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ottavia spiga

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Silvia Bottini; Matteo De Chiara; Marco Dioguardi; Diego Garlaschelli; ottavia spiga; Anna Tramontano; Elisa Vannuccini; Andrea Bernini; Neri Niccolai
ProCoCoA: A quantitative approach for analyzing protein core composition.
Danilo Gullotto; Mario Salvatore Nolassi; ottavia spiga; Andrea Bernini; Neri Niccolai
Probing the protein space for extending the detection of weak homology folds.
Elisa Grillo; Joseph Hayek; Silvia Leoncini; Caterina Lo Rizzo; Francesca Mari; Ilaria Meloni; Maria Antonietta Mencarelli; Alessandra Pecorelli; Francesca Ariani; Margherita Baldassarri; L Bianciardi; Veronica Bizzarri; Lucia Ciccoli; Claudio De Felice; Simone Furini; Cinzia Signorini; ottavia spiga; Alessandra Renieri
Revealing the complexity of a monogenic disease: rett syndrome exome sequencing.

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All Publications

2013: Silvia Bottini; Matteo De Chiara; Marco Dioguardi; Diego Garlaschelli; ottavia spiga; Anna Tramontano; Elisa Vannuccini; Andrea Bernini; Neri Niccolai
ProCoCoA: A quantitative approach for analyzing protein core composition.
Computational biology and chemistry 2013;43():29-34.
2013: Danilo Gullotto; Mario Salvatore Nolassi; ottavia spiga; Andrea Bernini; Neri Niccolai
Probing the protein space for extending the detection of weak homology folds.
Journal of theoretical biology 2013;320():152-8.
2013: Elisa Grillo; Joseph Hayek; Silvia Leoncini; Caterina Lo Rizzo; Francesca Mari; Ilaria Meloni; Maria Antonietta Mencarelli; Alessandra Pecorelli; Francesca Ariani; Margherita Baldassarri; L Bianciardi; Veronica Bizzarri; Lucia Ciccoli; Claudio De Felice; Simone Furini; Cinzia Signorini; ottavia spiga; Alessandra Renieri
Revealing the complexity of a monogenic disease: rett syndrome exome sequencing.
PloS one 2013;8(2):e56599.
2012: Andrea Bernini; Mauro Botta; Gianluca Croce; Filippo Prischi; ottavia spiga; Angela Pui-Ling Tong; Vincenzo Venditti; Wing Tak Wong; Neri Niccolai
The use of a ditopic Gd(III) paramagnetic probe for investigating α-bungarotoxin surface accessibility.
Journal of inorganic biochemistry 2012;112():25-31.
2011: ottavia spiga; Domenico Summa; Simone Cirri; Andrea Bernini; Vincenzo Venditti; Matteo De Chiara; Raffaella Priora; Simona Frosali; Antonios Margaritis; Danila Di Giuseppe; Paolo Di Simplicio; Neri Niccolai
A structurally driven analysis of thiol reactivity in mammalian albumins.
Biopolymers 2011;95(4):278-85.
2011: Andrea Bernini; Simone Cirri; Roberto Consonni; Paola Fusi; Annamaria Guagliardi; Ivana Arosio; ottavia spiga; Neri Niccolai
Hydration studies on the archaeal protein Sso7d using NMR measurements and MD simulations.
BMC structural biology 2011;11():44.
2011: Zai Wang; Jian-Dong Huang; Kin-Ling Wong; Pei-Gang Wang; Hao-Jie Zhang; Julian Tanner; ottavia spiga; Andrea Bernini; Bo-Jian Zheng; Neri Niccolai
On the mechanisms of bananin activity against severe acute respiratory syndrome coronavirus.
The FEBS journal 2011;278(2):383-9.
2009: Daniela Vannoni; Roberto Leoncini; Stefania Giglioni; Neri Niccolai; ottavia spiga; Emilia Aceto; Enrico Marinello
Evidence of a new phosphoryl transfer system in nucleotide metabolism.
The FEBS journal 2009;276(1):271-85.
2008: Andrea Bernini; Vincenzo Venditti; ottavia spiga; Arianna Ciutti; Filippo Prischi; Roberto Consonni; Lucia Zetta; Ivana Arosio; Paola Fusi; Annamaria Guagliardi; Neri Niccolai
NMR studies on the surface accessibility of the archaeal protein Sso7d by using TEMPOL and Gd(III)(DTPA-BMA) as paramagnetic probes.
Biophysical chemistry 2008;137(2-3):71-5.
2008: Francesca Ariani; Giuseppe Hayek; Dalila Rondinella; Rosangela Artuso; Maria Antonietta Mencarelli; Ariele Spanhol-Rosseto; Marzia Pollazzon; Sabrina Buoni; ottavia spiga; Sara Ricciardi; Ilaria Meloni; Ilaria Longo; Francesca Mari; Vania Broccoli; Michele Zappella; Alessandra Renieri
FOXG1 is responsible for the congenital variant of Rett syndrome.
American journal of human genetics 2008;83(1):89-93.
