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Jeffrey M. Trent

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David Craig; Francisco M De La Vega; Jennifer Dinh; Linh Hoang; Tyler Izatt; Jeffrey A Kiefer; Julie Koeman; Ahmet Kurdoglu; Tracy M Moses; Spyro Mousses; Cynthia R Osborne; Joyce A O'Shaughnessy; Onur Sakarya; Bodour Salhia; Asim Siddiqui; Shripad Sinari; Anthony W Tolcher; Jeffrey M. Trent; Daniel Von Hoff; Shukmei Wong; Cristi L Aitelli; Jessica Aldrich; Angela Baker; Catalin Barbacioru; Paul R Billings; Joanne L Blum; Alexis Christoforides; John D Carpten
Genome and transcriptome sequencing in prospective metastatic triple-negative breast cancer uncovers therapeutic vulnerabilities.
Toni Farley; Jeff Kiefer; Preston Lee; Jeffrey M. Trent; Daniel Von Hoff; Charles Colbourn; Spyro Mousses
The BioIntelligence Framework: a new computational platform for biomedical knowledge computing.
A Karim Kader; Seong-Tae Kim; Brian R Lane; John D McConnell; Deborah A Meyers; Paul J Newcombe; Greg T Platek; Brian H Reck; Roger S Rittmaster; Colin F Spraggs; Jielin Sun; Sha Tao; Frank M Torti; Jeffrey M. Trent; Aubrey R Turner; John C Whittaker; Eugene R Bleecker; Lynn D Condreay; Ralph B D'Agostino; Fang-Chi Hsu; William B Isaacs; Zheng Zhang; S Lilly Zheng; Jianfeng Xu
Potential impact of adding genetic markers to clinical parameters in predicting prostate biopsy outcomes in men following an initial negative biopsy: findings from the REDUCE trial.

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2013: David Craig; Francisco M De La Vega; Jennifer Dinh; Linh Hoang; Tyler Izatt; Jeffrey A Kiefer; Julie Koeman; Ahmet Kurdoglu; Tracy M Moses; Spyro Mousses; Cynthia R Osborne; Joyce A O'Shaughnessy; Onur Sakarya; Bodour Salhia; Asim Siddiqui; Shripad Sinari; Anthony W Tolcher; Jeffrey M. Trent; Daniel Von Hoff; Shukmei Wong; Cristi L Aitelli; Jessica Aldrich; Angela Baker; Catalin Barbacioru; Paul R Billings; Joanne L Blum; Alexis Christoforides; John D Carpten
Genome and transcriptome sequencing in prospective metastatic triple-negative breast cancer uncovers therapeutic vulnerabilities.
Molecular cancer therapeutics 2013;12(1):104-16.
2013: Toni Farley; Jeff Kiefer; Preston Lee; Jeffrey M. Trent; Daniel Von Hoff; Charles Colbourn; Spyro Mousses
The BioIntelligence Framework: a new computational platform for biomedical knowledge computing.
Journal of the American Medical Informatics Association : JAMIA 2013;20(1):128-33.
2012: A Karim Kader; Seong-Tae Kim; Brian R Lane; John D McConnell; Deborah A Meyers; Paul J Newcombe; Greg T Platek; Brian H Reck; Roger S Rittmaster; Colin F Spraggs; Jielin Sun; Sha Tao; Frank M Torti; Jeffrey M. Trent; Aubrey R Turner; John C Whittaker; Eugene R Bleecker; Lynn D Condreay; Ralph B D'Agostino; Fang-Chi Hsu; William B Isaacs; Zheng Zhang; S Lilly Zheng; Jianfeng Xu
Potential impact of adding genetic markers to clinical parameters in predicting prostate biopsy outcomes in men following an initial negative biopsy: findings from the REDUCE trial.
European urology 2012;62(6):953-61.
2012: Karin Wadt; Jiyeon Choi; Joon-Yong Chung; Krzysztof T Drzewiecki; Anne-Marie Gerdes; Nicholas K Hayward; Steffen Heegaard; Stephen M Hewitt; Jens Kiilgaard; Jeffrey M. Trent; Kevin M Brown
A cryptic BAP1 splice mutation in a family with uveal and cutaneous melanoma, and paraganglioma.
Pigment cell & melanoma research 2012;25(6):815-8.
2012: Xiaobo Yang; Haiying Zhang; Shijun Zhang; Zengfeng Zhang; S Lilly Zheng; Zhuo Chen; Junjie Feng; Yong Gao; Yanling Hu; Xianghua Huang; Zhang Huang; Seong-Tae Kim; Li Li; Zhengjia Liang; Ming Liao; Xiaoling Lin; Ming Liu; Qian Liu; Linjian Mo; Tao Peng; Xue Qin; Deyi Shi; Jielin Sun; Aihua Tan; Minzhong Tang; Sha Tao; Jeffrey M. Trent; Jianfeng Xu; Zengnan Mo
Genome-wide association study for serum complement C3 and C4 levels in healthy Chinese subjects.
PLoS genetics 2012;8(9):e1002916.
2012: Xiaoling Lin; Daru Lu; Linjian Mo; Zengnan Mo; Tao Peng; Xue Qin; Junjie Feng; Yong Gao; Yanling Hu; Seong-Tae Kim; Li Li; Aihua Tan; Sha Tao; Jeffrey M. Trent; Jianfeng Xu; Xiaobo Yang; Haiying Zhang; Shijun Zhang; S Lilly Zheng; Jielin Sun
Genome-wide association study identifies novel loci associated with serum level of vitamin B12 in Chinese men.
Human molecular genetics 2012;21(11):2610-7.
2012: Han Zhao; Junzhao Zhao; Xiaoming Zhao; Yueran Zhao; S Lilly Zheng; Shuhua Zou; Hong Chen; Qiang Ding; Junjie Feng; Xuan Gao; Ying Gao; Cuifang Hao; Jingmei Hu; Hong Jiang; Guangyu Li; Xiao Li; Xiaoling Lin; Jiayin Liu; Shaoming Lu; Jinglong Ma; Yingying Qin; Rong Shi; Jielin Sun; Yingpu Sun; Jeffrey M. Trent; Li Wang; Zhong Wang; Chengyan Xu; Jianfeng Xu; Li You; Bo Zhang; Haobo Zhang; Zi-Jiang Chen
A genome-wide association study reveals that variants within the HLA region are associated with risk for nonobstructive azoospermia.
American journal of human genetics 2012;90(5):900-6.
2012: Jianping Hua; Sonsoles Shack; Chao Sima; Edward A Smith; Jeffrey M. Trent; Lalitamba Alla; Milana Cypert; Edward R Dougherty; Gerald C Gooden; Michael Bittner
Tracking transcriptional activities with high-content epifluorescent imaging.
Journal of biomedical optics 2012;17(4):046008.
2012: Aihua Tan; Sha Tao; Jeffrey M. Trent; Ning Xia; Xiaobo Yang; Haiying Zhang; Shijun Zhang; S Lilly Zheng; Qiang Ding; Yong Gao; Yanling Hu; Xianghua Huang; Zhang Huang; Seong-Tae Kim; Li Li; Zhengjia Liang; Xiaoling Lin; Ming Liu; Linjian Mo; Zengnan Mo; Tao Peng; Xue Qin; Deyi Shi; Jielin Sun; Jianfeng Xu
A genome-wide association and gene-environment interaction study for serum triglycerides levels in a healthy Chinese male population.
Human molecular genetics 2012;21(7):1658-64.
2012: Yizhen Lu; Edward Suh; Jielin Sun; Jishan Sun; Jeffrey M. Trent; Zheng Zhang; S Lilly Zheng; Yi Zhu; Kevin Campbell; John D Carpten; Latchezar Dimitrov; David Duggan; Junjie Feng; Henrik Gronberg; William B Isaacs; Tao Jin; Andrew K Kader; Jin-Woo Kim; Seong-Tae Kim; Wennuan Liu; James Lowey; Daru Lu; Jianfeng Xu
Association of prostate cancer risk with SNPs in regions containing androgen receptor binding sites captured by ChIP-On-chip analyses.
The Prostate 2012;72(4):376-85.
2012: Mitchell S Stark; Nanyun Tang; Jeffrey M. Trent; Sonika Tyagi; Susan L Woods; YuanQing Wu; Hongwei Yin; David Youngkin; Victoria Zismann; Lauren G Aoude; Vanessa F Bonazzi; Bradford R Brooks; Kevin M Brown; Donald Chow; Ken Dutton-Regester; Jonathan J Ellis; Michael Gartside; Richard Gibbs; Bostjan Kobe; Catherine Lanagan; Jeffrey P MacKeigan; Donna M Muzny; Irene Newsham; Natalie M Niemi; Jane M Palmer; Thomas Pollak; Jeffrey Reid; Christopher W Schmidt; Chris Sereduk; Nicholas K Hayward
Frequent somatic mutations in MAP3K5 and MAP3K9 in metastatic melanoma identified by exome sequencing.
Nature genetics 2012;44(2):165-9.
2011: Satoru Yokoyama; Victoria L Zismann; Joanne F Aitken; Lauren G Aoude; Bruce K Armstrong; D Timothy Bishop; Vanessa Bonazzi; Glen M Boyle; Anne E Cust; David L Duffy; Alison M Dunning; Ken Dutton-Regester; Douglas F Easton; Megan Ferguson; David E Fisher; Michael Gartside; Graham G Giles; Rizwan Haq; Mark Harland; Nicholas K Hayward; Elizabeth A Holland; Kelly Holohan; John L Hopper; Mark A Jenkins; Jodie Jetann; Richard F Kefford; Cathy Lanagan; Matthew H Law; Stuart MacGregor; Graham J Mann; Nicholas G Martin; Judith A Maskiell; Grant W Montgomery; Julia A Newton-Bishop; Linda O'Connor; Jane M Palmer; Paul D Pharoah; Helen Schmid; Christopher Schmidt; Mitchell S Stark; Judith Symmons; John C Taylor; Jeffrey M. Trent; Hensin Tsao; David C Whiteman; Susan L Woods; Kevin M Brown
A novel recurrent mutation in MITF predisposes to familial and sporadic melanoma.
Nature 2011;480(7375):99-103.
2011: Stuart Macgregor; Rona Mackie; Graham J Mann; Nicholas G Martin; Judith A Maskiell; Grant W Montgomery; Julia A Newton-Bishop; Dale R Nyholt; Håkan Olsson; Jodie N Painter; Susana Puig; Abrar A Qureshi; Helen Schmid; Mitchell Stark; Jeffrey M. Trent; Li-E Wang; Qingyi Wei; David C Whiteman; Mingfeng Zhang; Zhen Zhen Zhao; Joanne F Aitken; Christopher I Amos; Bruce K Armstrong; Esther Azizi; Giovanna Bianchi-Scarrà; D Timothy Bishop; Brigitte Bressac-de Paillerets; Kevin M Brown; Anne E Cust; Tadeusz Dębniak; Florence Demenais; David L Duffy; David E Elder; Megan Ferguson; Graham G Giles; Alisa M Goldstein; Nelleke A Gruis; Jiali Han; Johan Hansson; Per Helsing; Anjali K Henders; Elizabeth A Holland; John L Hopper; Mark M Iles; Mark A Jenkins; Jodie Jetann; Peter A Kanetsky; Richard F Kefford; Maria Teresa Landi; Jeffrey E Lee; Jimmy Z Liu; Nicholas K Hayward
Genome-wide association study identifies a new melanoma susceptibility locus at 1q21.3.
Nature genetics 2011;43(11):1114-8.
2011: Christian Ruiz; Michael Shen; Jeffrey M. Trent; Daniel Von Hoff; Tobias Zellweger; Lukas Bubendorf; John D Carpten; Micheal J Demeure; Lisa Evers; Tara Holley; Michael A Hollingsworth; Jeff Kiefer; Elizabeth Lenkiewicz; Spyro Mousses; Donna Prunkard; Peter S Rabinovitch; Alex Robeson; Michael T Barrett
Advancing a clinically relevant perspective of the clonal nature of cancer.
Proceedings of the National Academy of Sciences of the United States of America 2011;108(29):12054-9.
2011: Meredith C Henderson; Spyro Mousses; Jeffrey M. Trent; Daniel Von Hoff; Shilpi Arora; Ashish Choudhary; Irma M Gonzales; David Azorsa
High-throughput RNAi screening identifies a role for TNK1 in growth and survival of pancreatic cancer cells.
Molecular cancer research : MCR 2011;9(6):724-32.
2011: Xin-Jian Li; Choon Kiat Ong; Yun Cao; Yan-Qun Xiang; Jian-Yong Shao; Aikseng Ooi; Li-Xia Peng; Wen-Hua Lu; Zhongfa Zhang; David Petillo; Li Qin; Ying-Na Bao; Fang-Jing Zheng; Claramae Shulyn Chia; N Gopalakrishna Iyer; Tie-Bang Kang; Yi-Xin Zeng; Khee Chee Soo; Jeffrey M. Trent; Bin Tean Teh; Chao-Nan Qian
Serglycin is a theranostic target in nasopharyngeal carcinoma that promotes metastasis.
Cancer research 2011;71(8):3162-72.
2011: Michael A Chapman; Michael S Lawrence; Jonathan J Keats; Kristian Cibulskis; Carrie Sougnez; Anna C Schinzel; Christina L Harview; Jean-Philippe Brunet; Gregory J Ahmann; Mazhar Adli; Kenneth C Anderson; Kristin G Ardlie; Daniel Auclair; Angela Baker; P Leif Bergsagel; Bradley E Bernstein; Yotam Drier; Rafael Fonseca; Stacey B Gabriel; Craig C Hofmeister; Sundar Jagannath; Andrzej J Jakubowiak; Amrita Krishnan; Joan Levy; Ted Liefeld; Sagar Lonial; Scott Mahan; Bunmi Mfuko; Stefano Monti; Louise M Perkins; Robb Onofrio; Trevor J Pugh; S Vincent Rajkumar; Alex H Ramos; David S Siegel; Andrey Sivachenko; A Keith Stewart; Suzanne Trudel; Ravi Vij; Douglas Voet; Wendy Winckler; Todd Zimmerman; John Carpten; Jeffrey M. Trent; William C Hahn; Levi A Garraway; Matthew Meyerson; Eric S Lander; Gad Getz; Todd R Golub
Initial genome sequencing and analysis of multiple myeloma.
Nature 2011;471(7339):467-72.
2010: Ilir Agalliu; Suzanne M Leanza; Lorie Smith; Jeffrey M. Trent; John D Carpten; Joan E Bailey-Wilson; Robert D Burk
Contribution of HPC1 (RNASEL) and HPCX variants to prostate cancer in a founder population.
The Prostate 2010;70(15):1716-27.
2010: Aleksandar Sekulic; Su Y Kim; Galen Hostetter; Stephanie Savage; Janine G Einspahr; Anil Prasad; Paul Sagerman; Clara Curiel-Lewandrowski; Robert Krouse; George Bowden; James Warneke; David S Alberts; Mark R Pittelkow; David DiCaudo; Brian J Nickoloff; Jeffrey M. Trent; Michael Bittner
Loss of inositol polyphosphate 5-phosphatase is an early event in development of cutaneous squamous cell carcinoma.
Cancer prevention research (Philadelphia, Pa.) 2010;3(10):1277-83.
2010: Jianfeng Xu; S Lilly Zheng; Sarah D Isaacs; Kathy E Wiley; Fredrik Wiklund; Jielin Sun; A Karim Kader; Ge Li; Lina D Purcell; Seong-Tae Kim; Fang-Chi Hsu; Pär Stattin; Jonas Hugosson; Jan Adolfsson; Patrick C Walsh; Jeffrey M. Trent; David Duggan; John D Carpten; Henrik Grönberg; William B Isaacs
Inherited genetic variant predisposes to aggressive but not indolent prostate cancer.
Proceedings of the National Academy of Sciences of the United States of America 2010;107(5):2136-40.
2010: Galen Hostetter; Su Young Kim; Stephanie Savage; Gerald C Gooden; Michael Barrett; Jian Zhang; Lalitamba Alla; April Watanabe; Janine Einspahr; Anil Prasad; Brian J Nickoloff; John D Carpten; Jeffrey M. Trent; David Alberts; Michael Bittner
Random DNA fragmentation allows detection of single-copy, single-exon alterations of copy number by oligonucleotide array CGH in clinical FFPE samples.
Nucleic acids research 2010;38(2):e9.
2009: Steven L Warner; Bret J Stephens; Stanley Nwokenkwo; Galen Hostetter; Anastasia Sugeng; Manuel Hidalgo; Jeffrey M. Trent; Haiyong Han; Daniel Von Hoff
Validation of TPX2 as a potential therapeutic target in pancreatic cancer cells.
Clinical cancer research : an official journal of the American Association for Cancer Research 2009;15(21):6519-28.
2009: Edward R Dougherty; Marcel Brun; Jeffrey M. Trent; Michael Bittner
Conditioning-based modeling of contextual genomic regulation.
IEEE/ACM transactions on computational biology and bioinformatics / IEEE, ACM 2009;6(2):310-20.
2009: David Azorsa; Irma M Gonzales; Gargi D Basu; Ashish Choudhary; Shilpi Arora; Kristen M Bisanz; Jeff Kiefer; Meredith C Henderson; Jeffrey M. Trent; Daniel Von Hoff; Spyro Mousses
Synthetic lethal RNAi screening identifies sensitizing targets for gemcitabine therapy in pancreatic cancer.
Journal of translational medicine 2009;7():43.
2009: Michael G Gartside; Huaibin Chen; Omar A Ibrahimi; Sara Byron; Amy V Curtis; Candice L Wellens; Ana Bengston; Laura M Yudt; Anna V Eliseenkova; Jinghong Ma; John A Curtin; Pilar Hyder; Ursula L Harper; Erica Riedesel; Graham J Mann; Jeffrey M. Trent; Boris C Bastian; Paul S Meltzer; Moosa Mohammadi; Pam Pollock
Loss-of-function fibroblast growth factor receptor-2 mutations in melanoma.
Molecular cancer research : MCR 2009;7(1):41-54.
2008: Spyro Mousses; Jeff Kiefer; Daniel Von Hoff; Jeffrey M. Trent
Using biointelligence to search the cancer genome: an epistemological perspective on knowledge recovery strategies to enable precision medical genomics.
