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Xinping Cui

Research Profile

Devices

Oligonucleotide Array Sequence Analysis

Genes & Molecular Sequences

Procedures

Physiology

Gene Expression Regulation, Plant

Chemicals & Drugs

Living Beings

Disorders

Genetic Markers

Concepts & Ideas

Anatomy

Plant Chromosomes

Co-author Network

Publications

TOP 3
Paul M Ruegger; Elizabeth Bent; Jonathan Braun; Xinping Cui; Daniel R Jeske; Tao Jiang; Wei Li; James Borneman
Improving oligonucleotide fingerprinting of rRNA genes by implementation of polony microarray technology.
Laura L Presley; Bennett Roth; Paul M Ruegger; Jingxiao Ye; Zhanpan Zhang; Jeff Allard; Jonathan Braun; Xinping Cui; David Elashoff; Lee Goodglick; Andrew Ippoliti; Daniel R Jeske; James Leblanc; Xiaoxiao Li; Dermot McGovern; James Borneman
Host-microbe relationships in inflammatory bowel disease detected by bacterial and metaproteomic analysis of the mucosal-luminal interface.
Kevin Stoffel; Xiaoping Tan; María José Truco; Hamid Ashrafi; David Caldwell; Xinping Cui; Theresa Hill; Alexander Kozik; Richard W Michelmore; Sebastian Reyes-Chin-Wo; Hans van Leeuwen; Allen Van Deynze
Development and application of a 6.5 million feature Affymetrix Genechip® for massively parallel discovery of single position polymorphisms in lettuce (Lactuca spp.).

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All Publications

2012: Paul M Ruegger; Elizabeth Bent; Jonathan Braun; Xinping Cui; Daniel R Jeske; Tao Jiang; Wei Li; James Borneman
Improving oligonucleotide fingerprinting of rRNA genes by implementation of polony microarray technology.
Journal of microbiological methods 2012;90(3):235-40.
2012: Laura L Presley; Bennett Roth; Paul M Ruegger; Jingxiao Ye; Zhanpan Zhang; Jeff Allard; Jonathan Braun; Xinping Cui; David Elashoff; Lee Goodglick; Andrew Ippoliti; Daniel R Jeske; James Leblanc; Xiaoxiao Li; Dermot McGovern; James Borneman
Host-microbe relationships in inflammatory bowel disease detected by bacterial and metaproteomic analysis of the mucosal-luminal interface.
Inflammatory bowel diseases 2012;18(3):409-17.
2012: Kevin Stoffel; Xiaoping Tan; María José Truco; Hamid Ashrafi; David Caldwell; Xinping Cui; Theresa Hill; Alexander Kozik; Richard W Michelmore; Sebastian Reyes-Chin-Wo; Hans van Leeuwen; Allen Van Deynze
Development and application of a 6.5 million feature Affymetrix Genechip® for massively parallel discovery of single position polymorphisms in lettuce (Lactuca spp.).
BMC genomics 2012;13():185.
2010: Bushi Wang; Xinping Cui
Consonant closed likelihood ratio test procedures with application to dose-response study.
Statistics in medicine 2010;29(25):2617-30.
2010: Xinping Cui; Na You; Thomas Girke; Richard W Michelmore; Allen Van Deynze
Single feature polymorphism detection using recombinant inbred line microarray expression data.
Bioinformatics (Oxford, England) 2010;26(16):1983-9.
2010: Zhonghai Ren; Zhimin Zheng; Viswanathan Chinnusamy; Jianhua Zhu; Xinping Cui; Kei Iida; Jian-Kang Zhu
RAS1, a quantitative trait locus for salt tolerance and ABA sensitivity in Arabidopsis.
Proceedings of the National Academy of Sciences of the United States of America 2010;107(12):5669-74.
2010: Xinping Cui; Haibing Zhao; Jason Wilson
Optimized ranking and selection methods for feature selection with application in microarray experiments.
Journal of biopharmaceutical statistics 2010;20(2):223-39.
2009: Xin-Jian He; Yi-Feng Hsu; Shihua Zhu; Hai-Liang Liu; Olga Pontes; Jianhua Zhu; Xinping Cui; Co-Shine Wang; Jian-Kang Zhu
A conserved transcriptional regulator is required for RNA-directed DNA methylation and plant development.
Genes & development 2009;23(23):2717-22.
2009: Harkamal Walia; Clyde Wilson; Abdelbagi M Ismail; Timothy J Close; Xinping Cui
Comparing genomic expression patterns across plant species reveals highly diverged transcriptional dynamics in response to salt stress.
BMC genomics 2009;10():398.
2009: Sung-Hyun Kim; Prasanna R Bhat; Xinping Cui; Harkamal Walia; Jin Xu; Steve I Wanamaker; Abdelbagi M Ismail; Clyde Wilson; Timothy J Close
Detection and validation of single feature polymorphisms using RNA expression data from a rice genome array.
BMC plant biology 2009;9():65.
2008: Xinping Cui; Jason Wilson
On the probability of correct selection for large k populations, with application to microarray data.
Biometrical journal. Biometrische Zeitschrift 2008;50(5):870-83.
2008: Sayan Das; Prasanna R Bhat; Chinta Sudhakar; Jeffrey D Ehlers; Steve Wanamaker; Philip A Roberts; Xinping Cui; Timothy J Close
Detection and validation of single feature polymorphisms in cowpea (Vigna unguiculata L. Walp) using a soybean genome array.
BMC genomics 2008;9():107.
2007: Louisa A Kempema; Xinping Cui; Frances M Holzer; Linda L Walling
Arabidopsis transcriptome changes in response to phloem-feeding silverleaf whitefly nymphs. Similarities and distinctions in responses to aphids.
Plant physiology 2007;143(2):849-65.
2007: Prasanna R Bhat; Adam Lukaszewski; Xinping Cui; Jin Xu; Jan T Svensson; Steve I Wanamaker; J Giles Waines; Timothy J Close
Mapping translocation breakpoints using a wheat microarray.
Nucleic acids research 2007;35(9):2936-43.
2007: Harkamal Walia; Clyde Wilson; Pascal Condamine; Abdelbagi M Ismail; Jin Xu; Xinping Cui; Timothy J Close
Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise.
BMC genomics 2007;8():87.
2006: Harkamal Walia; Clyde Wilson; Abdul Wahid; Pascal Condamine; Xinping Cui; Timothy J Close
Expression analysis of barley (Hordeum vulgare L.) during salinity stress.
Functional & integrative genomics 2006;6(2):143-56.
2005: Xinping Cui; Jin Xu; Rehana Asghar; Pascal Condamine; Jan T Svensson; Steve I Wanamaker; Nils Stein; Mikeal L Roose; Timothy J Close
Detecting single-feature polymorphisms using oligonucleotide arrays and robustified projection pursuit.
Bioinformatics (Oxford, England) 2005;21(20):3852-8.
2005: Harkamal Walia; Clyde Wilson; Pascal Condamine; Xuan Liu; Abdelbagi M Ismail; Linghe Zeng; Steve I Wanamaker; Jayati Mandal; Jin Xu; Xinping Cui; Timothy J Close
Comparative transcriptional profiling of two contrasting rice genotypes under salinity stress during the vegetative growth stage.
Plant physiology 2005;139(2):822-35.
2004: Tomoshi Tsuchiya; Joseph M Dhahbi; Xinping Cui; Patricia L Mote; Andrzej Bartke; Stephen R Spindler
Additive regulation of hepatic gene expression by dwarfism and caloric restriction.
Physiological genomics 2004;17(3):307-15.