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John Coffin
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17
Maldarelli, Frank
14
Stoye, Jonathan
13
Palmer, Sarah
12
Mellors, John
12
Tsichlis, Philip
7
Rouzine, Igor
7
Kearney, Mary
6
Dewar, Robin
6
Temin, Howard
6
Metcalf, Julia
5
Pathak, Vinay
5
Boltz, Valerie
5
KewalRamani, Vineet
4
Hughes, Jennifer
4
Parsons, Thomas
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All Publications
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2009: Coffin John M; Stoye Jonathan P
Virology. A new virus for old diseases?
Science (New York, N.Y.) 2009;326(5952):530-1.
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2009: Pereyra Florencia; Palmer Sarah; Miura Toshiyuki; Block Brian L; Wiegand Ann; Rothchild Alissa C; Baker Brett; Rosenberg Rachel; Cutrell Emily; Seaman Michael S; Coffin John M; Walker Bruce D
Persistent low-level viremia in HIV-1 elite controllers and relationship to immunologic parameters.
The Journal of infectious diseases 2009;200(6):984-90.
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2009: Chen Jianbo; Nikolaitchik Olga; Singh Jatinder; Wright Andrew; Bencsics Craig E; Coffin John M; Ni Na; Lockett Stephen; Pathak Vinay K; Hu Wei-Shau
High efficiency of HIV-1 genomic RNA packaging and heterozygote formation revealed by single virion analysis.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(32):13535-40.
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2009: Dinoso J B; Kim S Y; Wiegand A M; Palmer S E; Gange S J; Cranmer L; O'Shea A; Callender M; Spivak A; Brennan T; Kearney M F; Proschan M A; Mican J M; Rehm C A; Coffin J M; Mellors J W; Siliciano R F; Maldarelli F
Treatment intensification does not reduce residual HIV-1 viremia in patients on highly active antiretroviral therapy.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(23):9403-8.
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2009: Nies-Kraske Elizabeth; Schacker Timothy W; Condoluci David; Orenstein Jan; Brenchley Jason; Fox Cecil; Daucher Marybeth; Dewar Robin; Urban Elizabeth; Hill Brenna; Guenaga Javier; Hoover Shelley; Maldarelli Frank; Hallahan Claire W; Horn Judith; Kottilil Shyamasundaran; Chun Tae-Wook; Folino Marlene; Palmer Sara; Wiegand Ann; O'Shea M Angeline; Metcalf Julia A; Douek Daniel C; Coffin John; Haase Ashley; Fauci Anthony S; Dybul Mark
Evaluation of the pathogenesis of decreasing CD4(+) T cell counts in human immunodeficiency virus type 1-infected patients receiving successfully suppressive antiretroviral therapy.
The Journal of infectious diseases 2009;199(11):1648-56.
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2009: Jern Patric; Russell Rebecca A; Pathak Vinay K; Coffin John M
Likely role of APOBEC3G-mediated G-to-A mutations in HIV-1 evolution and drug resistance.
PLoS pathogens 2009;5(4):e1000367.
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2009: Wilkin Timothy J; McKinnon John E; DiRienzo A Gregory; Mollan Katie; Fletcher Courtney V; Margolis David M; Bastow Barbara; Thal Gary; Woodward William; Godfrey Catherine; Wiegand Ann; Maldarelli Frank; Palmer Sarah; Coffin John M; Mellors John W; Swindells Susan
Regimen simplification to atazanavir-ritonavir alone as maintenance antiretroviral therapy: final 48-week clinical and virologic outcomes.
The Journal of infectious diseases 2009;199(6):866-71.
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2009: Kearney M; Maldarelli F; Shao W; Margolick J B; Daar E S; Mellors J W; Rao V; Coffin J M; Palmer S
Human immunodeficiency virus type 1 population genetics and adaptation in newly infected individuals.
Journal of virology 2009;83(6):2715-27.
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2009: Shao Wei; Kearney Mary; Maldarelli Frank; Mellors John W; Stephens Robert M; Lifson Jeffrey D; KewalRamani Vineet N; Ambrose Zandrea; Coffin John M; Palmer Sarah E
RT-SHIV subpopulation dynamics in infected macaques during anti-HIV therapy.
Retrovirology 2009;6():101.
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2008: Migueles Stephen A; Osborne Christine M; Royce Cassandra; Compton Alex A; Joshi Rohan P; Weeks Kristin A; Rood Julia E; Berkley Amy M; Sacha Jonah B; Cogliano-Shutta Nancy A; Lloyd Margaret; Roby Gregg; Kwan Richard; McLaughlin Mary; Stallings Sara; Rehm Catherine; O'Shea Marie A; Mican JoAnn; Packard Beverly Z; Komoriya Akira; Palmer Sarah; Wiegand Ann P; Maldarelli Frank; Coffin John M; Mellors John W; Hallahan Claire W; Follman Dean A; Connors Mark
Lytic granule loading of CD8+ T cells is required for HIV-infected cell elimination associated with immune control.
Immunity 2008;29(6):1009-21.
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2008: Coffin John M
Attenuation by a thousand cuts.
