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Roger Cooke

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Daniele Canzio; Yifan Cheng; Roger Cooke; Jennifer F Garcia; Adam Larson; Maofu Liao; Hiten D Madhani; Diana B Marina; Nariman Naber; Edward Pate; Peter Schuck; Shenping Wu; Geeta J Narlikar
A conformational switch in HP1 releases auto-inhibition to drive heterochromatin assembly.
Timothy D Harrington; Adam G Larson; Nariman Naber; Roger Cooke; Sarah E Rice; Edward Pate
Analysis of the interaction of the Eg5 Loop5 with the nucleotide site.
Nariman Naber; Roger Cooke; Edward Pate
Slow myosin ATP turnover in the super-relaxed state in tarantula muscle.

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All Publications

2013: Daniele Canzio; Yifan Cheng; Roger Cooke; Jennifer F Garcia; Adam Larson; Maofu Liao; Hiten D Madhani; Diana B Marina; Nariman Naber; Edward Pate; Peter Schuck; Shenping Wu; Geeta J Narlikar
A conformational switch in HP1 releases auto-inhibition to drive heterochromatin assembly.
Nature 2013;496(7445):377-81.
2011: Timothy D Harrington; Adam G Larson; Nariman Naber; Roger Cooke; Sarah E Rice; Edward Pate
Analysis of the interaction of the Eg5 Loop5 with the nucleotide site.
Journal of theoretical biology 2011;289():107-15.
2011: Nariman Naber; Roger Cooke; Edward Pate
Slow myosin ATP turnover in the super-relaxed state in tarantula muscle.
Journal of molecular biology 2011;411(5):943-50.
2011: Thomas J Purcell; Shirley Sutton; Roger Cooke; Nariman Naber; Edward Pate
EPR spectra and molecular dynamics agree that the nucleotide pocket of myosin V is closed and that it opens on binding actin.
Journal of molecular biology 2011;411(1):16-26.
2011: Nariman Naber; Adam Larson; Sarah Rice; Roger Cooke; Edward Pate
Multiple conformations of the nucleotide site of Kinesin family motors in the triphosphate state.
Journal of molecular biology 2011;408(4):628-42.
2011: Thomas J Purcell; Nariman Naber; Kathleen Franks-Skiba; Alexander R Dunn; Catherine C Eldred; Christopher L Berger; András Málnási-Csizmadia; James A Spudich; Douglas M Swank; Edward Pate; Roger Cooke
Nucleotide pocket thermodynamics measured by EPR reveal how energy partitioning relates myosin speed to efficiency.
Journal of molecular biology 2011;407(1):79-91.
2010: Nariman Naber; András Málnási-Csizmadia; Thomas J Purcell; Roger Cooke; Edward Pate
Combining EPR with fluorescence spectroscopy to monitor conformational changes at the myosin nucleotide pocket.
Journal of molecular biology 2010;396(4):937-48.
2010: Melanie A Stewart; Kathleen Franks-Skiba; Susan Chen; Roger Cooke
Myosin ATP turnover rate is a mechanism involved in thermogenesis in resting skeletal muscle fibers.
Proceedings of the National Academy of Sciences of the United States of America 2010;107(1):430-5.
2009: Lisa R Racki; Janet G Yang; Nariman Naber; Peretz D Partensky; Ashley Acevedo; Thomas J Purcell; Roger Cooke; Yifan Cheng; Geeta J Narlikar
The chromatin remodeller ACF acts as a dimeric motor to space nucleosomes.
Nature 2009;462(7276):1016-21.
2009: David Hyatt; Roger Cooke; Edward Pate
Analysis of the interaction of the nucleotide base with myosin and the effect on substrate efficacy.
Biophysical journal 2009;97(7):1952-60.
2009: Melanie Stewart; Kathleen Franks-Skiba; Roger Cooke
Myosin regulatory light chain phosphorylation inhibits shortening velocities of skeletal muscle fibers in the presence of the myosin inhibitor blebbistatin.
Journal of muscle research and cell motility 2009;30(1-2):17-27.
2008: Christina Karatzaferi; Kathleen Franks-Skiba; Roger Cooke
Inhibition of shortening velocity of skinned skeletal muscle fibers in conditions that mimic fatigue.
