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Thomas Ellis

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Cathie Martin; Thomas Ellis; Fred Rook
Do transcription factors play special roles in adaptive variation?
Jitender Cheema; Thomas Ellis; Jo Dicks
THREaD Mapper Studio: a novel, visual web server for the estimation of genetic linkage maps.
Roger Hellens; Carol Moreau; Kui Lin-Wang; Kathy E Schwinn; Susan J Thomson; Mark W E J Fiers; Tonya J Frew; Sarah R Murray; Julie M I Hofer; Jeanne M E Jacobs; Kevin M Davies; Andrew C Allan; Abdelhafid Bendahmane; Clarice J Coyne; Gail M Timmerman-Vaughan; Thomas Ellis
Identification of Mendel's white flower character.

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All Publications

2010: Cathie Martin; Thomas Ellis; Fred Rook
Do transcription factors play special roles in adaptive variation?
Plant physiology 2010;154(2):506-11.
2010: Jitender Cheema; Thomas Ellis; Jo Dicks
THREaD Mapper Studio: a novel, visual web server for the estimation of genetic linkage maps.
Nucleic acids research 2010;38(Web Server issue):W188-93.
2010: Roger Hellens; Carol Moreau; Kui Lin-Wang; Kathy E Schwinn; Susan J Thomson; Mark W E J Fiers; Tonya J Frew; Sarah R Murray; Julie M I Hofer; Jeanne M E Jacobs; Kevin M Davies; Andrew C Allan; Abdelhafid Bendahmane; Clarice J Coyne; Gail M Timmerman-Vaughan; Thomas Ellis
Identification of Mendel's white flower character.
PloS one 2010;5(10):e13230.
2009: Julie M I Hofer; Lynda Turner; Carol Moreau; Michael J Ambrose; Peter Isaac; Susan Butcher; James Weller; Adeline Dupin; Marion Dalmais; Christine Le Signor; Abdelhafid Bendahmane; Thomas Ellis
Tendril-less regulates tendril formation in pea leaves.
The Plant cell 2009;21(2):420-8.
2009: Maggie Knox; Carol Moreau; James Lipscombe; David Baker; Thomas Ellis
High-throughput retrotransposon-based fluorescent markers: improved information content and allele discrimination.
Plant methods 2009;5():10.
2007: Runchun Jing; Richard Johnson; Andrea Seres; György B Kiss; Michael J Ambrose; Maggie R Knox; Thomas Ellis; Andrew J Flavell
Gene-based sequence diversity analysis of field pea (Pisum).
Genetics 2007;177(4):2263-75.
2006: Claire Domoney; Gérard Duc; Thomas Ellis; Cristina Ferrándiz; Christian Firnhaber; Karine Gallardo; Julie M I Hofer; Joachim Kopka; Helge Küster; Franciso Madueño; Nathalie G Munier-Jolain; Klaus Mayer; Richard Thompson; Michael K Udvardi; Christophe Salon
Genetic and genomic analysis of legume flowers and seeds.
Current opinion in plant biology 2006;9(2):133-41.
2005: Jennifer M Lee; Guy F Davenport; David Marshall; Thomas Ellis; Michael J Ambrose; Jo Dicks; Th J L Van Hintum; Andrew J Flavell
GERMINATE. a generic database for integrating genotypic and phenotypic information for plant genetic resource collections.
Plant physiology 2005;139(2):619-31.
2005: Runchun Jing; Maggie R Knox; Jennifer M Lee; Alexander V Vershinin; Michael J Ambrose; Thomas Ellis; Andrew J Flavell
Insertional polymorphism and antiquity of PDR1 retrotransposon insertions in pisum species.
Genetics 2005;171(2):741-52.
2005: Valérie Hecht; Fabrice Foucher; Cristina Ferrándiz; Richard Macknight; Cristina Navarro; Julie Morin; Megan E Vardy; Thomas Ellis; José-Pío Beltrán; Catherine Rameau; James L Weller
Conservation of Arabidopsis flowering genes in model legumes.
