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Zhukuan Cheng

Research Profile

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Oryza sativa

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Qiming Lv; Zhiqian Pang; Junjun Shang; Jing Wang; Jichen Xu; Xiao Xu; Xianfeng Zhao; Zhuangzhi Zhou; Zhukuan Cheng; Guanghuai Jiang; Shigui Li; Ting Li; Xiaobing Li; Ya Liu; Lihuang Zhu
Functional analysis of pid3-a4, an ortholog of rice blast resistance gene pid3 revealed by allele mining in common wild rice.
Zhukuan Cheng
Analyzing meiotic chromosomes in rice.
Xinru Wu; Ming Li; Ding Tang; Kejian Wang; Zhukuan Cheng
Loose Plant Architecture1, an INDETERMINATE DOMAIN protein involved in shoot gravitropism, regulates plant architecture in rice.

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All Publications

2013: Qiming Lv; Zhiqian Pang; Junjun Shang; Jing Wang; Jichen Xu; Xiao Xu; Xianfeng Zhao; Zhuangzhi Zhou; Zhukuan Cheng; Guanghuai Jiang; Shigui Li; Ting Li; Xiaobing Li; Ya Liu; Lihuang Zhu
Functional analysis of pid3-a4, an ortholog of rice blast resistance gene pid3 revealed by allele mining in common wild rice.
Phytopathology 2013;103(6):594-9.
2013: Zhukuan Cheng
Analyzing meiotic chromosomes in rice.
Methods in molecular biology (Clifton, N.J.) 2013;990():125-34.
2013: Xinru Wu; Ming Li; Ding Tang; Kejian Wang; Zhukuan Cheng
Loose Plant Architecture1, an INDETERMINATE DOMAIN protein involved in shoot gravitropism, regulates plant architecture in rice.
Plant physiology 2013;161(1):317-29.
2012: Mo Wang; Yi Jin; Qiong Luo; Yi Shen; Ding Tang; Kejian Wang; Zhukuan Cheng
BRK1, a Bub1-related kinase, is essential for generating proper tension between homologous kinetochores at metaphase I of rice meiosis.
The Plant cell 2012;24(12):4961-73.
2012: Lilan Hong; Qing Hu; Ming Li; Tiegang Lu; Yi Shen; Ding Tang; Kejian Wang; Zhukuan Cheng
MIL2 (MICROSPORELESS2) regulates early cell differentiation in the rice anther.
The New phytologist 2012;196(2):402-13.
2012: Jianhui Ji; Ming Li; Ding Tang; Kejian Wang; Mo Wang; Lixiao Che; Zhukuan Cheng
The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis.
The Plant journal : for cell and molecular biology 2012;72(1):18-30.
2012: Kejian Wang; Mo Wang; Qing Hu; Tiegang Lu; Chunbo Miao; Yi Shen; Ding Tang; Zhukuan Cheng
The role of rice HEI10 in the formation of meiotic crossovers.
PLoS genetics 2012;8(7):e1002809.
2012: Tian Shao; Ding Tang; Qian Qian; Jun Chen; Zhukuan Cheng; Ming Li; Qiong Luo
A novel gene IBF1 is required for the inhibition of brown pigment deposition in rice hull furrows.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2012;125(2):381-90.
2012: Lilan Hong; Ming Li; Qian Qian; Ding Tang; Kejian Wang; Zhukuan Cheng
A mutation in the rice chalcone isomerase gene causes the golden hull and internode 1 phenotype.
Planta 2012;236(1):141-51.
2012: Yi Shen; Ding Tang; Kejian Wang; Mo Wang; Lilan Hong; Jian Huang; Ming Li; Qiong Luo; Weixiong Luo; Zhukuan Cheng
ZIP4 in homologous chromosome synapsis and crossover formation in rice meiosis.
Journal of cell science 2012;125(Pt 11):2581-91.
2012: Chunhui Xu; Zhukuan Cheng; Weichang Yu
Construction of rice mini-chromosomes by telomere-mediated chromosomal truncation.
