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John Collins

Research Profile

Anatomy

Chromosomes, Human, Pair 22

Devices

Yeast Artificial Chromosomes

Procedures

Genes & Molecular Sequences

Chemicals & Drugs

Concepts & Ideas

Molecular Sequence Data

Occupations

Phenomena

Nucleic Acid Hybridization

Living Beings

Mouse

Co-author Network

Publications

TOP 3
John E Collins; Stephen M J Searle; Simon White; Derek L Stemple
Incorporating RNA-seq data into the zebrafish Ensembl genebuild.
Lira Mamanova; Robert M Andrews; Keith D James; Elizabeth M Sheridan; Peter D Ellis; Cordelia F Langford; Tobias W B Ost; John E Collins; Daniel J Turner
FRT-seq: amplification-free, strand-specific transcriptome sequencing.
Charlotte G Cole; Owen T McCann; John E Collins; Karen Oliver; David Willey; Susan M Gribble; Fengtang Yang; Karen McLaren; Jane Rogers; Zemin Ning; David M Beare; Carl Bruder
Finishing the finished human chromosome 22 sequence.

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All Publications

2012: John E Collins; Stephen M J Searle; Simon White; Derek L Stemple
Incorporating RNA-seq data into the zebrafish Ensembl genebuild.
Genome research 2012;22(10):2067-78.
2010: Lira Mamanova; Robert M Andrews; Keith D James; Elizabeth M Sheridan; Peter D Ellis; Cordelia F Langford; Tobias W B Ost; John E Collins; Daniel J Turner
FRT-seq: amplification-free, strand-specific transcriptome sequencing.
Nature methods 2010;7(2):130-2.
2008: Charlotte G Cole; Owen T McCann; John E Collins; Karen Oliver; David Willey; Susan M Gribble; Fengtang Yang; Karen McLaren; Jane Rogers; Zemin Ning; David M Beare; Carl Bruder
Finishing the finished human chromosome 22 sequence.
Genome biology 2008;9(5):R78.
2008: John E Collins
Subcellular localization of intracellular human proteins by construction of tagged fusion proteins and transient expression in COS-7 Cells.
Methods in molecular biology (Clifton, N.J.) 2008;439():353-67.
2004: Kathryn Woodfine; Heike Fiegler; David M Beare; John E Collins; Owen T McCann; Bryan D Young; Silvana Debernardi; Richard Mott; Carl Bruder; Nigel P Carter
Replication timing of the human genome.
Human molecular genetics 2004;13(2):191-202.
2004: John E Collins; Charmain L Wright; Carol A Edwards; Matthew P Davis; James A Grinham; Charlotte G Cole; Melanie E Goward; Begoña Aguado; Meera Mallya; Younes Mokrab; Elizabeth J Huckle; David M Beare; Carl Bruder
A genome annotation-driven approach to cloning the human ORFeome.
Genome biology 2004;5(10):R84.
2003: Carl Bruder; David M Beare; John E Collins
The characteristics of human genes: analysis of human chromosome 22.
Comparative and functional genomics 2003;4(6):635-46.
2003: Jennifer L Ashurst; John E Collins
Gene annotation: prediction and testing.
Annual review of genomics and human genetics 2003;4():69-88.
2003: John E Collins; Melanie E Goward; Charlotte G Cole; Luc J Smink; Elizabeth J Huckle; Sarah Knowles; Jacqueline M Bye; David M Beare; Carl Bruder
Reevaluating human gene annotation: a second-generation analysis of chromosome 22.
Genome research 2003;13(1):27-36.
1999: Carl Bruder; N Shimizu; B A Roe; S Chissoe; A R Hunt; John E Collins; R Bruskiewich; David M Beare; Michele Clamp; Luc J Smink; R Ainscough; J P Almeida; A Babbage; C Bagguley; J Bailey; K Barlow; Kirsty Bates; O Beasley; Christine P Bird; S Blakey; A M Bridgeman; D Buck; J Burgess; W D Burrill; K P O'Brien
The DNA sequence of human chromosome 22.
Nature 1999;402(6761):489-95.
1997: John E Collins; Andrew Mungall; K L Badcock; J M Fay; Carl Bruder
The organization of the gamma-glutamyl transferase genes and other low copy repeats in human chromosome 22q11.
Genome research 1997;7(5):522-31.
1996: C G Cole; John E Collins; Carl Bruder
YAC library screening. II. Hybridization and PCR-based screening protocols.
Methods in molecular biology (Clifton, N.J.) 1996;54():33-47.
1996: C G Cole; John E Collins; Carl Bruder
YAC library screening. I. Preparation of hybridization filters and PCRpools.
Methods in molecular biology (Clifton, N.J.) 1996;54():23-31.
1996: John E Collins; S Hassock; Carl Bruder
YAC library storage and transport.
Methods in molecular biology (Clifton, N.J.) 1996;54():13-21.
1995: John E Collins; C G Cole; L J Smink; C L Garrett; MA Leversha; CA Soderlund; G L Maslen; L A Everett; K M Rice; A J Coffey
A high-density YAC contig map of human chromosome 22.
Nature 1995;377(6547 Suppl):367-79.
1992: John E Collins; L A Everett; David R Bentley; Carl Bruder
A panel of human chromosome 22-specific sequence tagged sites.
Genomics 1992;14(4):1098-103.