The New England journal of medicine 2008;359(21):2283-5.
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2008: Jern Patric; Coffin John M
Host-retrovirus arms race: trimming the budget.
Cell host & microbe 2008;4(3):196-7.
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2008: Delviks-Frankenberry Krista A; Nikolenko Galina N; Boyer Paul L; Hughes Stephen H; Coffin John M; Jere Abhay; Pathak Vinay K
HIV-1 reverse transcriptase connection subdomain mutations reduce template RNA degradation and enhance AZT excision.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(31):10943-8.
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2008: Hare C Bradley; Mellors John; Krambrink Amy; Su Zhaohui; Skiest Daniel; Margolis David M; Patel Sheran S; Barnas Douglas; Frenkel Lisa; Coombs Robert W; Aweeka Francesca; Morse Gene D; Haas David W; Boltz Valerie; Palmer Sarah; Coffin John; Havlir Diane V
Detection of nonnucleoside reverse-transcriptase inhibitor-resistant HIV-1 after discontinuation of virologically suppressive antiretroviral therapy.
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2008;47(3):421-4.
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2008: Rulli Samuel J; Mirro Jane; Hill Shawn A; Lloyd Patricia; Gorelick Robert J; Coffin John M; Derse David; Rein Alan
Interactions of murine APOBEC3 and human APOBEC3G with murine leukemia viruses.
Journal of virology 2008;82(13):6566-75.
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2008: Archin Nancy M; Eron Joseph J; Palmer Sarah; Hartmann-Duff Anne; Martinson Jeffery A; Wiegand Ann; Bandarenko Nicholas; Schmitz John L; Bosch Ronald J; Landay Alan L; Coffin John M; Margolis David M
Valproic acid without intensified antiviral therapy has limited impact on persistent HIV infection of resting CD4+ T cells.
AIDS (London, England) 2008;22(10):1131-5.
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2008: Sheng Li; Cai Fang; Zhu Yong; Pal Achintya; Athanasiou Meropi; Orrison Brian; Blair Donald G; Hughes Stephen H; Coffin John M; Lewis Andrew M; Peden Keith
Oncogenicity of DNA in vivo: tumor induction with expression plasmids for activated H-ras and c-myc.
Biologicals : journal of the International Association of Biological Standardization 2008;36(3):184-97.
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2008: Palmer Sarah; Maldarelli Frank; Wiegand Ann; Bernstein Barry; Hanna George J; Brun Scott C; Kempf Dale J; Mellors John W; Coffin John M; King Martin S
Low-level viremia persists for at least 7 years in patients on suppressive antiretroviral therapy.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(10):3879-84.
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2008: Kearney Mary; Palmer Sarah; Maldarelli Frank; Shao Wei; Polis Michael A; Mican JoAnn; Rock-Kress Diane; Margolick Joseph B; Coffin John M; Mellors John W
Frequent polymorphism at drug resistance sites in HIV-1 protease and reverse transcriptase.
AIDS (London, England) 2008;22(4):497-501.
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2008: Jern Patric; Coffin John M
Effects of retroviruses on host genome function.
Annual review of genetics 2008;42():709-32.
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2007: Kaufmann Daniel E; Kavanagh Daniel G; Pereyra Florencia; Zaunders John J; Mackey Elizabeth W; Miura Toshiyuki; Palmer Sarah; Brockman Mark; Rathod Almas; Piechocka-Trocha Alicja; Baker Brett; Zhu Baogong; Le Gall Sylvie; Waring Michael T; Ahern Ryan; Moss Kristin; Kelleher Anthony D; Coffin John M; Freeman Gordon J; Rosenberg Eric S; Walker Bruce D
Upregulation of CTLA-4 by HIV-specific CD4+ T cells correlates with disease progression and defines a reversible immune dysfunction.
Nature immunology 2007;8(11):1246-54.
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2007: Ambrose Zandrea; Palmer Sarah; Boltz Valerie F; Kearney Mary; Larsen Kay; Polacino Patricia; Flanary Leon; Oswald Kelli; Piatak Michael; Smedley Jeremy; Shao Wei; Bischofberger Norbert; Maldarelli Frank; Kimata Jason T; Mellors John W; Hu Shiu-Lok; Coffin John M; Lifson Jeffrey D; KewalRamani Vineet N
Suppression of viremia and evolution of human immunodeficiency virus type 1 drug resistance in a macaque model for antiretroviral therapy.
Journal of virology 2007;81(22):12145-55.
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2007: Jern Patric; Stoye Jonathan P; Coffin John M
Role of APOBEC3 in genetic diversity among endogenous murine leukemia viruses.
PLoS genetics 2007;3(10):2014-22.
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2007: Maldarelli Frank; Palmer Sarah; King Martin S; Wiegand Ann; Polis Michael A; Mican JoAnn; Kovacs Joseph A; Davey Richard T; Rock-Kress Diane; Dewar Robin; Liu Shuying; Metcalf Julia A; Rehm Catherine; Brun Scott C; Hanna George J; Kempf Dale J; Coffin John M; Mellors John W
ART suppresses plasma HIV-1 RNA to a stable set point predicted by pretherapy viremia.