Plant physiology 2005;137(4):1420-34.
2005: Alexander D Tattersall; Lynda Turner; Maggie R Knox; Michael J Ambrose; Thomas Ellis; Julie M I Hofer
The mutant crispa reveals multiple roles for PHANTASTICA in pea compound leaf development.
The Plant cell 2005;17(4):1046-60.
2004: Hong-Kyu Choi; Jeong-Hwan Mun; Dong-Jin Kim; Hongyan Zhu; Jong-Min Baek; Joann Mudge; Bruce Roe; Thomas Ellis; Jeff Doyle; György B Kiss; Nevin D Young; Douglas R Cook
Estimating genome conservation between crop and model legume species.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(43):15289-94.
2004: Péter Kaló; Andrea Seres; S A Taylor; Júlia Jakab; Zoltán Kevei; Attila Kereszt; Gabriella Endre; Thomas Ellis; György B Kiss
Comparative mapping between Medicago sativa and Pisum sativum.
Molecular genetics and genomics : MGG 2004;272(3):235-46.
2004: Z Gao; S Eyers; C Thomas; Thomas Ellis; Andrew Maule
Identification of markers tightly linked to sbm recessive genes for resistance to Pea seed-borne mosaic virus.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2004;109(3):488-94.
2004: Adrian Charlton; Theo Allnutt; Stephen Holmes; James Chisholm; Samantha Bean; Thomas Ellis; Philip M Mullineaux; Sarah Oehlschlager
NMR profiling of transgenic peas.
Plant biotechnology journal 2004;2(1):27-35.
2004: Alan Schulman; Andrew J Flavell; Thomas Ellis
The application of LTR retrotransposons as molecular markers in plants.
Methods in molecular biology (Clifton, N.J.) 2004;260():145-73.
2003: Alexander V Vershinin; Theodore R Allnutt; Maggie R Knox; Michael J Ambrose; Thomas Ellis
Transposable elements reveal the impact of introgression, rather than transposition, in Pisum diversity, evolution, and domestication.
Molecular biology and evolution 2003;20(12):2067-75.
2003: Fabrice Foucher; Julie Morin; Juliette Courtiade; Sandrine Cadioux; Thomas Ellis; Mark J Banfield; Catherine Rameau
DETERMINATE and LATE FLOWERING are two TERMINAL FLOWER1/CENTRORADIALIS homologs that control two distinct phases of flowering initiation and development in pea.
The Plant cell 2003;15(11):2742-54.
2003: Andrew J Flavell; Viacheslav N Bolshakov; Allan Booth; Runchun Jing; Joanne Russell; Thomas Ellis; Peter Isaac
A microarray-based high throughput molecular marker genotyping method: the tagged microarray marker (TAM) approach.
Nucleic acids research 2003;31(19):e115.
2003: Nevin D Young; Joann Mudge; Thomas Ellis
Legume genomes: more than peas in a pod.
Current opinion in plant biology 2003;6(2):199-204.
2003: Alexey Y Borisov; Lene H Madsen; Viktor E Tsyganov; Yosuke Umehara; Vera A Voroshilova; Arsen O Batagov; Niels Sandal; Anita Mortensen; Leif Schauser; Thomas Ellis; Igor A Tikhonovich; Jens Stougaard
The Sym35 gene required for root nodule development in pea is an ortholog of Nin from Lotus japonicus.
Plant physiology 2003;131(3):1009-17.
2002: Maggie R Knox; Thomas Ellis
Excess heterozygosity contributes to genetic map expansion in pea recombinant inbred populations.
Genetics 2002;162(2):861-73.
2002: Scott A Taylor; Julie M I Hofer; Ian C Murfet; John D Sollinger; Susan R Singer; Maggie R Knox; Thomas Ellis
PROLIFERATING INFLORESCENCE MERISTEM, a MADS-box gene that regulates floral meristem identity in pea.
Plant physiology 2002;129(3):1150-9.