American journal of physiology. Regulatory, integrative and comparative physiology 2008;294(3):R948-55.
2007: Roger Cooke
Modulation of the actomyosin interaction during fatigue of skeletal muscle.
Muscle & nerve 2007;36(6):756-77.
2007: Kathleen Franks-Skiba; Rea Lardelli; Germaine Goh; Roger Cooke
Myosin light chain phosphorylation inhibits muscle fiber shortening velocity in the presence of vanadate.
American journal of physiology. Regulatory, integrative and comparative physiology 2007;292(4):R1603-12.
2007: Nariman Naber; Thomas J Purcell; Edward Pate; Roger Cooke
Dynamics of the nucleotide pocket of myosin measured by spin-labeled nucleotides.
Biophysical journal 2007;92(1):172-84.
2006: Todd J Minehardt; Peter A Kollman; Roger Cooke; Edward Pate
The open nucleotide pocket of the profilin/actin x-ray structure is unstable and closes in the absence of profilin.
Biophysical journal 2006;90(7):2445-9.
2005: Maia V Vinogradova; Deborah B Stone; Galina G Malanina; Christina Karatzaferi; Roger Cooke; Robert A Mendelson; Robert J Fletterick
Ca(2+)-regulated structural changes in troponin.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(14):5038-43.
2005: Roger Cooke; Vincenzo Lombardi
The XXXIII European Muscle Conference: ELBA Sept. 04.
Journal of muscle research and cell motility 2005;26(2-3):167-72.
2004: Christina Karatzaferi; Marc K Chinn; Roger Cooke
The force exerted by a muscle cross-bridge depends directly on the strength of the actomyosin bond.
Biophysical journal 2004;87(4):2532-44.
2004: Roger Cooke
The sliding filament model: 1972-2004.
The Journal of general physiology 2004;123(6):643-56.
2004: Motomasa Tanaka; Peter Chien; Nariman Naber; Roger Cooke; Jonathan S Weissman
Conformational variations in an infectious protein determine prion strain differences.
Nature 2004;428(6980):323-8.
2003: Nariman Naber; Todd J Minehardt; Sarah Rice; Xiaoru Chen; Jean Grammer; Marija Matuska; Ronald D Vale; Peter A Kollman; Roberto Car; Ralph G Yount; Roger Cooke; Edward Pate
Closing of the nucleotide pocket of kinesin-family motors upon binding to microtubules.
Science (New York, N.Y.) 2003;300(5620):798-801.
2003: Nariman Naber; Sarah Rice; Marija Matuska; Ronald D Vale; Roger Cooke; Edward Pate
EPR spectroscopy shows a microtubule-dependent conformational change in the kinesin switch 1 domain.
Biophysical journal 2003;84(5):3190-6.
2003: Christina Karatzaferi; Kathryn H Myburgh; Marc K Chinn; Kathleen Franks-Skiba; Roger Cooke
Effect of an ADP analog on isometric force and ATPase activity of active muscle fibers.
American journal of physiology. Cell physiology 2003;284(4):C816-25.
2003: Sarah Rice; Y Cui; C Sindelar; Nariman Naber; Marija Matuska; Ronald D Vale; Roger Cooke
Thermodynamic properties of the kinesin neck-region docking to the catalytic core.
Biophysical journal 2003;84(3):1844-54.
2003: Marc K Chinn; Elise Burmeister Getz; Roger Cooke; Steven L Lehman
Force enhancement by PEG during ramp stretches of skeletal muscle.
Journal of muscle research and cell motility 2003;24(8):571-8.
2002: Roger Cooke
Do longer oars row farther?
Molecular cell 2002;10(5):966-7.
2002: Charles V Sindelar; Mary Jane Budny; Sarah Rice; Nariman Naber; Robert J Fletterick; Roger Cooke
Two conformations in the human kinesin power stroke defined by X-ray crystallography and EPR spectroscopy.
Nature structural biology 2002;9(11):844-8.
2002: Tania Chakrabarty; Ming Xiao; Roger Cooke; Paul R Selvin
Holding two heads together: stability of the myosin II rod measured by resonance energy transfer between the heads.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(9):6011-6.