PLoS pathogens 2007;3(4):e46.
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2007: Rouzine I M; Coffin J M
Highly fit ancestors of a partly sexual haploid population.
Theoretical population biology 2007;71(2):239-50.
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2007: Gheorghiu-Svirschevski S; Rouzine I M; Coffin J M
Increasing sequence correlation limits the efficiency of recombination in a multisite evolution model.
Molecular biology and evolution 2007;24(2):574-86.
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2007: Nikolenko Galina N; Delviks-Frankenberry Krista A; Palmer Sarah; Maldarelli Frank; Fivash Matthew J; Coffin John M; Pathak Vinay K
Mutations in the connection domain of HIV-1 reverse transcriptase increase 3'-azido-3'-deoxythymidine resistance.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(1):317-22.
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2006: Halvas Elias K; Aldrovandi Grace M; Balfe Peter; Beck Ingrid A; Boltz Valerie F; Coffin John M; Frenkel Lisa M; Hazelwood J Darren; Johnson Victoria A; Kearney Mary; Kovacs Andrea; Kuritzkes Daniel R; Metzner Karin J; Nissley Dwight V; Nowicki Marek; Palmer Sarah; Ziermann Rainer; Zhao Richard Y; Jennings Cheryl L; Bremer James; Brambilla Don; Mellors John W
Blinded, multicenter comparison of methods to detect a drug-resistant mutant of human immunodeficiency virus type 1 at low frequency.
Journal of clinical microbiology 2006;44(7):2612-4.
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2006: Palmer S; Boltz V; Martinson N; Maldarelli F; Gray G; McIntyre J; Mellors J; Morris L; Coffin J
Persistence of nevirapine-resistant HIV-1 in women after single-dose nevirapine therapy for prevention of maternal-to-fetal HIV-1 transmission.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(18):7094-9.
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2006: Palmer Sarah; Boltz Valerie; Maldarelli Frank; Kearney Mary; Halvas Elias K; Rock Diane; Falloon Judith; Davey Richard T; Dewar Robin L; Metcalf Julia A; Mellors John W; Coffin John M
Selection and persistence of non-nucleoside reverse transcriptase inhibitor-resistant HIV-1 in patients starting and stopping non-nucleoside therapy.
AIDS (London, England) 2006;20(5):701-10.
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2006: Rainey G Jonah A; Coffin John M
Evolution of broad host range in retroviruses leads to cell death mediated by highly cytopathic variants.
Journal of virology 2006;80(2):562-70.
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2005: Hughes Jennifer F; Coffin John M
Human endogenous retroviral elements as indicators of ectopic recombination events in the primate genome.
Genetics 2005;171(3):1183-94.
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2005: Lehrman Ginger; Hogue Ian B; Palmer Sarah; Jennings Cheryl; Spina Celsa A; Wiegand Ann; Landay Alan L; Coombs Robert W; Richman Douglas D; Mellors John W; Coffin John M; Bosch Ronald J; Margolis David M
Depletion of latent HIV-1 infection in vivo: a proof-of-concept study.
Lancet 2005;366(9485):549-55.
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2005: Tipper Christopher H; Bencsics Craig E; Coffin John M
Characterization of hortulanus endogenous murine leukemia virus, an endogenous provirus that encodes an infectious murine leukemia virus of a novel subgroup.
Journal of virology 2005;79(13):8316-29.
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2005: Rouzine I M; Coffin J M
Evolution of human immunodeficiency virus under selection and weak recombination.
Genetics 2005;170(1):7-18.
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2005: Holman Alexander G; Coffin John M
Symmetrical base preferences surrounding HIV-1, avian sarcoma/leukosis virus, and murine leukemia virus integration sites.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(17):6103-7.
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2005: Nikolenko Galina N; Palmer Sarah; Maldarelli Frank; Mellors John W; Coffin John M; Pathak Vinay K
Mechanism for nucleoside analog-mediated abrogation of HIV-1 replication: balance between RNase H activity and nucleotide excision.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(6):2093-8.
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2005: Maxfield Lori F; Fraize Camilla D; Coffin John M
Relationship between retroviral DNA-integration-site selection and host cell transcription.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(5):1436-41.
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2005: Palmer Sarah; Kearney Mary; Maldarelli Frank; Halvas Elias K; Bixby Christian J; Bazmi Holly; Rock Diane; Falloon Judith; Davey Richard T; Dewar Robin L; Metcalf Julia A; Hammer Scott; Mellors John W; Coffin John M
Multiple, linked human immunodeficiency virus type 1 drug resistance mutations in treatment-experienced patients are missed by standard genotype analysis.
Journal of clinical microbiology 2005;43(1):406-13.
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2004: Ambrose Zandrea; Boltz Valerie; Palmer Sarah; Coffin John M; Hughes Stephen H; Kewalramani Vineet N
In vitro characterization of a simian immunodeficiency virus-human immunodeficiency virus (HIV) chimera expressing HIV type 1 reverse transcriptase to study antiviral resistance in pigtail macaques.
Journal of virology 2004;78(24):13553-61.
