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haider shozeb

Research Profile

Chemicals & Drugs

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Computer Simulation

Physiology

Ion Channel Gating

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Publications

TOP 3
Valentina D'Atri; Stefano D'Errico; haider shozeb; Bart Hoorelbeke; Luciano Mayol; Giorgia Oliviero; Jussara Amato; Jan Balzarini; Nicola Borbone; Vincenzo Piccialli; gennaro Piccialli
New anti-HIV aptamers based on tetra-end-linked DNA G-quadruplexes: effect of the base sequence on anti-HIV activity.
Jarmila Husby; David E Thurston; Alan K Todd; Giovanna Zinzalla; haider shozeb; Stephen Neidle
Molecular dynamics studies of the STAT3 homodimer:DNA complex: relationships between STAT3 mutations and protein-DNA recognition.
Miriam Sgobba; Song Ke; Olujide Olubiyi; haider shozeb
Molecular dynamics of HIV1-integrase in complex with 93del - a structural perspective on the mechanism of inhibition.

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All Publications

2012: Valentina D'Atri; Stefano D'Errico; haider shozeb; Bart Hoorelbeke; Luciano Mayol; Giorgia Oliviero; Jussara Amato; Jan Balzarini; Nicola Borbone; Vincenzo Piccialli; gennaro Piccialli
New anti-HIV aptamers based on tetra-end-linked DNA G-quadruplexes: effect of the base sequence on anti-HIV activity.
Chemical communications (Cambridge, England) 2012;48(76):9516-8.
2012: Jarmila Husby; David E Thurston; Alan K Todd; Giovanna Zinzalla; haider shozeb; Stephen Neidle
Molecular dynamics studies of the STAT3 homodimer:DNA complex: relationships between STAT3 mutations and protein-DNA recognition.
Journal of chemical information and modeling 2012;52(5):1179-92.
2012: Miriam Sgobba; Song Ke; Olujide Olubiyi; haider shozeb
Molecular dynamics of HIV1-integrase in complex with 93del - a structural perspective on the mechanism of inhibition.
Journal of biomolecular structure & dynamics 2012;29(5):863-77.
2011: haider shozeb; Ida Autiero; Stephen Neidle
Surface area accessibility and the preferred topology of telomeric DNA quadruplex-ligand complexes.
Biochimie 2011;93(8):1275-9.
2011: haider shozeb; Stephen Neidle; Gary N Parkinson
A structural analysis of G-quadruplex/ligand interactions.
Biochimie 2011;93(8):1239-51.
2011: haider shozeb; Caleb G Joseph; Stephen Neidle; Carol A Fierke; Matthew J Fuchter
On the function of the internal cavity of histone deacetylase protein 8: R37 is a crucial residue for catalysis.
Bioorganic & medicinal chemistry letters 2011;21(7):2129-32.
2010: Caterina Maria Lombardo; Iria Sánchez Martínez; haider shozeb; Valérie Gabelica; Edwin De Pauw; John E Moses; Stephen Neidle
Structure-based design of selective high-affinity telomeric quadruplex-binding ligands.
Chemical communications (Cambridge, England) 2010;46(48):9116-8.
2010: Giorgia Oliviero; Jussara Amato; Nicola Borbone; Stefano D'Errico; Aldo Galeone; Luciano Mayol; haider shozeb; Olujide Olubiyi; Bart Hoorelbeke; Jan Balzarini; gennaro Piccialli
Tetra-end-linked oligonucleotides forming DNA G-quadruplexes: a new class of aptamers showing anti-HIV activity.
Chemical communications (Cambridge, England) 2010;46(47):8971-3.
2010: Giovanna Zinzalla; Mohammad R Haque; B Piku Basu; John Anderson; Samantha L Kaye; haider shozeb; Fyeza Hasan; Dyeison Antonow; Samantha Essex; Khondaker M Rahman; Jonathan Palmer; Daniel Morgenstern; Andrew F Wilderspin; Stephen Neidle; David E Thurston
A novel small-molecule inhibitor of IL-6 signalling.
Bioorganic & medicinal chemistry letters 2010;20(23):7029-32.
2010: Silvia Sparapani; haider shozeb; Filippo Doria; Mekala Gunaratnam; Stephen Neidle
