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Benjamin Thomas

Research Profile

Chemicals & Drugs

Occupations

Proteomics

Anatomy

Physiology

Procedures

Phenomena

Protein Binding

Living Beings

Influenza A virus

Concepts & Ideas

Disorders

Uveal Neoplasms

Co-author Network

Publications

TOP 3
Andrew J M Howden; Kristin Katsch; Benedikt M Kessler; Benjamin Thomas; David C Trudgian; Bhaskar Bhushan; Omar Boutureira; Benjamin G Davis; Daniela C Dieterich; Georgios Efstathiou; Vincent Geoghegan; Oreste Acuto
QuaNCAT: quantitating proteome dynamics in primary cells.
Fernando O Martinez; Barbro N Melgert; Ronny Milde; Nick H Ten Hacken; Benjamin Thomas; Audrey Varin; Viviana Cobos Jiménez; Anjali Crawshaw; Christina Draijer; Marco Fabbri; David R Greaves; Jörg Hamann; Laura Helming; Ling-Pei Ho; Neeltje A Kootstra; Massimo Locati; Alberto Mantovani; Siamon Gordon
Genetic programs expressed in resting and IL-4 alternatively activated mouse and human macrophages: similarities and differences.
Edward C Hutchinson; Gabriela Ridlova; Benjamin Thomas; David C Trudgian; Lauren Turrell; Ashley York; Eleanor M Denham; Svenja S Hester; Ervin Fodor
Mapping the phosphoproteome of influenza A and B viruses by mass spectrometry.