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2004: Achaz G; Palmer S; Kearney M; Maldarelli F; Mellors J W; Coffin J M; Wakeley J
A robust measure of HIV-1 population turnover within chronically infected individuals.
Molecular biology and evolution 2004;21(10):1902-12.
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2004: Coffin John M
Evolution of retroviruses: fossils in our DNA.
Proceedings of the American Philosophical Society 2004;148(3):264-80.
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2004: Dybul Mark; Nies-Kraske Elizabeth; Dewar Robin; Maldarelli Frank; Hallahan Claire W; Daucher Marybeth; Piscitelli Stephen C; Ehler Linda; Weigand Ann; Palmer Sarah; Metcalf Julia A; Davey Richard T; Rock Kress Diane M; Powers April; Beck Ingrid; Frenkel Lisa; Baseler Michael; Coffin John; Fauci Anthony S
A proof-of-concept study of short-cycle intermittent antiretroviral therapy with a once-daily regimen of didanosine, lamivudine, and efavirenz for the treatment of chronic HIV infection.
The Journal of infectious diseases 2004;189(11):1974-82.
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2004: Yu Qin; König Renate; Pillai Satish; Chiles Kristopher; Kearney Mary; Palmer Sarah; Richman Douglas; Coffin John M; Landau Nathaniel R
Single-strand specificity of APOBEC3G accounts for minus-strand deamination of the HIV genome.
Nature structural & molecular biology 2004;11(5):435-42.
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2004: Hughes Jennifer F; Coffin John M
Human endogenous retrovirus K solo-LTR formation and insertional polymorphisms: implications for human and viral evolution.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(6):1668-72.
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2004: Dang Que; Chen Jianbo; Unutmaz Derya; Coffin John M; Pathak Vinay K; Powell Douglas; KewalRamani Vineet N; Maldarelli Frank; Hu Wei-Shau
Nonrandom HIV-1 infection and double infection via direct and cell-mediated pathways.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(2):632-7.
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2003: Palmer Sarah; Wiegand Ann P; Maldarelli Frank; Bazmi Holly; Mican JoAnn M; Polis Michael; Dewar Robin L; Planta Angeline; Liu Shuying; Metcalf Julia A; Mellors John W; Coffin John M
New real-time reverse transcriptase-initiated PCR assay with single-copy sensitivity for human immunodeficiency virus type 1 RNA in plasma.
Journal of clinical microbiology 2003;41(10):4531-6.
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2003: KewalRamani Vineet N; Coffin John M
Virology. Weapons of mutational destruction.
Science (New York, N.Y.) 2003;301(5635):923-5.
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2003: Rainey G Jonah A; Natonson Andrew; Maxfield Lori F; Coffin John M
Mechanisms of avian retroviral host range extension.
Journal of virology 2003;77(12):6709-19.
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2003: Rouzine Igor M; Wakeley John; Coffin John M
The solitary wave of asexual evolution.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(2):587-92.
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2002: Hughes Jennifer F; Coffin John M
A novel endogenous retrovirus-related element in the human genome resembles a DNA transposon: evidence for an evolutionary link?
Genomics 2002;80(5):453-5.
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2001: Hughes J F; Coffin J M
Evidence for genomic rearrangements mediated by human endogenous retroviruses during primate evolution.
Nature genetics 2001;29(4):487-9.
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2001: Rouzine I M; Rodrigo A; Coffin J M
Transition between stochastic evolution and deterministic evolution in the presence of selection: general theory and application to virology.
Microbiology and molecular biology reviews : MMBR 2001;65(1):151-85.
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2001: Zhou H; Rainey G J; Wong S K; Coffin J M
Substrate sequence selection by retroviral integrase.
Journal of virology 2001;75(3):1359-70.
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2000: Tovar Sepúlveda V A; Berdel B; Coffin J M; Reuss F U
Mouse mammary tumor virus superantigen expression is reduced by glucocorticoid treatment.
Virology 2000;275(1):98-106.
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2000: Weidhaas J B; Angelichio E L; Fenner S; Coffin J M
Relationship between retroviral DNA integration and gene expression.
Journal of virology 2000;74(18):8382-9.
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2000: Reuss F U; Coffin J M
The mouse mammary tumor virus transcription enhancers for hematopoietic progenitor and mammary gland cells share functional elements.
Journal of virology 2000;74(17):8183-7.
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2000: Stoye J P; Coffin J M
A provirus put to work.
Nature 2000;403(6771):715, 717.
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1999: Rouzine I M; Coffin J M
Search for the mechanism of genetic variation in the pro gene of human immunodeficiency virus.
Journal of virology 1999;73(10):8167-78.
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1999: Rouzine I M; Coffin J M
Linkage disequilibrium test implies a large effective population number for HIV in vivo.
Proceedings of the National Academy of Sciences of the United States of America 1999;96(19):10758-63.
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1999: Aschoff J M; Foster D; Coffin J M
Point mutations in the avian sarcoma/leukosis virus 3' untranslated region result in a packaging defect.
Journal of virology 1999;73(9):7421-9.
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1999: Johnson W E; Coffin J M
Constructing primate phylogenies from ancient retrovirus sequences.