Rational design of acridine-based ligands with selectivity for human telomeric quadruplexes.
Journal of the American Chemical Society 2010;132(35):12263-72.
2010: Gavin W Collie; haider shozeb; Stephen Neidle; Gary N Parkinson
A crystallographic and modelling study of a human telomeric RNA (TERRA) quadruplex.
Nucleic acids research 2010;38(16):5569-80.
2010: Silvia Sparapani; Stefania Bellini; Mekala Gunaratnam; haider shozeb; Aldo Andreani; Mirella Rambaldi; Alessandra Locatelli; Rita Morigi; Massimiliano Granaiola; Lucilla Varoli; Silvia Burnelli; Alberto Leoni; Stephen Neidle
Bis-guanylhydrazone diimidazo[1,2-a:1,2-c]pyrimidine as a novel and specific G-quadruplex binding motif.
Chemical communications (Cambridge, England) 2010;46(31):5680-2.
2010: haider shozeb; Jagdish S Patel; Chetan S Poojari; Stephen Neidle
Molecular modeling on inhibitor complexes and active-site dynamics of cytochrome P450 C17, a target for prostate cancer therapy.
Journal of molecular biology 2010;400(5):1078-98.
2010: John E Moses; Dougal J Ritson; Fengzhi Zhang; Caterina Maria Lombardo; haider shozeb; Neil Oldham; Stephen Neidle
A click chemistry approach to C3 symmetric, G-quadruplex stabilising ligands.
Organic & biomolecular chemistry 2010;8(13):2926-30.
2010: haider shozeb; Stephen Neidle
Molecular modeling and simulation of G-quadruplexes and quadruplex-ligand complexes.
Methods in molecular biology (Clifton, N.J.) 2010;608():17-37.
2009: Gavin Collie; Anthony P Reszka; haider shozeb; Valérie Gabelica; Gary N Parkinson; Stephen Neidle
Selectivity in small molecule binding to human telomeric RNA and DNA quadruplexes.
Chemical communications (Cambridge, England) 2009;(48):7482-4.
2009: Khondaker M Rahman; Anthony P Reszka; Mekala Gunaratnam; haider shozeb; Philip W Howard; Keith R Fox; Stephen Neidle; David E Thurston
Biaryl polyamides as a new class of DNA quadruplex-binding ligands.
Chemical communications (Cambridge, England) 2009;(27):4097-9.
2009: Mekala Gunaratnam; Stephen Swank; haider shozeb; Katja Galesa; Anthony P Reszka; Monica Beltran; Francisco Cuenca; Jonathan A Fletcher; Stephen Neidle
Targeting human gastrointestinal stromal tumor cells with a quadruplex-binding small molecule.
Journal of medicinal chemistry 2009;52(12):3774-83.
2009: haider shozeb; Stephen Neidle
A molecular model for drug binding to tandem repeats of telomeric G-quadruplexes.
Biochemical Society transactions 2009;37(Pt 3):583-8.
2009: Kaihsu Tai; haider shozeb; Alessandro Grottesi; Mark S P Sansom
Ion channel gates: comparative analysis of energy barriers.
European biophysics journal : EBJ 2009;38(4):347-54.
2008: haider shozeb; Gary N Parkinson; Stephen Neidle
Molecular dynamics and principal components analysis of human telomeric quadruplex multimers.
Biophysical journal 2008;95(1):296-311.
2008: Adam D Moorhouse; haider shozeb; Mekala Gunaratnam; Deeksha Munnur; Stephen Neidle; John E Moses
Targeting telomerase and telomeres: a click chemistry approach towards highly selective G-quadruplex ligands.
Molecular bioSystems 2008;4(6):629-42.
2008: Francisco Cuenca; Olga Greciano; Mekala Gunaratnam; haider shozeb; Deeksha Munnur; Rupesh Nanjunda; David W. Wilson; Stephen Neidle
Tri- and tetra-substituted naphthalene diimides as potent G-quadruplex ligands.
Bioorganic & medicinal chemistry letters 2008;18(5):1668-73.
2007: haider shozeb; Andrei I Tarasov; Tim J Craig; Mark S P Sansom; Frances M Ashcroft
Identification of the PIP2-binding site on Kir6.2 by molecular modelling and functional analysis.
The EMBO journal 2007;26(16):3749-59.