Oncogene 2008;27 Suppl 2():S58-66.
2008: Jielin Sun; Siqun Lilly Zheng; Fredrik Wiklund; Sarah D Isaacs; Lina D Purcell; Zhengrong Gao; Fang-Chi Hsu; Seong-Tae Kim; Wennuan Liu; Yi Zhu; Pär Stattin; Hans-Olov Adami; Kathleen E Wiley; Latchezar Dimitrov; Jishan Sun; Tao Li; Aubrey R Turner; Tamara S Adams; Jan Adolfsson; Jan-Erik Johansson; James Lowey; Bruce J Trock; Alan W Partin; Patrick C Walsh; Jeffrey M. Trent; David Duggan; John Carpten; Bao-Li Chang; Henrik Grönberg; William B Isaacs; Jianfeng Xu
Evidence for two independent prostate cancer risk-associated loci in the HNF1B gene at 17q12.
Nature genetics 2008;40(10):1153-5.
2008: Femke A De Snoo; Jouke-Jan Hottenga; Elizabeth M Gillanders; Lodewijk A Sandkuijl; Mary Pat Jones; Wilma Bergman; Clasine van der Drift; Inge van Leeuwen; Lenny van Mourik; Jeanet A C Ter Huurne; Rune R Frants; Rein Willemze; Martijn H Breuning; Jeffrey M. Trent; Nelleke A Gruis
Genome-wide linkage scan for atypical nevi in p16-Leiden melanoma families.
European journal of human genetics : EJHG 2008;16(9):1135-41.
2008: Gargi D Basu; David Azorsa; Jeff Kiefer; Angela M Rojas; Sukru Tuzmen; Michael T Barrett; Jeffrey M. Trent; Olli Kallioniemi; Spyro Mousses
Functional evidence implicating S100P in prostate cancer progression.
International journal of cancer. Journal international du cancer 2008;123(2):330-9.
2008: Kevin Brown; Stuart Macgregor; Grant W Montgomery; David Craig; Zhen Zhen Zhao; Kelly Iyadurai; Anjali K Henders; Nils Homer; Megan J Campbell; Mitchell Stark; Shane Thomas; Helen Schmid; Elizabeth A Holland; Elizabeth M Gillanders; David L Duffy; Judith A Maskiell; Jodie Jetann; Megan Ferguson; Dietrich A Stephan; Anne E Cust; David Whiteman; Adele Green; Håkan Olsson; Susana Puig; Paola Ghiorzo; Johan Hansson; Florence Demenais; Alisa M Goldstein; Nelleke A Gruis; David E Elder; Julia Newton Bishop; Richard F Kefford; Graham G Giles; Bruce K Armstrong; Joanne F Aitken; John L Hopper; Nicholas G Martin; Jeffrey M. Trent; Graham J Mann; Nicholas K Hayward
Common sequence variants on 20q11.22 confer melanoma susceptibility.
Nature genetics 2008;40(7):838-40.
2008: Elizabeth A Stephan; Tae-Hoon Chung; Clive S Grant; Seungchan Kim; Daniel Von Hoff; Jeffrey M. Trent; Micheal J Demeure
Adrenocortical carcinoma survival rates correlated to genomic copy number variants.
Molecular cancer therapeutics 2008;7(2):425-31.
2008: Timothy F Cloughesy; Koji Yoshimoto; Phioanh Nghiemphu; Kevin Brown; Julie Dang; Shaojun Zhu; Teli Hsueh; Yinan Chen; Wei Wang; David Youngkin; Linda M Liau; Neil Martin; Don Becker; Marvin Bergsneider; Albert Lai; Richard Green; Tom Oglesby; Michael Koleto; Jeffrey M. Trent; Steve Horvath; Paul S Mischel; Ingo K Mellinghoff; Charles L Sawyers
Antitumor activity of rapamycin in a Phase I trial for patients with recurrent PTEN-deficient glioblastoma.
PLoS medicine 2008;5(1):e8.
2008: Sally A Amundson; Khanh T Do; Lisa C Vinikoor; R Anthony Lee; Christine A Koch-Paiz; Jaeyong Ahn; Mark Reimers; Yidong Chen; Dominic A Scudiero; John N Weinstein; Jeffrey M. Trent; Michael Bittner; Paul S Meltzer; Albert J Fornace
Integrating global gene expression and radiation survival parameters across the 60 cell lines of the National Cancer Institute Anticancer Drug Screen.
Cancer research 2008;68(2):415-24.
2007: Jeffrey M. Trent; Jeffrey W Touchman
Cancer. The gene topography of cancer.
Science (New York, N.Y.) 2007;318(5853):1079-80.
2007: Pam Pollock; M G Gartside; L C Dejeza; Matthew A Powell; Mary Ann Mallon; H Davies; M Mohammadi; P A Futreal; M R Stratton; Jeffrey M. Trent; Paul J Goodfellow
Frequent activating FGFR2 mutations in endometrial carcinomas parallel germline mutations associated with craniosynostosis and skeletal dysplasia syndromes.
Oncogene 2007;26(50):7158-62.
2007: Myoyong Lee; Jeffrey M. Trent; Michael Bittner
Optimization of oligonucleotide microarray fabricated by spotting 65-mer.
Analytical biochemistry 2007;368(1):61-9.
2007: Myoyong Lee; Charlie C Xiang; Jeffrey M. Trent; Michael Bittner
Performance characteristics of 65-mer oligonucleotide microarrays.
Analytical biochemistry 2007;368(1):70-8.
2007: Jonathan J Keats; Rafael Fonseca; Marta Chesi; Roelandt Schop; Angela Baker; Wee J Chng; Scott Van Wier; Rodger Tiedemann; Chang-Xin Shi; Michael Sebag; Esteban Braggio; Travis Henry; Yuan-Xiao Zhu; Homer Fogle; Tammy Price-Troska; Gregory J Ahmann; Catherine Mancini; Leslie A Brents; Shaji Kumar; Philip R Greipp; Angela Dispenzieri; Bryant Barbara; George Mulligan; Laurakay Bruhn; Michael Barrett; Riccardo Valdez; Jeffrey M. Trent; A Keith Stewart; John D Carpten; P Leif Bergsagel
Promiscuous mutations activate the noncanonical NF-kappaB pathway in multiple myeloma.
Cancer cell 2007;12(2):131-44.
2007: Samudra K Dissanayake; Michael Wade; Carrie E Johnson; Michael O'Connell; Poloko D Leotlela; Amanda D French; Kavita V Shah; Kyle J Hewitt; Devin T Rosenthal; Fred E Indig; Yuan Jiang; Brian J Nickoloff; Dennis D Taub; Jeffrey M. Trent; Randall T Moon; Michael Bittner; Ashani T Weeraratna
The Wnt5A/protein kinase C pathway mediates motility in melanoma cells via the inhibition of metastasis suppressors and initiation of an epithelial to mesenchymal transition.
The Journal of biological chemistry 2007;282(23):17259-71.
2007: Ethan M Lange; Christiane M Robbins; Elizabeth M Gillanders; S Lilly Zheng; Jianfeng Xu; Yunfei Wang; Kirsten A White; Bao-Li Chang; Lindsey A Ho; Jeffrey M. Trent; John D Carpten; William B Isaacs; Kathleen Cooney
Fine-mapping the putative chromosome 17q21-22 prostate cancer susceptibility gene to a 10 cM region based on linkage analysis.
Human genetics 2007;121(1):49-55.
2007: Wennuan Liu; Baoli Chang; Tao Li; Latchezar Dimitrov; Seungchan Kim; Jin Woo Kim; Aubrey R Turner; Deborah A Meyers; Jeffrey M. Trent; S Lilly Zheng; William B Isaacs; Jianfeng Xu
Germline copy number polymorphisms involving larger than 100 kb are uncommon in normal subjects.
The Prostate 2007;67(3):227-33.
2007: Gu Zhu; Grant W Montgomery; Michael R James; Jeffrey M. Trent; Nicholas K Hayward; Nicholas G Martin; David L Duffy
A genome-wide scan for naevus count: linkage to CDKN2A and to other chromosome regions.
European journal of human genetics : EJHG 2007;15(1):94-102.
2007: Agnes B Baffoe-Bonnie; Rick Kittles; Elizabeth Gillanders; Liang Ou; Asha George; Christiane Robbins; Chiledum Ahaghotu; James Bennett; William Boykin; Gerald Hoke; Terry Mason; Curtis Pettaway; Srinivasan Vijayakumar; Sally P Weinrich; Mary P Jones; Derek Gildea; Erica Riedesel; Julie Albertus; Tracy Moses; Erica Lockwood; Meghan Klaric; Mezbah Faruque; Charmaine Royal; Jeffrey M. Trent; Kate Berg; Francis S Collins; Paulette M Furbert-Harris; Joan E Bailey-Wilson; Georgia M Dunston; Isaac J Powell; John D Carpten
Genome-wide linkage of 77 families from the African American Hereditary Prostate Cancer study (AAHPC).
The Prostate 2007;67(1):22-31.
2006: Nanna Dahl Rendtorff; Mei Zhu; Toril Fagerheim; Torben L Antal; MaryPat Jones; Tanya M Teslovich; Elizabeth M Gillanders; M. Michael Barmada; Erik Teig; Jeffrey M. Trent; Karen H Friderici; Dietrich A Stephan; Lisbeth Tranebjaerg
A novel missense mutation in ACTG1 causes dominant deafness in a Norwegian DFNA20/26 family, but ACTG1 mutations are not frequent among families with hereditary hearing impairment.
European journal of human genetics : EJHG 2006;14(10):1097-105.
2006: Elizabeth M Gillanders; John Pearson; Alexa J M Sorant; Jeffrey M. Trent; Jeffrey R O'Connell; Joan E Bailey-Wilson
The value of molecular haplotypes in a family-based linkage study.
American journal of human genetics 2006;79(3):458-68.
2006: Rick Kittles; Agnes B Baffoe-Bonnie; Tracy Y Moses; Christiane M Robbins; Chiledum Ahaghotu; Pia Huusko; C Pettaway; S Vijayakumar; J Bennett; Gerald Hoke; T Mason; Sally P Weinrich; Jeffrey M. Trent; Francis S Collins; Spyro Mousses; Joan E Bailey-Wilson; Paulette Furbert-Harris; Georgia M Dunston; Isaac J Powell; John D Carpten
A common nonsense mutation in EphB2 is associated with prostate cancer risk in African American men with a positive family history.
Journal of medical genetics 2006;43(6):507-11.
2006: Ethan M Lange; Lindsey A Ho; Jennifer L Beebe; Yunfei Wang; Elizabeth M Gillanders; Jeffrey M. Trent; Leslie A Lange; David P Wood Jr; Kathleen Cooney
Genome-wide linkage scan for prostate cancer susceptibility genes in men with aggressive disease: significant evidence for linkage at chromosome 15q12.
Human genetics 2006;119(4):400-7.
2006: Thomas A Sellers; Neil Caporaso; Stan Lapidus; Gloria M Petersen; Jeffrey M. Trent
Opportunities and barriers in the age of team science: strategies for success.
Cancer causes & control : CCC 2006;17(3):229-37.
2006: Bao-Li Chang; Ethan M Lange; Latchezar Dimitrov; Christopher J Valis; Elizabeth M Gillanders; Leslie A Lange; Kathy E Wiley; Sarah D Isaacs; Fredrik Wiklund; Agnes B Baffoe-Bonnie; Carl D Langefeld; S Lilly Zheng; Mika P Matikainen; Tarja Ikonen; Henna Fredriksson; Teuvo Tammela; Patrick C Walsh; Joan E Bailey-Wilson; Johanna Schleutker; Henrik Gronberg; Kathleen Cooney; William B Isaacs; Edward Suh; Jeffrey M. Trent; Jianfeng Xu
Two-locus genome-wide linkage scan for prostate cancer susceptibility genes with an interaction effect.
Human genetics 2006;118(6):716-24.
2006: Sanggyu Lee; Jianjun Chen; Guolin Zhou; Run Zhang Shi; Gerard G Bouffard; Masha Kocherginsky; Xijin Ge; Miao Sun; Nimanthi Jayathilaka; Yeong Cheol Kim; Neelmini Emmanuel; Stefan K Bohlander; Mark Minden; Justin Kline; Ozden Ozer; Richard A Larson; Michelle M LeBeau; Eric Green; Jeffrey M. Trent; Theodore Karrison; Piu Paul Liu; San Ming Wang; Janet D Rowley
Gene expression profiles in acute myeloid leukemia with common translocations using SAGE.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(4):1030-5.
2005: Elisabeth A Seftor; Kevin Brown; Lynda Chin; Dawn A Kirschmann; William W Wheaton; Alexei Protopopov; Bin Feng; yoganand balagurunathan; Jeffrey M. Trent; Brian J Nickoloff; Richard E B Seftor; Mary J C Hendrix
Epigenetic transdifferentiation of normal melanocytes by a metastatic melanoma microenvironment.
Cancer research 2005;65(22):10164-9.
2005: Brian J Nickoloff; Mary J C Hendrix; Pam Pollock; Jeffrey M. Trent; Lucio Miele; Jian-Zhong Qin
Notch and NOXA-related pathways in melanoma cells.
The journal of investigative dermatology. Symposium proceedings / the Society for Investigative Dermatology, Inc. [and] European Society for Dermatological Research 2005;10(2):95-104.
2005: Jianfeng Xu; James Lowey; Fredrik Wiklund; Jielin Sun; Fredrik Lindmark; Fang-Chi Hsu; Latchezar Dimitrov; Baoli Chang; Aubrey R Turner; Wennan Liu; Hans-Olov Adami; Edward Suh; Jason Moore; S Lilly Zheng; William B Isaacs; Jeffrey M. Trent; Henrik Grönberg
The interaction of four genes in the inflammation pathway significantly predicts prostate cancer risk.
Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology 2005;14(11 Pt 1):2563-8.
2005: Natalay Kouprina; Adam Pavlicek; Vladimir N Noskov; Greg Solomon; John Otstot; William B Isaacs; John D Carpten; Jeffrey M. Trent; Johanna Schleutker; J Carl Barrett; Jerzy Jurka; Vladimir Larionov
Dynamic structure of the SPANX gene cluster mapped to the prostate cancer susceptibility locus HPCX at Xq27.
Genome research 2005;15(11):1477-86.
2005: Ellen G Feigal; Nicholas C Dracopoli; Jeffrey M. Trent
Oncogenomics 2005 meeting report: dissecting cancer through genome research.
Cancer research 2005;65(19):8587-90.
2005: Bao-Li Chang; Sarah D Isaacs; Kathy E Wiley; Elizabeth M Gillanders; S Lilly Zheng; Deborah A Meyers; Patrick C Walsh; Jeffrey M. Trent; Jianfeng Xu; William B Isaacs
Genome-wide screen for prostate cancer susceptibility genes in men with clinically significant disease.
The Prostate 2005;64(4):356-61.
2005: Agnes B Baffoe-Bonnie; Jeffrey R Smith; Dietrich A Stephan; Johanna Schleutker; John D Carpten; Tommi Kainu; Elizabeth M Gillanders; Mika P Matikainen; Tanya M Teslovich; Teuvo Tammela; Raman Sood; Andrew Balshem; Sheehan D Scarborough; Jianfeng Xu; William B Isaacs; Jeffrey M. Trent; Olli Kallioniemi; Joan E Bailey-Wilson
A major locus for hereditary prostate cancer in Finland: localization by linkage disequilibrium of a haplotype in the HPCX region.
Human genetics 2005;117(4):307-16.
2005: Jian-Zhong Qin; Jeffrey Ziffra; Lawrence S Stennett; Barbara Bodner; Brian Bonish; Vijaya Chaturvedi; Frank Bennett; Pam Pollock; Jeffrey M. Trent; Mary J C Hendrix; Paola Rizzo; Lucio Miele; Brian J Nickoloff
Proteasome inhibitors trigger NOXA-mediated apoptosis in melanoma and myeloma cells.
Cancer research 2005;65(14):6282-93.
2005: Sally A Amundson; Khanh T Do; Lisa Vinikoor; Christine A Koch-Paiz; Michael Bittner; Jeffrey M. Trent; Paul Meltzer; Albert J Fornace
Stress-specific signatures: expression profiling of p53 wild-type and -null human cells.
Oncogene 2005;24(28):4572-9.
2005: Bao-Li Chang; Elizabeth M Gillanders; Sarah D Isaacs; Kathy E Wiley; Tamara Adams; Aubrey R Turner; S Lilly Zheng; Deborah A Meyers; John D Carpten; Patrick C Walsh; Jeffrey M. Trent; Jianfeng Xu; William B Isaacs
Evidence for a general cancer susceptibility locus at 3p24 in families with hereditary prostate cancer.
Cancer letters 2005;219(2):177-82.
2005: Annika Rökman; Agnes B Baffoe-Bonnie; Elizabeth M Gillanders; Henna Fredriksson; Ville Autio; Tarja Ikonen; Kenneth D Gibbs; Marypat Jones; Derek Gildea; Diana Freas-Lutz; Carol Markey; Mika P Matikainen; Pasi A Koivisto; Teuvo L J Tammela; Olli Kallioniemi; Jeffrey M. Trent; Joan E Bailey-Wilson; Johanna Schleutker
Hereditary prostate cancer in Finland: fine-mapping validates 3p26 as a major predisposition locus.
Human genetics 2005;116(1-2):43-50.
2004: Sanju Attoor; Edward R Dougherty; Yidong Chen; Michael Bittner; Jeffrey M. Trent
Which is better for cDNA-microarray-based classification: ratios or direct intensities.
Bioinformatics (Oxford, England) 2004;20(16):2513-20.
2004: Elizabeth M Gillanders; Anthony Masiello; Derek Gildea; Lowell Umayam; Priya Duggal; Mary Pat Jones; Alison P Klein; Diana Freas-Lutz; Grace Ibay; Kenneth L Trout; Tyra G Wolfsberg; Jeffrey M. Trent; Joan E Bailey-Wilson; Andreas D Baxevanis
GeneLink: a database to facilitate genetic studies of complex traits.
BMC genomics 2004;5():81.
