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Mark Eppinger

Research Profile

Genes & Molecular Sequences

Living Beings

Disorders

Plague

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Chemicals & Drugs

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Publications

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Mark Eppinger; Peter Feng; Claire M Fraser; Kevin Galens; Mark K Mammel; Sonia Agrawal; Thomas A Cebula; Sean Daugherty; Chitrita DebRoy; Edward G Dudley; Lisa Sadzewicz; Naomi Sengamalay; Robert Soderlund; Luke Tallon; Phillip I Tarr; Jacques Ravel
Whole-Genome Draft Sequences of 26 Enterohemorrhagic Escherichia coli O157:H7 Strains.
Nur A Hasan; Erin Hine; M M Hoq; Anwar Huq; Huai Li; Joseph B Prosper; Jacques Ravel; Qi Su; Luke J Tallon; Elisa Taviani; Munirul Alam; Thomas A Cebula; Arlene Chen; Seon Young Choi; Philip W Clark; Alejandro Cravioto; Mark Eppinger; Claire M Fraser-Liggett; Keziah Furth; Bradd J Haley; Rita R Colwell
Genomic diversity of 2010 Haitian cholera outbreak strains.
Ashlee M Earl; Mark Eppinger; W. Florian Fricke; Roberto Kolter; Richard Losick; David Rasko; Sean Daugherty; Mary J Rosovitz; Jacques Ravel
Whole-genome sequences of Bacillus subtilis and close relatives.

