Sato; Takashi Kumasaka; Masaki Yamamoto; N Kamiya; Kazuhiro Ogata
Crystallization and preliminary X-ray analyses of quaternary, ternary and binary protein-DNA complexes with involvement of AML1/Runx-1/CBFalpha Runt domain, CBFbeta and the C/EBPbeta bZip region.
Acta crystallographica. Section D, Biological crystallography 2001;57(Pt 6):850-3.
2001: Tahir Tahirov; Taiko Inoue-Bungo; Hisayuki Morii; Atsushi Fujikawa; Motoko Sasaki; Kazumi Kimura; Masaaki Shiina; Ko Sato; Takashi Kumasaka; Masaki Yamamoto; Shunsuke Ishii; Kazuhiro Ogata
Structural analyses of DNA recognition by the AML1/Runx-1 Runt domain and its allosteric control by CBFbeta.
Cell 2001;104(5):755-67.
1999: Tahir Tahirov; Hisayuki Morii; Hatsuho Uedaira; Akinori Sarai; Kazuhiro Ogata
Crystallization and preliminary X-ray analysis of wild-type and V103L mutant Myb R2 DNA-binding domain.
Acta crystallographica. Section D, Biological crystallography 1999;55(Pt 7):1345-7.
1998: Tahir Tahirov; H Oki; Tomitake Tsukihara; Kyoko Ogasahara; Katsuhide Yutani; K Ogata; Y Izu; Susumu Tsunasawa; Ikunoshin Kato
Crystal structure of methionine aminopeptidase from hyperthermophile, Pyrococcus furiosus.
Journal of molecular biology 1998;284(1):101-24.
1998: Tahir Tahirov; H Oki; Tomitake Tsukihara; Kyoko Ogasahara; Katsuhide Yutani; C P Libeu; Y Izu; Susumu Tsunasawa; Ikunoshin Kato
High-resolution crystals of methionine aminopeptidase from Pyrococcus furiosus obtained by water-mediated transformation.
Journal of structural biology 1998;121(1):68-72.
1997: Tahir Tahirov; H Oki; Tomitake Tsukihara; Kyoko Ogasahara; Y Izu; Susumu Tsunasawa; Ikunoshin Kato; Katsuhide Yutani
Crystallization and preliminary X-ray analysis of methionine aminopeptidase from the hyperthermophilic bacterium Pyrococcus furiosus.
Acta crystallographica. Section D, Biological crystallography 1997;53(Pt 6):798-801.
1997: Tahir Tahirov; S Misaki; T E Meyer; M A Cusanovich; Yoshiki Higuchi; Noritake Yasuoka
Structure of cytochrome c' from Rhodobacter capsulatus strain St Louis: an unusual molecular association induced by bridging Zn ions.
Acta crystallographica. Section D, Biological crystallography 1997;53(Pt 6):658-64.
1996: Tahir Tahirov; S Misaki; T E Meyer; M A Cusanovich; Yoshiki Higuchi; Noritake Yasuoka
High-resolution crystal structures of two polymorphs of cytochrome c' from the purple phototrophic bacterium rhodobacter capsulatus.
Journal of molecular biology 1996;259(3):467-79.
1996: Tahir Tahirov; S Misaki; T E Meyer; M A Cusanovich; Yoshiki Higuchi; Noritake Yasuoka
Concerted movement of side chains in the haem vicinity observed on ligand binding in cytochrome c' from rhodobacter capsulatus.
Nature structural biology 1996;3(5):459-64.
1995: Tahir Tahirov; T H Lu; Y C Liaw; Y L Chen; J Y Lin
Crystal structure of abrin-a at 2.14 A.
Journal of molecular biology 1995;250(3):354-67.
1994: Tahir Tahirov; T H Lu; Y C Liaw; S C Chu; J Y Lin
A new crystal form of abrin-a from the seeds of Abrus precatorius.
Journal of molecular biology 1994;235(3):1152-3.