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Ross Dalbey

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Escherichia coli

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Lu Zhu; Abdul Wasey; Stephen H White; Ross E Dalbey
Charge composition features of model single-span membrane proteins that determine selection of YidC and SecYEG translocase pathways in Escherichia coli.
Lu Zhu; Christian Klenner; Andreas Kuhn; Ross E Dalbey
Both YidC and SecYEG are required for translocation of the periplasmic loops 1 and 2 of the multispanning membrane protein TatC.
Ross E Dalbey; Andreas Kuhn
Protein traffic in Gram-negative bacteria--how exported and secreted proteins find their way.

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All Publications

2013: Lu Zhu; Abdul Wasey; Stephen H White; Ross E Dalbey
Charge composition features of model single-span membrane proteins that determine selection of YidC and SecYEG translocase pathways in Escherichia coli.
The Journal of biological chemistry 2013;288(11):7704-16.
2012: Lu Zhu; Christian Klenner; Andreas Kuhn; Ross E Dalbey
Both YidC and SecYEG are required for translocation of the periplasmic loops 1 and 2 of the multispanning membrane protein TatC.
Journal of molecular biology 2012;424(5):354-67.
2012: Ross E Dalbey; Andreas Kuhn
Protein traffic in Gram-negative bacteria--how exported and secreted proteins find their way.
FEMS microbiology reviews 2012;36(6):1023-45.
2012: Ross E Dalbey; Peng Wang; Jan Maarten van Dijl
Membrane proteases in the bacterial protein secretion and quality control pathway.
Microbiology and molecular biology reviews : MMBR 2012;76(2):311-30.
2011: Ross E Dalbey; Peng Wang; Andreas Kuhn
Assembly of bacterial inner membrane proteins.
Annual review of biochemistry 2011;80():161-87.
2011: Peng Wang; Ross E Dalbey
Inserting membrane proteins: the YidC/Oxa1/Alb3 machinery in bacteria, mitochondria, and chloroplasts.
Biochimica et biophysica acta 2011;1808(3):866-75.
2011: Natalie Stiegler; Ross E Dalbey; Andreas Kuhn
M13 procoat protein insertion into YidC and SecYEG proteoliposomes and liposomes.
Journal of molecular biology 2011;406(3):362-70.
2010: Peng Wang; Andreas Kuhn; Ross E Dalbey
Global change of gene expression and cell physiology in YidC-depleted Escherichia coli.
Journal of bacteriology 2010;192(8):2193-209.
2010: Jijun Yuan; Ross E Dalbey; Andreas Kuhn
Membrane protein insertion in E. coli.
Methods in molecular biology (Clifton, N.J.) 2010;619():63-77.
2010: Peng Wang; Ross E Dalbey
In vitro and in vivo approaches to studying the bacterial signal peptide processing.
Methods in molecular biology (Clifton, N.J.) 2010;619():21-37.
2010: Jijun Yuan; Jessica C Zweers; Jan Maarten van Dijl; Ross E Dalbey
Protein transport across and into cell membranes in bacteria and archaea.
Cellular and molecular life sciences : CMLS 2010;67(2):179-99.
2009: Ozlem Dogan Ekici; Jinge Zhu; Ivy Yeuk Wah Chung; Mark Paetzel; Ross E Dalbey; Dehua Pei
Profiling the substrate specificity of viral protease VP4 by a FRET-based peptide library approach.
Biochemistry 2009;48(24):5753-9.
2008: Christian Klenner; Jijun Yuan; Ross E Dalbey; Andreas Kuhn
The Pf3 coat protein contacts TM1 and TM3 of YidC during membrane biogenesis.
FEBS letters 2008;582(29):3967-72.
2008: Ozlem Dogan Ekici; Mark Paetzel; Ross E Dalbey
Unconventional serine proteases: variations on the catalytic Ser/His/Asp triad configuration.
Protein science : a publication of the Protein Society 2008;17(12):2023-37.
2008: Peng Wang; Eunjung Shim; Benjamin Cravatt; Richard Jacobsen; Joe Schoeniger; Apollos C Kim; Mark Paetzel; Ross E Dalbey
Escherichia coli signal peptide peptidase A is a serine-lysine protease with a lysine recruited to the nonconserved amino-terminal domain in the S49 protease family.
Biochemistry 2008;47(24):6361-9.
2008: Yuxia Dong; Sara R Palmer; Adnan Hasona; Shushi Nagamori; H Ronald Kaback; Ross E Dalbey; L Jeannine Brady
Functional overlap but lack of complete cross-complementation of Streptococcus mutans and Escherichia coli YidC orthologs.