2007: Domenico Summa; ottavia spiga; Andrea Bernini; Vincenzo Venditti; Raffaella Priora; Simona Frosali; Antonios Margaritis; Danila Di Giuseppe; Neri Niccolai; Paolo Di Simplicio
Protein-thiol substitution or protein dethiolation by thiol/disulfide exchange reactions: the albumin model.
Proteins 2007;69(2):369-78.
2007: Vincenzo Venditti; Andrea Bernini; Alfonso De Simone; ottavia spiga; Filippo Prischi; Neri Niccolai
MD and NMR studies of alpha-bungarotoxin surface accessibility.
Biochemical and biophysical research communications 2007;356(1):114-7.
2006: Andrea Bernini; ottavia spiga; Vincenzo Venditti; Filippo Prischi; Luisa Bracci; Angela Pui-Ling Tong; Wing-Tak Wong; Neri Niccolai
NMR studies of lysozyme surface accessibility by using different paramagnetic relaxation probes.
Journal of the American Chemical Society 2006;128(29):9290-1.
2006: Andrea Bernini; ottavia spiga; Vincenzo Venditti; Filippo Prischi; Luisa Bracci; Jiandong Huang; Julian Tanner; Neri Niccolai
Tertiary structure prediction of SARS coronavirus helicase.
Biochemical and biophysical research communications 2006;343(4):1101-4.
2006: Andrea Bernini; ottavia spiga; Arianna Ciutti; Vincenzo Venditti; Filippo Prischi; Mariangela Governatori; Luisa Bracci; Barbara Lelli; Silvia Pileri; Mauro Botta; Alessandro Barge; Franco Laschi; Neri Niccolai
NMR studies of BPTI aggregation by using paramagnetic relaxation reagents.
Biochimica et biophysica acta 2006;1764(5):856-62.
2006: ottavia spiga; Maria Giuseppina Padula; Maria Scarselli; Arianna Ciutti; Andrea Bernini; Vincenzo Venditti; Filippo Prischi; Chiara Falciani; Luisa Lozzi; Luisa Bracci; Pier Egisto Valensin; Cinzia Caudai; Neri Niccolai
Structurally driven selection of human hepatitis C virus mimotopes.
Antiviral therapy 2006;11(7):917-22.
2005: Daniele Varrazzo; Andrea Bernini; ottavia spiga; Arianna Ciutti; Stefano Chiellini; Vincenzo Venditti; Luisa Bracci; Neri Niccolai
Three-dimensional computation of atom depth in complex molecular structures.
Bioinformatics (Oxford, England) 2005;21(12):2856-60.
2005: Huai-Dong Song; Chang-Chun Tu; Guo-Wei Zhang; Sheng-Yue Wang; Kui Zheng; Lian-Cheng Lei; Qiu-Xia Chen; Yu-Wei Gao; Hui-Qiong Zhou; Hua Xiang; Hua-Jun Zheng; Shur-Wern Wang Chern; Feng Cheng; Chun-Ming Pan; Hua Xuan; Sai-Juan Chen; Hui-Ming Luo; Duan-Hua Zhou; Yu-Fei Liu; Jian-Feng He; Peng-Zhe Qin; Ling-Hui Li; Yu-Qi Ren; Wen-Jia Liang; Ye-Dong Yu; Larry Anderson; Ming Wang; Rui-Heng Xu; Xin-Wei Wu; Huan-Ying Zheng; Jin-Ding Chen; Guodong Liang; Yang Gao; Ming Liao; Ling Fang; Li-Yun Jiang; Hui Li; Fang Chen; Biao Di; Li-Juan He; Jin-Yan Lin; Suxiang Tong; Xiangang Kong; Lin Du; Pei Hao; Hua Tang; Andrea Bernini; Xiao-Jing Yu; ottavia spiga; Zong-Ming Guo; Hai-Yan Pan; Wei-Zhong He; Jean-Claude Manuguerra; Arnaud Fontanet; Antoine Danchin; Neri Niccolai; Yi-Xue Li; Chung-I Wu; Guo-Ping Zhao
Cross-host evolution of severe acute respiratory syndrome coronavirus in palm civet and human.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(7):2430-5.
2005: Bo-Jian Zheng; Yi Guan; Ming-Liang Hez; Hongzhe Sun; Lanying Du; Ying Zheng; Kin-Ling Wong; Honglin Chen; Ying Chen; Linyu Lu; Julian Tanner; Rory Munro Watt; Neri Niccolai; Andrea Bernini; ottavia spiga; Patrick C Y Woo; Hsiang-Fu Kung; Kwok-Yung Yuen; Jian-Dong Huang
Synthetic peptides outside the spike protein heptad repeat regions as potent inhibitors of SARS-associated coronavirus.
Antiviral therapy 2005;10(3):393-403.
2004: Andrea Bernini; ottavia spiga; Arianna Ciutti; Stefano Chiellini; Luisa Bracci; Xiyun Yan; Bojian Zheng; Jiandong Huang; Ming-Liang He; Huai-Dong Song; Pei Hao; Guoping Zhao; Neri Niccolai
Prediction of quaternary assembly of SARS coronavirus peplomer.
Biochemical and biophysical research communications 2004;325(4):1210-4.
