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thanyada rungrotmongkol

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Chompoonut Rungnim; thanyada rungrotmongkol; Supot Hannongbua; Hisashi Okumura
Replica exchange molecular dynamics simulation of chitosan for drug delivery system based on carbon nanotube.
Arthitaya Meeprasert; Nadtanet Nunthaboot; thanyada rungrotmongkol; Kittiwat Kamlungsua; Wasinee Khuntawee; Supot Hannongbua
Binding pattern of the long acting neuraminidase inhibitor laninamivir towards influenza A subtypes H5N1 and pandemic H1N1.
Jarinrat Kongkamnerd; Stanislav Miertus; Adelaide Milani; Paolo Pengo; Adolfo Prandi; Pornchai Rojsitthisak; thanyada rungrotmongkol; Pierfausto Seneci; Calogero Terregino; Luca Beneduce; Luca Cappelletti; Ilaria Capua; Giovanni Cattoli; Giorgio Fassina; Vladimir Frecer; Andrea Gallotta; Nutthapon Jongaroonngamsang; Wanchai De-Eknamkul
Synthesis and in vitro study of novel neuraminidase inhibitors against avian influenza virus.

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All Publications

2013: Chompoonut Rungnim; thanyada rungrotmongkol; Supot Hannongbua; Hisashi Okumura
Replica exchange molecular dynamics simulation of chitosan for drug delivery system based on carbon nanotube.
Journal of molecular graphics & modelling 2013;39():183-92.
2012: Arthitaya Meeprasert; Nadtanet Nunthaboot; thanyada rungrotmongkol; Kittiwat Kamlungsua; Wasinee Khuntawee; Supot Hannongbua
Binding pattern of the long acting neuraminidase inhibitor laninamivir towards influenza A subtypes H5N1 and pandemic H1N1.
Journal of molecular graphics & modelling 2012;38():148-54.
2012: Jarinrat Kongkamnerd; Stanislav Miertus; Adelaide Milani; Paolo Pengo; Adolfo Prandi; Pornchai Rojsitthisak; thanyada rungrotmongkol; Pierfausto Seneci; Calogero Terregino; Luca Beneduce; Luca Cappelletti; Ilaria Capua; Giovanni Cattoli; Giorgio Fassina; Vladimir Frecer; Andrea Gallotta; Nutthapon Jongaroonngamsang; Wanchai De-Eknamkul
Synthesis and in vitro study of novel neuraminidase inhibitors against avian influenza virus.
Bioorganic & medicinal chemistry 2012;20(6):2152-7.
2012: Wasinee Khuntawee; thanyada rungrotmongkol; Supot Hannongbua
Molecular dynamic behavior and binding affinity of flavonoid analogues to the cyclin dependent kinase 6/cyclin D complex.
Journal of chemical information and modeling 2012;52(1):76-83.
2011: Pathumwadee Intharathep; thanyada rungrotmongkol; Panita Decha; Nadtanet Nunthaboot; Nopphorn Kaiyawet; Teerakiat Kerdcharoen; Pornthep Sompornpisut; Supot Hannongbua
Evaluating how rimantadines control the proton gating of the influenza A M2-proton port via allosteric binding outside of the M2-channel: MD simulations.
Journal of enzyme inhibition and medicinal chemistry 2011;26(2):162-8.
2011: Uthumporn Arsawang; Oraphan Saengsawang; thanyada rungrotmongkol; Purinchaya Sornmee; Kitiyaporn Wittayanarakul; Tawun Remsungnen; Supot Hannongbua
How do carbon nanotubes serve as carriers for gemcitabine transport in a drug delivery system?
Journal of molecular graphics & modelling 2011;29(5):591-6.
2011: thanyada rungrotmongkol; Pathumwadee Yotmanee; Nadtanet Nunthaboot; Supot Hannongbua
Computational studies of influenza A virus at three important targets: hemagglutinin, neuraminidase and M2 protein.
Current pharmaceutical design 2011;17(17):1720-39.
2010: thanyada rungrotmongkol; Nadtanet Nunthaboot; Maturos Malaisree; Nopporn Kaiyawet; Pathumwadee Yotmanee; Arthitaya Meeprasert; Supot Hannongbua
Molecular insight into the specific binding of ADP-ribose to the nsP3 macro domains of chikungunya and Venezuelan equine encephalitis viruses: molecular dynamics simulations and free energy calculations.
Journal of molecular graphics & modelling 2010;29(3):347-53.
2010: Nadtanet Nunthaboot; thanyada rungrotmongkol; Maturos Malaisree; Nopporn Kaiyawet; Panita Decha; Pornthep Sompornpisut; yong poovorawan; Supot Hannongbua
Evolution of human receptor binding affinity of H1N1 hemagglutinins from 1918 to 2009 pandemic influenza A virus.
Journal of chemical information and modeling 2010;50(8):1410-7.
2010: Saree Phongphanphanee; thanyada rungrotmongkol; Norio Yoshida; Supot Hannongbua; Fumio Hirata
Proton transport through the influenza A M2 channel: three-dimensional reference interaction site model study.
Journal of the American Chemical Society 2010;132(28):9782-8.
2010: thanyada rungrotmongkol; Maturos Malaisree; Nadtanet Nunthaboot; Pornthep Sompornpisut; Supot Hannongbua
Molecular prediction of oseltamivir efficiency against probable influenza A (H1N1-2009) mutants: molecular modeling approach.
Amino acids 2010;39(2):393-8.