The Plant journal : for cell and molecular biology 2012;70(6):1070-9.
2012: Jing Xu; Mei Yang; Zhukuan Cheng; Youli Jian; Yudong Jing; Kai Liu; Xiaojuan Sun; Mo Wang; Chonglin Yang
MRG-1 is required for genomic integrity in Caenorhabditis elegans germ cells.
Cell research 2012;22(5):886-902.
2012: Lilan Hong; Ming Li; Ding Tang; Kejian Wang; Keming Zhu; Zhukuan Cheng
Somatic and reproductive cell development in rice anther is regulated by a putative glutaredoxin.
The Plant cell 2012;24(2):577-88.
2011: Ming Li; Lili Lu; Ding Tang; Kejian Wang; Xinru Wu; Changjie Yan; Hengxiu Yu; Minghong Gu; Zhukuan Cheng
Mutations in the F-box gene LARGER PANICLE improve the panicle architecture and enhance the grain yield in rice.
Plant biotechnology journal 2011;9(9):1002-13.
2011: Mo Wang; Ming Li; Chunbo Miao; Baoxiang Qin; Yi Shen; Ding Tang; Kejian Wang; Zhukuan Cheng
OsSGO1 maintains synaptonemal complex stabilization in addition to protecting centromeric cohesion during rice meiosis.
The Plant journal : for cell and molecular biology 2011;67(4):583-94.
2011: Guixiang Wang; Zhukuan Cheng; Qunyan He; Fan Liu; Paul B Talbert; Weiwei Jin
Characterization of CENH3 proteins and centromere-associated DNA sequences in diploid and allotetraploid Brassica species.
Chromosoma 2011;120(4):353-65.
2011: Tian Shao; Ding Tang; Kejian Wang; Mo Wang; Hengxiu Yu; Lixiao Che; Minghong Gu; Ming Li; Baoxiang Qin; Zhukuan Cheng
OsREC8 is essential for chromatid cohesion and metaphase I monopolar orientation in rice meiosis.
Plant physiology 2011;156(3):1386-96.
2011: Lixiao Che; Ding Tang; Kejian Wang; Mo Wang; Keming Zhu; Hengxiu Yu; Minghong Gu; Zhukuan Cheng
OsAM1 is required for leptotene-zygotene transition in rice.
Cell research 2011;21(4):654-65.
2011: Juan Li; Jiafu Jiang; Qian Qian; Yunyuan Xu; Cui Zhang; Jun Xiao; Cheng Du; Wei Luo; Guoxing Zou; Mingluan Chen; Yunqing Huang; Yuqi Feng; Zhukuan Cheng; Ming Yuan; Kang Chong
Mutation of rice BC12/GDD1, which encodes a kinesin-like protein that binds to a GA biosynthesis gene promoter, leads to dwarfism with impaired cell elongation.
The Plant cell 2011;23(2):628-40.
2011: Chenglin Chai; Jun Fang; Yang Liu; Hongning Tong; Yanqing Gong; Yiqin Wang; Min Liu; Youping Wang; Qian Qian; Zhukuan Cheng; Chengcai Chu
ZEBRA2, encoding a carotenoid isomerase, is involved in photoprotection in rice.
Plant molecular biology 2011;75(3):211-21.
2011: Zhiyun Gong; Xiuxiu Liu; Ding Tang; Hengxiu Yu; Chuandeng Yi; Zhukuan Cheng; Minghong Gu
Non-homologous chromosome pairing and crossover formation in haploid rice meiosis.
Chromosoma 2011;120(1):47-60.
2011: Kejian Wang; Mo Wang; Ding Tang; Yi Shen; Baoxiang Qin; Ming Li; Zhukuan Cheng
PAIR3, an axis-associated protein, is essential for the recruitment of recombination elements onto meiotic chromosomes in rice.
Molecular biology of the cell 2011;22(1):12-9.
2010: Hengxiu Yu; Mo Wang; Ding Tang; Kejian Wang; Fuli Chen; Zhiyun Gong; Minghong Gu; Zhukuan Cheng
OsSPO11-1 is essential for both homologous chromosome pairing and crossover formation in rice.