2002: Claire Domoney; Tracey Welham; Thomas Ellis; Philippe Mozzanega; Lynda Turner
Three classes of proteinase inhibitor gene have distinct but overlapping patterns of expression in Pisum sativum plants.
Plant molecular biology 2002;48(3):319-29.
2002: Julie M I Hofer; Thomas Ellis
Conservation and diversification of gene function in plant development.
Current opinion in plant biology 2002;5(1):56-61.
2001: Maggie R Knox; Thomas Ellis
Stability and inheritance of methylation states at PstI sites in Pisum.
Molecular genetics and genomics : MGG 2001;265(3):497-507.
2001: Julie M I Hofer; C Gourlay; A Michael; Thomas Ellis
Expression of a class 1 knotted1-like homeobox gene is down-regulated in pea compound leaf primordia.
Plant molecular biology 2001;45(4):387-98.
2000: Campbell Gourlay; Julie M I Hofer; Thomas Ellis
Pea compound leaf architecture is regulated by interactions among the genes UNIFOLIATA, cochleata, afila, and tendril-lessn.
The Plant cell 2000;12(8):1279-94.
2000: Stephen R Pearce; Maggie R Knox; Thomas Ellis; Andrew J Flavell; Amar Kumar
Pea Ty1-copia group retrotransposons: transpositional activity and use as markers to study genetic diversity in Pisum.
Molecular & general genetics : MGG 2000;263(6):898-907.
2000: JL Vincent; Maggie R Knox; Thomas Ellis; Péter Kaló; György B Kiss; Nicholas J Brewin
Nodule-expressed Cyp15a cysteine protease genes map to syntenic genome regions in Pisum and Medicago spp.
Molecular plant-microbe interactions : MPMI 2000;13(7):715-23.
1999: Alexander V Vershinin; Thomas Ellis
Heterogeneity of the internal structure of PDR1, a family of Ty1/copia-like retrotransposons in pea.
Molecular & general genetics : MGG 1999;262(4-5):703-13.
1999: Stephen R Pearce; C Stuart-Rogers; Maggie R Knox; Amar Kumar; Thomas Ellis; Andrew J Flavell
Rapid isolation of plant Ty1-copia group retrotransposon LTR sequences for molecular marker studies.
The Plant journal : for cell and molecular biology 1999;19(6):711-7.
1999: A Schneider; SA Walker; S Poyser; M Sagan; Thomas Ellis; J Allan Downie
Genetic mapping and functional analysis of a nodulation-defective mutant (sym19) of pea (Pisum sativum L.).
Molecular & general genetics : MGG 1999;262(1):1-11.
1998: Andrew J Flavell; Maggie R Knox; Stephen R Pearce; Thomas Ellis
Retrotransposon-based insertion polymorphisms (RBIP) for high throughput marker analysis.
The Plant journal : for cell and molecular biology 1998;16(5):643-50.
1998: Thomas Ellis; S J Poyser; Maggie R Knox; Alexander V Vershinin; Michael J Ambrose
Polymorphism of insertion sites of Ty1-copia class retrotransposons and its use for linkage and diversity analysis in pea.
Molecular & general genetics : MGG 1998;260(1):9-19.
1997: K J Hall; J S Parker; Thomas Ellis; L Turner; M R Knox; J M Hofer; J Lu; C Ferrandiz; P J Hunter; J D Taylor; K Baird
The relationship between genetic and cytogenetic maps of pea. II. Physical maps of linkage mapping populations.
Genome / National Research Council Canada = Génome / Conseil national de recherches Canada 1997;40(5):755-69.
1997: K J Hall; J S Parker; Thomas Ellis
The relationship between genetic and cytogenetic maps of pea. I. Standard and translocation karyotypes.
Genome / National Research Council Canada = Génome / Conseil national de recherches Canada 1997;40(5):744-54.