Proceedings of the National Academy of Sciences of the United States of America 1999;96(18):10254-60.
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1999: Tomonaga K; Coffin J M
Structures of endogenous nonecotropic murine leukemia virus (MLV) long terminal repeats in wild mice: implication for evolution of MLVs.
Journal of virology 1999;73(5):4327-40.
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1998: Tomonaga K; Coffin J M
Structure and distribution of endogenous nonecotropic murine leukemia viruses in wild mice.
Journal of virology 1998;72(10):8289-300.
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1998: Reuss F U; Coffin J M
Mouse mammary tumor virus superantigen expression in B cells is regulated by a central enhancer within the pol gene.
Journal of virology 1998;72(7):6073-82.
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1997: Taplitz R A; Coffin J M
Selection of an avian retrovirus mutant with extended receptor usage.
Journal of virology 1997;71(10):7814-9.
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1997: Bonhoeffer S; Coffin J M; Nowak M A
Human immunodeficiency virus drug therapy and virus load.
Journal of virology 1997;71(4):3275-8.
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1996: Coffin J M
HIV viral dynamics.
AIDS (London, England) 1996;10 Suppl 3():S75-84.
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1996: Reuss F U; Frankel W N; Moriwaki K; Shiroishi T; Coffin J M
Genetics of intracisternal-A-particle-related envelope-encoding proviral elements in mice.
Journal of virology 1996;70(9):6450-4.
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1996: Coffin J M
Retrovirus restriction revealed.
Nature 1996;382(6594):762-3.
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1996: Coffin J M
The scoop on HIV mutations.
Journal of the International Association of Physicians in AIDS Care 1996;2(7):45.
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1995: Reuss F U; Coffin J M
Stimulation of mouse mammary tumor virus superantigen expression by an intragenic enhancer.
Proceedings of the National Academy of Sciences of the United States of America 1995;92(20):9293-7.
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1995: Coffin J M
HIV pathogenesis. Lines drawn in epitope wars.
Nature 1995;375(6532):534-5.
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1995: Coffin J M
HIV population dynamics in vivo: implications for genetic variation, pathogenesis, and therapy.
Science (New York, N.Y.) 1995;267(5197):483-9.
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1994: Cachon-Gonzalez M B; Fenner S; Coffin J M; Moran C; Best S; Stoye J P
Structure and expression of the hairless gene of mice.
Proceedings of the National Academy of Sciences of the United States of America 1994;91(16):7717-21.
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1994: Withers-Ward E S; Kitamura Y; Barnes J P; Coffin J M
Distribution of targets for avian retrovirus DNA integration in vivo.
Genes & development 1994;8(12):1473-87.
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1994: Neumann P E; Frankel W N; Letts V A; Coffin J M; Copp A J; Bernfield M
Multifactorial inheritance of neural tube defects: localization of the major gene and recognition of modifiers in ct mutant mice.
Nature genetics 1994;6(4):357-62.
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1993: Swain A; Coffin J M
Influence of sequences in the long terminal repeat and flanking cell DNA on polyadenylation of retroviral transcripts.
Journal of virology 1993;67(10):6265-9.
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1993: Bowes C; Li T; Frankel W N; Danciger M; Coffin J M; Applebury M L; Farber D B
Localization of a retroviral element within the rd gene coding for the beta subunit of cGMP phosphodiesterase.
Proceedings of the National Academy of Sciences of the United States of America 1993;90(7):2955-9.
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1992: Huang A S; Coffin J M
Virology. How does variation count?
Nature 1992;359(6391):107-8.
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1992: Kitamura Y; Lee Y M; Coffin J M
Nonrandom integration of retroviral DNA in vitro: effect of CpG methylation.
Proceedings of the National Academy of Sciences of the United States of America 1992;89(12):5532-6.
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1992: Beutner U; Frankel W N; Cote M S; Coffin J M; Huber B T
Mls-1 is encoded by the long terminal repeat open reading frame of the mouse mammary tumor provirus Mtv-7.
Proceedings of the National Academy of Sciences of the United States of America 1992;89(12):5432-6.
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1992: Swain A; Coffin J M
Mechanism of transduction by retroviruses.
Science (New York, N.Y.) 1992;255(5046):841-5.
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1992: Coffin J M
Superantigens and endogenous retroviruses: a confluence of puzzles.
Science (New York, N.Y.) 1992;255(5043):411-3.
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1992: Coffin J M
Genetic diversity and evolution of retroviruses.
Current topics in microbiology and immunology 1992;176():143-64.
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1992: Coffin J M
Retroviral DNA integration.
Developments in biological standardization 1992;76():141-51.
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1992: Frankel W N; Lee B K; Stoye J P; Coffin J M; Eicher E M
Characterization of the endogenous nonecotropic murine leukemia viruses of NZB/B1NJ and SM/J inbred strains.
Mammalian genome : official journal of the International Mammalian Genome Society 1992;2(2):110-22.
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1991: Lamont C; Culp P; Talbott R L; Phillips T R; Trauger R J; Frankel W N; Wilson M C; Coffin J M; Elder J H
Characterization of endogenous and recombinant proviral elements of a highly tumorigenic AKR cell line.