2010: thanyada rungrotmongkol; Thanyarat Udommaneethanakit; Vladimir Frecer; Stanislav Miertus
Combinatorial design of avian influenza neuraminidase inhibitors containing pyrrolidine core with a reduced susceptibility to viral drug resistance.
Combinatorial chemistry & high throughput screening 2010;13(3):268-77.
2009: thanyada rungrotmongkol; Thanyarat Udommaneethanakit; Maturos Malaisree; Nadtanet Nunthaboot; Pathumwadee Intharathep; Pornthep Sompornpisut; Supot Hannongbua
How does each substituent functional group of oseltamivir lose its activity against virulent H5N1 influenza mutants?
Biophysical chemistry 2009;145(1):29-36.
2009: Thanyarat Udommaneethanakit; thanyada rungrotmongkol; Urban Bren; Vladimir Frecer; Miertus Stanislav
Dynamic behavior of avian influenza A virus neuraminidase subtype H5N1 in complex with oseltamivir, zanamivir, peramivir, and their phosphonate analogues.
Journal of chemical information and modeling 2009;49(10):2323-32.
2009: Maturos Malaisree; thanyada rungrotmongkol; Nadtanet Nunthaboot; Ornjira Aruksakunwong; Pathumwadee Intharathep; Panita Decha; Pornthep Sompornpisut; Supot Hannongbua
Source of oseltamivir resistance in avian influenza H5N1 virus with the H274Y mutation.
Amino acids 2009;37(4):725-32.
2009: thanyada rungrotmongkol; Pathumwadee Intharathep; Maturos Malaisree; Nadtanet Nunthaboot; Nopphorn Kaiyawet; Pornthep Sompornpisut; Sunchai Payungporn; yong poovorawan; Supot Hannongbua
Susceptibility of antiviral drugs against 2009 influenza A (H1N1) virus.
Biochemical and biophysical research communications 2009;385(3):390-4.
2009: thanyada rungrotmongkol; Panita Decha; Pornthep Sompornpisut; Maturos Malaisree; Pathumwadee Intharathep; Nadtanet Nunthaboot; Thanyarat Udommaneethanakit; Ornjira Aruksakunwong; Supot Hannongbua
Combined QM/MM mechanistic study of the acylation process in furin complexed with the H5N1 avian influenza virus hemagglutinin's cleavage site.
Proteins 2009;76(1):62-71.
2009: thanyada rungrotmongkol; Vladimir Frecer; Wanchai De-Eknamkul; Supot Hannongbua; Stanislav Miertus
Design of oseltamivir analogs inhibiting neuraminidase of avian influenza virus H5N1.
Antiviral research 2009;82(1):51-8.
2009: Chittima Laohpongspaisan; thanyada rungrotmongkol; Pathumwadee Intharathep; Maturos Malaisree; Panita Decha; Ornjira Aruksakunwong; Pornthep Sompornpisut; Supot Hannongbua
Why amantadine loses its function in influenza m2 mutants: MD simulations.
Journal of chemical information and modeling 2009;49(4):847-52.
2009: thanyada rungrotmongkol; M Malaisree; T Udommaneethanakit; Supot Hannongbua
Comment on "Another look at the molecular mechanism of the resistance of H5N1 influenza A virus neuraminidase (NA) to oseltamivir (OTV)".
Biophysical chemistry 2009;141(1):131-2; author reply 133.
2008: Pathumwadee Intharathep; Chittima Laohpongspaisan; thanyada rungrotmongkol; Arthorn Loisruangsin; Maturos Malaisree; Panita Decha; Ornjira Aruksakunwong; Krit Chuenpennit; Nopphorn Kaiyawet; Pornthep Sompornpisut; Somsak Pianwanit; Supot Hannongbua
How amantadine and rimantadine inhibit proton transport in the M2 protein channel.
Journal of molecular graphics & modelling 2008;27(3):342-8.
2008: thanyada rungrotmongkol; P Decha; M Malaisree; Pornthep Sompornpisut; Supot Hannongbua
Comment on "Cleavage mechanism of the H5N1 hemagglutinin by trypsin and furin" [Amino Acids 2008, January 31, Doi: 10.1007/s00726-007-0611-3].
Amino acids 2008;35(2):511-2.
2008: Veena S Nukoolkarn; Suwipa Saen-Oon; thanyada rungrotmongkol; Supot Hannongbua; Kornkanok Ingkaninan; Khanit Suwanborirux
Petrosamine, a potent anticholinesterase pyridoacridine alkaloid from a Thai marine sponge Petrosia n. sp.
Bioorganic & medicinal chemistry 2008;16(13):6560-7.
2008: Panita Decha; thanyada rungrotmongkol; Pathumwadee Intharathep; Maturos Malaisree; Ornjira Aruksakunwong; Chittima Laohpongspaisan; Vudhichai Parasuk; Pornthep Sompornpisut; Somsak Pianwanit; Sirirat Kokpol; Supot Hannongbua
Source of high pathogenicity of an avian influenza virus H5N1: why H5 is better cleaved by furin.
Biophysical journal 2008;95(1):128-34.
2008: Maturos Malaisree; thanyada rungrotmongkol; Panita Decha; Pathumwadee Intharathep; Ornjira Aruksakunwong; Supot Hannongbua
Understanding of known drug-target interactions in the catalytic pocket of neuraminidase subtype N1.
Proteins 2008;71(4):1908-18.
2007: thanyada rungrotmongkol; Adrian J Mulholland; Supot Hannongbua
Active site dynamics and combined quantum mechanics/molecular mechanics (QM/MM) modelling of a HIV-1 reverse transcriptase/DNA/dTTP complex.
Journal of molecular graphics & modelling 2007;26(1):1-13.