2002: Xiaoru Chen; Jean Grammer; J David Lawson; Roger Cooke; Edward Pate; Ralph G Yount
A novel restricted photoaffinity spin-labeled non-nucleoside ATP analogue as a covalently attached reporter group of the active site of Myosin subfragment 1.
Biochemistry 2002;41(8):2609-20.
2002: Todd J Minehardt; Nicola Marzari; Roger Cooke; Edward Pate; Peter A Kollman; Roberto Car
A classical and ab initio study of the interaction of the myosin triphosphate binding domain with ATP.
Biophysical journal 2002;82(2):660-75.
2001: Todd J Minehardt; Roger Cooke; Edward Pate; Peter A Kollman
Molecular dynamics study of the energetic, mechanistic, and structural implications of a closed phosphate tube in ncd.
Biophysical journal 2001;80(3):1151-68.
2000: Xiaoru Chen; Jean Grammer; Roger Cooke; Edward Pate; Ralph G Yount
Synthesis and characterization of novel spin-labeled photoaffinity nonnucleoside analogues of ATP as structural and EPR probes for myosin.
Bioconjugate chemistry 2000;11(5):725-33.
2000: J Mizushima; Y Kawasaki; T Tabohashi; T Kitano; K Sakamoto; M Kawashima; Roger Cooke; Howard I Maibach
Effect of surfactants on human stratum corneum: electron paramagnetic resonance study.
International journal of pharmaceutics 2000;197(1-2):193-202.
2000: KS Thorn; Nariman Naber; Marija Matuska; Ronald D Vale; Roger Cooke
A novel method of affinity-purifying proteins using a bis-arsenical fluorescein.
Protein science : a publication of the Protein Society 2000;9(2):213-7.
2000: Marc K Chinn; Kathryn H Myburgh; T Pham; Kathleen Franks-Skiba; Roger Cooke
The effect of polyethylene glycol on the mechanics and ATPase activity of active muscle fibers.
Biophysical journal 2000;78(2):927-39.
1999: Sarah Rice; A W Lin; D Safer; CL Hart; Nariman Naber; Bridget Carragher; S M Cain; E Pechatnikova; Elizabeth M Wilson-Kubalek; M Whittaker; Edward Pate; Roger Cooke; EW Taylor; Ronald A Milligan; Ronald D Vale
A structural change in the kinesin motor protein that drives motility.
Nature 1999;402(6763):778-84.
1999: D Wang; Y Luo; Roger Cooke; Jean Grammer; Edward Pate; Ralph G Yount
Synthesis of a spin-labeled photoaffinity ATP analogue, and its use to specifically photolabel myosin cross-bridges in skeletal muscle fibers.
Journal of muscle research and cell motility 1999;20(8):743-53.
1999: Roger Cooke
Myosin structure: does the tail wag the dog?
Current biology : CB 1999;9(20):R773-5.
1999: Elise Burmeister Getz; M Xiao; Tania Chakrabarty; Roger Cooke; Paul R Selvin
A comparison between the sulfhydryl reductants tris(2-carboxyethyl)phosphine and dithiothreitol for use in protein biochemistry.
Analytical biochemistry 1999;273(1):73-80.
1999: J Gollub; C R Cremo; Roger Cooke
Phosphorylation regulates the ADP-induced rotation of the light chain domain of smooth muscle myosin.
Biochemistry 1999;38(31):10107-18.
1998: M Xiao; H Li; G E Snyder; Roger Cooke; R G Yount; Paul R Selvin
Conformational changes between the active-site and regulatory light chain of myosin as determined by luminescence resonance energy transfer: the effect of nucleotides and actin.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(26):15309-14.
1998: Elise Burmeister Getz; Roger Cooke; S L Lehman
Phase transition in force during ramp stretches of skeletal muscle.
Biophysical journal 1998;75(6):2971-83.
1998: E Burmeister Getz; Roger Cooke; P R Selvin
Luminescence resonance energy transfer measurements in myosin.
Biophysical journal 1998;74(5):2451-8.
1998: Roger Cooke
New angle on myosin.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(6):2720-2.