Chromosoma 2010;119(6):625-36.
2010: Lilan Hong; qin qian; Keming Zhu; Ding Tang; Zejun Huang; Ling Gao; Ming Li; Minghong Gu; Zhukuan Cheng
ELE restrains empty glumes from developing into lemmas.
Journal of genetics and genomics = Yi chuan xue bao 2010;37(2):101-15.
2010: Mo Wang; Kejian Wang; Ding Tang; Cunxu Wei; Ming Li; Yi Shen; Zhengchang Chi; Minghong Gu; Zhukuan Cheng
The central element protein ZEP1 of the synaptonemal complex regulates the number of crossovers during meiosis in rice.
The Plant cell 2010;22(2):417-30.
2010: Keming Zhu; Ding Tang; Changjie Yan; Zhengchang Chi; Hengxiu Yu; Jianmin Chen; Jiansheng Liang; Minghong Gu; Zhukuan Cheng
Erect panicle2 encodes a novel protein that regulates panicle erectness in indica rice.
Genetics 2010;184(2):343-50.
2010: Jian Huang; Ding Tang; Yi Shen; Baoxiang Qin; Lilan Hong; Aiqing You; Ming Li; Xin Wang; Hengxiu Yu; Minghong Gu; Zhukuan Cheng
Activation of gibberellin 2-oxidase 6 decreases active gibberellin levels and creates a dominant semi-dwarf phenotype in rice (Oryza sativa L.).
Journal of genetics and genomics = Yi chuan xue bao 2010;37(1):23-36.
2010: Kejian Wang; Ding Tang; Lilan Hong; Wenying Xu; Jian Huang; Ming Li; Minghong Gu; Yongbiao Xue; Zhukuan Cheng
DEP and AFO regulate reproductive habit in rice.
PLoS genetics 2010;6(1):e1000818.
2009: Ming Li; Guangyan Xiong; Rui Li; Jiajun Cui; Ding Tang; Baocai ZHANG; Markus Pauly; Zhukuan Cheng; Yihua Zhou
Rice cellulose synthase-like D4 is essential for normal cell-wall biosynthesis and plant growth.
The Plant journal : for cell and molecular biology 2009;60(6):1055-69.
2009: Dongying Gao; Navdeep Gill; Hye-Ran Kim; Jason G Walling; Wenli Zhang; Chuanzhu Fan; Yeisoo Yu; Jianxin Ma; Phillip SanMiguel; Ning Jiang; Zhukuan Cheng; Rod A Wing; Jiming Jiang; Scott A Jackson
A lineage-specific centromere retrotransposon in Oryza brachyantha.
The Plant journal : for cell and molecular biology 2009;60(5):820-31.
2009: Junjun Shang; Yong Tao; Xuewei Chen; Yan Zou; Cailin Lei; Jing Wang; Xiaobing Li; Xianfeng Zhao; Meijun Zhang; Zhike Lu; Jichen Xu; Zhukuan Cheng; Jianmin Wan; Lihuang Zhu
Identification of a new rice blast resistance gene, Pid3, by genomewide comparison of paired nucleotide-binding site--leucine-rich repeat genes and their pseudogene alleles between the two sequenced rice genomes.
Genetics 2009;182(4):1303-11.
2009: Yongbiao Xue; Yijing Zhang; Qiuying Yang; Qun Li; Zhukuan Cheng; Hugh G Dickinson
Genetic features of a pollen-part mutation suggest an inhibitory role for the Antirrhinum pollen self-incompatibility determinant.
Plant molecular biology 2009;70(5):499-509.
2009: Kejian Wang; Ding Tang; Mo Wang; Jufei Lu; Hengxiu Yu; Jiafan Liu; Baoxiang Qian; Zhiyun Gong; Xin Wang; Jianmin Chen; Minghong Gu; Zhukuan Cheng
MER3 is required for normal meiotic crossover formation, but not for presynaptic alignment in rice.
