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Elisabeth Chapman

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Chemicals & Drugs

Phenomena

RNA Interference

Genes & Molecular Sequences

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Publications

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Noah Fahlgren; Sanjuro Jogdeo; Kristin D Kasschau; Christopher M Sullivan; Elisabeth J Chapman; Sascha Laubinger; Lisa M Smith; Mark Dasenko; Scott A Givan; Detlef Weigel; James C Carrington
MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana.
Hernan Garcia-Ruiz; Atsushi Takeda; Elisabeth J Chapman; Christopher M Sullivan; Noah Fahlgren; Katherine J Brempelis; James C Carrington
Arabidopsis RNA-dependent RNA polymerases and dicer-like proteins in antiviral defense and small interfering RNA biogenesis during Turnip Mosaic Virus infection.
Noah Fahlgren; Christopher M Sullivan; Kristin D Kasschau; Elisabeth J Chapman; Jason S Cumbie; Taiowa A Montgomery; Sunny D Gilbert; Mark Dasenko; Tyler W H Backman; Scott A Givan; James C Carrington
Computational and analytical framework for small RNA profiling by high-throughput sequencing.

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All Publications

2010: Noah Fahlgren; Sanjuro Jogdeo; Kristin D Kasschau; Christopher M Sullivan; Elisabeth J Chapman; Sascha Laubinger; Lisa M Smith; Mark Dasenko; Scott A Givan; Detlef Weigel; James C Carrington
MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana.
The Plant cell 2010;22(4):1074-89.
2010: Hernan Garcia-Ruiz; Atsushi Takeda; Elisabeth J Chapman; Christopher M Sullivan; Noah Fahlgren; Katherine J Brempelis; James C Carrington
Arabidopsis RNA-dependent RNA polymerases and dicer-like proteins in antiviral defense and small interfering RNA biogenesis during Turnip Mosaic Virus infection.
The Plant cell 2010;22(2):481-96.
2009: Noah Fahlgren; Christopher M Sullivan; Kristin D Kasschau; Elisabeth J Chapman; Jason S Cumbie; Taiowa A Montgomery; Sunny D Gilbert; Mark Dasenko; Tyler W H Backman; Scott A Givan; James C Carrington
Computational and analytical framework for small RNA profiling by high-throughput sequencing.
RNA (New York, N.Y.) 2009;15(5):992-1002.
2008: Taiowa A Montgomery; Miya D Howell; josh t cuperus; Dawei Li; Jesse E Hansen; Amanda L Alexander; Elisabeth J Chapman; Noah Fahlgren; Edwards Allen; James C Carrington
Specificity of ARGONAUTE7-miR390 interaction and dual functionality in TAS3 trans-acting siRNA formation.
Cell 2008;133(1):128-41.
2008: Tyler W H Backman; Christopher M Sullivan; Jason S Cumbie; Zachary A Miller; Elisabeth J Chapman; Noah Fahlgren; Scott A Givan; James C Carrington; Kristin D Kasschau
Update of ASRP: the Arabidopsis Small RNA Project database.
Nucleic acids research 2008;36(Database issue):D982-5.
2007: Elisabeth J Chapman; James C Carrington
Specialization and evolution of endogenous small RNA pathways.
Nature reviews. Genetics 2007;8(11):884-96.
2007: Miya D Howell; Noah Fahlgren; Elisabeth J Chapman; Jason S Cumbie; Christopher M Sullivan; Scott A Givan; Kristin D Kasschau; James C Carrington
Genome-wide analysis of the RNA-DEPENDENT RNA POLYMERASE6/DICER-LIKE4 pathway in Arabidopsis reveals dependency on miRNA- and tasiRNA-directed targeting.
The Plant cell 2007;19(3):926-42.
2007: Kristin D Kasschau; Noah Fahlgren; Elisabeth J Chapman; Christopher M Sullivan; Jason S Cumbie; Scott A Givan; James C Carrington
Genome-wide profiling and analysis of Arabidopsis siRNAs.
PLoS biology 2007;5(3):e57.
2007: Noah Fahlgren; Miya D Howell; Kristin D Kasschau; Elisabeth J Chapman; Christopher M Sullivan; Jason S Cumbie; Scott A Givan; Theresa F Law; Sarah R Grant; Jeffery L Dangl; James C Carrington
High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes.
PloS one 2007;2(2):e219.
2006: Lóránt Lakatos; Tibor Csorba; Vitantonio Pantaleo; Elisabeth J Chapman; James C Carrington; Yu-Ping Liu; Valerian V Dolja; Lourdes Fernandez-Calvino; Juan José López-Moya; József Burgyán
Small RNA binding is a common strategy to suppress RNA silencing by several viral suppressors.
The EMBO journal 2006;25(12):2768-80.
2006: Bin Yu; Elisabeth J Chapman; Zhiyong Yang; James C Carrington; Xuemei Chen
Transgenically expressed viral RNA silencing suppressors interfere with microRNA methylation in Arabidopsis.
FEBS letters 2006;580(13):3117-20.
2006: Marin Chiba; Jonathan C Reed; Alexey I Prokhnevsky; Elisabeth J Chapman; Munir Mawassi; Eugene V Koonin; James C Carrington; Valerian V Dolja
Diverse suppressors of RNA silencing enhance agroinfection by a viral replicon.
Virology 2006;346(1):7-14.
2004: Elisabeth J Chapman; Alexey I Prokhnevsky; Kodetham Gopinath; Valerian V Dolja; James C Carrington
Viral RNA silencing suppressors inhibit the microRNA pathway at an intermediate step.
Genes & development 2004;18(10):1179-86.
2003: Kristin D Kasschau; Zhixin Xie; Edwards Allen; Cesar Llave; Elisabeth J Chapman; Kate A Krizan; James C Carrington
P1/HC-Pro, a viral suppressor of RNA silencing, interferes with Arabidopsis development and miRNA unction.
Developmental cell 2003;4(2):205-17.