2007: haider shozeb; Syma Khalid; Stephen J Tucker; Frances M Ashcroft; Mark S P Sansom
Molecular dynamics simulations of inwardly rectifying (Kir) potassium channels: a comparative study.
Biochemistry 2007;46(12):3643-52.
2007: Alan K Todd; haider shozeb; Gary N Parkinson; Stephen Neidle
Sequence occurrence and structural uniqueness of a G-quadruplex in the human c-kit promoter.
Nucleic acids research 2007;35(17):5799-808.
2006: haider shozeb; Benjamin Andrew Hall; Mark S P Sansom
Simulations of a protein translocation pore: SecY.
Biochemistry 2006;45(43):13018-24.
2006: Markus Rapedius; haider shozeb; Katharine F Browne; Lijun Shang; Mark S P Sansom; Thomas Baukrowitz; Stephen J Tucker
Structural and functional analysis of the putative pH sensor in the Kir1.1 (ROMK) potassium channel.
EMBO reports 2006;7(6):611-6.
2005: Mark S P Sansom; Peter Bond; Sundeep S Deol; Alessandro Grottesi; haider shozeb; Zara A Sands
Molecular simulations and lipid-protein interactions: potassium channels and other membrane proteins.
Biochemical Society transactions 2005;33(Pt 5):916-20.
2005: Lijun Shang; Christopher J Lucchese; haider shozeb; Stephen J Tucker
Functional characterisation of missense variations in the Kir4.1 potassium channel (KCNJ10) associated with seizure susceptibility.
Brain research. Molecular brain research 2005;139(1):178-83.
2005: haider shozeb; Jennifer F Antcliff; Peter Proks; Mark S P Sansom; Frances M Ashcroft
Focus on Kir6.2: a key component of the ATP-sensitive potassium channel.
Journal of molecular and cellular cardiology 2005;38(6):927-36.
2005: Peter Proks; Christophe Girard; haider shozeb; Anna L Gloyn; Andrew T Hattersley; Mark S P Sansom; Frances M Ashcroft
A gating mutation at the internal mouth of the Kir6.2 pore is associated with DEND syndrome.
EMBO reports 2005;6(5):470-5.
2005: haider shozeb; Alessandro Grottesi; Benjamin Andrew Hall; Frances M Ashcroft; Mark S P Sansom
Conformational dynamics of the ligand-binding domain of inward rectifier K channels as revealed by molecular dynamics simulations: toward an understanding of Kir channel gating.
Biophysical journal 2005;88(5):3310-20.
2005: Alessandro Grottesi; Carmen Domene; haider shozeb; Mark S P Sansom
Molecular dynamics simulation approaches to K channels: conformational flexibility and physiological function.
IEEE transactions on nanobioscience 2005;4(1):112-20.
2005: Jennifer F Antcliff; haider shozeb; Peter Proks; Mark S P Sansom; Frances M Ashcroft
Functional analysis of a structural model of the ATP-binding site of the KATP channel Kir6.2 subunit.
The EMBO journal 2005;24(2):229-39.
2004: R John Harrison; Anthony P Reszka; haider shozeb; Barbara Romagnoli; James Morrell; Martin A Read; Sharon M Gowan; Christopher M Incles; Lloyd R Kelland; Stephen Neidle
Evaluation of by disubstituted acridone derivatives as telomerase inhibitors: the importance of G-quadruplex binding.
Bioorganic & medicinal chemistry letters 2004;14(23):5845-9.
2003: Carmen Domene; haider shozeb; Mark S P Sansom
Ion channel structures: a review of recent progress.
Current opinion in drug discovery & development 2003;6(5):611-9.
2003: Stefan Trapp; haider shozeb; Phillippa Jones; Mark S P Sansom; Frances M Ashcroft
Identification of residues contributing to the ATP binding site of Kir6.2.
The EMBO journal 2003;22(12):2903-12.
2003: haider shozeb; Gary N Parkinson; Stephen Neidle
Structure of a G-quadruplex-ligand complex.
Journal of molecular biology 2003;326(1):117-25.
2002: haider shozeb; Gary N Parkinson; Stephen Neidle
Crystal structure of the potassium form of an Oxytricha nova G-quadruplex.
Journal of molecular biology 2002;320(2):189-200.