Journal of cell science 2009;122(Pt 12):2055-63.
2009: Xudong Cheng; Dongfeng Zhang; Zhukuan Cheng; Beat Keller; Hong-Qing Ling
A new family of Ty1-copia-like retrotransposons originated in the tomato genome by a recent horizontal transfer event.
Genetics 2009;181(4):1183-93.
2009: Jian Huang; Kewei Zhang; Yi Shen; Zejun Huang; Ming Li; Ding Tang; Minghong Gu; Zhukuan Cheng
Identification of a high frequency transposon induced by tissue culture, nDaiZ, a member of the hAT family in rice.
Genomics 2009;93(3):274-81.
2009: Fei Lu; Jetty S S Ammiraju; Abhijit Sanyal; Shengli Zhang; Rentao Song; Jinfeng Chen; Guisheng Li; Yi Sui; Xiang Song; Zhukuan Cheng; Antonio Costa de Oliveira; Jeffrey L Bennetzen; Scott A Jackson; Rod A Wing; Mingsheng Chen
Comparative sequence analysis of MONOCULM1-orthologous regions in 14 Oryza genomes.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(6):2071-6.
2008: Dongfen Zhang; Qiuying Yang; Yong Ding; Xiaofeng Cao; Yongbiao Xue; Zhukuan Cheng
Cytological characterization of the tandem repetitive sequences and their methylation status in the Antirrhinum majus genome.
Genomics 2008;92(2):107-14.
2008: Changbao Li; Jiuhai Zhao; Hongling Jiang; Yu Geng; Yuanyuan Dai; Huajie Fan; Dongfen Zhang; Jinfeng Chen; Fei Lu; Jinfeng Shi; Shouhong Sun; Jianjun Chen; Xiaohua Yang; Chen Lu; Mingsheng Chen; Zhukuan Cheng; Hongqing Ling; Ying Wang; Yongbiao Xue; Chuanyou Li
A snapshot of the Chinese SOL Project.
Journal of genetics and genomics = Yi chuan xue bao 2008;35(7):387-90.
2008: Saihua Chen; Yi Yang; Weiwei Shi; Qing Ji; Fei He; Ziding Zhang; Zhukuan Cheng; Xiangnong Liu; Mingliang Xu
Badh2, encoding betaine aldehyde dehydrogenase, inhibits the biosynthesis of 2-acetyl-1-pyrroline, a major component in rice fragrance.
The Plant cell 2008;20(7):1850-61.
2008: Jun Fang; Chenglin Chai; Qian Qian; Chunlai Li; Jiuyou Tang; Lei Sun; Zejun Huang; Xiaoli Guo; Changhui Sun; Min Liu; Yan Zhang; Qingtao Lu; Yiqin Wang; Congming Lu; Bin Han; Fan Chen; Zhukuan Cheng; Chengcai Chu
Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice.
The Plant journal : for cell and molecular biology 2008;54(2):177-89.
2007: Qiuying Yang; Dongfen Zhang; Qun Li; Zhukuan Cheng; Yongbiao Xue
Heterochromatic and genetic features are consistent with recombination suppression of the self-incompatibility locus in Antirrhinum.
The Plant journal : for cell and molecular biology 2007;51(1):140-51.
2007: Li Jiang; Wenli Zhang; Zhihui Xia; Guanghuai Jiang; qin qian; Aili Li; Zhukuan Cheng; Lihuang Zhu; Long Mao; Wenxue Zhai
A paracentric inversion suppresses genetic recombination at the FON3 locus with breakpoints corresponding to sequence gaps on rice chromosome 11L.
Molecular genetics and genomics : MGG 2007;277(3):263-72.
2007: Yunlai Tang; Xiaogang Wen; Qingtao Lu; Zhipan Yang; Zhukuan Cheng; Congming Lu
Heat stress induces an aggregation of the light-harvesting complex of photosystem II in spinach plants.
Plant physiology 2007;143(2):629-38.