Journal of virology 1991;65(9):4619-28.
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1991: Lee Y M; Coffin J M
Relationship of avian retrovirus DNA synthesis to integration in vitro.
Molecular and cellular biology 1991;11(3):1419-30.
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1991: Stoye J P; Moroni C; Coffin J M
Virological events leading to spontaneous AKR thymomas.
Journal of virology 1991;65(3):1273-85.
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1991: Frankel W N; Rudy C; Coffin J M; Huber B T
Linkage of Mls genes to endogenous mammary tumour viruses of inbred mice.
Nature 1991;349(6309):526-8.
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1990: Lee Y M; Coffin J M
Efficient autointegration of avian retrovirus DNA in vitro.
Journal of virology 1990;64(12):5958-65.
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1990: Gerstein R M; Frankel W N; Hsieh C L; Durdik J M; Rath S; Coffin J M; Nisonoff A; Selsing E
Isotype switching of an immunoglobulin heavy chain transgene occurs by DNA recombination between different chromosomes.
Cell 1990;63(3):537-48.
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1990: Coffin J M; Moore C
Determination of 3' end processing in retroelements.
Trends in genetics : TIG 1990;6(9):276-7.
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1990: Coffin J M
Molecular mechanisms of nucleic acid integration.
Journal of medical virology 1990;31(1):43-9.
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1990: Frankel W N; Stoye J P; Taylor B A; Coffin J M
A linkage map of endogenous murine leukemia proviruses.
Genetics 1990;124(2):221-36.
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1990: Coffin J M
Genetic variation in avian retroviruses.
Developments in biological standardization 1990;72():123-32.
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1990: Coffin J M
The virology of AIDS: 1990.
AIDS (London, England) 1990;4 Suppl 1():S1-8.
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1989: Frankel W N; Stoye J P; Taylor B A; Coffin J M
Genetic identification of endogenous polytropic proviruses by using recombinant inbred mice.
Journal of virology 1989;63(9):3810-21.
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1989: Swain A; Coffin J M
Polyadenylation at correct sites in genome RNA is not required for retrovirus replication or genome encapsidation.
Journal of virology 1989;63(8):3301-6.
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1989: Frankel W N; Stoye J P; Taylor B A; Coffin J M
Genetic analysis of endogenous xenotropic murine leukemia viruses: association with two common mouse mutations and the viral restriction locus Fv-1.
Journal of virology 1989;63(4):1763-74.
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1989: Coffin J M; Stoye J P; Frankel W N
Genetics of endogenous murine leukemia viruses.
Annals of the New York Academy of Sciences 1989;567():39-49.
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1988: Stoye J P; Fenner S; Greenoak G E; Moran C; Coffin J M
Role of endogenous retroviruses as mutagens: the hairless mutation of mice.
Cell 1988;54(3):383-91.
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1988: Leis J; Baltimore D; Bishop J M; Coffin J; Fleissner E; Goff S P; Oroszlan S; Robinson H; Skalka A M; Temin H M
Standardized and simplified nomenclature for proteins common to all retroviruses.
Journal of virology 1988;62(5):1808-9.
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1988: Shih C C; Stoye J P; Coffin J M
Highly preferred targets for retrovirus integration.
Cell 1988;53(4):531-7.
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1988: Stoye J P; Coffin J M
Polymorphism of murine endogenous proviruses revealed by using virus class-specific oligonucleotide probes.
Journal of virology 1988;62(1):168-75.
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1987: Stoye J P; Coffin J M
The four classes of endogenous murine leukemia virus: structural relationships and potential for recombination.
Journal of virology 1987;61(9):2659-69.
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1987: Herman S A; Coffin J M
Efficient packaging of readthrough RNA in ALV: implications for oncogene transduction.
Science (New York, N.Y.) 1987;236(4803):845-8.
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1987: Norton P A; Coffin J M
Characterization of Rous sarcoma virus sequences essential for viral gene expression.
Journal of virology 1987;61(4):1171-9.
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1986: Herman S A; Coffin J M
Differential transcription from the long terminal repeats of integrated avian leukosis virus DNA.
Journal of virology 1986;60(2):497-505.
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1986: Coffin J M
Genetic variation in AIDS viruses.
Cell 1986;46(1):1-4.
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1986: Coffin J; Haase A; Levy J A; Montagnier L; Oroszlan S; Teich N; Temin H; Toyoshima K; Varmus H; Vogt P
What to call the AIDS virus?
Nature 1986;321(6065):10.
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1986: Dorner A J; Coffin J M
Determinants for receptor interaction and cell killing on the avian retrovirus glycoprotein gp85.
Cell 1986;45(3):365-74.
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1986: Coffin J; Haase A; Levy J A; Montagnier L; Oroszlan S; Teich N; Temin H; Toyoshima K; Varmus H; Vogt P
Human immunodeficiency viruses.
Science (New York, N.Y.) 1986;232(4751):697.
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1985: Robinson H L; Jensen L; Coffin J M
Sequences outside of the long terminal repeat determine the lymphomogenic potential of Rous-associated virus type 1.
Journal of virology 1985;55(3):752-9.