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All Publications

2013: Mark Eppinger; Peter Feng; Claire M Fraser; Kevin Galens; Mark K Mammel; Sonia Agrawal; Thomas A Cebula; Sean Daugherty; Chitrita DebRoy; Edward G Dudley; Lisa Sadzewicz; Naomi Sengamalay; Robert Soderlund; Luke Tallon; Phillip I Tarr; Jacques Ravel
Whole-Genome Draft Sequences of 26 Enterohemorrhagic Escherichia coli O157:H7 Strains.
Genome announcements 2013;1(2):e0013412.
2012: Nur A Hasan; Erin Hine; M M Hoq; Anwar Huq; Huai Li; Joseph B Prosper; Jacques Ravel; Qi Su; Luke J Tallon; Elisa Taviani; Munirul Alam; Thomas A Cebula; Arlene Chen; Seon Young Choi; Philip W Clark; Alejandro Cravioto; Mark Eppinger; Claire M Fraser-Liggett; Keziah Furth; Bradd J Haley; Rita R Colwell
Genomic diversity of 2010 Haitian cholera outbreak strains.
Proceedings of the National Academy of Sciences of the United States of America 2012;109(29):E2010-7.
2012: Ashlee M Earl; Mark Eppinger; W. Florian Fricke; Roberto Kolter; Richard Losick; David Rasko; Sean Daugherty; Mary J Rosovitz; Jacques Ravel
Whole-genome sequences of Bacillus subtilis and close relatives.
Journal of bacteriology 2012;194(9):2378-9.
2012: Mark Eppinger; Sherry Mou; Lyndsay Radnedge; Jacques Ravel; Grant Severson; Nicholas Vietri; Gary Andersen; Patricia L Worsham
Novel plasmids and resistance phenotypes in Yersinia pestis: unique plasmid inventory of strain Java 9 mediates high levels of arsenic resistance.
PloS one 2012;7(3):e32911.
2011: Mark Eppinger; Jacques Ravel; Mark K Mammel; Joseph E Leclerc; Thomas A Cebula
Genomic anatomy of Escherichia coli O157:H7 outbreaks.
Proceedings of the National Academy of Sciences of the United States of America 2011;108(50):20142-7.
2011: Amy J Vogler; David M Wagner; Mark Achtman; Stephen Beckstrom-Sternberg; Fabien Chan; Suzanne Chanteau; Mark Eppinger; Judy Lee; Roxanne Nera; Lila Rahalison; Bruno W Rasoamanana; Jacques Ravel; Philippe Roumagnac; Paul Keim
Phylogeography and molecular epidemiology of Yersinia pestis in Madagascar.
PLoS neglected tropical diseases 2011;5(9):e1319.
2011: Mark Eppinger; Scott Grayburn; Dieter Jahn; Mitrick A Johns; Sara S K Koenig; Kirthi K Kutumbaka; Vitaliy Lukyanchuk; Madeleine Martin; Ian Paulsen; Jacques Ravel; David R Riley; Mary J Rosovitz; Jürgen Seibel; Riaz Ul-Qamar; Barbara Ball; Rebekka Biedendieck; Christopher Braun; Erhard Bremer; Boyke Bunk; Sean Daugherty; Sourabh Dhingra; Janaka N Edirisinghe; Liam D H Elbourne; Heather Huot Creasy; Patricia S Vary
Genome sequences of the biotechnologically important Bacillus megaterium strains QM B1551 and DSM319.
Journal of bacteriology 2011;193(16):4199-213.
2011: Mark Eppinger; Mark K Mammel; Joseph E Leclerc; Jacques Ravel; Thomas A Cebula
Genome signatures of Escherichia coli O157:H7 isolates from the bovine host reservoir.
Applied and environmental microbiology 2011;77(9):2916-25.
2010: Giovanna Morelli; Yajun Song; Camila J Mazzoni; Mark Eppinger; Philippe Roumagnac; David M Wagner; Mirjam Feldkamp; Barica Kusecek; Amy J Vogler; Yanjun Li; Yujun Cui; Nicholas R Thomson; Thibaut Jombart; Raphael Leblois; Peter Lichtner; Lila Rahalison; Jeannine M Petersen; Francois Balloux; Paul Keim; Thierry Wirth; Jacques Ravel; Ruifu Yang; Elisabeth Carniel; Mark Achtman
Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity.
Nature genetics 2010;42(12):1140-3.
2010: Mark Eppinger; Patricia L Worsham; Mikeljon P Nikolich; David R Riley; Yinong Sebastian; Sherry Mou; Mark Achtman; Luther E Lindler; Jacques Ravel
Genome sequence of the deep-rooted Yersinia pestis strain Angola reveals new insights into the evolution and pangenome of the plague bacterium.
Journal of bacteriology 2010;192(6):1685-99.
2009: Mark Eppinger; Zhaobiao Guo; Yinong Sebastian; Yajun Song; Luther E Lindler; Ruifu Yang; Jacques Ravel
Draft genome sequences of Yersinia pestis isolates from natural foci of endemic plague in China.
Journal of bacteriology 2009;191(24):7628-9.
2009: Garry S A Myers; S A Mathews; Mark Eppinger; C Mitchell; K K O'Brien; Owen R White; F Benahmed; Robert brunham; Timothy D Read; Jacques Ravel; Patrik M Bavoil; Peter Timms
Evidence that human Chlamydia pneumoniae was zoonotically acquired.
Journal of bacteriology 2009;191(23):7225-33.
2009: Richard S Stephens; Garry S A Myers; Mark Eppinger; Patrik M Bavoil
Divergence without difference: phylogenetics and taxonomy of Chlamydia resolved.
FEMS immunology and medical microbiology 2009;55(2):115-9.
2007: Mark Eppinger; Mary J Rosovitz; W. Florian Fricke; David Rasko; Galina Kokorina; Corinne Fayolle; Luther E Lindler; Elisabeth Carniel; Jacques Ravel
The complete genome sequence of Yersinia pseudotuberculosis IP31758, the causative agent of Far East scarlet-like fever.
PLoS genetics 2007;3(8):e142.
2007: Raymond K Auerbach; Apichai Tuanyok; William S Probert; Leo Kenefic; Amy J Vogler; David Bruce; Christine Munk; Thomas S Brettin; Mark Eppinger; Jacques Ravel; David M Wagner; Paul Keim
Yersinia pestis evolution on a small timescale: comparison of whole genome sequences from North America.
PloS one 2007;2(8):e770.
2007: Timothy J Welch; W. Florian Fricke; Patrick F McDermott; David G White; Marie-Laure ROSSO; David Rasko; Mark K Mammel; Mark Eppinger; Mary J Rosovitz; David Wagner; Lila Rahalison; J Eugene LeClerc; Jeffrey M Hinshaw; Luther E Lindler; Thomas Cebula; Elisabeth Carniel; Jacques Ravel
Multiple antimicrobial resistance in plague: an emerging public health risk.
PloS one 2007;2(3):e309.
2006: Mark Eppinger; Claudia Baar; Bodo Linz; Günter Raddatz; Christa Lanz; Heike Keller; Giovanna Morelli; Helga Gressmann; Mark Achtman; Stephan C Schuster
Who ate whom? Adaptive Helicobacter genomic changes that accompanied a host jump from early humans to large felines.
PLoS genetics 2006;2(7):e120.
2004: Mark Eppinger; Claudia Baar; Günter Raddatz; Daniel H Huson; Stephan C Schuster
Comparative analysis of four Campylobacterales.
Nature reviews. Microbiology 2004;2(11):872-85.
2004: Snjezana Rendulic; Pratik Jagtap; Andrea Rosinus; Mark Eppinger; Claudia Baar; Christa Lanz; Heike Keller; Carey Lambert; Katy J Evans; Alexander Goesmann; Folker Meyer; R Elizabeth Sockett; Stephan C Schuster
A predator unmasked: life cycle of Bdellovibrio bacteriovorus from a genomic perspective.
Science (New York, N.Y.) 2004;303(5658):689-92.
2003: Claudia Baar; Mark Eppinger; Günter Raddatz; Jörg Simon; Christa Lanz; Oliver Klimmek; Ramkumar Nandakumar; Roland Gross; Andrea Rosinus; Heike Keller; Pratik Jagtap; Burkhard Linke; Folker Meyer; Hermann Lederer; Stephan C Schuster
Complete genome sequence and analysis of Wolinella succinogenes.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(20):11690-5.