2007: Yong Ding; Xia Wang; Lei Su; Jixian Zhai; Shouyun Cao; Dongfen Zhang; Chunyan Liu; Yuping Bi; Qian Qian; Zhukuan Cheng; Chengcai Chu; Xiaofeng Cao
SDG714, a histone H3K9 methyltransferase, is involved in Tos17 DNA methylation and transposition in rice.
The Plant cell 2007;19(1):9-22.
2006: Caiyan Chen; Han Xiao; Wenli Zhang; Aiju Wang; Zhihui Xia; Xiaobing Li; Wenxue Zhai; Zhukuan Cheng; Lihuang Zhu
Adapting rice anther culture to gene transformation and RNA interference.
Science in China. Series C, Life sciences / Chinese Academy of Sciences 2006;49(5):414-28.
2006: Chunmin Ge; Xia Cui; Yonghong Wang; Yuxin Hu; Zhiming Fu; Dongfen Zhang; Zhukuan Cheng; Jiayang Li
BUD2, encoding an S-adenosylmethionine decarboxylase, is required for Arabidopsis growth and development.
Cell research 2006;16(5):446-56.
2006: Weidong Bao; Wenli Zhang; Qiuying Yang; Yu Zhang; Bin Han; Minghong Gu; Yongbiao Xue; Zhukuan Cheng
Diversity of centromeric repeats in two closely related wild rice species, Oryza officinalis and Oryza rhizomatis.
Molecular genetics and genomics : MGG 2006;275(5):421-30.
2006: Ying Wang; Xiaomin Tang; Zhukuan Cheng; Lukas Mueller; James J Giovannoni; Steven D Tanksley
Euchromatin and pericentromeric heterochromatin: comparative composition in the tomato genome.
Genetics 2006;172(4):2529-40.
2006: Kewei Zhang; Qian Qian; Zejun Huang; Yiqin Wang; Ming Li; Lilan Hong; Dali Zeng; Minghong Gu; Chengcai Chu; Zhukuan Cheng
GOLD HULL AND INTERNODE2 encodes a primarily multifunctional cinnamyl-alcohol dehydrogenase in rice.
Plant physiology 2006;140(3):972-83.
2006: Lei Li; xiangfeng wang; Viktor Stolc; Xueyong Li; Dongfen Zhang; Ning Su; Waraporn Tongprasit; Songgang Li; Zhukuan Cheng; Jun Wang; Xing Wang Deng
Genome-wide transcription analyses in rice using tiling microarrays.
Nature genetics 2006;38(1):124-9.
2005: Wenli Zhang; Chuandeng Yi; Weidong Bao; Bin Liu; Jiajun Cui; Hengxiu Yu; Xiaofeng Cao; Minghong Gu; Min Liu; Zhukuan Cheng
The transcribed 165-bp CentO satellite is the major functional centromeric element in the wild rice species Oryza punctata.
Plant physiology 2005;139(1):306-15.
2005: Hye-Ran Lee; Wenli Zhang; Tim Langdon; Weiwei Jin; Huihuang Yan; Zhukuan Cheng; Jiming Jiang
Chromatin immunoprecipitation cloning reveals rapid evolutionary patterns of centromeric DNA in Oryza species.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(33):11793-8.
2005: Romain Guyot; Xudong Cheng; Yan Su; Zhukuan Cheng; Edith Schlagenhauf; Beat Keller; Hong-Qing Ling
Complex organization and evolution of the tomato pericentromeric region at the FER gene locus.
Plant physiology 2005;138(3):1205-15.
2005: Yuling Jiao; Peixin Jia; xiangfeng wang; Ning Su; Shuliang Yu; Dongfen Zhang; Ligeng Ma; Qi Feng; Zhaoqing Jin; Lei Li; Yongbiao Xue; Zhukuan Cheng; Hongyu Zhao; Bin Han; Xing Wang Deng
A tiling microarray expression analysis of rice chromosome 4 suggests a chromosome-level regulation of transcription.
The Plant cell 2005;17(6):1641-57.