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1985: Shank P R; Schatz P J; Jensen L M; Tsichlis P N; Coffin J M; Robinson H L
Sequences in the gag-pol-5'env region of avian leukosis viruses confer the ability to induce osteopetrosis.
Virology 1985;145(1):94-104.
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1985: Voynow S L; Coffin J M
Truncated gag-related proteins are produced by large deletion mutants of Rous sarcoma virus and form virus particles.
Journal of virology 1985;55(1):79-85.
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1985: Voynow S L; Coffin J M
Evolutionary variants of Rous sarcoma virus: large deletion mutants do not result from homologous recombination.
Journal of virology 1985;55(1):67-78.
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1985: Norton P A; Coffin J M
Bacterial beta-galactosidase as a marker of Rous sarcoma virus gene expression and replication.
Molecular and cellular biology 1985;5(2):281-90.
-
1985: Dorner A J; Stoye J P; Coffin J M
Molecular basis of host range variation in avian retroviruses.
Journal of virology 1985;53(1):32-9.
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1984: Thomas C Y; Khiroya R; Schwartz R S; Coffin J M
Role of recombinant ecotropic and polytropic viruses in the development of spontaneous thymic lymphomas in HRS/J mice.
Journal of virology 1984;50(2):397-407.
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1983: Mermer B; Malamy M; Coffin J M
Rous sarcoma virus contains sequences which permit expression of the gag gene in Escherichia coli.
Molecular and cellular biology 1983;3(10):1746-58.
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1983: Datta S K; Thomas C Y; Nicklas J A; Coffin J M
Thymic epithelial genotype influences the production of recombinant leukemogenic retroviruses in mice.
Journal of virology 1983;47(1):33-45.
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1983: Coffin J M; Tsichlis P N; Conklin K F; Senior A; Robinson H L
Genomes of endogenous and exogenous avian retroviruses.
Virology 1983;126(1):51-72.
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1983: Robinson H L; Coffin J M; Tsichlis P N; Shank P R; Schatz P; Jensen L
Cancer induction by insertional mutagenesis: the role of viral genes in avian leukosis virus induced cancers.
Progress in clinical and biological research 1983;119():37-42.
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1982: Thomas C Y; Coffin J M
Genetic alterations of RNA leukemia viruses associated with the development of spontaneous thymic leukemia in AKR/J mice.
Journal of virology 1982;43(2):416-26.
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1982: Conklin K F; Coffin J M; Robinson H L; Groudine M; Eisenman R
Role of methylation in the induced and spontaneous expression of the avian endogenous virus ev-1: DNA structure and gene products.
Molecular and cellular biology 1982;2(6):638-52.
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1982: Robinson H L; Blais B M; Tsichlis P N; Coffin J M
At least two regions of the viral genome determine the oncogenic potential of avian leukosis viruses.
Proceedings of the National Academy of Sciences of the United States of America 1982;79(4):1225-9.
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1981: Coffin J M; Varmus H E; Bishop J M; Essex M; Hardy W D; Martin G S; Rosenberg N E; Scolnick E M; Weinberg R A; Vogt P K
Proposal for naming host cell-derived inserts in retrovirus genomes.
Journal of virology 1981;40(3):953-7.
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1981: Coffin J M; Tsichlis P N; Robinson H L
Genetics of leukemogenesis by avian leukosis viruses.
Haematology and blood transfusion 1981;26():432-8.
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1980: Green N; Hiai H; Elder J H; Schwartz R S; Khiroya R H; Thomas C Y; Tsichlis P N; Coffin J M
Expression of leukemogenic recombinant viruses associated with a recessive gene in HRS/J mice.
The Journal of experimental medicine 1980;152(2):249-64.
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1980: Tsichlis P N; Coffin J M
Recombinants between endogenous and exogenous avian tumor viruses: role of the C region and other portions of the genome in the control of replication and transformation.
Journal of virology 1980;33(1):238-49.
-
1980: Tsichlis P N; Conklin K F; Coffin J M
Mutant and recombinant avian retroviruses with extended host range.
Proceedings of the National Academy of Sciences of the United States of America 1980;77(1):536-40.
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1980: Coffin J M; Tsichlis P N; Barker C S; Voynow S; Robinson H L
Variation in avian retrovirus genomes.
Annals of the New York Academy of Sciences 1980;354():410-25.
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1980: Robinson H L; Pearson M N; DeSimone D W; Tsichlis P N; Coffin J M
Subgroup-E avian-leukosis-virus-associated disease in chickens.
Cold Spring Harbor symposia on quantitative biology 1980;44 Pt 2,():1133-41.
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1980: Tsichlis P N; Coffin J M
Role of the C region in relative growth rates of endogenous and exogenous avian oncoviruses.
Cold Spring Harbor symposia on quantitative biology 1980;44 Pt 2,():1123-32.
-
1979: Tsichlis P N; Coffin J M
Recombination between the defective component of an acute leukemia virus and Rous associated virus O, an endogenous virus of chickens.
Proceedings of the National Academy of Sciences of the United States of America 1979;76(6):3001-5.