1997: Julie M I Hofer; Lynda Turner; Roger Hellens; Michael J Ambrose; P Matthews; A Michael; Thomas Ellis
UNIFOLIATA regulates leaf and flower morphogenesis in pea.
Current biology : CB 1997;7(8):581-7.
1996: A Kozik; M Matvienko; B Scheres; V G Paruvangada; Ton Bisseling; Ab van Kammen; Thomas Ellis; T LaRue; N Weeden
The pea early nodulin gene PsENOD7 maps in the region of linkage group I containing sym2 and leghaemoglobin.
Plant molecular biology 1996;31(1):149-56.
1994: Thomas Ellis
Estimating map distances.
Trends in genetics : TIG 1994;10(4):113-4; author reply 114-5.
1993: L Turner; Roger Hellens; D Lee; Thomas Ellis
Genetic aspects of the organization of legumin genes in pea.
Plant molecular biology 1993;22(1):101-12.
1993: Roger Hellens; Thomas Ellis; D Lee; L Turner
Repeated sequences as genetic markers in pooled tissue samples.
Plant molecular biology 1993;22(1):153-7.
1992: Thomas Ellis; L Turner; Roger Hellens; D Lee; C L Harker; C Enard; C Domoney; D R Davies
Linkage maps in pea.
Genetics 1992;130(3):649-63.
1991: S Collin; Thomas Ellis
Evidence for the presence of hairpin chloroplast DNA molecules in barley cultivars.
Current genetics 1991;20(3):253-8.
1990: D L Lee; Thomas Ellis; L Turner; Roger Hellens; W G Cleary
A copia-like element in Pisum demonstrates the uses of dispersed repeated sequences in genetic analysis.
Plant molecular biology 1990;15(5):707-22.
1990: C L Harker; Thomas Ellis; E S Coen
Identification and genetic regulation of the chalcone synthase multigene family in pea.
The Plant cell 1990;2(3):185-94.
1990: M K Bhattacharyya; A M Smith; Thomas Ellis; C Hedley; C Martin
The wrinkled-seed character of pea described by Mendel is caused by a transposon-like insertion in a gene encoding starch-branching enzyme.
Cell 1990;60(1):115-22.
1990: Thomas Ellis; M Delseny; D Lee; K W Burcham
Methylated and undermethylated rDNA repeats are interspersed at random in two higher plant species.
Plant molecular biology 1990;14(1):73-80.
1988: Thomas Ellis; D Lee; C M Thomas; P R Simpson; W G Cleary; M A Newman; K W Burcham
5S rRNA genes in Pisum: sequence, long range and chromosomal organization.
Molecular & general genetics : MGG 1988;214(2):333-42.
1988: John A Gatehouse; David P Bown; J Gilroy; M Levasseur; J Castleton; Thomas Ellis
Two genes encoding 'minor' legumin polypeptides in pea (Pisum sativum L.). Characterization and complete sequence of the LegJ gene.
The Biochemical journal 1988;250(1):15-24.
1987: Thomas Ellis; W G Cleary; K W Burcham; B A Bowen
Ramped field inversion gel electrophoresis: a cautionary note.
Nucleic acids research 1987;15(13):5489.
1986: Thomas Ellis; A Day
A hairpin plastid genome in barley.
The EMBO journal 1986;5(11):2769-74.
1984: A Day; Thomas Ellis
Chloroplast DNA deletions associated with wheat plants regenerated from pollen: possible basis for maternal inheritance of chloroplasts.
Cell 1984;39(2 Pt 1):359-68.
1983: Thomas Ellis; P B Goldsbrough; J A Castleton
Transcription and methylation of flax rDNA.
Nucleic acids research 1983;11(10):3047-64.
1982: P B Goldsbrough; Thomas Ellis; G P Lomonossoff
Sequence variation and methylation of the flax 5S RNA genes.
Nucleic acids research 1982;10(15):4501-14.
1981: P B Goldsbrough; Thomas Ellis; C A Cullis
Organisation of the 5S RNA genes in flax.
Nucleic acids research 1981;9(22):5895-904.