1998: Stefan Highsmith; K Duignan; K Franks-Skiba; Katherine Polosukhina; Roger Cooke
Reversible inactivation of myosin subfragment 1 activity by mechanical immobilization.
Biophysical journal 1998;74(3):1465-72.
1998: Edward Pate; K Franks-Skiba; Roger Cooke
Depletion of phosphate in active muscle fibers probes actomyosin states within the powerstroke.
Biophysical journal 1998;74(1):369-80.
1997: Edward Pate; Nariman Naber; Marija Matuska; K Franks-Skiba; Roger Cooke
Opening of the myosin nucleotide triphosphate binding domain during the ATPase cycle.
Biochemistry 1997;36(40):12155-66.
1997: G J Wilson; S E Shull; N I Naber; Roger Cooke
Myosin head interactions in Ca2+-activated skinned rabbit skeletal muscle fibers.
Journal of biochemistry 1997;122(3):563-71.
1997: Nariman Naber; Roger Cooke; Edward Pate
Binding of ncd to microtubules induces a conformational change near the junction of the motor domain with the neck.
Biochemistry 1997;36(32):9681-9.
1997: Roger Cooke
Actomyosin interaction in striated muscle.
Physiological reviews 1997;77(3):671-97.
1997: Kathryn H Myburgh; Roger Cooke
Response of compressed skinned skeletal muscle fibers to conditions that simulate fatigue.
Journal of applied physiology (Bethesda, Md. : 1985) 1997;82(4):1297-304.
1997: Giovanni Cuda; E Pate; Roger Cooke; James R Sellers
In vitro actin filament sliding velocities produced by mixtures of different types of myosin.
Biophysical journal 1997;72(4):1767-79.
1996: J Gollub; C R Cremo; Roger Cooke
ADP release produces a rotation of the neck region of smooth myosin but not skeletal myosin.
Nature structural biology 1996;3(9):796-802.
1996: L Zhao; J Gollub; Roger Cooke
Orientation of paramagnetic probes attached to gizzard regulatory light chain bound to myosin heads in rabbit skeletal muscle.
Biochemistry 1996;35(31):10158-65.
1996: Stefan Highsmith; K Duignan; Roger Cooke; J Cohen
Osmotic pressure probe of actin-myosin hydration changes during ATP hydrolysis.
Biophysical journal 1996;70(6):2830-7.
1996: E P Sablin; F J Kull; Roger Cooke; Ronald D Vale; Robert J Fletterick
Crystal structure of the motor domain of the kinesin-related motor ncd.
Nature 1996;380(6574):555-9.
1995: K H Myburgh; K Franks-Skiba; Roger Cooke
Nucleotide turnover rate measured in fully relaxed rabbit skeletal muscle myofibrils.
The Journal of general physiology 1995;106(5):957-73.
1995: Nariman Naber; M Matuska; E P Sablin; Edward Pate; Roger Cooke
A novel adenosine triphosphate analog with a heavy atom to target the nucleotide binding site of proteins.
Protein science : a publication of the Protein Society 1995;4(9):1824-31.
1995: L Zhao; Edward Pate; Anthony J Baker; Roger Cooke
The myosin catalytic domain does not rotate during the working power stroke.
Biophysical journal 1995;69(3):994-9.
1995: Edward Pate; M Bhimani; K Franks-Skiba; Roger Cooke
Reduced effect of pH on skinned rabbit psoas muscle mechanics at high temperatures: implications for fatigue.
The Journal of physiology 1995;486 ( Pt 3)():689-94.
1995: Roger Cooke
The actomyosin engine.
FASEB journal : official publication of the Federation of American Societies for Experimental Biology 1995;9(8):636-42.
1995: L Zhao; Nariman Naber; Roger Cooke
Muscle cross-bridges bound to actin are disordered in the presence of 2,3-butanedione monoxime.
Biophysical journal 1995;68(5):1980-90.
1995: K Franks-Skiba; Roger Cooke
The conformation of the active site of myosin probed using mant-nucleotides.
Biophysical journal 1995;68(4 Suppl):142S-147S; discussion 147S-149S.
1995: Y Luo; D Wang; C R Cremo; Edward Pate; Roger Cooke; Ralph G Yount
Photoaffinity ADP analogs as covalently attached reporter groups of the active site of myosin subfragment 1.