2004: Andrea Bernini; ottavia spiga; Arianna Ciutti; Stefano Chiellini; N Menciassi; Vincenzo Venditti; Neri Niccolai
On the dynamics of water molecules at the protein solute interfaces.
Homeopathy : the journal of the Faculty of Homeopathy 2004;93(4):199-202.
2004: Andrea Bernini; ottavia spiga; Arianna Ciutti; Maria Scarselli; Giuseppe Bottoni; Paolo Mascagni; Neri Niccolai
NMR studies of the inclusion complex between beta-cyclodextrin and paroxetine.
European journal of pharmaceutical sciences : official journal of the European Federation for Pharmaceutical Sciences 2004;22(5):445-50.
2004: Andrea Bernini; Arianna Ciutti; ottavia spiga; Maria Scarselli; Samuel Klein; Stefano Vannetti; Luisa Bracci; Luisa Lozzi; Barbara Lelli; Chiara Falciani; Paolo Neri; Neri Niccolai
NMR and MD studies on the interaction between ligand peptides and alpha-bungarotoxin.
Journal of molecular biology 2004;339(5):1169-77.
2003: ottavia spiga; Andrea Bernini; Arianna Ciutti; Stefano Chiellini; Nicola Menciassi; Francesca Finetti; Vincenza Causarono; Francesca Anselmi; Filippo Prischi; Neri Niccolai
Molecular modelling of S1 and S2 subunits of SARS coronavirus spike glycoprotein.
Biochemical and biophysical research communications 2003;310(1):78-83.
2003: Neri Niccolai; ottavia spiga; Andrea Bernini; Maria Scarselli; Arianna Ciutti; Irene Fiaschi; Stefano Chiellini; Henriette Molinari; Piero A Temussi
NMR studies of protein hydration and TEMPOL accessibility.
Journal of molecular biology 2003;332(2):437-47.
2003: Gianluca Fossati; Gaetano Izzo; Emanuele Rizzi; Emanuela Gancia; Daniela Modena; Maria Luisa Moras; Neri Niccolai; Elena Giannozzi; ottavia spiga; Letizia Bono; Piero Marone; Eugenio Leone; Francesca Mangili; Stephen Harding; Neil Errington; Christopher Walters; Brian Henderson; Michael M Roberts; Anthony R M Coates; Bruno Casetta; Paolo Mascagni
Mycobacterium tuberculosis chaperonin 10 is secreted in the macrophage phagosome: is secretion due to dissociation and adoption of a partially helical structure at the membrane?
Journal of bacteriology 2003;185(14):4256-67.
2003: Maria Scarselli; Maria Giuseppina Padula; Andrea Bernini; ottavia spiga; Arianna Ciutti; Roberto Leoncini; Daniela Vannoni; Enrico Marinello; Neri Niccolai
Structure and function correlations between the rat liver threonine deaminase and aminotransferases.
Biochimica et biophysica acta 2003;1645(1):40-8.
2002: ottavia spiga; Andrea Bernini; Maria Scarselli; Arianna Ciutti; Leonardo Giovannoni; Franco Laschi; Luisa Bracci; Neri Niccolai
NMR studies on Ni(II) induced cyclization of a histidine-tagged peptide.
Journal of peptide science : an official publication of the European Peptide Society 2002;8(11):634-41.
2002: ottavia spiga; Maria Scarselli; Andrea Bernini; Arianna Ciutti; Leonardo Giovannoni; Franco Laschi; Luisa Bracci; Neri Niccolai
Metal ion complexation and folding of linear peptides.
Biophysical chemistry 2002;97(1):79-86.
2002: Maria Scarselli; ottavia spiga; Arianna Ciutti; Andrea Bernini; Luisa Bracci; Barbara Lelli; Luisa Lozzi; Duccio Calamandrei; Daniela Di Maro; Samuel Klein; Neri Niccolai
NMR structure of alpha-bungarotoxin free and bound to a mimotope of the nicotinic acetylcholine receptor.
Biochemistry 2002;41(5):1457-63.
2002: ottavia spiga; Andrea Bernini; Maria Scarselli; Arianna Ciutti; Luisa Bracci; Luisa Lozzi; Barbara Lelli; Daniela Di Maro; Duccio Calamandrei; Neri Niccolai
Peptide-protein interactions studied by surface plasmon and nuclear magnetic resonances.
FEBS letters 2002;511(1-3):33-5.
2001: Neri Niccolai; Arianna Ciutti; ottavia spiga; Maria Scarselli; Andrea Bernini; Luisa Bracci; Daniela Di Maro; C Dalvit; Henriette Molinari; G Esposito; Piero A Temussi
NMR studies of protein surface accessibility.
The Journal of biological chemistry 2001;276(45):42455-61.
2001: Neri Niccolai; Roberta Spadaccini; Maria Scarselli; Andrea Bernini; Orlando Crescenzi; ottavia spiga; Arianna Ciutti; Daniela Di Maro; Luisa Bracci; C Dalvit; Piero A Temussi
Probing the surface of a sweet protein: NMR study of MNEI with a paramagnetic probe.
Protein science : a publication of the Protein Society 2001;10(8):1498-507.