2004: Pia Huusko; Damaris Ponciano-Jackson; Maija Wolf; Jeff Kiefer; David Azorsa; Sukru Tuzmen; Don Weaver; Christiane Robbins; Tracy Y Moses; Minna Allinen; Sampsa Hautaniemi; Yidong Chen; Abdel G Elkahloun; Mark Basik; G Steven Bova; Lukas Bubendorf; Alessandro Lugli; Guido Sauter; Johanna Schleutker; Hilmi Ozcelik; Sabine Elowe; Tony Pawson; Jeffrey M. Trent; John D Carpten; Olli Kallioniemi; Spyro Mousses
Nonsense-mediated decay microarray analysis identifies mutations of EPHB2 in human prostate cancer.
Nature genetics 2004;36(9):979-83.
2004: Graeme J Walker; James O Indsto; Raman Sood; Mezbah U Faruque; Ping Hu; Pam Pollock; Paul H Duray; Elizabeth A Holland; Kevin Brown; Richard F Kefford; Jeffrey M. Trent; Graham J Mann; Nicholas K Hayward
Deletion mapping suggests that the 1p22 melanoma susceptibility gene is a tumor suppressor localized to a 9-Mb interval.
Genes, chromosomes & cancer 2004;41(1):56-64.
2004: Elizabeth M Gillanders; Jianfeng Xu; Bao-Li Chang; Ethan M Lange; Fredrik Wiklund; Joan E Bailey-Wilson; Agnes B Baffoe-Bonnie; MaryPat Jones; Derek Gildea; Erica Riedesel; Julie Albertus; Sarah D Isaacs; Kathy E Wiley; Caroline E Mohai; Mika P Matikainen; Teuvo L J Tammela; S Lilly Zheng; W Mark Brown; Annika Rökman; John D Carpten; Deborah A Meyers; Patrick C Walsh; Johanna Schleutker; Henrik Gronberg; Kathleen Cooney; William B Isaacs; Jeffrey M. Trent
Combined genome-wide scan for prostate cancer susceptibility genes.
Journal of the National Cancer Institute 2004;96(16):1240-7.
2004: Jian-Zhong Qin; Lawrence S Stennett; Patricia Bacon; Barbara Bodner; Mary J C Hendrix; Richard E B Seftor; Elisabeth A Seftor; Naira V Margaryan; Pam Pollock; Amy Curtis; Jeffrey M. Trent; Frank Bennett; Lucio Miele; Brian J Nickoloff
p53-independent NOXA induction overcomes apoptotic resistance of malignant melanomas.
Molecular cancer therapeutics 2004;3(8):895-902.
2004: Jianfeng Xu; Carl D Langefeld; S Lilly Zheng; Elizabeth M Gillanders; Bao-Li Chang; Sarah D Isaacs; Adrienne H Williams; Kathy E Wiley; Latchezar Dimitrov; Deborah A Meyers; Patrick C Walsh; Jeffrey M. Trent; William B Isaacs
Interaction effect of PTEN and CDKN1B chromosomal regions on prostate cancer linkage.
Human genetics 2004;115(3):255-62.
2004: yoganand balagurunathan; Naisyin Wang; Edward R Dougherty; Danh V Nguyen; Yidong Chen; Michael Bittner; Jeffrey M. Trent; Raymond Carroll
Noise factor analysis for cDNA microarrays.
Journal of biomedical optics 2004;9(4):663-78.
2004: Gu Zhu; David M Evans; David L Duffy; Grant W Montgomery; Sarah E Medland; Nathan A Gillespie; Kelly R Ewen; Mary Jewell; Yew Wah Liew; Nicholas K Hayward; Richard A Sturm; Jeffrey M. Trent; Nicholas G Martin
A genome scan for eye color in 502 twin families: most variation is due to a QTL on chromosome 15q.
Twin research : the official journal of the International Society for Twin Studies 2004;7(2):197-210.
2004: Zhongmin Guo; Jürgen F Linn; Guojun Wu ; Sarah L Anzick; Claus F Eisenberger; Sarel Halachmi; Yoram Cohen; Alexey Fomenkov; Mohammad Hoque; Kenji Okami; Gabriel Steiner; James M Engles; Motonobu Osada; Chulso Moon; Edward Ratovitski; Jeffrey M. Trent; Paul S Meltzer; William H Westra; Lambertus A L M Kiemeney; Mark P Schoenberg; David Sidransky; Barry Trink
CDC91L1 (PIG-U) is a newly discovered oncogene in human bladder cancer.
Nature medicine 2004;10(4):374-81.
2004: J Rafael Gorospe; Bhim S Singhal; Tommi Kainu; F Wu; Dietrich A Stephan; Jeffrey M. Trent; Eric Hoffman; Sakkubai Naidu
Indian Agarwal megalencephalic leukodystrophy with cysts is caused by a common MLC1 mutation.
Neurology 2004;62(6):878-82.
2004: Ashani T Weeraratna; Dorothea Becker; Kristen M Carr; Paul H Duray; Kevin P Rosenblatt; Sherry Yang; Yidong Chen; Michael Bittner; Robert L Strausberg; Gregory J Riggins; Urs Wagner; Olli Kallioniemi; Jeffrey M. Trent; Patrice J Morin; Paul S Meltzer
Generation and analysis of melanoma SAGE libraries: SAGE advice on the melanoma transcriptome.
Oncogene 2004;23(12):2264-74.
2004: Danielle M Friedrichsen; Janet L Stanford; Sarah D Isaacs; Marta Janer; Bao-Li Chang; Kerry Deutsch; Elizabeth M Gillanders; Suzanne Kolb; Kathy E Wiley; Michael D Badzioch; S Lilly Zheng; Patrick C Walsh; Gail P Jarvik; Leroy Hood; Jeffrey M. Trent; William B Isaacs; Elaine A Ostrander; Jianfeng Xu
Identification of a prostate cancer susceptibility locus on chromosome 7q11-21 in Jewish families.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(7):1939-44.
2004: Pia Huusko; Suh-Hang Hank Juo; Elizabeth M Gillanders; Laura Sarantaus; Tommi Kainu; Pia Vahteristo; Minna Allinen; MaryPat Jones; Katrin Rapakko; Hannaleena Eerola; Carol Markey; Paula Vehmanen; Derek Gildea; Diana Freas-Lutz; Carl Blomqvist; Jaakko Leisti; Guillermo Blanco; Ulla Puistola; Jeffrey M. Trent; Joan E Bailey-Wilson; Robert Winqvist; Heli Nevanlinna; Olli Kallioniemi
Genome-wide scanning for linkage in Finnish breast cancer families.
European journal of human genetics : EJHG 2004;12(2):98-104.
2004: Raman Sood; P I Bader; M C Speer; Yvonne H Edwards; Erica M Eddings; R T Blair; Ping Hu; Mezbah U Faruque; Christiane M Robbins; H Zhang; J Leuders; K Morrison; D Thompson; Pamela L Schwartzberg; Paul S Meltzer; Jeffrey M. Trent
Cloning and characterization of an inversion breakpoint at 6q23.3 suggests a role for Map7 in sacral dysgenesis.
Cytogenetic and genome research 2004;106(1):61-7.
2004: Chiledum Ahaghotu; Agnes B Baffoe-Bonnie; Rick Kittles; C Pettaway; Isaac J Powell; Charmaine Royal; H Wang; S Vijayakumar; J Bennett; Gerald Hoke; T Mason; J Bailey-Wilson; W Boykin; Kate Berg; J Carpten; Sally P Weinrich; Jeffrey M. Trent; Georgia M Dunston; Francis S Collins
Clinical characteristics of African-American men with hereditary prostate cancer: the AAHPC Study.
Prostate cancer and prostatic diseases 2004;7(2):165-9.
2003: Ethan M Lange; Elizabeth M Gillanders; Cralen C Davis; W Mark Brown; Joel K Campbell; MaryPat Jones; Derek Gildea; Erica Riedesel; Julie Albertus; Diana Freas-Lutz; Carol Markey; Veda Giri; Jennifer L Beebe; James E Montie; Jeffrey M. Trent; Kathleen Cooney
Genome-wide scan for prostate cancer susceptibility genes using families from the University of Michigan prostate cancer genetics project finds evidence for linkage on chromosome 17 near BRCA1.
The Prostate 2003;57(4):326-34.
2003: Jianfeng Xu; Elizabeth M Gillanders; Sarah D Isaacs; Bao-Li Chang; Kathy E Wiley; S Lilly Zheng; MaryPat Jones; Derek Gildea; Erica Riedesel; Julie Albertus; Diana Freas-Lutz; Carol Markey; Deborah A Meyers; Patrick C Walsh; Jeffrey M. Trent; William B Isaacs
Genome-wide scan for prostate cancer susceptibility genes in the Johns Hopkins hereditary prostate cancer families.
The Prostate 2003;57(4):320-5.
2003: Fredrik Wiklund; Elizabeth M Gillanders; Julie Albertus; Anders Bergh; Jan-Erik Damber; Monica Emanuelsson; Diana Freas-Lutz; Derek Gildea; Ingela Göransson; MaryPat S Jones; Björn-Anders Jonsson; Fredrik Lindmark; Carol Markey; Erica Riedesel; Elisabeth Stenman; Jeffrey M. Trent; Henrik Grönberg
Genome-wide scan of Swedish families with hereditary prostate cancer: suggestive evidence of linkage at 5q11.2 and 19p13.3.
The Prostate 2003;57(4):290-7.
2003: Johanna Schleutker; Agnes B Baffoe-Bonnie; Elizabeth M Gillanders; Tommi Kainu; Mary-Pat Jones; Diana Freas-Lutz; Carol Markey; Derek Gildea; Erica Riedesel; Julie Albertus; Kenneth D Gibbs; Mika P Matikainen; Pasi A Koivisto; Teuvo Tammela; Joan E Bailey-Wilson; Jeffrey M. Trent; Olli Kallioniemi
Genome-wide scan for linkage in finnish hereditary prostate cancer (HPC) families identifies novel susceptibility loci at 11q14 and 3p25-26.
The Prostate 2003;57(4):280-9.
2003: Ying Xiang; Zhengfu Wang; Junko Murakami; Sarah J Plummer; Eric A Klein; John D Carpten; Jeffrey M. Trent; William B Isaacs; Graham Casey; Robert H Silverman
Effects of RNase L mutations associated with prostate cancer on apoptosis induced by 2',5'-oligoadenylates.
Cancer research 2003;63(20):6795-801.
2003: Karine A Cohen-Solal; Raman Sood; Yari Marin; Steven M Crespo-Carbone; Daniel Sinsimer; Jeffrey J Martino; Christiane Robbins; Izabela Makalowska; Jeffrey M. Trent; Suzie Chen
Identification and characterization of mouse Rab32 by mRNA and protein expression analysis.
Biochimica et biophysica acta 2003;1651(1-2):68-75.
2003: Mark Basik; Spyro Mousses; Jeffrey M. Trent
Integration of genomic technologies for accelerated cancer drug development.
BioTechniques 2003;35(3):580-2, 584, 586 passim.
2003: Roberto Bomprezzi; Markus Ringnér; Seungchan Kim; Michael Bittner; Javed Khan; Yidong Chen; Abdel G Elkahloun; Aimee Yu; Bibiana Bielekova; Paul S Meltzer; Roland Martin; Henry McFarland; Jeffrey M. Trent
Gene expression profile in multiple sclerosis patients and healthy controls: identifying pathways relevant to disease.
Human molecular genetics 2003;12(17):2191-9.
2003: Elizabeth M Gillanders; Suh-Hang Hank Juo; Elizabeth A Holland; MaryPat Jones; Derek Nancarrow; Diana Freas-Lutz; Raman Sood; Naeun Park; Mezbah U Faruque; Carol Markey; Richard F Kefford; Jane Palmer; Wilma Bergman; D Timothy Bishop; Margaret A Tucker; Brigitte Bressac De-Paillerets; Johan Hansson; Mitchell Stark; Nelleke A Gruis; Julia Newton Bishop; Alisa M Goldstein; Joan E Bailey-Wilson; Graham J Mann; Nicholas Hayward; Jeffrey M. Trent
Localization of a novel melanoma susceptibility locus to 1p22.
American journal of human genetics 2003;73(2):301-13.
2003: Raman Sood; Izabela Makalowska; Michal Galdzicki; Ping Hu; Erica M Eddings; Christiane M Robbins; Tracy Y Moses; Jin Namkoong; Suzie Chen; Jeffrey M. Trent
Cloning and characterization of a novel gene, SHPRH, encoding a conserved putative protein with SNF2/helicase and PHD-finger domains from the 6q24 region.
Genomics 2003;82(2):153-61.
2003: Lisbeth Tranebjaerg; Tanya M Teslovich; MaryPat Jones; M. Michael Barmada; Toril Fagerheim; Arve Dahl; Diana Escolar; Jeffrey M. Trent; Elizabeth M Gillanders; Dietrich A Stephan
Genome-wide homozygosity mapping localizes a gene for autosomal recessive non-progressive infantile ataxia to 20q11-q13.
Human genetics 2003;113(3):293-5.
2003: S Lilly Zheng; Josyf C Mychaleckyj; Gregory A Hawkins; Sarah D Isaacs; Kathy E Wiley; Aubrey Turner; Bao-Li Chang; Chris Von Kap-Herr; John D Carpten; Mark J Pettenati; Eugene R Bleecker; Patrick C Walsh; Jeffrey M. Trent; Deborah A Meyers; William B Isaacs; Jianfeng Xu
Evaluation of DLC1 as a prostate cancer susceptibility gene: mutation screen and association study.
Mutation research 2003;528(1-2):45-53.
2003: Kristen M Carr; Michael Bittner; Jeffrey M. Trent
Gene-expression profiling in human cutaneous melanoma.
Oncogene 2003;22(20):3076-80.
2003: Pam Pollock; Karine A Cohen-Solal; Raman Sood; Jin Namkoong; Jeffrey J Martino; Aruna Koganti; Hua Zhu; Christiane Robbins; Izabela Makalowska; Seung-Shick Shin; Yari Marin; Kathleen G Roberts; Laura M Yudt; Amy Chen; Jun Cheng; Arturo Incao; Heather Pinkett; Christopher L Graham; Karen Dunn; Steven M Crespo-Carbone; Kerine R Mackason; Kevin B Ryan; Daniel Sinsimer; James S Goydos; Kenneth R Reuhl; Michael Eckhaus; Paul S Meltzer; William J Pavan; Jeffrey M. Trent; Suzie Chen
Melanoma mouse model implicates metabotropic glutamate signaling in melanocytic neoplasia.
Nature genetics 2003;34(1):108-12.
2003: Sally A Amundson; Richard Anthony Lee; Christine A Koch-Paiz; Michael Bittner; Paul Meltzer; Jeffrey M. Trent; Albert J Fornace
Differential responses of stress genes to low dose-rate gamma irradiation.
Molecular cancer research : MCR 2003;1(6):445-52.
2003: Ingrid Hedenfalk; Markus Ringner; Amir Ben-Dor; Zohar Yakhini; Yidong Chen; Gunilla Chebil; Robert Ach; Niklas Loman; Håkan Olsson; Paul Meltzer; Ake Borg; Jeffrey M. Trent
Molecular classification of familial non-BRCA1/BRCA2 breast cancer.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(5):2532-7.
2003: Jun Luo; William B Isaacs; Jeffrey M. Trent; David Duggan
Looking beyond morphology: cancer gene expression profiling using DNA microarrays.
Cancer investigation 2003;21(6):937-49.
2003: Pam Pollock; Ursula L Harper; Katherine S Hansen; Laura M Yudt; Mitchell Stark; Christiane M Robbins; Tracy Y Moses; Galen Hostetter; Urs Wagner; John Kakareka; Ghadi Salem; Thomas J Pohida; Peter Heenan; Paul H Duray; Olli Kallioniemi; Nicholas K Hayward; Jeffrey M. Trent; Paul S Meltzer
High frequency of BRAF mutations in nevi.
Nature genetics 2003;33(1):19-20.
2002: J D Carpten; C M Robbins; A Villablanca; L Forsberg; silvano presciuttini; J Bailey-Wilson; W F Simonds; E M Gillanders; A M Kennedy; J D Chen; S K Agarwal; R Sood; M P Jones; T Y Moses; C Haven; D Petillo; P D Leotlela; B Harding; D Cameron; A A Pannett; A Höög; H Heath; L A James-Newton; B Robinson; Richard J Zarbo; B M Cavaco; W Wassif; N D Perrier; I B Rosen; U Kristoffersson; P D Turnpenny; L-O Farnebo; G M Besser; C E Jackson; H Morreau; Jeffrey M. Trent; R V Thakker; S J Marx; Bin Tean Teh; C Larsson; M R Hobbs
HRPT2, encoding parafibromin, is mutated in hyperparathyroidism-jaw tumor syndrome.
Nature genetics 2002;32(4):676-80.
2002: Graham Casey; Phillippa J Neville; Sarah J Plummer; Ying Xiang; Lisa M Krumroy; Eric A Klein; William J Catalona; Nina N Nupponen; John D Carpten; Jeffrey M. Trent; Robert H Silverman; John S Witte
RNASEL Arg462Gln variant is implicated in up to 13% of prostate cancer cases.
Nature genetics 2002;32(4):581-3.
2002: Seungchan Kim; Edward R Dougherty; Ilya Shmulevich; Kenneth R Hess; Stanley R Hamilton; Jeffrey M. Trent; Gregory N Fuller; Wei Zhang
Identification of combination gene sets for glioma classification.
Molecular cancer therapeutics 2002;1(13):1229-36.
2002: Jianfeng Xu; S Lilly Zheng; Akira Komiya; Josyf C Mychaleckyj; Sarah D Isaacs; Jennifer Hu; David Sterling; Ethan M Lange; Gregory A Hawkins; Aubrey Turner; Charles M Ewing; Dennis A Faith; Jill R Johnson; Hiroyoshi Suzuki; Piroska Bujnovszky; Kathleen E Wiley; Angelo M DeMarzo; G Steven Bova; Baoli Chang; M Craig Hall; David L McCullough; Alan W Partin; Vahan S Kassabian; John D Carpten; Joan E Bailey-Wilson; Jeffrey M. Trent; Jill Ohar; Eugene R Bleecker; Patrick C Walsh; William B Isaacs; Deborah A Meyers
Germline mutations and sequence variants of the macrophage scavenger receptor 1 gene are associated with prostate cancer risk.