Journal of bacteriology 2008;190(7):2458-69.
2008: Kun Xie; Ross E Dalbey
Inserting proteins into the bacterial cytoplasmic membrane using the Sec and YidC translocases.
Nature reviews. Microbiology 2008;6(3):234-44.
2008: Nil Celebi; Ross E Dalbey; Jijun Yuan
Mechanism and hydrophobic forces driving membrane protein insertion of subunit II of cytochrome bo 3 oxidase.
Journal of molecular biology 2008;375(5):1282-92.
2007: Kun Xie; Tara Hessa; Susanna Seppälä; Mikaela Rapp; Gunnar von Heijne; Ross E Dalbey
Features of transmembrane segments that promote the lateral release from the translocase into the lipid phase.
Biochemistry 2007;46(51):15153-61.
2007: Jijun Yuan; Gregory J Phillips; Ross E Dalbey
Isolation of cold-sensitive yidC mutants provides insights into the substrate profile of the YidC insertase and the importance of transmembrane 3 in YidC function.
Journal of bacteriology 2007;189(24):8961-72.
2007: Ozlem Dogan Ekici; Andrew Karla; Mark Paetzel; Mark Lively; Dehua Pei; Ross E Dalbey
Altered -3 substrate specificity of Escherichia coli signal peptidase 1 mutants as revealed by screening a combinatorial peptide library.
The Journal of biological chemistry 2007;282(1):417-25.
2006: Kun Xie; Dorothee Kiefer; Gisela Nagler; Ross E Dalbey; Andreas Kuhn
Different regions of the nonconserved large periplasmic domain of Escherichia coli YidC are involved in the SecF interaction and membrane insertase activity.
Biochemistry 2006;45(44):13401-8.
2006: Nil Celebi; Liang Yi; Sandra J Facey; Andreas Kuhn; Ross E Dalbey
Membrane biogenesis of subunit II of cytochrome bo oxidase: contrasting requirements for insertion of N-terminal and C-terminal domains.
Journal of molecular biology 2006;357(5):1428-36.
2005: Minyong Chen; Kun Xie; Jijun Yuan; Liang Yi; Sandra J Facey; Nathalie Pradel; Long-Fei Wu; Andreas Kuhn; Ross E Dalbey
Involvement of SecDF and YidC in the membrane insertion of M13 procoat mutants.
Biochemistry 2005;44(31):10741-9.
2005: Andrew Karla; Mark Lively; Mark Paetzel; Ross E Dalbey
The identification of residues that control signal peptidase cleavage fidelity and substrate specificity.
The Journal of biological chemistry 2005;280(8):6731-41.
2005: Liang Yi; Ross E Dalbey
Oxa1/Alb3/YidC system for insertion of membrane proteins in mitochondria, chloroplasts and bacteria (review).
Molecular membrane biology 2005;22(1-2):101-11.
2004: Ross E Dalbey; Minyong Chen
Sec-translocase mediated membrane protein biogenesis.
Biochimica et biophysica acta 2004;1694(1-3):37-53.
2004: Liang Yi; Nil Celebi; Minyong Chen; Ross E Dalbey
Sec/SRP requirements and energetics of membrane insertion of subunits a, b, and c of the Escherichia coli F1F0 ATP synthase.
The Journal of biological chemistry 2004;279(38):39260-7.
2004: Ross E Dalbey; Andreas Kuhn
YidC family members are involved in the membrane insertion, lateral integration, folding, and assembly of membrane proteins.
The Journal of cell biology 2004;166(6):769-74.
2004: Mark Paetzel; Jonathon J Goodall; Malgosia Kania; Ross E Dalbey; Malcolm G P Page
Crystallographic and biophysical analysis of a bacterial signal peptidase in complex with a lipopeptide-based inhibitor.
The Journal of biological chemistry 2004;279(29):30781-90.
2004: Fabien Gérard; Nathalie Pradel; Changyun Ye; Bérengère Ize; Liang Yi; Jianguo Xu; Ross E Dalbey; Long-Fei Wu
Putative membrane assembly of EtpM-colicin V chimeras.
Biochimie 2004;86(4-5):283-6.
2004: Justyna Serek; Gabriele Bauer-Manz; Gabriele Struhalla; Lambertus van den Berg; Dorothee Kiefer; Ross E Dalbey; Andreas Kuhn
Escherichia coli YidC is a membrane insertase for Sec-independent proteins.