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All Publications

2013: Andrew J M Howden; Kristin Katsch; Benedikt M Kessler; Benjamin Thomas; David C Trudgian; Bhaskar Bhushan; Omar Boutureira; Benjamin G Davis; Daniela C Dieterich; Georgios Efstathiou; Vincent Geoghegan; Oreste Acuto
QuaNCAT: quantitating proteome dynamics in primary cells.
Nature methods 2013;10(4):343-6.
2013: Fernando O Martinez; Barbro N Melgert; Ronny Milde; Nick H Ten Hacken; Benjamin Thomas; Audrey Varin; Viviana Cobos Jiménez; Anjali Crawshaw; Christina Draijer; Marco Fabbri; David R Greaves; Jörg Hamann; Laura Helming; Ling-Pei Ho; Neeltje A Kootstra; Massimo Locati; Alberto Mantovani; Siamon Gordon
Genetic programs expressed in resting and IL-4 alternatively activated mouse and human macrophages: similarities and differences.
Blood 2013;121(9):e57-69.
2012: Edward C Hutchinson; Gabriela Ridlova; Benjamin Thomas; David C Trudgian; Lauren Turrell; Ashley York; Eleanor M Denham; Svenja S Hester; Ervin Fodor
Mapping the phosphoproteome of influenza A and B viruses by mass spectrometry.
PLoS pathogens 2012;8(11):e1002993.
2011: Clive Metcalfe; Benjamin Thomas; Laura Ciaccia; Peter Cresswell; A Neil Barclay
Labile disulfide bonds are common at the leucocyte cell surface.
Open biology 2011;1(3):110010.
2011: Rui André Saraiva Raposo; Benjamin Thomas; David C Trudgian; Bonnie van Wilgenburg; Sally A Cowley; William James
Protein kinase C and NF-κB-dependent CD4 downregulation in macrophages induced by T cell-derived soluble factors: consequences for HIV-1 infection.
Journal of immunology (Baltimore, Md. : 1950) 2011;187(2):748-59.
2011: David C Trudgian; Oreste Acuto; Roman Fischer; Benedikt M Kessler; Mukram M Mackeen; Gabriela Ridlova; Nicola Ternette; Benjamin Thomas
Comparative evaluation of label-free SINQ normalized spectral index quantitation in the central proteomics facilities pipeline.
Proteomics 2011;11(14):2790-7.
2011: Rui André Saraiva Raposo; Benjamin Thomas; Gabriela Ridlova; William James
Proteomic-based identification of CD4-interacting proteins in human primary macrophages.
PloS one 2011;6(4):e18690.
2010: Tatiana Fislová; Benjamin Thomas; Katy M Graef; Ervin Fodor
Association of the influenza virus RNA polymerase subunit PB2 with the host chaperonin CCT.
Journal of virology 2010;84(17):8691-9.
2010: Marcela Rosas; Benjamin Thomas; Martin Stacey; Siamon Gordon; Philip R Taylor
The myeloid 7/4-antigen defines recently generated inflammatory macrophages and is synonymous with Ly-6B.
Journal of leukocyte biology 2010;88(1):169-80.
2010: David C Trudgian; Benjamin Thomas; Simon J McGowan; Benedikt M Kessler; Mogjiborahman Salek; Oreste Acuto
CPFP: a central proteomics facilities pipeline.
Bioinformatics (Oxford, England) 2010;26(8):1131-2.
2009: Claudine Neyen; Annette Plüddemann; Pietro Roversi; Benjamin Thomas; Lei Cai; Deneys R van der Westhuyzen; Robert B Sim; Siamon Gordon
Macrophage scavenger receptor A mediates adhesion to apolipoproteins A-I and E.
Biochemistry 2009;48(50):11858-71.
2009: Carmen Galán; Isabel Sola; Aitor Nogales; Benjamin Thomas; Alexandre Akoulitchev; Luis Enjuanes; Fernando Almazán
Host cell proteins interacting with the 3' end of TGEV coronavirus genome influence virus replication.
Virology 2009;391(2):304-14.
2009: Neil Portman; Sylvain Lacomble; Benjamin Thomas; Paul G McKean; Keith Gull
Combining RNA interference mutants and comparative proteomics to identify protein components and dependences in a eukaryotic flagellum.
The Journal of biological chemistry 2009;284(9):5610-9.
2007: Ana Gomes; Isabel Miranda; Raquel M Silva; Gabriela Moura; Benjamin Thomas; Alexandre Akoulitchev; Manuel A S Santos
A genetic code alteration generates a proteome of high diversity in the human pathogen Candida albicans.
Genome biology 2007;8(10):R206.
2007: Létitia Jean; Benjamin Thomas; Abdessamad Tahiri-Alaoui; Michael Shaw; David Vaux
Heterologous amyloid seeding: revisiting the role of acetylcholinesterase in Alzheimer's disease.
PloS one 2007;2(7):e652.
2006: Tao Deng; Othmar G Engelhardt; Benjamin Thomas; Alexandre Akoulitchev; George G Brownlee; Ervin Fodor
Role of ran binding protein 5 in nuclear import and assembly of the influenza virus RNA polymerase complex.
Journal of virology 2006;80(24):11911-9.
2006: María Pardo; Angel García; Benjamin Thomas; Antonio Piñeiro; Alexandre Akoulitchev; Raymond A Dwek; Nicole Zitzmann
The characterization of the invasion phenotype of uveal melanoma tumour cells shows the presence of MUC18 and HMG-1 metastasis markers and leads to the identification of DJ-1 as a potential serum biomarker.
International journal of cancer. Journal international du cancer 2006;119(5):1014-22.
2006: Benjamin Thomas; Alexandre Akoulitchev
Mass spectrometry of RNA.
Trends in biochemical sciences 2006;31(3):173-81.
2006: William O'Gorman; Kon Yew Kwek; Benjamin Thomas; Alexandre Akoulitchev
Non-coding RNA in transcription initiation.
Biochemical Society symposium 2006;(73):131-40.
2005: María Pardo; Angel García; Benjamin Thomas; Antonio Piñeiro; Alexandre Akoulitchev; Raymond A Dwek; Nicole Zitzmann
Proteome analysis of a human uveal melanoma primary cell culture by 2-DE and MS.
Proteomics 2005;5(18):4980-93.
2005: William O'Gorman; Benjamin Thomas; Kon Yew Kwek; Andre Furger; Alexandre Akoulitchev
Analysis of U1 small nuclear RNA interaction with cyclin H.
The Journal of biological chemistry 2005;280(44):36920-5.
2005: Caroline C L Jenkins; Juan Mata; Richard F Crane; Benjamin Thomas; Alexandre Akoulitchev; Jürg Bähler; Chris J Norbury
Activation of AP-1-dependent transcription by a truncated translation initiation factor.
Eukaryotic cell 2005;4(11):1840-50.
2004: Alexandre Teixeira; Abdessamad Tahiri-Alaoui; Steven West; Benjamin Thomas; Aroul Ramadass; Igor Martianov; Michael J Dye; William James; Nick J Proudfoot; Alexandre Akoulitchev
Autocatalytic RNA cleavage in the human beta-globin pre-mRNA promotes transcription termination.
Nature 2004;432(7016):526-30.
2002: Kon Yew Kwek; Shona Murphy; Andre Furger; Benjamin Thomas; William O'Gorman; Hiroshi Kimura; Nick J Proudfoot; Alexandre Akoulitchev
U1 snRNA associates with TFIIH and regulates transcriptional initiation.
Nature structural biology 2002;9(11):800-5.