Nature genetics 2002;32(2):321-5.
2002: Yidong Chen; Vishnu Kamat; Edward R Dougherty; Michael Bittner; Paul S Meltzer; Jeffrey M. Trent
Ratio statistics of gene expression levels and applications to microarray data analysis.
Bioinformatics (Oxford, England) 2002;18(9):1207-15.
2002: yoganand balagurunathan; Edward R Dougherty; Yidong Chen; Michael Bittner; Jeffrey M. Trent
Simulation of cDNA microarrays via a parameterized random signal model.
Journal of biomedical optics 2002;7(3):507-23.
2002: Jun Luo; Thomas Dunn; Charles M Ewing; Jurga Sauvageot; Yidong Chen; Jeffrey M. Trent; William B Isaacs
Gene expression signature of benign prostatic hyperplasia revealed by cDNA microarray analysis.
The Prostate 2002;51(3):189-200.
2002: Sarah L Anzick; Jeffrey M. Trent
Role of genomics in identifying new targets for cancer therapy.
Oncology (Williston Park, N.Y.) 2002;16(5 Suppl 4):7-13.
2002: Annika Rökman; Tarja Ikonen; Eija H Seppälä; Nina N Nupponen; Ville Autio; Nina Mononen; Joan E Bailey-Wilson; Jeffrey M. Trent; John D Carpten; Mika P Matikainen; Pasi A Koivisto; Teuvo L J Tammela; Olli Kallioniemi; Johanna Schleutker
Germline alterations of the RNASEL gene, a candidate HPC1 gene at 1q25, in patients and families with prostate cancer.
American journal of human genetics 2002;70(5):1299-304.
2002: Jun Luo; Shan Zha; Wesley R Gage; Thomas A Dunn; Jessica L Hicks; Christina J Bennett; Charles M Ewing; Elizabeth A Platz; Sacha Ferdinandusse; Ronald J Wanders; Jeffrey M. Trent; William B Isaacs; Angelo M DeMarzo
Alpha-methylacyl-CoA racemase: a new molecular marker for prostate cancer.
Cancer research 2002;62(8):2220-6.
2002: Ashani T Weeraratna; Yuan Jiang; Galen Hostetter; Kevin P Rosenblatt; Paul H Duray; Michael Bittner; Jeffrey M. Trent
Wnt5a signaling directly affects cell motility and invasion of metastatic melanoma.
Cancer cell 2002;1(3):279-88.
2002: Xin-Yuan Guan; Hong En Zhang; Hang Zhou; Jonathan S T Sham; Jackie M-W Fung; Jeffrey M. Trent
Characterization of a complex chromosome rearrangement involving 6q in a melanoma cell line by chromosome microdissection.
Cancer genetics and cytogenetics 2002;134(1):65-70.
2002: Bao-Li Chang; S Lilly Zheng; Gregory A Hawkins; Sarah D Isaacs; Kathy E Wiley; Aubrey Turner; John D Carpten; Eugene R Bleecker; Patrick C Walsh; Jeffrey M. Trent; Deborah A Meyers; William B Isaacs; Jianfeng Xu
Joint effect of HSD3B1 and HSD3B2 genes is associated with hereditary and sporadic prostate cancer susceptibility.
Cancer research 2002;62(6):1784-9.
2002: Bao-Li Chang; S Lilly Zheng; Gregory A Hawkins; Sarah D Isaacs; Kathy E Wiley; Aubrey Turner; John D Carpten; Eugene R Bleecker; Patrick C Walsh; Jeffrey M. Trent; Deborah A Meyers; William B Isaacs; Jianfeng Xu
Polymorphic GGC repeats in the androgen receptor gene are associated with hereditary and sporadic prostate cancer risk.
Human genetics 2002;110(2):122-9.
2002: John B Harley; Jeffrey M. Trent; Daniel Kastner
American College of Rheumatology Basic Research Conference: Genetics and genomics in rheumatic disease.
Arthritis and rheumatism 2002;47(1):93-8.
2002: Albert J Fornace; Sally A Amundson; Khanh T Do; Paul Meltzer; Jeffrey M. Trent; Michael Bittner
Stress-gene induction by low-dose gamma irradiation.
Military medicine 2002;167(2 Suppl):13-5.
2002: J Carpten; N Nupponen; S Isaacs; R Sood; C Robbins; Jianfeng Xu; M Faruque; T Moses; C Ewing; E Gillanders; P Hu; P Bujnovszky; I Makalowska; A Baffoe-Bonnie; D Faith; J Smith; Dietrich A Stephan; K Wiley; M Brownstein; D Gildea; B Kelly; R Jenkins; Galen Hostetter; M Matikainen; J Schleutker; K Klinger; T Connors; Y Xiang; Z Wang; Angelo M DeMarzo; Nickolas Papadopoulos; Olli Kallioniemi; Robert D Burk; Deborah A Meyers; H Grönberg; P Meltzer; R Silverman; J Bailey-Wilson; Patrick C Walsh; William B Isaacs; Jeffrey M. Trent
Germline mutations in the ribonuclease L gene in families showing linkage with HPC1.
Nature genetics 2002;30(2):181-4.
2002: Elisabeth A Seftor; Paul S Meltzer; Dawn A Kirschmann; Jacob Pe'er; Andrew J Maniotis; Jeffrey M. Trent; Robert Folberg; Mary J C Hendrix
Molecular determinants of human uveal melanoma invasion and metastasis.
Clinical & experimental metastasis 2002;19(3):233-46.
2002: Seungchan Kim; Edward R Dougherty; Junior Barrera; Yidong Chen; Michael Bittner; Jeffrey M. Trent
Strong feature sets from small samples.
Journal of computational biology : a journal of computational molecular cell biology 2002;9(1):127-46.
2002: Edward R Dougherty; Junior Barrera; Marcel Brun; Seungchan Kim; Roberto M Cesar; Yidong Chen; Michael Bittner; Jeffrey M. Trent
Inference from clustering with application to gene-expression microarrays.
Journal of computational biology : a journal of computational molecular cell biology 2002;9(1):105-26.
2002: Ingrid Hedenfalk; Markus Ringnér; Jeffrey M. Trent; Ake Borg
Gene expression in inherited breast cancer.
Advances in cancer research 2002;84():1-34.
2002: Dietrich A Stephan; Gareth R Howell; Tanya M Teslovich; Alison J Coffey; Lorie Smith; Joan E Bailey-Wilson; Lindsay Malechek; Derek Gildea; Jeffrey R Smith; Elizabeth M Gillanders; Johanna Schleutker; Ping Hu; Helen E Steingruber; Pawandeep Dhami; Christiane M Robbins; Izabela Makalowska; John D Carpten; Raman Sood; Steve Mumm; Rolland Reinbold; Tom I Bonner; Agnes Baffoe-Bonnie; Lukas Bubendorf; Mervi Heiskanen; Olli P Kallioneimi; Andreas D Baxevanis; Shirin S Joseph; Ileana Zucchi; Robert D Burk; William B Isaacs; Mark T Ross; Jeffrey M. Trent
Physical and transcript map of the hereditary prostate cancer region at xq27.
Genomics 2002;79(1):41-50.
2002: Syed Shaheduzzaman; Vyjayanthi Krishnan; Ana Petrovic; Michael Bittner; Paul Meltzer; Jeffrey M. Trent; Sundararajan Venkatesan; Steven L Zeichner
Effects of HIV-1 Nef on cellular gene expression profiles.
Journal of biomedical science 2002;9(1):82-96.
2001: Isaac J Powell; J Carpten; Georgia M Dunston; Rick Kittles; J Bennett; Gerald Hoke; Curtis A Pettaway; Sally P Weinrich; S Vijayakumar; Chiledum Ahaghotu; W Boykin; T Mason; Charmaine Royal; Agnes B Baffoe-Bonnie; J Bailey-Wilson; K Berg; Jeffrey M. Trent; Francis S Collins
African-American heredity prostate cancer study: a model for genetic research.
Journal of the National Medical Association 2001;93(12 Suppl):25S-28S.
2001: R N Wiltshire; T R Dennis; vernon sondak; Paul S Meltzer; Jeffrey M. Trent
Application of molecular cytogenetic techniques in a case study of human cutaneous metastatic melanoma.
Cancer genetics and cytogenetics 2001;131(2):97-103.
2001: B Chang; S L Zheng; Sarah D Isaacs; Kathy E Wiley; John D Carpten; Gregory A Hawkins; Eugene R Bleecker; Patrick C Walsh; Jeffrey M. Trent; Deborah A Meyers; William B Isaacs; Jianfeng Xu
Linkage and association of CYP17 gene in hereditary and sporadic prostate cancer.
International journal of cancer. Journal international du cancer 2001;95(6):354-9.
2001: Sally A Amundson; Michael Bittner; Paul Meltzer; Jeffrey M. Trent; Albert J Fornace
Induction of gene expression as a monitor of exposure to ionizing radiation.
Radiation research 2001;156(5 Pt 2):657-61.
2001: Veronica C Nwosu; J Carpten; Jeffrey M. Trent; R Sheridan
Heterogeneity of genetic alterations in prostate cancer: evidence of the complex nature of the disease.
Human molecular genetics 2001;10(20):2313-8.
2001: Jianfeng Xu; S Lilly Zheng; Gregory A Hawkins; Dennis A Faith; B Kelly; Sarah D Isaacs; Kathy E Wiley; Baoli Chang; Charles M Ewing; Piroska Bujnovszky; John D Carpten; Eugene R Bleecker; Patrick C Walsh; Jeffrey M. Trent; Deborah A Meyers; William B Isaacs
Linkage and association studies of prostate cancer susceptibility: evidence for linkage at 8p22-23.
American journal of human genetics 2001;69(2):341-50.
2001: Julie A Douglas; Michael Boehnke; Elizabeth M Gillanders; Jeffrey M. Trent; Stephen B Gruber
Experimentally-derived haplotypes substantially increase the efficiency of linkage disequilibrium studies.
Nature genetics 2001;28(4):361-4.
2001: P W Ng; H Iha; Y Iwanaga; Michael Bittner; Yidong Chen; Yuan Jiang; Gerald C Gooden; Jeffrey M. Trent; Paul Meltzer; Kuan-Teh Jeang; Steven L Zeichner
Genome-wide expression changes induced by HTLV-1 Tax: evidence for MLK-3 mixed lineage kinase involvement in Tax-mediated NF-kappaB activation.
Oncogene 2001;20(33):4484-96.
2001: Sally A Amundson; Michael Bittner; Paul Meltzer; Jeffrey M. Trent; Albert J Fornace
Biological indicators for the identification of ionizing radiation exposure in humans.
Expert review of molecular diagnostics 2001;1(2):211-9.
2001: Sally A Amundson; Michael Bittner; Paul Meltzer; Jeffrey M. Trent; Albert J Fornace
Physiological function as regulation of large transcriptional programs: the cellular response to genotoxic stress.
Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology 2001;129(4):703-10.
2001: Jun Luo; David Duggan; Yidong Chen; Jurga Sauvageot; Charles M Ewing; Michael Bittner; Jeffrey M. Trent; William B Isaacs
Human prostate cancer and benign prostatic hyperplasia: molecular dissection by gene expression profiling.
Cancer research 2001;61(12):4683-8.
2001: Luigi Mariani; Christian Beaudry; Wendy S McDonough; Dominique Hoelzinger; Tim Demuth; K R Ross; Theresa J Berens; Stephen W Coons; G Watts; Jeffrey M. Trent; J S Wei; A Giese; Michael Berens
Glioma cell motility is associated with reduced transcription of proapoptotic and proliferation genes: a cDNA microarray analysis.
Journal of neuro-oncology 2001;53(2):161-76.
2001: S L Zheng; Jianfeng Xu; Sarah D Isaacs; Kathy E Wiley; B Chang; Eugene R Bleecker; Patrick C Walsh; Jeffrey M. Trent; Deborah A Meyers; William B Isaacs
Evidence for a prostate cancer linkage to chromosome 20 in 159 hereditary prostate cancer families.
Human genetics 2001;108(5):430-5.
2001: Mini Paulose-Murphy; N K Ha; C Xiang; Yidong Chen; L Gillim; Robert Yarchoan; Paul Meltzer; Michael Bittner; Jeffrey M. Trent; Steven L Zeichner
Transcription program of human herpesvirus 8 (kaposi's sarcoma-associated herpesvirus).
Journal of virology 2001;75(10):4843-53.
2001: Raman Sood; Tom Bonner; Izabela Makalowska; Dietrich A Stephan; Christiane M Robbins; TD Connors; Sharon D Morgenbesser; K Su; Mezbah U Faruque; Heather Pinkett; C Graham; Andreas D Baxevanis; Katherine W Klinger; Gregory M Landes; Jeffrey M. Trent; John D Carpten
Cloning and characterization of 13 novel transcripts and the human RGS8 gene from the 1q25 region encompassing the hereditary prostate cancer (HPC1) locus.
Genomics 2001;73(2):211-22.
2001: Isaac J Powell; J Carpten; Georgia M Dunston; Rick Kittles; J Bennett; Gerald Hoke; Curtis A Pettaway; Sally P Weinrich; S Vijayakumar; Chiledum Ahaghotu; W Boykin; T Mason; Charmaine Royal; Agnes B Baffoe-Bonnie; J Bailey-Wilson; K Berg; Jeffrey M. Trent; Francis S Collins
African-American heredity prostate cancer study: a model for genetic research.
Journal of the National Medical Association 2001;93(4):120-3.
2001: Jianfeng Xu; S Lilly Zheng; Baoli Chang; J R Smith; John D Carpten; O Colin Stine; Sarah D Isaacs; Kathy E Wiley; L Henning; Charles M Ewing; Piroska Bujnovszky; E R Bleeker; Patrick C Walsh; Jeffrey M. Trent; Deborah A Meyers; William B Isaacs
Linkage of prostate cancer susceptibility loci to chromosome 1.
Human genetics 2001;108(4):335-45.
2001: Jianfeng Xu; S Lilly Zheng; John D Carpten; Nina N Nupponen; Christiane M Robbins; J Mestre; Tracy Y Moses; Dennis A Faith; B D Kelly; Sarah D Isaacs; Kathy E Wiley; Charles M Ewing; Piroska Bujnovszky; Baoli Chang; Joan E Bailey-Wilson; Eugene R Bleecker; Patrick C Walsh; Jeffrey M. Trent; Deborah A Meyers; William B Isaacs
Evaluation of linkage and association of HPC2/ELAC2 in patients with familial or sporadic prostate cancer.
American journal of human genetics 2001;68(4):901-11.
2001: Y Fang; X Guan; Y Guo; J Sham; M Deng; Q Liang; H Li; H Zhang; H Zhou; Jeffrey M. Trent
Analysis of genetic alterations in primary nasopharyngeal carcinoma by comparative genomic hybridization.
Genes, chromosomes & cancer 2001;30(3):254-60.
2001: Ingrid Hedenfalk; DJ Duggan; Yidong Chen; Michael D Radmacher; Michael Bittner; R Simon; Paul Meltzer; B Gusterson; M Esteller; Olli Kallioniemi; Benjamin S Wilfond; Ake Borg; Jeffrey M. Trent; Mark Raffeld; Zohar Yakhini; Amir Ben-Dor; Edward R Dougherty; Juha Kononen; Lukas Bubendorf; W Fehrle; S Pittaluga; S Gruvberger; Niklas Loman; Oskar T Johannsson; Håkan Olsson; Guido Sauter
Gene-expression profiles in hereditary breast cancer.
The New England journal of medicine 2001;344(8):539-48.
2001: Yan Su; Jeffrey M. Trent
Isolation of tumor suppressor genes in melanoma by cDNA microarray.
Methods in molecular medicine 2001;61():15-29.
2001: X Y Guan; Jeffrey M. Trent
Chromosome Microdissection for Detection of Subchromosomal Alterations by FISH.
Methods in molecular medicine 2001;39():247-52.
2001: Yidong Chen; Zohar Yakhini; Amir Ben-Dor; Edward R Dougherty; Jeffrey M. Trent; Michael Bittner
Analysis of expression patterns: the scope of the problem, the problem of scope.
Disease markers 2001;17(2):59-65.
2001: Drazen Zimonjic; H Zhang; Z Shan; Valentina M Factor; Jeffrey M. Trent; Snorri S Thorgeirsson; Nicholas C Popescu
DNA amplification associated with double minutes originating from chromosome 19 in mouse hepatocellular carcinoma.
Cytogenetics and cell genetics 2001;93(1-2):114-6.
2001: Ritva Karhu; Minna Ahlstedt-Soini; Michael Bittner; P Meltzer; Jeffrey M. Trent; Jorma Isola
Chromosome arm-specific multicolor FISH.
Genes, chromosomes & cancer 2001;30(1):105-9.
2000: Pam Pollock; Jeffrey M. Trent
The genetics of cutaneous melanoma.
Clinics in laboratory medicine 2000;20(4):667-90.
2000: Johanna Schleutker; Mika P Matikainen; J Smith; Pasi A Koivisto; Agnes B Baffoe-Bonnie; Tommi Kainu; Elizabeth M Gillanders; R Sankila; E Pukkala; John D Carpten; Dietrich A Stephan; Teuvo Tammela; Michael J Brownstein; Joan E Bailey-Wilson; Jeffrey M. Trent; Olli Kallioniemi
A genetic epidemiological study of hereditary prostate cancer (HPC) in Finland: frequent HPCX linkage in families with late-onset disease.
Clinical cancer research : an official journal of the American Association for Cancer Research 2000;6(12):4810-5.
2000: Charmaine Royal; Agnes B Baffoe-Bonnie; Rick Kittles; Isaac J Powell; J Bennett; Gerald Hoke; C Pettaway; Sally P Weinrich; S Vijayakumar; Chiledum Ahaghotu; T Mason; E Johnson; M Obeikwe; C Simpson; R Mejia; W Boykin; P Roberson; J Frost; Louise Faison-Smith; C Meegan; N Foster; Paulette Furbert-Harris; J Carpten; J Bailey-Wilson; Jeffrey M. Trent; Kate Berg; Georgia M Dunston; Francis S Collins
Recruitment experience in the first phase of the African American Hereditary Prostate Cancer (AAHPC) study.
Annals of epidemiology 2000;10(8 Suppl):S68-77.