The EMBO journal 2004;23(2):294-301.
2003: Fenglei Jiang; Minyong Chen; Liang Yi; Jan-Willem de Gier; Andreas Kuhn; Ross E Dalbey
Defining the regions of Escherichia coli YidC that contribute to activity.
The Journal of biological chemistry 2003;278(49):48965-72.
2003: Andreas Kuhn; Rosemary Stuart; Ralph Henry; Ross E Dalbey
The Alb3/Oxa1/YidC protein family: membrane-localized chaperones facilitating membrane protein insertion?
Trends in cell biology 2003;13(10):510-6.
2003: Liang Yi; Fenglei Jiang; Minyong Chen; Brian Cain; Albert Bolhuis; Ross E Dalbey
YidC is strictly required for membrane insertion of subunits a and c of the F(1)F(0)ATP synthase and SecE of the SecYEG translocase.
Biochemistry 2003;42(35):10537-44.
2003: Minyong Chen; Kun Xie; Nico Nouwen; Arnold J M Driessen; Ross E Dalbey
Conditional lethal mutations separate the M13 procoat and Pf3 coat functions of YidC: different YIDC structural requirements for membrane protein insertion.
The Journal of biological chemistry 2003;278(26):23295-300.
2003: Linda Fröderberg; Edith N G Houben; James C Samuelson; Minyong Chen; Sei-Kyoung Park; Gregory J Phillips; Ross E Dalbey; Joen Luirink; Jan-Willem de Gier
Versatility of inner membrane protein biogenesis in Escherichia coli.
Molecular microbiology 2003;47(4):1015-27.
2002: Mark Paetzel; Andrew Karla; Natalie C J Strynadka; Ross E Dalbey
Signal peptidases.
Chemical reviews 2002;102(12):4549-80.
2002: Minyong Chen; Kun Xie; Fenglei Jiang; Liang Yi; Ross E Dalbey
YidC, a newly defined evolutionarily conserved protein, mediates membrane protein assembly in bacteria.
Biological chemistry 2002;383(10):1565-72.
2002: Fenglei Jiang; Liang Yi; Misty Moore; Minyong Chen; Thomas Rohl; Klaas J van Wijk; Jan-Willem de Gier; Ralph Henry; Ross E Dalbey
Chloroplast YidC homolog Albino3 can functionally complement the bacterial YidC depletion strain and promote membrane insertion of both bacterial and chloroplast thylakoid proteins.
The Journal of biological chemistry 2002;277(22):19281-8.
2002: Sei-Kyoung Park; Fenglei Jiang; Ross E Dalbey; Gregory J Phillips
Functional analysis of the signal recognition particle in Escherichia coli by characterization of a temperature-sensitive ffh mutant.
Journal of bacteriology 2002;184(10):2642-53.
2002: Mark Paetzel; Ross E Dalbey; Natalie C J Strynadka
Crystal structure of a bacterial signal peptidase apoenzyme: implications for signal peptide binding and the Ser-Lys dyad mechanism.
The Journal of biological chemistry 2002;277(11):9512-9.
2002: Minyong Chen; James C Samuelson; Fenglei Jiang; Matthias Muller; Andreas Kuhn; Ross E Dalbey
Direct interaction of YidC with the Sec-independent Pf3 coat protein during its membrane protein insertion.
The Journal of biological chemistry 2002;277(10):7670-5.
2001: James C Samuelson; Fenglei Jiang; Liang Yi; Minyong Chen; Jan-Willem de Gier; Andreas Kuhn; Ross E Dalbey
Function of YidC for the insertion of M13 procoat protein in Escherichia coli: translocation of mutants that show differences in their membrane potential dependence and Sec requirement.
The Journal of biological chemistry 2001;276(37):34847-52.
2001: Els van den Brink-van der Laan; Ross E Dalbey; Rudy A Demel; J Antoinette Killian; Ben de Kruijff
Effect of nonbilayer lipids on membrane binding and insertion of the catalytic domain of leader peptidase.
Biochemistry 2001;40(32):9677-84.
2001: Malene L Urbanus; Pier A Scotti; L Froderberg; A Saaf; Jan-Willem de Gier; Josef Brunner; J C Samuelson; Ross E Dalbey; Bauke Oudega; Joen Luirink
Sec-dependent membrane protein insertion: sequential interaction of nascent FtsQ with SecY and YidC.
EMBO reports 2001;2(6):524-9.