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1979: Haseltine W A; Coffin J M; Hageman T C
Structure of products of the Moloney murine leukemia virus endogenous DNA polymerase reaction.
Journal of virology 1979;30(1):375-83.
-
1979: Coffin J M
Structure, replication, and recombination of retrovirus genomes: some unifying hypotheses.
The Journal of general virology 1979;42(1):1-26.
-
1979: Haseltine W A; Coffin J M
In vitro studies of the replication of Moloney murine leukemia virus.
Cold Spring Harbor symposia on quantitative biology 1979;43 Pt 2():841-9.
-
1978: Coffin J M; Champion M; Chabot F
Nucleotide sequence relationships between the genomes of an endogenous and an exogenous avian tumor virus.
Journal of virology 1978;28(3):972-91.
-
1978: Coffin J M; Hageman T C; Maxam A M; Haseltine W A
Structure of the genome of Moloney murine leukemia virus: a terminally redundant sequence.
Cell 1978;13(4):761-73.
-
1978: Shih T Y; Weeks M O; Troxler D H; Coffin J M; Scolnick E M
Mapping host range-specific oligonucleotides within genomes of the ecotropic and mink cell focus-inducing strains of Moloney murine leukemia virus.
Journal of virology 1978;26(1):71-83.
-
1978: Shih T Y; Young H A; Coffin J M; Scolnick E M
Physical map of the Kirsten sarcoma virus genome as determined by fingerprinting RNase T1-resistant oligonucleotides.
Journal of virology 1978;25(1):238-52.
-
1977: Coffin J M; Haseltine W A
Nucleotide sequence of Rous sarcoma virus RNA at the initiation site of DNA synthesis: The 102nd nucleotide is U.
Journal of molecular biology 1977;117(3):805-14.
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1977: Clewley J P; Bishop D H; Kang C Y; Coffin J; Schnitzlein W M; Reichmann M E; Shope R E
Oligonucleotide fingerprints of RNA species obtained from rhabdoviruses belonging to the vesicular stomatitis virus subgroup.
Journal of virology 1977;23(1):152-66.
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1977: Pettersson R F; Hewlett M J; Baltimore D; Coffin J M
The genome of Uukuniemi virus consists of three unique RNA segments.
Cell 1977;11(1):51-63.
-
1977: Coffin J M; Haseltine W A
Terminal redundancy and the origin of replication of Rous sarcoma virus RNA.
Proceedings of the National Academy of Sciences of the United States of America 1977;74(5):1908-12.
-
1976: Coffin J M
Genes responsible for transformation by avian RNA tumor viruses.
Cancer research 1976;36(11 Pt. 2):4282-8.
-
1976: Humphries E H; Coffin J M
Rate of virus-specific RNA synthesis in synchronized chicken embryo fibroblasts infected with avian leukosis virus.
Journal of virology 1976;17(2):393-401.
-
1976: Billeter M A; Coffin J M; Joho R; Weissmann C
Mapping of the genome of Prague Rous sarcoma virus B.
Annales de microbiologie 1976;127A(1):5-6.
-
1976: Coffin J M; Billeter M A
A physical map of the Rous sarcoma virus genome.
Journal of molecular biology 1976;100(3):293-318.
-
1974: Billeter M A; Parsons J T; Coffin J M
The nucleotide sequence complexity of avian tumor virus RNA.
Proceedings of the National Academy of Sciences of the United States of America 1974;71(9):3560-4.
-
1974: Rymo L; Parsons J T; Coffin J M; Weissmann C
In vitro synthesis of Rous sarcoma virus-specific RNA is catalyzed by a DNA-dependent RNA polymerase.
Proceedings of the National Academy of Sciences of the United States of America 1974;71(7):2782-6.
-
1974: Coffin J M; Parsons J T; Rymo L; Haroz R K; Weissmann C
A new approach to the isolation of RNA-DNA hybrids and its application to the quantitative determination of labeled tumor virus RNA.
Journal of molecular biology 1974;86(2):373-96.
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1973: Parsons J T; Coffin J M; Haroz R K; Bromley P A; Weissmann C
Quantitative determination and location of newly synthesized virus-specific ribonucleic acid in chicken cells infected with Rous sarcoma virus.
Journal of virology 1973;11(5):761-74.
-
1972: Coffin J M
Rescue of rous sarcoma virus from rous sarcoma virus-transformed mammalian cells.
Journal of virology 1972;10(1):153-6.
-
1972: Coffin J M; Temin H M
Hybridization of Rous sarcoma virus deoxyribonucleic acid polymerase product and ribonucleic acids from chicken and rat cells infected with Rous sarcoma virus.
Journal of virology 1972;9(5):766-75.
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1971: Coffin J M; Temin H M
Ribonuclease-sensitive deoxyribonucleic acid polymerase activity in uninfected rat cells and rat cells infected with Rous sarcoma virus.
Journal of virology 1971;8(5):630-42.
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1971: Coffin J M; Temin H M
Comparison of Rous sarcoma virus-specific deoxyribonucleic acid polymerases in virions of Rous sarcoma virus and in Rous sarcoma virus-infected chicken cells.
Journal of virology 1971;7(5):625-34.
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