2000: Xin-Yuan Guan; Song-Bin Fu; J C Xia; Yan Fang; Jonathan S T Sham; B D Du; H Zhou; S Lu; Bing-quan Wang; Y Z Lin; Q Liang; X M Li; B Du; X M Ning; J R Du; P Li; Jeffrey M. Trent
Recurrent chromosome changes in 62 primary gastric carcinomas detected by comparative genomic hybridization.
Cancer genetics and cytogenetics 2000;123(1):27-34.
2000: Mark A Nelson; Michael D Radmacher; R Simon; Mikel Aickin; J Yang; L Panda; JC Emerson; D Roe; L Adair; F Thompson; Jerry Bangert; S P Leong; Raymond M Taetle; Sydney E Salmon; Jeffrey M. Trent
Chromosome abnormalities in malignant melanoma: clinical significance of nonrandom chromosome abnormalities in 206 cases.
Cancer genetics and cytogenetics 2000;122(2):101-9.
2000: Jon Thor Bergthorsson; Gudrun Johannesdottir; Adalgeir Arason; K R Benediktsdottir; Bjarni A Agnarsson; Joan E Bailey-Wilson; Elizabeth M Gillanders; J Smith; Jeffrey M. Trent; Rosa B Barkardottir
Analysis of HPC1, HPCX, and PCaP in Icelandic hereditary prostate cancer.
Human genetics 2000;107(4):372-5.
2000: Seungchan Kim; Edward R Dougherty; Michael Bittner; Yidong Chen; K Sivakumar; Paul Meltzer; Jeffrey M. Trent
General nonlinear framework for the analysis of gene interaction via multivariate expression arrays.
Journal of biomedical optics 2000;5(4):411-24.
2000: Päivikki Kauraniemi; Ingrid Hedenfalk; K Persson; DJ Duggan; Minna Tanner; Oskar T Johannsson; Håkan Olsson; Jeffrey M. Trent; Jorma Isola; Ake Borg
MYB oncogene amplification in hereditary BRCA1 breast cancer.
Cancer research 2000;60(19):5323-8.
2000: Xin-Yuan Guan; Y Fang; J S Sham; D L Kwong; Y Zhang; Q Liang; H Li; H Zhou; Jeffrey M. Trent
Recurrent chromosome alterations in hepatocellular carcinoma detected by comparative genomic hybridization.
Genes, chromosomes & cancer 2000;29(2):110-6.
2000: Sally A Amundson; Khanh T Do; S Shahab; Michael Bittner; Paul Meltzer; Jeffrey M. Trent; Albert J Fornace
Identification of potential mRNA biomarkers in peripheral blood lymphocytes for human exposure to ionizing radiation.
Radiation research 2000;154(3):342-6.
2000: K Kudoh; M Ramanna; Roald Ravatn; Abdel G Elkahloun; Michael Bittner; Paul S Meltzer; Jeffrey M. Trent; W S Dalton; Khew-Voon Chin
Monitoring the expression profiles of doxorubicin-induced and doxorubicin-resistant cancer cells by cDNA microarray.
Cancer research 2000;60(15):4161-6.
2000: Seungchan Kim; E R Dougherty; Yidong Chen; K Sivakumar; Paul Meltzer; Jeffrey M. Trent; Michael Bittner
Multivariate measurement of gene expression relationships.
Genomics 2000;67(2):201-9.
2000: Yan Su; Michael Bittner; Yidong Chen; L Tao; Y Jiang; Y Zhang; Dietrich A Stephan; Jeffrey M. Trent
Identification of tumor-suppressor genes using human melanoma cell lines UACC903, UACC903(+6), and SRS3 by comparison of expression profiles.
Molecular carcinogenesis 2000;28(2):119-27.
2000: Joop Wiegant; Vladimir Bezrookove; Carla Rosenberg; Hans J Tanke; Anton K Raap; H Zhang; Michael Bittner; Jeffrey M. Trent; P Meltzer
Differentially painting human chromosome arms with combined binary ratio-labeling fluorescence in situ hybridization.
Genome research 2000;10(6):861-5.
2000: Dietrich A Stephan; Yidong Chen; Y Jiang; L Malechek; J Z Gu; Christiane M Robbins; Michael Bittner; JA Morris; ED Carstea; Paul S Meltzer; K Adler; R Garlick; Jeffrey M. Trent; MA Ashlock
Positional cloning utilizing genomic DNA microarrays: the Niemann-Pick type C gene as a model system.
Molecular genetics and metabolism 2000;70(1):10-8.
2000: A J Carlisle; Vinay V Prabhu; Abdel G Elkahloun; J Hudson; Jeffrey M. Trent; W Marston Linehan; E D Williams; Michael R Emmert-Buck; Lance A Liotta; Peter J Munson; David B Krizman
Development of a prostate cDNA microarray and statistical gene expression analysis package.
Molecular carcinogenesis 2000;28(1):12-22.
2000: R Simon; Richard Desper; CH Papadimitriou; A Peng; David S Alberts; Raymond M Taetle; Jeffrey M. Trent; Alejandro A Schäffer
Chromosome abnormalities in ovarian adenocarcinoma: III. Using breakpoint data to infer and test mathematical models for oncogenesis.
Genes, chromosomes & cancer 2000;28(1):106-20.
2000: Raman Sood; Izabela Makalowska; John D Carpten; Christiane M Robbins; Dietrich A Stephan; TD Connors; Sharon D Morgenbesser; K Su; Heather Pinkett; C L Graham; M I Quesenberry; Andreas D Baxevanis; Katherine W Klinger; Jeffrey M. Trent; Tom Bonner
The human RGL (RalGDS-like) gene: cloning, expression analysis and genomic organization.
Biochimica et biophysica acta 2000;1491(1-3):285-8.
2000: S Ren; M J Smith; Iuri D Louro; Peggy R McKie-Bell; MR Bani; M Wagner; B Zochodne; David T Redden; William E Grizzle; N d Wang; David I Smith; R A Herbst; Walter Bardenheuer; Bertram Opalka; Jochen Schütte; Jeffrey M. Trent; Yaacov Ben David; J Michael Ruppert
The p44S10 locus, encoding a subunit of the proteasome regulatory particle, is amplified during progression of cutaneous malignant melanoma.
Oncogene 2000;19(11):1419-27.
2000: J Zhang; L X Zhang; P S Meltzer; J C Barrett; Jeffrey M. Trent
Molecular cloning of human Hic-5, a potential regulator involved in signal transduction and cellular senescence.
Molecular carcinogenesis 2000;27(3):177-83.
2000: John D Carpten; Izabela Makalowska; Christiane M Robbins; N Scott; Raman Sood; TD Connors; Tom Bonner; J R Smith; Mezbah U Faruque; Dietrich A Stephan; Heather Pinkett; Sharon D Morgenbesser; K Su; C Graham; Simon G Gregory; H Williams; L McDonald; Andreas D Baxevanis; K W Klingler; Gregory M Landes; Jeffrey M. Trent
A 6-Mb high-resolution physical and transcription map encompassing the hereditary prostate cancer 1 (HPC1) region.
Genomics 2000;64(1):1-14.
2000: Mervi Heiskanen; Michael Bittner; Yidong Chen; Javed Khan; K E Adler; Jeffrey M. Trent; Paul S Meltzer
Detection of gene amplification by genomic hybridization to cDNA microarrays.
Cancer research 2000;60(4):799-802.
2000: R Berry; Daniel J Schaid; J R Smith; Amy J French; JJ Schroeder; Shannon K McDonnell; Brett J Peterson; Z Y Wang; J D Carpten; S G Roberts; David J Tester; Michael L Blute; Jeffrey M. Trent; Stephen N Thibodeau
Linkage analyses at the chromosome 1 loci 1q24-25 (HPC1), 1q42.2-43 (PCAP), and 1p36 (CAPB) in families with hereditary prostate cancer.
American journal of human genetics 2000;66(2):539-46.
1999: Binoy Appukuttan; Elizabeth M Gillanders; Suh-Hang Hank Juo; Diana Freas-Lutz; S Ott; Raman Sood; A Van Auken; Joan E Bailey-Wilson; Xingchao Wang; RJ Patel; Christiane M Robbins; M Chung; G Annett; Kenneth I Weinberg; Mark Borchert; Jeffrey M. Trent; Michael J Brownstein; J Timothy Stout
Localization of a gene for Duane retraction syndrome to chromosome 2q31.
American journal of human genetics 1999;65(6):1639-46.
1999: Sang Kook Lee; Sarah L Anzick; JE Choi; L Bubendorf; XY Guan; Yong-Keun Jung; Olli Kallioniemi; Juha Kononen; Jeffrey M. Trent; David Azorsa; Byung Hak Jhun; J H Cheong; Young Chul Lee; Paul S Meltzer; Jae Woon Lee
A nuclear factor, ASC-2, as a cancer-amplified transcriptional coactivator essential for ligand-dependent transactivation by nuclear receptors in vivo.
The Journal of biological chemistry 1999;274(48):34283-93.
1999: L X Qin; Z Y Tang; J S Sham; Zeng-Chen Ma; Sheng-Long Ye; X D Zhou; Zhi-Quan Wu; Jeffrey M. Trent; X Y Guan
The association of chromosome 8p deletion and tumor metastasis in human hepatocellular carcinoma.
Cancer research 1999;59(22):5662-5.
1999: Javed Khan; Michael Bittner; Lao H Saal; U Teichmann; David Azorsa; Gerald C Gooden; William J Pavan; Jeffrey M. Trent; Paul S Meltzer
cDNA microarrays detect activation of a myogenic transcription program by the PAX3-FKHR fusion oncogene.
Proceedings of the National Academy of Sciences of the United States of America 1999;96(23):13264-9.
1999: Jose Marcelino; John D Carpten; WM Suwairi; O M Gutierrez; Stuart Schwartz; Christiane Robbins; Raman Sood; Izabela Makalowska; Andreas D Baxevanis; B Johnstone; Ronald Laxer; L Zemel; Chong A Kim; J K Herd; J Ihle; C Williams; M Johnson; V Raman; Luis Alonso; Decio Brunoni; A Gerstein; Nickolas Papadopoulos; Sultan A Bahabri; Jeffrey M. Trent; Matthew L Warman
CACP, encoding a secreted proteoglycan, is mutated in camptodactyly-arthropathy-coxa vara-pericarditis syndrome.
Nature genetics 1999;23(3):319-22.
1999: Andrew J Maniotis; Robert Folberg; A Hess; Elisabeth A Seftor; L M G Gardner; Jacob Pe'er; Jeffrey M. Trent; Paul S Meltzer; Mary J C Hendrix
Vascular channel formation by human melanoma cells in vivo and in vitro: vasculogenic mimicry.
The American journal of pathology 1999;155(3):739-52.
1999: LW Whitney; K G Becker; Nancy Tresser; C I Caballero-Ramos; Peter J Munson; Vinay V Prabhu; Jeffrey M. Trent; Henry McFarland; William E Biddison
Analysis of gene expression in mutiple sclerosis lesions using cDNA microarrays.
Annals of neurology 1999;46(3):425-8.
1999: Stacie K Loftus; Yidong Chen; Gerald C Gooden; Joseph F Ryan; G Birznieks; M Hilliard; Andreas D Baxevanis; Michael Bittner; Paul Meltzer; Jeffrey M. Trent; William J Pavan
Informatic selection of a neural crest-melanocyte cDNA set for microarray analysis.
Proceedings of the National Academy of Sciences of the United States of America 1999;96(16):9277-80.
1999: Michael Bittner; Paul Meltzer; Jeffrey M. Trent
Data analysis and integration: of steps and arrows.
Nature genetics 1999;22(3):213-5.
1999: Raymond M Taetle; Mikel Aickin; JM Yang; L Panda; JC Emerson; D Roe; L Adair; F Thompson; Y Liu; L Wisner; John Davis; Jeffrey M. Trent; David S Alberts
Chromosome abnormalities in ovarian adenocarcinoma: I. Nonrandom chromosome abnormalities from 244 cases.
Genes, chromosomes & cancer 1999;25(3):290-300.
1999: Henrik Grönberg; J Smith; Monica Emanuelsson; Björn-Anders Jonsson; Anders Bergh; John D Carpten; William B Isaacs; Jianfeng Xu; Deborah A Meyers; Jeffrey M. Trent; Jan-Erik Damber
In Swedish families with hereditary prostate cancer, linkage to the HPC1 locus on chromosome 1q24-25 is restricted to families with early-onset prostate cancer.
American journal of human genetics 1999;65(1):134-40.
1999: Sally A Amundson; Michael Bittner; Yidong Chen; Jeffrey M. Trent; Paul Meltzer; Albert J Fornace
Fluorescent cDNA microarray hybridization reveals complexity and heterogeneity of cellular genotoxic stress responses.
Oncogene 1999;18(24):3666-72.
1999: J Zhang; A A Glatfelter; R Taetle; Jeffrey M. Trent
Frequent alterations of evolutionarily conserved regions of chromosome 1 in human malignant melanoma.
Cancer genetics and cytogenetics 1999;111(2):119-23.
1999: Raymond M Taetle; Mikel Aickin; L Panda; JC Emerson; D Roe; F Thompson; John Davis; Jeffrey M. Trent; David S Alberts
Chromosome abnormalities in ovarian adenocarcinoma: II. Prognostic impact of nonrandom chromosome abnormalities in 244 cases.
Genes, chromosomes & cancer 1999;25(1):46-52.
1999: Javed Khan; Michael Bittner; Yidong Chen; Paul S Meltzer; Jeffrey M. Trent
DNA microarray technology: the anticipated impact on the study of human disease.
Biochimica et biophysica acta 1999;1423(2):M17-28.
1999: EF Nuwaysir; Michael Bittner; Jeffrey M. Trent; J Carl Barrett; Cynthia A Afshari
Microarrays and toxicology: the advent of toxicogenomics.
Molecular carcinogenesis 1999;24(3):153-9.
1999: Dietrich A Stephan; Elizabeth M Gillanders; D Vanderveen; Diana Freas-Lutz; G Wistow; Andreas D Baxevanis; Christiane M Robbins; A VanAuken; M I Quesenberry; Joan E Bailey-Wilson; Suh-Hang Hank Juo; Jeffrey M. Trent; L Smith; Michael J Brownstein
Progressive juvenile-onset punctate cataracts caused by mutation of the gammaD-crystallin gene.
Proceedings of the National Academy of Sciences of the United States of America 1999;96(3):1008-12.
1999: Javed Khan; Lao H Saal; Michael Bittner; Yidong Chen; Jeffrey M. Trent; Paul S Meltzer
Expression profiling in cancer using cDNA microarrays.
Electrophoresis 1999;20(2):223-9.
1999: Aurelia Meloni-Ehrig; Zhong Chen; XY Guan; M Notohamiprodjo; RR Shepard; Suzanne S Spanier; Jeffrey M. Trent; Avery A Sandberg
Identification of a ring chromosome in a myxoid malignant fibrous histiocytoma with chromosome microdissection and fluorescence in situ hybridization.
Cancer genetics and cytogenetics 1999;109(1):81-5.
1999: Mark A Nelson; Maria-Eugenia Ariza; JM Yang; FH Thompson; Raymond M Taetle; Jeffrey M. Trent; J Wymer; KS Massey-Brown; M Broome-Powell; J Easton; Jill Lahti; Vincent J Kidd
Abnormalities in the p34cdc2-related PITSLRE protein kinase gene complex (CDC2L) on chromosome band 1p36 in melanoma.
Cancer genetics and cytogenetics 1999;108(2):91-9.
1999: Albert J Fornace; Sally A Amundson; Michael Bittner; Timothy G Myers; Paul Meltzer; J N Weinsten; Jeffrey M. Trent
The complexity of radiation stress responses: analysis by informatics and functional genomics approaches.
Gene expression 1999;7(4-6):387-400.
1999: DJ Duggan; Michael Bittner; Yidong Chen; Paul Meltzer; Jeffrey M. Trent
Expression profiling using cDNA microarrays.
Nature genetics 1999;21(1 Suppl):10-4.
1999: Vishwanath R Iyer; Michael B Eisen; Douglas T Ross; G Schuler; T Moore; JC Lee; Jeffrey M. Trent; Louis M Staudt; J Hudson; Mark S Boguski; DA Lashkari; D Shalon; David Botstein; Patrick O Brown
The transcriptional program in the response of human fibroblasts to serum.
Science (New York, N.Y.) 1999;283(5398):83-7.
1998: Stephen B Gruber; MM Entius; Gloria M Petersen; SJ Laken; P A Longo; R Boyer; Al Levin; Urvi Mujumdar; Jeffrey M. Trent; Kenneth W Kinzler; Bert Vogelstein; Stanley R Hamilton; Mihael H Polymeropoulos; G Johan A Offerhaus; Francis M Giardiello
Pathogenesis of adenocarcinoma in Peutz-Jeghers syndrome.
Cancer research 1998;58(23):5267-70.
1998: XY Guan; H Zhang; JM Yang; J Wang; Raymond M Taetle; Paul S Meltzer; Jeffrey M. Trent
Detection of chromosome 6 abnormalities in melanoma cell lines by chromosome arm painting probes.
Cancer genetics and cytogenetics 1998;107(2):89-92.
1998: Javed Khan; R Simon; Michael Bittner; Yidong Chen; S B Leighton; Thomas J Pohida; Paul D Smith; Yuan Jiang; Gerald C Gooden; Jeffrey M. Trent; Paul S Meltzer
Gene expression profiling of alveolar rhabdomyosarcoma with cDNA microarrays.
Cancer research 1998;58(22):5009-13.
1998: Jianfeng Xu; Deborah A Meyers; D Freije; S Isaacs; K Wiley; D Nusskern; C Ewing; E Wilkens; P Bujnovszky; G Steven Bova; Patrick C Walsh; William B Isaacs; J Schleutker; M Matikainen; T Tammela; T Visakorpi; Olli Kallioniemi; R Berry; D Schaid; A French; S McDonnell; J Schroeder; M Blute; S Thibodeau; H Grönberg; M Emanuelsson; J E Damber; A Bergh; B A Jonsson; J Smith; J Bailey-Wilson; J Carpten; Dietrich A Stephan; E Gillanders; I Amundson; T Kainu; D Freas-Lutz; A Baffoe-Bonnie; A Van Aucken; R Sood; Francis S Collins; M Brownstein; Jeffrey M. Trent
Evidence for a prostate cancer susceptibility locus on the X chromosome.