2000: JL Carlos; Mark Paetzel; G Brubaker; Andrew Karla; C M Ashwell; Mark Lively; G Cao; P Bullinger; Ross E Dalbey
The role of the membrane-spanning domain of type I signal peptidases in substrate cleavage site selection.
The Journal of biological chemistry 2000;275(49):38813-22.
2000: James C Samuelson; Minyong Chen; Fenglei Jiang; I Möller; M Wiedmann; Andreas Kuhn; Gregory J Phillips; Ross E Dalbey
YidC mediates membrane protein insertion in bacteria.
Nature 2000;406(6796):637-41.
2000: Ross E Dalbey; Minyong Chen; Fenglei Jiang; James C Samuelson
Understanding the insertion of transporters and other membrane proteins.
Current opinion in cell biology 2000;12(4):435-42.
2000: Mark Paetzel; Ross E Dalbey; Natalie C J Strynadka
The structure and mechanism of bacterial type I signal peptidases. A novel antibiotic target.
Pharmacology & therapeutics 2000;87(1):27-49.
2000: JL Carlos; P A Klenotic; Mark Paetzel; Natalie C J Strynadka; Ross E Dalbey
Mutational evidence of transition state stabilization by serine 88 in Escherichia coli type I signal peptidase.
Biochemistry 2000;39(24):7276-83.
2000: P A Klenotic; JL Carlos; James C Samuelson; T A Schuenemann; William Tschantz; Mark Paetzel; Natalie C J Strynadka; Ross E Dalbey
The role of the conserved box E residues in the active site of the Escherichia coli type I signal peptidase.
The Journal of biological chemistry 2000;275(9):6490-8.
2000: Ross E Dalbey; A Kuhn
Evolutionarily related insertion pathways of bacterial, mitochondrial, and thylakoid membrane proteins.
Annual review of cell and developmental biology 2000;16():51-87.
1999: T A Schuenemann; V M Delgado-Nixon; Ross E Dalbey
Direct evidence that the proton motive force inhibits membrane translocation of positively charged residues within membrane proteins.
The Journal of biological chemistry 1999;274(11):6855-64.
1999: Ross E Dalbey; C Robinson
Protein translocation into and across the bacterial plasma membrane and the plant thylakoid membrane.
Trends in biochemical sciences 1999;24(1):17-22.
1998: Mark Paetzel; Ross E Dalbey; Natalie C J Strynadka
Crystal structure of a bacterial signal peptidase in complex with a beta-lactam inhibitor.
Nature 1998;396(6707):186-90.
1998: W van Klompenburg; Mark Paetzel; J M de Jong; Ross E Dalbey; Rudy A Demel; G von Heijne; Ben de Kruijff
Phosphatidylethanolamine mediates insertion of the catalytic domain of leader peptidase in membranes.
FEBS letters 1998;431(1):75-9.
1998: V M Delgado-Partin; Ross E Dalbey
The proton motive force, acting on acidic residues, promotes translocation of amino-terminal domains of membrane proteins when the hydrophobicity of the translocation signal is low.
The Journal of biological chemistry 1998;273(16):9927-34.
1997: Ross E Dalbey; Mark Lively; S Bron; J M van Dijl
The chemistry and enzymology of the type I signal peptidases.
Protein science : a publication of the Protein Society 1997;6(6):1129-38.
1997: Dorothee Kiefer; X Hu; Ross E Dalbey; Andreas Kuhn
Negatively charged amino acid residues play an active role in orienting the Sec-independent Pf3 coat protein in the Escherichia coli inner membrane.
The EMBO journal 1997;16(9):2197-204.
1997: Mark Paetzel; Natalie C J Strynadka; William Tschantz; R Casareno; P R Bullinger; Ross E Dalbey
Use of site-directed chemical modification to study an essential lysine in Escherichia coli leader peptidase.
The Journal of biological chemistry 1997;272(15):9994-10003.
1997: Mark Paetzel; Ross E Dalbey
Catalytic hydroxyl/amine dyads within serine proteases.
Trends in biochemical sciences 1997;22(1):28-31.
1995: Ross E Dalbey; A Kuhn; G von Heijne
Directionality in protein translocation across membranes: the N-tail phenomenon.
Trends in cell biology 1995;5(10):380-3.
1995: Mark Paetzel; M Chernaia; Natalie C J Strynadka; W Tschantz; G Cao; Ross E Dalbey; M N James
Crystallization of a soluble, catalytically active form of Escherichia coli leader peptidase.
Proteins 1995;23(1):122-5.