Biochemistry 1995;34(6):1978-87.
1995: G J Wilson; S E Shull; Roger Cooke
Inhibition of muscle force by vanadate.
Biophysical journal 1995;68(1):216-26.
1994: Y Luo; Roger Cooke; Edward Pate
Effect of series elasticity on delay in development of tension relative to stiffness during muscle activation.
The American journal of physiology 1994;267(6 Pt 1):C1598-606.
1994: K Franks-Skiba; T Hwang; Roger Cooke
Quenching of fluorescent nucleotides bound to myosin: a probe of the active-site conformation.
Biochemistry 1994;33(42):12720-8.
1994: Edward Pate; G J Wilson; M Bhimani; Roger Cooke
Temperature dependence of the inhibitory effects of orthovanadate on shortening velocity in fast skeletal muscle.
Biophysical journal 1994;66(5):1554-62.
1994: Nariman Naber; Roger Cooke
Mobility and orientation of spin probes attached to nucleotides incorporated into actin.
Biochemistry 1994;33(13):3855-61.
1994: C W Carreras; Nariman Naber; Roger Cooke; Daniel V Santi
A C-terminal conformational equilibrium in thymidylate synthase observed by electron paramagnetic resonance spectroscopy.
Biochemistry 1994;33(8):2071-7.
1994: Roger Cooke; H White; Edward Pate
A model of the release of myosin heads from actin in rapidly contracting muscle fibers.
Biophysical journal 1994;66(3 Pt 1):778-88.
1994: Nariman Naber; Michael Lorenz; Roger Cooke
The orientation of spin-probes attached to Cys374 on actin in oriented gels.
Journal of molecular biology 1994;236(3):703-9.
1993: Nariman Naber; E M Ostap; D D Thomas; Roger Cooke
Orientation and rotational dynamics of spin-labeled phalloidin bound to actin in muscle fibers.
Proteins 1993;17(4):347-54.
1993: D Wang; Edward Pate; Roger Cooke; Ralph G Yount
Synthesis of non-nucleotide ATP analogues and characterization of their chemomechanical interaction with muscle fibres.
Journal of muscle research and cell motility 1993;14(5):484-97.
1993: Roger Cooke
The structure of a molecular motor.
Current biology : CB 1993;3(9):590-2.
1993: Y Luo; Roger Cooke; Edward Pate
A model of stress relaxation in cross-bridge systems: effect of a series elastic element.
The American journal of physiology 1993;265(1 Pt 1):C279-88.
1993: Edward Pate; K Franks-Skiba; H White; Roger Cooke
The use of differing nucleotides to investigate cross-bridge kinetics.
The Journal of biological chemistry 1993;268(14):10046-53.
1993: E Pate; H White; Roger Cooke
Determination of the myosin step size from mechanical and kinetic data.
Proceedings of the National Academy of Sciences of the United States of America 1993;90(6):2451-5.
1992: Brett D Hambly; K Franks; Roger Cooke
Paramagnetic probes attached to a light chain on the myosin head are highly disordered in active muscle fibers.
Biophysical journal 1992;63(5):1306-13.
1992: Edward Pate; M Lin; K Franks-Skiba; Roger Cooke
Contraction of glycerinated rabbit slow-twitch muscle fibers as a function of MgATP concentration.
The American journal of physiology 1992;262(4 Pt 1):C1039-46.
1991: Edward Pate; Roger Cooke
Simulation of stochastic processes in motile crossbridge systems.
Journal of muscle research and cell motility 1991;12(4):376-93.
1991: Edward Pate; K L Nakamaye; K Franks-Skiba; Ralph G Yount; Roger Cooke
Mechanics of glycerinated muscle fibers using nonnucleoside triphosphate substrates.
Biophysical journal 1991;59(3):598-605.
1991: Brett D Hambly; K Franks; Roger Cooke
Orientation of spin-labeled light chain-2 exchanged onto myosin cross-bridges in glycerinated muscle fibers.
Biophysical journal 1991;59(1):127-38.
1990: Roger Cooke
Force generation in muscle.
Current opinion in cell biology 1990;2(1):62-6.