Nature genetics 1998;20(2):175-9.
1998: O Ermolaeva; M Rastogi; Kim D Pruitt; G D Schuler; Michael Bittner; Yidong Chen; R Simon; Paul Meltzer; Jeffrey M. Trent; Mark S Boguski
Data management and analysis for gene expression arrays.
Nature genetics 1998;20(1):19-23.
1998: U Teichmann; Michael E Ray; J Ellison; C Graham; G Wistow; Paul S Meltzer; Jeffrey M. Trent; William J Pavan
Cloning and tissue expression of the mouse ortholog of AIM1, a betagamma-crystallin superfamily member.
Mammalian genome : official journal of the International Mammalian Genome Society 1998;9(9):715-20.
1998: K G Becker; R M Simon; Joan E Bailey-Wilson; B Freidlin; W E Biddison; Henry McFarland; Jeffrey M. Trent
Clustering of non-major histocompatibility complex susceptibility candidate loci in human autoimmune diseases.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(17):9979-84.
1998: Zhong Chen; M Notohamiprodjo; XY Guan; Elisabeth Paietta; S Blackwell; K Stout; A Turner; Kathleen E Richkind; Jeffrey M. Trent; A Lamb; Avery A Sandberg
Gain of 9p in the pathogenesis of polycythemia vera.
Genes, chromosomes & cancer 1998;22(4):321-4.
1998: W Yan; Leslie K Jacobsen; Donna Krasnewich; X Y Guan; Marge Lenane; S P Paul; H N Dalwadi; Heping Zhang; Robert T Long; Sanjiv Kumra; Brian M Martin; P J Scambler; Jeffrey M. Trent; Ellen Sidransky; Edward I Ginns; Judy Rapoport
Chromosome 22q11.2 interstitial deletions among childhood-onset schizophrenics and "multidimensionally impaired".
American journal of medical genetics 1998;81(1):41-3.
1998: Steffen Dietzel; Anna Jauch; D Kienle; G Qu; Heidi Holtgreve-Grez; Roland Eils; C Münkel; Michael Bittner; P S Meltzer; Jeffrey M. Trent; Thomas Cremer
Separate and variably shaped chromosome arm domains are disclosed by chromosome arm painting in human cell nuclei.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 1998;6(1):25-33.
1997: H Grönberg; J Xu; J R Smith; John D Carpten; Sarah D Isaacs; Diha Freije; G Steven Bova; J E Danber; A Bergh; Patrick C Walsh; Francis S Collins; Jeffrey M. Trent; Deborah A Meyers; William B Isaacs
Early age at diagnosis in families providing evidence of linkage to the hereditary prostate cancer locus (HPC1) on chromosome 1.
Cancer research 1997;57(21):4707-9.
1997: H Grönberg; Sarah D Isaacs; J R Smith; John D Carpten; G Steven Bova; Diha Freije; J Xu; Deborah A Meyers; Francis S Collins; Jeffrey M. Trent; Patrick C Walsh; William B Isaacs
Characteristics of prostate cancer in families potentially linked to the hereditary prostate cancer 1 (HPC1) locus.
JAMA : the journal of the American Medical Association 1997;278(15):1251-5.
1997: Sarah L Anzick; Juha Kononen; RL Walker; David Azorsa; MM Tanner; XY Guan; Guido Sauter; Olli Kallioniemi; Jeffrey M. Trent; Paul S Meltzer
AIB1, a steroid receptor coactivator amplified in breast and ovarian cancer.
Science (New York, N.Y.) 1997;277(5328):965-8.
1997: Zhong Chen; T A Grebe; XY Guan; M Notohamiprodjo; P J Nutting; JF Stone; Jeffrey M. Trent; Avery A Sandberg
Maternal balanced translocation leading to partial duplication of 4q and partial deletion of 1p in a son: cytogenetic and FISH studies using band-specific painting probes generated by chromosome microdissection.
American journal of medical genetics 1997;71(2):160-6.
1997: J H Barks; FH Thompson; Raymond M Taetle; JM Yang; JF Stone; J A Wymer; R Khavari; XY Guan; Jeffrey M. Trent; D Pinkel; Mark A Nelson
Increased chromosome 20 copy number detected by fluorescence in situ hybridization (FISH) in malignant melanoma.
Genes, chromosomes & cancer 1997;19(4):278-85.
1997: K L DeYoung; Michael E Ray; Yan A Su; Sarah L Anzick; Ricky Johnstone; J A Trapani; Paul S Meltzer; Jeffrey M. Trent
Cloning a novel member of the human interferon-inducible gene family associated with control of tumorigenicity in a model of human melanoma.
Oncogene 1997;15(4):453-7.
1997: T Lin; Jeffrey M. Trent; D Milliken; D S Shimm; R Donaldson; A B Hill
Increased frequency of P-glycoprotein gene amplification in colchicine-resistant Rat-1 clones transformed by v-src.
Cancer genetics and cytogenetics 1997;96(2):157-65.
1997: FH Thompson; Raymond M Taetle; Jeffrey M. Trent; Y Liu; KS Massey-Brown; Katherine M Scott; Ronald S Weinstein; JC Emerson; David S Alberts; Mark A Nelson
Band 1p36 abnormalities and t(1;17) in ovarian carcinoma.
Cancer genetics and cytogenetics 1997;96(2):106-10.
1997: Michael E Ray; G Wistow; Yan A Su; Paul S Meltzer; Jeffrey M. Trent
AIM1, a novel non-lens member of the betagamma-crystallin superfamily, is associated with the control of tumorigenicity in human malignant melanoma.
Proceedings of the National Academy of Sciences of the United States of America 1997;94(7):3229-34.
1997: K A Smith; Olga Chernova; R P Groves; M B Stark; J L Martínez; J N Davidson; Jeffrey M. Trent; Thomas E Patterson; A Agarwal; P Duncan; Munna L Agarwal; George R Stark
Multiple mechanisms of N-phosphonacetyl-L-aspartate resistance in human cell lines: carbamyl-P synthetase/aspartate transcarbamylase/dihydro-orotase gene amplification is frequent only when chromosome 2 is rearranged.
Proceedings of the National Academy of Sciences of the United States of America 1997;94(5):1816-21.
1997: E Gracia; Michael E Ray; Mihael H Polymeropoulos; AM Dehejia; Paul S Meltzer; Jeffrey M. Trent
Isolation of chromosome-specific ESTs by microdissection-mediated cDNA capture.
Genome research 1997;7(2):100-7.
1997: C Y Linder; Abdel G Elkahloun; Michael Bittner; Jeffrey M. Trent; Paul S Meltzer
Restriction mapping of recombinant cosmid clones using lambda terminase and field inversion gel electrophoresis.
Analytical biochemistry 1997;245(1):105-7.
1997: G J Papanicolaou; NZ Parsa; Paul S Meltzer; Jeffrey M. Trent; G J Pappanicolaou
Assignment of interferon gamma receptor (IFNGR1) to human chromosome bands 6q24.1-->q24.2 by in situ hybridization.
Cytogenetics and cell genetics 1997;76(3-4):181-2.
1997: Paul S Meltzer; X Y Guan; Yan A Su; E Gracia; Jeffrey M. Trent
Identification of region specific genes by chromosome microdissection.
Cancer genetics and cytogenetics 1997;93(1):29-32.
1997: Jeffrey M. Trent; Michael Bittner; J Zhang; R Wiltshire; M Ray; Y Su; E Gracia; Paul Meltzer; J De Risi; L Penland; P Brown
Use of microgenomic technology for analysis of alterations in DNA copy number and gene expression in malignant melanoma.
Clinical and experimental immunology 1997;107 Suppl 1():33-40.
1996: J H Lee; M E Miele; DJ Hicks; K K Phillips; Jeffrey M. Trent; Bernard E Weissman; D R Welch
KiSS-1, a novel human malignant melanoma metastasis-suppressor gene.
Journal of the National Cancer Institute 1996;88(23):1731-7.
1996: Mark A Nelson; F H Thompson; JC Emerson; Mikel Aickin; L Adair; Jeffrey M. Trent; S P Leong; Raymond M Taetle
Clinical implications of cytogenetic abnormalities in melanoma.
The Surgical clinics of North America 1996;76(6):1257-71.
1996: David B Krizman; Rodrigo F Chuaqui; Paul S Meltzer; Jeffrey M. Trent; Paul H Duray; W Marston Linehan; Lance A Liotta; Michael R Emmert-Buck
Construction of a representative cDNA library from prostatic intraepithelial neoplasia.
Cancer research 1996;56(23):5380-3.
1996: Joe L DeRisi; L Penland; Patrick O Brown; Michael Bittner; Paul S Meltzer; M Ray; Yidong Chen; Yan A Su; Jeffrey M. Trent
Use of a cDNA microarray to analyse gene expression patterns in human cancer.
Nature genetics 1996;14(4):457-60.
1996: J R Smith; Diha Freije; John D Carpten; Henrik Grönberg; Jianfeng Xu; Sarah D Isaacs; M J Brownstein; G Steven Bova; H Guo; P Bujnovszky; D R Nusskern; J E Damber; A Bergh; M Emanuelsson; Olli Kallioniemi; J Walker-Daniels; J E Bailey-Wilson; Terri H beaty; Deborah A Meyers; Patrick C Walsh; Francis S Collins; Jeffrey M. Trent; William B Isaacs
Major susceptibility locus for prostate cancer on chromosome 1 suggested by a genome-wide search.
Science (New York, N.Y.) 1996;274(5291):1371-4.
1996: Christoph Cremer; C Münkel; M Granzow; Anna Jauch; Steffen Dietzel; Roland Eils; X Y Guan; P S Meltzer; Jeffrey M. Trent; Jörg Langowski; Thomas Cremer
Nuclear architecture and the induction of chromosomal aberrations.
Mutation research 1996;366(2):97-116.
1996: D J Brooks; S Woodward; F H Thompson; B Dos Santos; M Russell; JM Yang; XY Guan; Jeffrey M. Trent; D S Alberts; Raymond M Taetle
Expression of the zinc finger gene EVI-1 in ovarian and other cancers.
British journal of cancer 1996;74(10):1518-25.
1996: XY Guan; D Horsman; H E Zhang; N Z Parsa; Paul S Meltzer; Jeffrey M. Trent
Localization by chromosome microdissection of a recurrent breakpoint region on chromosome 6 in human B-cell lymphoma.
Blood 1996;88(4):1418-22.
1996: XY Guan; Jianfeng Xu; Sarah L Anzick; H Zhang; Jeffrey M. Trent; Paul S Meltzer
Hybrid selection of transcribed sequences from microdissected DNA: isolation of genes within amplified region at 20q11-q13.2 in breast cancer.
Cancer research 1996;56(15):3446-50.
1996: MM Tanner; Mika Tirkkonen; Anne Kallioniemi; Jorma Isola; Tuula Kuukasjärvi; Colin Collins; David Kowbel; XY Guan; Jeffrey M. Trent; Joe Gray; Paul Meltzer; Olli Kallioniemi
Independent amplification and frequent co-amplification of three nonsyntenic regions on the long arm of chromosome 20 in human breast cancer.
Cancer research 1996;56(15):3441-5.
1996: Yan A Su; Michael E Ray; T Lin; Nancy E Seidel; David M Bodine; Paul S Meltzer; Jeffrey M. Trent
Reversion of monochromosome-mediated suppression of tumorigenicity in malignant melanoma by retroviral transduction.
Cancer research 1996;56(14):3186-91.
1996: M R Bani; Janusz Rak; D Adachi; R Wiltshire; Jeffrey M. Trent; Robert S Kerbel; Yaacov Ben David
Multiple features of advanced melanoma recapitulated in tumorigenic variants of early stage (radial growth phase) human melanoma cell lines: evidence for a dominant phenotype.
Cancer research 1996;56(13):3075-86.
1996: Michael E Ray; Yan A Su; Paul S Meltzer; Jeffrey M. Trent
Isolation and characterization of genes associated with chromosome-6 mediated tumor suppression in human malignant melanoma.
Oncogene 1996;12(12):2527-33.
1996: E Gracia; U Fischer; Abdel G Elkahloun; Jeffrey M. Trent; E Meese; Paul S Meltzer
Isolation of genes amplified in human cancers by microdissection mediated cDNA capture.
Human molecular genetics 1996;5(5):595-600.
1996: Yan A Su; C M Hutter; Jeffrey M. Trent; Paul S Meltzer
Complete sequence analysis of a gene (OS-9) ubiquitously expressed in human tissues and amplified in sarcomas.
Molecular carcinogenesis 1996;15(4):270-5.
1996: F H Thompson; Mark A Nelson; Jeffrey M. Trent; XY Guan; Y Liu; JM Yang; JC Emerson; L Adair; J Wymer; Celia A Balfour; K Massey; R Weinstein; D S Alberts; Raymond M Taetle
Amplification of 19q13.1-q13.2 sequences in ovarian cancer. G-band, FISH, and molecular studies.
Cancer genetics and cytogenetics 1996;87(1):55-62.
1996: Paul E McKeever; T R Dennis; A C Burgess; Paul S Meltzer; D A Marchuk; Jeffrey M. Trent
Chromosome breakpoint at 17q11.2 and insertion of DNA from three different chromosomes in a glioblastoma with exceptional glial fibrillary acidic protein expression.
Cancer genetics and cytogenetics 1996;87(1):41-7.
1996: Abdel G Elkahloun; Paul S Meltzer; XY Guan; J S McNinch; Jeffrey M. Trent; P J de Jong
Isolation of a cosmid sublibrary for a region of chromosome 12 frequently amplified in human cancers using a complex chromosome microdissection probe.
Genomics 1996;31(3):343-7.
1996: Cristina Morelli; T Sherratt; MJ Greaves; L Iwanejko; Cecilia Trabanelli; Paola Rimessi; Francesca Gualandi; Massimo Negrini; Giuseppe Barbanti-Brodano; Jeffrey M. Trent; John M Boyle
Physical analysis of part of band 6q21 harboring a putative tumor suppressor gene and a putative senescence gene.
DNA sequence : the journal of DNA sequencing and mapping 1996;7(1):43-5.
1996: L M Cummings; Jeffrey M. Trent; D A Marchuk
Identification and mapping of type 1 neurofibromatosis (NF1) homologous loci.
Cytogenetics and cell genetics 1996;73(4):334-40.
1996: XY Guan; H Zhang; Michael Bittner; Y Jiang; Paul Meltzer; Jeffrey M. Trent
Chromosome arm painting probes.
Nature genetics 1996;12(1):10-1.
1995: Mieke Schutte; LT da Costa; Christopher A Moskaluk; E Rozenblum; X Guan; P J de Jong; Michael Bittner; P S Meltzer; Jeffrey M. Trent; Scott E Kern
Isolation of YAC insert sequences by representational difference analysis.
Nucleic acids research 1995;23(20):4127-33.
1995: J Zhang; P Cui; A A Glatfelter; L M Cummings; Paul S Meltzer; Jeffrey M. Trent
Microdissection based cloning of a translocation breakpoint in a human malignant melanoma.
Cancer research 1995;55(20):4640-5.
1995: J R Smith; John D Carpten; M J Brownstein; S Ghosh; Victoria L Magnuson; D A Gilbert; Jeffrey M. Trent; Francis S Collins
Approach to genotyping errors caused by nontemplated nucleotide addition by Taq DNA polymerase.
Genome research 1995;5(3):312-7.
1995: R N Wiltshire; P Duray; Michael Bittner; T Visakorpi; Paul S Meltzer; R J Tuthill; L A Liotta; Jeffrey M. Trent
Direct visualization of the clonal progression of primary cutaneous melanoma: application of tissue microdissection and comparative genomic hybridization.
Cancer research 1995;55(18):3954-7.
1995: F H Thompson; JC Emerson; S Olson; R Weinstein; S A Leavitt; S P Leong; Scott S Emerson; Jeffrey M. Trent; Mark A Nelson; Sydney E Salmon
Cytogenetics of 158 patients with regional or disseminated melanoma. Subset analysis of near-diploid and simple karyotypes.
Cancer genetics and cytogenetics 1995;83(2):93-104.
1995: XY Guan; C B Cargile; Sarah L Anzick; F H Thompson; Paul S Meltzer; Michael Bittner; Raymond M Taetle; J R McGill; Jeffrey M. Trent
Chromosome microdissection identifies cryptic sites of DNA sequence amplification in human ovarian carcinoma.
Cancer research 1995;55(15):3380-5.
1995: L K Su; M Burrell; David E Hill; J Gyuris; R Brent; R Wiltshire; Jeffrey M. Trent; Bert Vogelstein; Kenneth W Kinzler
APC binds to the novel protein EB1.
Cancer research 1995;55(14):2972-7.
1995: Mieke Schutte; LT da Costa; Stephan Hahn; Christopher A Moskaluk; A T Hoque; E Rozenblum; C L Weinstein; Michael Bittner; P S Meltzer; Jeffrey M. Trent
Identification by representational difference analysis of a homozygous deletion in pancreatic carcinoma that lies within the BRCA2 region.
Proceedings of the National Academy of Sciences of the United States of America 1995;92(13):5950-4.
1995: XY Guan; Paul S Meltzer; A C Burgess; Jeffrey M. Trent
Coverage of chromosome 6 by chromosome microdissection: generation of 14 subregion-specific probes.
Human genetics 1995;95(6):637-40.
1995: David B Krizman; T A Hofmann; U DeSilva; Eric Green; Paul S Meltzer; Jeffrey M. Trent
Identification of 3'-terminal exons from yeast artificial chromosomes.
PCR methods and applications 1995;4(6):322-6.
1995: B C Liang; Paul S Meltzer; XY Guan; Jeffrey M. Trent
Gene amplification elucidated by combined chromosomal microdissection and comparative genomic hybridization.
Cancer genetics and cytogenetics 1995;80(1):55-9.
1995: Eckart Meese; H W Müller; Nicole Brass; Jeffrey M. Trent; N Blin
Assignment of Alu-repetitive sequences to large restriction fragments from human chromosomes 6 and 22.
Molecular biology reports 1995;21(2):81-4.