2005: Kiyotaka Nagaki; Pavel Neumann; Dongfen Zhang; Shu Ouyang; C Robin Buell; Zhukuan Cheng; Jiming Jiang
Structure, divergence, and distribution of the CRR centromeric retrotransposon family in rice.
Molecular biology and evolution 2005;22(4):845-55.
2005: Dongfen Zhang; Qiuying Yang; Weidong Bao; Yu Zhang; Bin Han; Yongbiao Xue; Zhukuan Cheng
Molecular cytogenetic characterization of the Antirrhinum majus genome.
Genetics 2005;169(1):325-35.
2004: Kiyotaka Nagaki; Zhukuan Cheng; Shu Ouyang; Paul B Talbert; Mary Kim; Kristine M Jones; Steven Henikoff; C Robin Buell; Jiming Jiang
Sequencing of a rice centromere uncovers active genes.
Nature genetics 2004;36(2):138-45.
2004: Yu Zhang; Yuchen Huang; Lei Zhang; Ying Li; Tingting Lu; Yiqi Lu; Qi Feng; Qiang Zhao; Zhukuan Cheng; Yongbiao Xue; Rod A Wing; Bin Han
Structural features of the rice chromosome 4 centromere.
Nucleic acids research 2004;32(6):2023-30.
2002: Robert M Stupar; Junqi Song; Ahmet L. Tek; Zhukuan Cheng; Fenggao Dong; Jiming Jiang
Highly condensed potato pericentromeric heterochromatin contains rDNA-related tandem repeats.
Genetics 2002;162(3):1435-44.
2002: Zhukuan Cheng; Fenggao Dong; Tim Langdon; Shu Ouyang; C Robin Buell; Minghong Gu; Frederick R Blattner; Jiming Jiang
Functional rice centromeres are marked by a satellite repeat and a centromere-specific retrotransposon.
The Plant cell 2002;14(8):1691-704.
2002: Ning Jiang; Zhirong Bao; Svetlana Temnykh; Zhukuan Cheng; Jiming Jiang; Rod A Wing; Susan R McCouch; Susan R Wessler
Dasheng: a recently amplified nonautonomous long terminal repeat element that is a major component of pericentromeric regions in rice.
Genetics 2002;161(3):1293-305.
2002: Zhukuan Cheng; C Robin Buell; Rod A Wing; Jiming Jiang
Resolution of fluorescence in-situ hybridization mapping on rice mitotic prometaphase chromosomes, meiotic pachytene chromosomes and extended DNA fibers.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 2002;10(5):379-87.
2001: Zhukuan Cheng; C Robin Buell; Rod A Wing; Minghong Gu; Jiming Jiang
Toward a cytological characterization of the rice genome.
Genome research 2001;11(12):2133-41.
2001: Robert M Stupar; jenny lilly; Christopher D Town; Zhukuan Cheng; S Kaul; C Robin Buell; Jiming Jiang
Complex mtDNA constitutes an approximate 620-kb insertion on Arabidopsis thaliana chromosome 2: implication of potential sequencing errors caused by large-unit repeats.
Proceedings of the National Academy of Sciences of the United States of America 2001;98(9):5099-103.
2001: Zhukuan Cheng; Robert M Stupar; Minghong Gu; Jiming Jiang
A tandemly repeated DNA sequence is associated with both knob-like heterochromatin and a highly decondensed structure in the meiotic pachytene chromosomes of rice.
Chromosoma 2001;110(1):24-31.
2001: Zhukuan Cheng; GG Presting; C Robin Buell; Rod A Wing; Jiming Jiang
High-resolution pachytene chromosome mapping of bacterial artificial chromosomes anchored by genetic markers reveals the centromere location and the distribution of genetic recombination along chromosome 10 of rice.
Genetics 2001;157(4):1749-57.
2000: SA Jackson; Zhukuan Cheng; M L Wang; H M Goodman; Jiming Jiang
Comparative fluorescence in situ hybridization mapping of a 431-kb Arabidopsis thaliana bacterial artificial chromosome contig reveals the role of chromosomal duplications in the expansion of the Brassica rapa genome.
Genetics 2000;156(2):833-8.