1989: Edward Pate; Roger Cooke
A model of crossbridge action: the effects of ATP, ADP and Pi.
Journal of muscle research and cell motility 1989;10(3):181-96.
1989: Edward Pate; Roger Cooke
Addition of phosphate to active muscle fibers probes actomyosin states within the powerstroke.
Pflügers Archiv : European journal of physiology 1989;414(1):73-81.
1989: Roger Cooke
Structure of the myosin head.
Cell motility and the cytoskeleton 1989;14(2):183-6.
1988: Edward Pate; Roger Cooke
Energetics of the actomyosin bond in the filament array of muscle fibers.
Biophysical journal 1988;53(4):561-73.
1988: Roger Cooke; K Franks; G B Luciani; Edward Pate
The inhibition of rabbit skeletal muscle contraction by hydrogen ions and phosphate.
The Journal of physiology 1988;395():77-97.
1988: Roger Cooke; Edward Pate
The effects of pyrophosphate on myosin heads and on fiber stiffness.
Advances in experimental medicine and biology 1988;226():255-65.
1987: M S Crowder; Roger Cooke
Orientation of spin-labeled nucleotides bound to myosin in glycerinated muscle fibers.
Biophysical journal 1987;51(2):323-33.
1985: Roger Cooke; E Pate
The effects of ADP and phosphate on the contraction of muscle fibers.
Biophysical journal 1985;48(5):789-98.
1985: A Persechini; J T Stull; Roger Cooke
The effect of myosin phosphorylation on the contractile properties of skinned rabbit skeletal muscle fibers.
The Journal of biological chemistry 1985;260(13):7951-4.
1984: C G Dos Remedios; Roger Cooke
Fluorescence energy transfer between probes on actin and probes on myosin.
Biochimica et biophysica acta 1984;788(2):193-205.
1984: K Franks; Roger Cooke; J T Stull
Myosin phosphorylation decreases the ATPase activity of cardiac myofibrils.
Journal of molecular and cellular cardiology 1984;16(7):597-604.
1984: M S Crowder; Roger Cooke
The effect of myosin sulphydryl modification on the mechanics of fibre contraction.
Journal of muscle research and cell motility 1984;5(2):131-46.
1983: John Edward Heuser; Roger Cooke
Actin-myosin interactions visualized by the quick-freeze, deep-etch replica technique.
Journal of molecular biology 1983;169(1):97-122.
1983: D D Thomas; Roger Cooke; V A Barnett
Orientation and rotational mobility of spin-labelled myosin heads in insect flight muscle in rigor.
Journal of muscle research and cell motility 1983;4(3):367-78.
1982: Roger Cooke; K Franks; J T Stull
Myosin phosphorylation regulates the ATPase activity of permeable skeletal muscle fibers.
FEBS letters 1982;144(1):33-7.
1981: Roger Cooke
Stress does not alter the conformation of a domain of the myosin cross-bridge in rigor muscle fibres.
Nature 1981;294(5841):570-1.
1980: D D Thomas; Roger Cooke
Orientation of spin-labeled myosin heads in glycerinated muscle fibers.
Biophysical journal 1980;32(3):891-906.
1980: J T Stull; D K Blumenthal; Roger Cooke
Regulation of contraction by myosin phosphorylation. A comparison between smooth and skeletal muscles.
Biochemical pharmacology 1980;29(19):2537-43.
1980: J S Sobel; Roger Cooke; R A Pedersen
Distribution of actin and myosin in mouse trophoblast: correlation with changes in invasiveness during development in vitro.
Developmental biology 1980;78(2):365-79.
1980: Roger Cooke; K Franks
All myosin heads form bonds with actin in rigor rabbit skeletal muscle.
Biochemistry 1980;19(10):2265-9.
1980: C J Ritz-Gold; Roger Cooke; D K Blumenthal; J T Stull
Light chain phosphorylation alters the conformation of skeletal muscle myosin.
Biochemical and biophysical research communications 1980;93(1):209-14.
1980: S Srivastava; Roger Cooke; J Wikman-Coffelt
Studies on the role of myosin light chain-LC2 in tension generation.
Biochemical and biophysical research communications 1980;92(1):1-7.