1995: Jeffrey M. Trent; R Wiltshire; L K Su; N C Nicolaides; Bert Vogelstein; Kenneth W Kinzler
The gene for the APC-binding protein beta-catenin (CTNNB1) maps to chromosome 3p22, a region frequently altered in human malignancies.
Cytogenetics and cell genetics 1995;71(4):343-4.
1995: G J Pappas; Mihael H Polymeropoulos; J M Boyle; Jeffrey M. Trent
Regional assignment by hybrid mapping of 36 expressed sequence tags (ESTs) on human chromosome 6.
Genomics 1995;25(1):124-9.
1995: Jeffrey M. Trent; B Weber; XY Guan; J Zhang; Francis S Collins; K Abel; A Diamond; Paul Meltzer
Microdissection and microcloning of chromosomal alterations in human breast cancer.
Breast cancer research and treatment 1995;33(2):95-102.
1995: Klaus B Piontek; H W Müller; Ulrike Fischer; E Göttert; M A Batzer; P S Meltzer; Jeffrey M. Trent; Eckart Meese
Generation and characterization of a human chromosome 6-specific hncDNA library from a somatic cell hybrid.
Cytogenetics and cell genetics 1995;69(3-4):273-8.
1995: G J Pappas; E Thompson; A Burgess; A Greenwood; Jeffrey M. Trent
Generation and molecular cytogenetic characterization of a radiation-reduction hybrid panel for human chromosome 6.
Cytogenetics and cell genetics 1995;69(3-4):201-6.
1995: Drazen Zimonjic; L J Rezanka; C H Evans; Mihael H Polymeropoulos; Jeffrey M. Trent; N C Popescu
Mapping of the immune interferon gamma gene (IFNG) to chromosome band 12q14 by fluorescence in situ hybridization.
Cytogenetics and cell genetics 1995;71(3):247-8.
1994: S R Wilt; A C Burgess; Daniel Normolle; Jeffrey M. Trent; Theodore S Lawrence
Use of fluorescence in situ hybridization (FISH) to study chromosomal damage induced by radiation and bromodeoxyuridine in human colon cancer cells.
International journal of radiation oncology, biology, physics 1994;30(4):861-6.
1994: XY Guan; Paul S Meltzer; W S Dalton; Jeffrey M. Trent
Identification of cryptic sites of DNA sequence amplification in human breast cancer by chromosome microdissection.
Nature genetics 1994;8(2):155-61.
1994: Yan A Su; Jeffrey M. Trent; XY Guan; Paul S Meltzer
Direct isolation of genes encoded within a homogeneously staining region by chromosome microdissection.
Proceedings of the National Academy of Sciences of the United States of America 1994;91(19):9121-5.
1994: F H Thompson; Y Liu; JC Emerson; R Weinstein; R Makar; Jeffrey M. Trent; Raymond M Taetle; D S Alberts
Simple numeric abnormalities as primary karyotype changes in ovarian carcinoma.
Genes, chromosomes & cancer 1994;10(4):262-6.
1994: K J Martell; S Kwak; D J Hakes; Jack E Dixon; Jeffrey M. Trent
Chromosomal localization of four human VH1-like protein-tyrosine phosphatases.
Genomics 1994;22(2):462-4.
1994: Michael E Ray; XY Guan; M L Slovak; Jeffrey M. Trent; Paul S Meltzer
Rapid detection, cloning and molecular cytogenetic characterisation of sequences from an MRP-encoding amplicon by chromosome microdissection.
British journal of cancer 1994;70(1):85-90.
1994: S R Weiler; S M Taylor; R J Deans; J Kan-Mitchell; Malcolm S Mitchell; Jeffrey M. Trent
Assignment of a human melanoma associated gene MG50 (D2S448) to chromosome 2p25.3 by fluorescence in situ hybridization.
Genomics 1994;22(1):243-4.
1994: XY Guan; Paul S Meltzer; Jeffrey M. Trent
Rapid generation of whole chromosome painting probes (WCPs) by chromosome microdissection.
Genomics 1994;22(1):101-7.
1994: bhushan hardas; J Zhang; Jeffrey M. Trent; James T Elder
Direct evidence for homologous sequences on the paracentric regions of human chromosome 1.
Genomics 1994;21(2):359-63.
1994: S A Jankowski; D S Mitchell; S H Smith; Jeffrey M. Trent; Paul S Meltzer
SAS, a gene amplified in human sarcomas, encodes a new member of the transmembrane 4 superfamily of proteins.
Oncogene 1994;9(4):1205-11.
1994: B C Liang; D A Ross; Harry S Greenberg; Paul S Meltzer; Jeffrey M. Trent
Evidence of allelic imbalance of chromosome 6 in human astrocytomas.
Neurology 1994;44(3 Pt 1):533-6.
1994: P J Lagoda; Jeffrey M. Trent; E U Meese
Chromosome specific c-DNA libraries: reduction of unspecific priming events by purification of heteronuclear RNA.
Molecular biology reports 1994;19(2):89-92.
1994: K A Brayton; Z Chen; G Zhou; P L Nagy; A Gavalas; Jeffrey M. Trent; L L Deaven; J E Dixon; Howard Zalkin
Two genes for de novo purine nucleotide synthesis on human chromosome 4 are closely linked and divergently transcribed.
The Journal of biological chemistry 1994;269(7):5313-21.
1994: Ira Gantz; Tadataka Yamada; T Tashiro; Y Konda; Y Shimoto; H Miwa; Jeffrey M. Trent
Mapping of the gene encoding the melanocortin-1 (alpha-melanocyte stimulating hormone) receptor (MC1R) to human chromosome 16q24.3 by Fluorescence in situ hybridization.
Genomics 1994;19(2):394-5.
1993: P Dal Cin; Jeffrey M. Trent
What should oncologists know about cytogenetics in solid tumors?
Annals of oncology : official journal of the European Society for Medical Oncology / ESMO 1993;4(10):821-4.
1993: E Rodriguez; Jane Houldsworth; Victor E Reuter; P Meltzer; J Zhang; Jeffrey M. Trent; George J Bosl; Raju S K Chaganti
Molecular cytogenetic analysis of i(12p)-negative human male germ cell tumors.
Genes, chromosomes & cancer 1993;8(4):230-6.
1993: Wafik S El-Deiry; T Tokino; Victor E Velculescu; D B Levy; R Parsons; Jeffrey M. Trent; D Lin; W E Mercer; Kenneth W Kinzler; Bert Vogelstein
WAF1, a potential mediator of p53 tumor suppression.
Cell 1993;75(4):817-25.
1993: I Song; D R Brown; R N Wiltshire; Ira Gantz; Jeffrey M. Trent; Tadataka Yamada
The human gastrin/cholecystokinin type B receptor gene: alternative splice donor site in exon 4 generates two variant mRNAs.
Proceedings of the National Academy of Sciences of the United States of America 1993;90(19):9085-9.
1993: J Zhang; Jeffrey M. Trent; Paul S Meltzer
Rapid isolation and characterization of amplified DNA by chromosome microdissection: identification of IGF1R amplification in malignant melanoma.
Oncogene 1993;8(10):2827-31.
1993: A B Hill; Jeffrey M. Trent; F H Thompson; M K Danks; William T Beck
Loss of tumorigenicity in a methotrexate-resistant human leukemia cell line.
Cancer genetics and cytogenetics 1993;70(1):48-55.
1993: XY Guan; Jeffrey M. Trent; Paul S Meltzer
Generation of band-specific painting probes from a single microdissected chromosome.
Human molecular genetics 1993;2(8):1117-21.
1993: Jeffrey M. Trent; JM Yang; JC Emerson; W Dalton; D McGee; K Massey; F Thompson; H Villar
Clonal chromosome abnormalities in human breast carcinomas. II. Thirty-four cases with metastatic disease.
Genes, chromosomes & cancer 1993;7(4):194-203.
1993: Paul S Meltzer; XY Guan; Jeffrey M. Trent
Telomere capture stabilizes chromosome breakage.
Nature genetics 1993;4(3):252-5.
1993: J Zhang; Paul Meltzer; R Jenkins; XY Guan; Jeffrey M. Trent
Application of chromosome microdissection probes for elucidation of BCR-ABL fusion and variant Philadelphia chromosome translocations in chronic myelogenous leukemia.
Blood 1993;81(12):3365-71.
1993: S L Church; J W Grant; Lisa A Ridnour; L W Oberley; P E Swanson; P S Meltzer; Jeffrey M. Trent
Increased manganese superoxide dismutase expression suppresses the malignant phenotype of human melanoma cells.
Proceedings of the National Academy of Sciences of the United States of America 1993;90(7):3113-7.
1993: R N Wiltshire; Victor M Elner; T Dennis; A K Vine; Jeffrey M. Trent
Cytogenetic analysis of posterior uveal melanoma.
Cancer genetics and cytogenetics 1993;66(1):47-53.
1993: Jeffrey M. Trent; P S Meltzer
The last shall be first.
Nature genetics 1993;3(2):101-2.
1993: P J Wilkie; Mihael H Polymeropoulos; Jeffrey M. Trent; K W Small; J L Weber
Genetic and physical map of 11 short tandem repeat polymorphisms on human chromosome 6.
Genomics 1993;15(1):225-7.
1993: H Yu; R Thun; Settara C Chandrasekharappa; Jeffrey M. Trent; J Zhang; Miriam H Meisler
Human PCK1 encoding phosphoenolpyruvate carboxykinase is located on chromosome 20q13.2.
Genomics 1993;15(1):219-21.
1993: JC Emerson; Sydney E Salmon; W Dalton; D L McGee; JM Yang; F H Thompson; Jeffrey M. Trent
Cytogenetics and clinical correlations in breast cancer.
Advances in experimental medicine and biology 1993;330():107-18.
1993: Jeffrey M. Trent; A Ziegler
Report of the First International Workshop on Human Chromosome 6 Mapping. Ann Arbor, Michigan, June 7-9, 1992.
Cytogenetics and cell genetics 1993;62(2-3):67-87.
1992: I Song; D R Brown; Tadataka Yamada; Jeffrey M. Trent
Mapping of the gene encoding the beta-subunit of H+,K(+)-ATPase to human chromosome 13q34 by fluorescence in situ hybridization.
Genomics 1992;14(4):1114-5.
1992: S L Church; J W Grant; E U Meese; Jeffrey M. Trent
Sublocalization of the gene encoding manganese superoxide dismutase (MnSOD/SOD2) to 6q25 by fluorescence in situ hybridization and somatic cell hybrid mapping.
Genomics 1992;14(3):823-5.
1992: XY Guan; Paul S Meltzer; J Cao; Jeffrey M. Trent
Rapid generation of region-specific genomic clones by chromosome microdissection: isolation of DNA from a region frequently deleted in malignant melanoma.
Genomics 1992;14(3):680-4.
1992: I Song; Tadataka Yamada; Jeffrey M. Trent
Mapping of the gene encoding the alpha-subunit of the human H+,K(+)-ATPase to chromosome 19q13.1 by fluorescent in situ hybridization.
Genomics 1992;14(2):547-8.
1992: Robert M Gemmill; M J Mendez; C M Dougherty; S Paulien; M Liao; D Mitchell; S A Jankowski; Jeffrey M. Trent; C Berger; Avery A Sandberg
Isolation of a yeast artificial chromosome clone that spans the (12;16) translocation breakpoint characteristic of myxoid liposarcoma.
Cancer genetics and cytogenetics 1992;62(2):166-70.
1992: James T Elder; A Aström; U Pettersson; John J Voorhees; Jeffrey M. Trent
Assignment of the human CRABP-II gene to chromosome 1q21 by nonisotopic in situ hybridization.
Human genetics 1992;89(5):487-90.
1992: Paul S Meltzer; XY Guan; A Burgess; Jeffrey M. Trent
Rapid generation of region specific probes by chromosome microdissection and their application.
Nature genetics 1992;1(1):24-8.
1992: Eckart Meese; Paul S Meltzer; P W Ferguson; Jeffrey M. Trent
Alu-PCR: characterization of a chromosome 6-specific hybrid mapping panel and cloning of chromosome-specific markers.
Genomics 1992;12(3):549-54.
1992: Eckart Meese; C M Witkowski; Huda Y Zoghbi; Eric J Stanbridge; Paul S Meltzer; Jeffrey M. Trent
Development and utilization of a somatic cell hybrid mapping panel to assign NotI linking probes to the long arm of human chromosome 6.
Genomics 1992;12(3):542-8.
1992: Eckart Meese; Susan B. Horwitz; Jeffrey M. Trent
Evidence for linear extrachromosomal elements mediating gene amplification in the multidrug-resistant J774.2 murine cell line.
Cancer genetics and cytogenetics 1992;59(1):20-5.
1991: J Bridge; S P Leong; A C Burgess; F Thompson; Jeffrey M. Trent
Examination of clonal variants from human malignant melanoma studied by chromosome banding analysis.
Melanoma research 1991;1(4):289-96.
1991: D Millikin; Eckart Meese; Bert Vogelstein; C Witkowski; Jeffrey M. Trent
Loss of heterozygosity for loci on the long arm of chromosome 6 in human malignant melanoma.
Cancer research 1991;51(20):5449-53.
1991: R Herzog; E Gottert; W Henn; K Zang; N Blin; Jeffrey M. Trent; Eckart Meese
Large-scale physical mapping within the region 22q12.3-13.1 in meningioma.
Genomics 1991;10(4):1041-6.
1991: Marilyn L Slovak; Shelagh E L Mirski; SUSAN COLE; JH Gerlach; K H Yohem; Jeffrey M. Trent
Tumourigenic multidrug-resistant HT1080 cells do not overexpress receptors for epidermal growth factor.
British journal of cancer 1991;64(2):296-8.
1991: Jeffrey M. Trent
Cytogenetics of human malignant melanoma.
Cancer metastasis reviews 1991;10(2):103-13.
1991: Charles W Taylor; William S Dalton; P R Parrish; M C Gleason; William T Bellamy; F H Thompson; Denise J Roe; Jeffrey M. Trent
Different mechanisms of decreased drug accumulation in doxorubicin and mitoxantrone resistant variants of the MCF7 human breast cancer cell line.
British journal of cancer 1991;63(6):923-9.
1991: Paul Meltzer; A Leibovitz; W Dalton; H Villar; T Kute; John Davis; Raymond B Nagle; Jeffrey M. Trent
Establishment of two new cell lines derived from human breast carcinomas with HER-2/neu amplification.
British journal of cancer 1991;63(5):727-35.
1991: Barbara M Mueller; C A Romerdahl; Jeffrey M. Trent; R A Reisfeld
Suppression of spontaneous melanoma metastasis in scid mice with an antibody to the epidermal growth factor receptor.
Cancer research 1991;51(8):2193-8.
1991: William T Bellamy; William S Dalton; M C Gleason; Thomas M Grogan; Jeffrey M. Trent
Development and characterization of a melphalan-resistant human multiple myeloma cell line.
Cancer research 1991;51(3):995-1002.
1991: B Weiffenbach; Jeffrey M. Trent; C Frye; C Witkowski
Single copy probe CRI-L1065 (D6S21) maps to 6cen-6q21.
Nucleic acids research 1991;19(1):199.
1991: Marilyn L Slovak; M Coccia; Paul S Meltzer; Jeffrey M. Trent
Molecular analysis of two human doxorubicin-resistant cell lines: evidence for differing multidrug resistance mechanisms.
Anticancer research 1991;11(1):423-8.
1990: Leonard A Zwelling; M L Slovak; James Doroshow; M Hinds; D Chan; E Parker; J Mayes; K L Sie; P S Meltzer; Jeffrey M. Trent
HT1080/DR4: a P-glycoprotein-negative human fibrosarcoma cell line exhibiting resistance to topoisomerase II-reactive drugs despite the presence of a drug-sensitive topoisomerase II.
Journal of the National Cancer Institute 1990;82(19):1553-61.
1990: Harinder Garewal; Paul Meltzer; Jeffrey M. Trent; R Prabhala; Richard E Sampliner; M Korc
Epidermal growth factor receptor overexpression and trisomy 7 in a case of Barrett's esophagus.
Digestive diseases and sciences 1990;35(9):1115-20.
1990: H McBride; Baldassarre Stea; A Hill; Jeffrey M. Trent
Possible relationship between chromosome alterations and in vitro cellular radiosensitivity of human malignant melanoma.
International journal of radiation oncology, biology, physics 1990;19(2):349-55.
1990: Jeffrey M. Trent; Frank L Meyskens; S E Salmon; K Ryschon; Stanley P L Leong; John Davis; D L McGee
Relation of cytogenetic abnormalities and clinical outcome in metastatic melanoma.
The New England journal of medicine 1990;322(21):1508-11.
1990: Eckart Meese; S Olson; L Leis; Jeffrey M. Trent
Quick method for high yields of lambda bacteriophage DNA.
Nucleic acids research 1990;18(7):1923.
1990: N S Vlahos; Bernard W Futscher; N K Hora; Jeffrey M. Trent; L C Erickson
Gene amplification affecting O(6)-alkylguanine-DNA alkyltransferase activity is not detected in nitrosourea resistant or sensitive human cell lines.
Carcinogenesis 1990;11(3):479-83.
1990: Jeffrey M. Trent; Eric J Stanbridge; H L McBride; Eckart Meese; G Casey; D E Araujo; C M Witkowski; Raymond B Nagle
Tumorigenicity in human melanoma cell lines controlled by introduction of human chromosome 6.
Science (New York, N.Y.) 1990;247(4942):568-71.
1990: Jeffrey M. Trent
Genetic basis of cancer.
Current opinion in oncology 1990;2(1):134-7.
1990: J T Rutka; Jeffrey M. Trent; Mark L Rosenblum
Molecular probes in neuro-oncology: a review.
Cancer investigation 1990;8(3-4):425-38.
1990: F Mitelman; Y Kaneko; Jeffrey M. Trent
Report of the committee on chromosome changes in neoplasia.
Cytogenetics and cell genetics 1990;55(1-4):358-86.
1989: Jeffrey M. Trent
Clinical correlations of chromosome change in human solid tumors: the tip of the iceberg?
Journal of the National Cancer Institute 1989;81(24):1852-3.
1989: H S Garewal; Richard E Sampliner; Y Liu; Jeffrey M. Trent
Chromosomal rearrangements in Barrett's esophagus. A premalignant lesion of esophageal adenocarcinoma.