1995: William Tschantz; Mark Paetzel; G Cao; dominic suciu; Masayori Inouye; Ross E Dalbey
Characterization of a soluble, catalytically active form of Escherichia coli leader peptidase: requirement of detergent or phospholipid for optimal activity.
Biochemistry 1995;34(12):3935-41.
1995: G Cao; A Kuhn; Ross E Dalbey
The translocation of negatively charged residues across the membrane is driven by the electrochemical potential: evidence for an electrophoresis-like membrane transfer mechanism.
The EMBO journal 1995;14(5):866-75.
1995: S Chatterjee; dominic suciu; Ross E Dalbey; P C Kahn; Masayori Inouye
Determination of Km and kcat for signal peptidase I using a full length secretory precursor, pro-OmpA-nuclease A.
Journal of molecular biology 1995;245(4):311-4.
1994: A Kuhn; D Kiefer; C Köhne; H Y Zhu; William Tschantz; Ross E Dalbey
Evidence for a loop-like insertion mechanism of pro-Omp A into the inner membrane of Escherichia coli.
European journal of biochemistry / FEBS 1994;226(3):891-7.
1994: G Cao; Shi-Yuan Cheng; P Whitley; G von Heijne; A Kuhn; Ross E Dalbey
Synergistic insertion of two hydrophobic regions drives Sec-independent membrane protein assembly.
The Journal of biological chemistry 1994;269(43):26898-903.
1994: G Cao; Ross E Dalbey
Translocation of N-terminal tails across the plasma membrane.
The EMBO journal 1994;13(19):4662-9.
1994: William Tschantz; Ross E Dalbey
Bacterial leader peptidase 1.
Methods in enzymology 1994;244():285-301.
1993: William Tschantz; M Sung; V M Delgado-Partin; Ross E Dalbey
A serine and a lysine residue implicated in the catalytic mechanism of the Escherichia coli leader peptidase.
The Journal of biological chemistry 1993;268(36):27349-54.
1993: B Geller; H Y Zhu; Shi-Yuan Cheng; A Kuhn; Ross E Dalbey
Charged residues render pro-OmpA potential dependent for initiation of membrane translocation.
The Journal of biological chemistry 1993;268(13):9442-7.
1992: Ross E Dalbey; G Von Heijne
Signal peptidases in prokaryotes and eukaryotes--a new protease family.
Trends in biochemical sciences 1992;17(11):474-8.
1992: M Sung; Ross E Dalbey
Identification of potential active-site residues in the Escherichia coli leader peptidase.
The Journal of biological chemistry 1992;267(19):13154-9.
1992: J I Lee; A Kuhn; Ross E Dalbey
Distinct domains of an oligotopic membrane protein are Sec-dependent and Sec-independent for membrane insertion.
The Journal of biological chemistry 1992;267(2):938-43.
1991: L M Shen; J I Lee; Shi-Yuan Cheng; H Jutte; A Kuhn; Ross E Dalbey
Use of site-directed mutagenesis to define the limits of sequence variation tolerated for processing of the M13 procoat protein by the Escherichia coli leader peptidase.
Biochemistry 1991;30(51):11775-81.
1991: Ross E Dalbey
Leader peptidase.
Molecular microbiology 1991;5(12):2855-60.
1991: Ross E Dalbey
In vivo protein translocation into or across the bacterial plasma membrane.
Methods in cell biology 1991;34():39-60.
1990: N Bilgin; J I Lee; H Y Zhu; Ross E Dalbey; G von Heijne
Mapping of catalytically important domains in Escherichia coli leader peptidase.
The EMBO journal 1990;9(9):2717-22.
1990: A Kuhn; H Y Zhu; Ross E Dalbey
Efficient translocation of positively charged residues of M13 procoat protein across the membrane excludes electrophoresis as the primary force for membrane insertion.
The EMBO journal 1990;9(8):2385-9.
1990: Ross E Dalbey
Positively charged residues are important determinants of membrane protein topology.
Trends in biochemical sciences 1990;15(7):253-7.
1989: H Y Zhu; Ross E Dalbey
Both a short hydrophobic domain and a carboxyl-terminal hydrophilic region are important for signal function in the Escherichia coli leader peptidase.
The Journal of biological chemistry 1989;264(20):11833-8.
1989: J K Laws; Ross E Dalbey
Positive charges in the cytoplasmic domain of Escherichia coli leader peptidase prevent an apolar domain from functioning as a signal.
The EMBO journal 1989;8(7):2095-9.