Cancer genetics and cytogenetics 1989;42(2):281-6.
1989: Eckart Meese; Paul S Meltzer; C M Witkowski; Jeffrey M. Trent
Molecular mapping of the oncogene MYB and rearrangements in malignant melanoma.
Genes, chromosomes & cancer 1989;1(1):88-94.
1989: W G Harker; D L Slade; W S Dalton; P S Meltzer; Jeffrey M. Trent
Multidrug resistance in mitoxantrone-selected HL-60 leukemia cells in the absence of P-glycoprotein overexpression.
Cancer research 1989;49(16):4542-9.
1989: Eckart Meese; Paul Meltzer; Jeffrey M. Trent
Application of natural partial digests to pulsed-field gel analysis of the amplified MDR locus.
Genomics 1989;5(2):371-4.
1989: Jeffrey M. Trent; F H Thompson; Frank L Meyskens
Identification of a recurring translocation site involving chromosome 6 in human malignant melanoma.
Cancer research 1989;49(2):420-3.
1989: Jeffrey M. Trent; Y Kaneko; F Mitelman
Report of the committee on structural chromosome changes in neoplasia.
Cytogenetics and cell genetics 1989;51(1-4):533-62.
1989: Jeffrey M. Trent; Stanley P L Leong; Frank L Meyskens
Chromosome alterations in human malignant melanoma.
Carcinogenesis; a comprehensive survey 1989;11():165-86.
1988: A Kovnat; RN Buick; B Choo; E De Harven; I Kopelyan; Jeffrey M. Trent; I F Tannock
Malignant properties of sublines selected from a human bladder cancer cell line that contains an activated c-Ha-ras oncogene.
Cancer research 1988;48(17):4993-5000.
1988: M L Slovak; Len Lothstein; Susan B. Horwitz; Jeffrey M. Trent
Molecular/cytogenetic alterations accompanying the development of multidrug resistance in the J774.2 murine cell line.
Leukemia 1988;2(7):453-8.
1988: M L Slovak; Gerald A Hoeltge; William S Dalton; Jeffrey M. Trent
Pharmacological and biological evidence for differing mechanisms of doxorubicin resistance in two human tumor cell lines.
Cancer research 1988;48(10):2793-7.
1988: William S Dalton; A E Cress; D S Alberts; Jeffrey M. Trent
Cytogenetic and phenotypic analysis of a human colon carcinoma cell line resistant to mitoxantrone.
Cancer research 1988;48(7):1882-8.
1988: A B Hill; William T Beck; Jeffrey M. Trent
Cytogenetic and molecular characterization of tumors in nude mice derived from a multidrug-resistant human leukemia cell line.
Cancer research 1988;48(2):393-8.
1988: C Ludwig; J Harper; Claire M Payne; Raymond B Nagle; G Bastert; Jeffrey M. Trent
Cellular and genetic properties of two melanoma cell lines established from the same tumor.
Anticancer research 1988;8(1):9-16.
1988: Jeffrey M. Trent; Y Kaneko; F Mitelman
Report of the committee on structural chromosome changes in neoplasia.
Cytogenetics and cell genetics 1988;49(1-3):236-53.
1987: M L Slovak; Gerald A Hoeltge; Jeffrey M. Trent
Cytogenetic alterations associated with the acquisition of doxorubicin resistance: possible significance of chromosome 7 alterations.
Cancer research 1987;47(24 Pt 1):6646-52.
1987: William T Beck; M C Cirtain; Mary K Danks; R L Felsted; A R Safa; J S Wolverton; D P Suttle; Jeffrey M. Trent
Pharmacological, molecular, and cytogenetic analysis of "atypical" multidrug-resistant human leukemic cells.
Cancer research 1987;47(20):5455-60.
1987: Robert T Dorr; J D Liddil; Jeffrey M. Trent; William S Dalton
Mitomycin C resistant L1210 leukemia cells: association with pleiotropic drug resistance.
Biochemical pharmacology 1987;36(19):3115-20.
1987: Jeffrey M. Trent; Irwin L Flink; Eugene Morkin; P van Tuinen; David Ledbetter
Localization of the human thyroxine-binding globulin gene to the long arm of the X chromosome (Xq21-22).
American journal of human genetics 1987;41(3):428-35.
1987: D T Drayna; J W McLean; K L Wion; Jeffrey M. Trent; Harry A Drabkin; R M Lawn
Human apolipoprotein D gene: gene sequence, chromosome localization, and homology to the alpha 2u-globulin superfamily.
DNA (Mary Ann Liebert, Inc.) 1987;6(3):199-204.
1987: Jeffrey M. Trent; C M Witkowski
Clarification of the chromosomal assignment of the human P-glycoprotein/mdr1 gene: possible coincidence with the cystic fibrosis and c-met oncogene.
Cancer genetics and cytogenetics 1987;26(1):187-90.
1987: Kenneth W Kinzler; S H Bigner; D D Bigner; Jeffrey M. Trent; M L Law; S J O'Brien; A J Wong; Bert Vogelstein
Identification of an amplified, highly expressed gene in a human glioma.
Science (New York, N.Y.) 1987;236(4797):70-3.
1987: D R Bell; Jeffrey M. Trent; H F Willard; John R Riordan; V Ling
Chromosomal location of human P-glycoprotein gene sequences.
Cancer genetics and cytogenetics 1987;25(1):141-8.
1987: C Kent Osborne; K Hobbs; Jeffrey M. Trent
Biological differences among MCF-7 human breast cancer cell lines from different laboratories.
Breast cancer research and treatment 1987;9(2):111-21.
1987: C D Bloomfield; Jeffrey M. Trent; H van den Berghe
Report of the committee on structural chromosome changes in neoplasia.
Cytogenetics and cell genetics 1987;46(1-4):344-66.
1987: Jorge Filmus; Jeffrey M. Trent; M N Pollak; R N Buick
Epidermal growth factor receptor gene-amplified MDA-468 breast cancer cell line and its nonamplified variants.
Molecular and cellular biology 1987;7(1):251-7.
1987: Jeffrey M. Trent; F H Thompson
Methods for chromosome banding of human and experimental tumors in vitro.
Methods in enzymology 1987;151():267-79.
1986: Jorge Filmus; Jeffrey M. Trent; R Pullano; RN Buick
A cell line from a human ovarian carcinoma with amplification of the K-ras gene.
Cancer research 1986;46(10):5179-82.
1986: P E Crossen; B G Durie; Jeffrey M. Trent
Generation time (GT) of human bone marrow cells cultured in the CFC-gm assay.
Cell and tissue kinetics 1986;19(5):533-8.
1986: P E Crossen; Eugene W Gerner; C W Bell; Jeffrey M. Trent
Analysis of the length of S-phase required to show sister chromatid differential staining.
Cell and tissue kinetics 1986;19(5):527-32.
1986: Frederick R Ahmann; L Woo; M Hendrix; Jeffrey M. Trent
Growth in semisolid agar of prostate cancer cells obtained from bone marrow aspirates.
Cancer research 1986;46(7):3560-4.
1986: M Korc; Paul Meltzer; Jeffrey M. Trent
Enhanced expression of epidermal growth factor receptor correlates with alterations of chromosome 7 in human pancreatic cancer.
Proceedings of the National Academy of Sciences of the United States of America 1986;83(14):5141-4.
1986: A T Look; Stephen Peiper; E C Douglass; Jeffrey M. Trent; C J Sherr
Amplification of genes encoding human myeloid membrane antigens after DNA-mediated gene transfer.
Blood 1986;67(3):637-45.
1986: Kenneth W Kinzler; B A Zehnbauer; G M Brodeur; Robert C Seeger; Jeffrey M. Trent; P S Meltzer; Bert Vogelstein
Amplification units containing human N-myc and c-myc genes.
Proceedings of the National Academy of Sciences of the United States of America 1986;83(4):1031-5.
1986: Jeffrey M. Trent; K Crickard; Z Gibas; A Goodacre; S Pathak; A A Sandberg; F Thompson; J Whang-Peng; Sandra R Wolman
Methodologic advances in the cytogenetic analysis of human solid tumors.
Cancer genetics and cytogenetics 1986;19(1-2):57-66.
1986: J M J C Scheres; T W Hustinx; Jeffrey M. Trent
Possible involvement of unstable sites on chromosomes 7 and 14 in human cancer.
Cancer genetics and cytogenetics 1986;19(1-2):151-8.
1986: K A Graham; Jeffrey M. Trent; C Kent Osborne; C M McGrath; M D Minden; R N Buick
The use of restriction fragment polymorphisms to identify the cell line MCF-7.
Breast cancer research and treatment 1986;8(1):29-34.
1986: Jeffrey M. Trent; Paul Meltzer; Mark L Rosenblum; G Harsh; Kenneth W Kinzler; R Mashal; Andrew P Feinberg; Bert Vogelstein
Evidence for rearrangement, amplification, and expression of c-myc in a human glioblastoma.
Proceedings of the National Academy of Sciences of the United States of America 1986;83(2):470-3.
1986: Paul Meltzer; Kenneth W Kinzler; Bert Vogelstein; Jeffrey M. Trent
Gene amplification in cancer: a molecular cytogenetic approach.
Cancer genetics and cytogenetics 1986;19(1-2):93-9.
1986: Jeffrey M. Trent; Eugene W Gerner; R Broderick; P E Crossen
Cell cycle analysis using bromodeoxyuridine: comparison of methods for analysis of total cell transit time.
Cancer genetics and cytogenetics 1986;19(1-2):43-50.
1985: B R Greenberg; T M Grogan; B J Takasugi; Jeffrey M. Trent; M J Hicks; B G Durie
A unique malignant T-cell lymphoproliferative disorder with neutropenia simulating hairy cell leukemia.
Cancer 1985;56(12):2823-30.
1985: B G Durie; E Vela; V Baum; A Leibovitz; Claire M Payne; L C Richter; Thomas M Grogan; Jeffrey M. Trent
Establishment of two new myeloma cell lines from bilateral pleural effusions: evidence for sequential in vivo clonal change.
Blood 1985;66(3):548-55.
1985: John R Riordan; K Deuchars; Norbert Kartner; Noa Alon; Jeffrey M. Trent; V Ling
Amplification of P-glycoprotein genes in multidrug-resistant mammalian cell lines.
Nature 1985;316(6031):817-9.
1985: RN Buick; R Pullano; Jeffrey M. Trent
Comparative properties of five human ovarian adenocarcinoma cell lines.
Cancer research 1985;45(8):3668-76.
1985: P S Meltzer; Y C Cheng; Jeffrey M. Trent
Analysis of dihydrofolate reductase gene amplification in a methotrexate-resistant human tumor cell line.
Cancer genetics and cytogenetics 1985;17(4):289-300.
1985: K A Graham; C L Richardson; M D Minden; Jeffrey M. Trent; R N Buick
Varying degrees of amplification of the N-ras oncogene in the human breast cancer cell line MCF-7.
Cancer research 1985;45(5):2201-5.
1985: Jeffrey M. Trent; J Casper; Paul Meltzer; F Thompson; J Fogh
Nonrandom chromosome alterations in rhabdomyosarcoma.
Cancer genetics and cytogenetics 1985;16(3):189-97.
1985: P E Crossen; R D Broderick; B G Durie; Jeffrey M. Trent
Proliferative characteristics and sister chromatid exchange (SCE) of colony-forming cells (CFU-S) in acute myelogenous leukemia.
Cancer genetics and cytogenetics 1985;14(3-4):267-73.
1985: S C Bock; J F Harris; I Balazs; Jeffrey M. Trent
Assignment of the human antithrombin III structural gene to chromosome 1q23-25.
Cytogenetics and cell genetics 1985;39(1):67-9.
1985: Jeffrey M. Trent; F H Thompson; R N Buick
Generation of clonal variants in a human ovarian carcinoma studied by chromosome banding analysis.
Cancer genetics and cytogenetics 1985;14(1-2):153-61.
1985: Jeffrey M. Trent
Cytogenetic and molecular biologic alterations in human breast cancer: a review.
Breast cancer research and treatment 1985;5(3):221-9.
1985: PE Crossen; M P Bodger; Jeffrey M. Trent
Proliferative characteristics of human haemopoietic cells in culture.
Cytobios 1985;43(174S):307-11.
1984: M Schwab; Harold Varmus; John M Bishop; K H Grzeschik; Susan Naylor; A Y Sakaguchi; G Brodeur; Jeffrey M. Trent
Chromosome localization in normal human cells and neuroblastomas of a gene related to c-myc.
Nature 1984;308(5956):288-91.
1984: Jeffrey M. Trent; R N Buick; S Olson; R C Horns; R T Schimke
Cytologic evidence for gene amplification in methotrexate-resistant cells obtained from a patient with ovarian adenocarcinoma.
Journal of clinical oncology : official journal of the American Society of Clinical Oncology 1984;2(1):8-15.
1984: Jeffrey M. Trent; T Stanisic; S Olson
Cytogenetic analysis of urologic malignancies: study of tumor colony forming cells and premature chromosome condensation.
The Journal of urology 1984;131(1):146-51.
1984: Jeffrey M. Trent; F H Thompson; C Ludwig
Evidence for selection of homogeneously staining regions in a human melanoma cell line.
Cancer research 1984;44(1):233-7.
1983: J T Casper; Jeffrey M. Trent; J Harb; V Piaskowski; M Helmsworth; J Finlan; Daniel Von Hoff
Distinguishing characteristics of a new neuroblastoma cell line.
Cancer genetics and cytogenetics 1983;10(2):177-86.
1983: J W Hardin; M E Riser; Jeffrey M. Trent; Peter O Kohler
The chorionic gonadotropin alpha-subunit gene is on human chromosome 18 in JEG cells.
Proceedings of the National Academy of Sciences of the United States of America 1983;80(20):6282-5.
1983: M Schwab; K Alitalo; K H Klempnauer; Harold Varmus; John M Bishop; F Gilbert; G Brodeur; M Goldstein; Jeffrey M. Trent
Amplified DNA with limited homology to myc cellular oncogene is shared by human neuroblastoma cell lines and a neuroblastoma tumour.
Nature 1983;305(5931):245-8.
1983: C Kent Osborne; D H Boldt; G M Clark; Jeffrey M. Trent
Effects of tamoxifen on human breast cancer cell cycle kinetics: accumulation of cells in early G1 phase.
Cancer research 1983;43(8):3583-5.
1983: Jeffrey M. Trent; S B Rosenfeld; F L Meyskens
Chromosome 6q involvement in human malignant melanoma.
Cancer genetics and cytogenetics 1983;9(2):177-80.
1983: Jeffrey M. Trent; B G Durie; John Davis; I Veomett
Cytogenetic and clinical assessment of six patients with erythroleukemia.
Anticancer research 1983;3(2):111-6.
1983: William J Mackillop; Jeffrey M. Trent; S S Stewart; R N Buick
Tumor progression studied by analysis of cellular features of serial ascitic ovarian carcinoma tumors.
Cancer research 1983;43(2):874-8.
1983: Jeffrey M. Trent; John Davis; B G Durie
Cytogenetic analysis of leukaemic colonies from acute and chronic myelogenous leukaemia.
British journal of cancer 1983;47(1):103-9.
1982: Jeffrey M. Trent; S Olson; R M Lawn
Chromosomal localization of human leukocyte, fibroblast, and immune interferon genes by means of in situ hybridization.
Proceedings of the National Academy of Sciences of the United States of America 1982;79(24):7809-13.
1981: Jeffrey M. Trent
Recent advances in cancer cytogenetics.
Arizona medicine 1981;38(11):836-9.
1981: Jeffrey M. Trent; S E Salmon
Karyotypic analysis of human ovarian carcinoma cells cloned in short term agar culture.
Cancer genetics and cytogenetics 1981;3(4):279-91.
1981: T H Stanisic; R N Buick; Jeffrey M. Trent; S E Fry; S E Salmon
An in vitro clonal assay for bladder cancer: studies of the biologic potential of the urothelium and determination of in vitro sensitivity to cytotoxic agents.
Journal of surgical oncology 1981;18(1):67-72.
1981: Jeffrey M. Trent; David A Carlin; John Davis
Expression of silver-stained nucleolar organizing regions (Ag-NORs) in human cancer.
Cytogenetics and cell genetics 1981;30(1):31-8.
1980: Daniel Von Hoff; J Casper; E Bradley; Jeffrey M. Trent; A Hodach; C Reichert; R Makuch; A Altman
Direct cloning of human neuroblastoma cells in soft agar culture.
Cancer research 1980;40(10):3591-7.
1980: Jeffrey M. Trent
Probing the genetic complement of cancer: possible roles for double minutes in malignancy.
Gastroenterology 1980;79(2):392-3.
1980: Jeffrey M. Trent; S E Salmon
Human tumour karyology: marked analytic improvement by short-term agar culture.
British journal of cancer 1980;41(6):867-74.
1980: Jeffrey M. Trent; J R Davis; Claire M Payne
The establishment and morphologic characterization of finite cell lines from normal human endometrium.
American journal of obstetrics and gynecology 1980;136(3):352-62.
1980: J T Casper; Jeffrey M. Trent; Daniel Von Hoff
Cloning of human neuroblastoma cells in soft agar.
Progress in clinical and biological research 1980;48():101-11.
1980: Jeffrey M. Trent
Cytogenetic analysis of human tumor cells cloned in agar.
Progress in clinical and biological research 1980;48():165-77.
1980: Jeffrey M. Trent
Protocols of procedures and techniques in chromosome analysis of tumor stem cell cultures in soft agar.
Progress in clinical and biological research 1980;48():345-9.
1979: R N Buick; T H Stanisic; S E Fry; S E Salmon; Jeffrey M. Trent; P Krasovich
Development of an agar-methyl cellulose clonogenic assay for cells in transitional cell carcinoma of the human bladder.
Cancer research 1979;39(12):5051-6.
1979: Jeffrey M. Trent; John Davis
D-group chromosome abnormalities in endometrial cancer and hyperplasia.
Lancet 1979;2(8138):361.
1978: Anne W Hamburger; S E Salmon; M B Kim; Jeffrey M. Trent; B J Soehnlen; D S Alberts; H J Schmidt
Direct cloning of human ovarian carcinoma cells in agar.
Cancer research 1978;38(10):3438-44.