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Willem de Vos

Research Profile

Genes & Molecular Sequences

Anatomy

Living Beings

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Chemicals & Drugs

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Physiology

Gene Expression Regulation, Bacterial

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Oligonucleotide Array Sequence Analysis

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Jenni Lappi; Hannu M Mykkänen; Kaisa S Poutanen; Jarkko Salojärvi; Willem M de Vos; Marjukka Kolehmainen; Anne Salonen
Intake of whole-grain and fiber-rich rye bread versus refined wheat bread does not differentiate intestinal microbiota composition in finnish adults with metabolic syndrome.
Prachi Tripathi; Jos Vanderleyden; Ingemar von Ossowski; Vincent Dupres; Sarah Lebeer; Airi Palva; David Alsteens; Audrey Beaussart; Ingmar Claes; Willem M de Vos; Yves F Dufrêne
Adhesion and Nanomechanics of Pili from the Probiotic Lactobacillus rhamnosus GG.
Max Nieuwdorp; Anne Vrieze; Willem M de Vos
Reply to Konstantinov and Peppelenbosch.

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2013: Jenni Lappi; Hannu M Mykkänen; Kaisa S Poutanen; Jarkko Salojärvi; Willem M de Vos; Marjukka Kolehmainen; Anne Salonen
Intake of whole-grain and fiber-rich rye bread versus refined wheat bread does not differentiate intestinal microbiota composition in finnish adults with metabolic syndrome.
The Journal of nutrition 2013;143(5):648-55.
2013: Prachi Tripathi; Jos Vanderleyden; Ingemar von Ossowski; Vincent Dupres; Sarah Lebeer; Airi Palva; David Alsteens; Audrey Beaussart; Ingmar Claes; Willem M de Vos; Yves F Dufrêne
Adhesion and Nanomechanics of Pili from the Probiotic Lactobacillus rhamnosus GG.
ACS nano 2013;7(4):3685-97.
2013: Max Nieuwdorp; Anne Vrieze; Willem M de Vos
Reply to Konstantinov and Peppelenbosch.
Gastroenterology 2013;144(4):e20-1.
2013: Sebastian Tims; Robert Vlietinck; Willem M de Vos; Catherine Derom; Daisy M Jonkers; Michiel Kleerebezem; Wim H Saris; Erwin G Zoetendal
Microbiota conservation and BMI signatures in adult monozygotic twins.
The ISME journal 2013;7(4):707-17.
2013: François P Douillard; Hanna M Järvinen; Ravi Kant; Pia K Laine; Airi Palva; Lars Paulin; Taija E Pietilä; Cinzia L Randazzo; J Reunanen; Angela Ribbera; Seppo Salminen; Reetta Satokari; Ingemar von Ossowski; Cinzia Caggia; Willem M de Vos
Comparative genomic and functional analysis of Lactobacillus casei and Lactobacillus rhamnosus strains marketed as probiotics.
Applied and environmental microbiology 2013;79(6):1923-33.
2013: Els van Nood; Caroline E Visser; Anne Vrieze; Erwin G Zoetendal; Joep F W M Bartelsman; Willem M de Vos; Marcel GW Dijkgraaf; Susana Fuentes; Ed J Kuijper; Max Nieuwdorp; Peter Speelman; Jan G P Tijssen; Josbert J Keller
Duodenal infusion of donor feces for recurrent Clostridium difficile.
The New England journal of medicine 2013;368(5):407-15.
2013: Leo Lahti; Matej Oresic; Airi Palva; Jarkko Salojärvi; Anne Salonen; Jonna Jalanka-Tuovinen; Riina A Kekkonen; Willem M de Vos
Associations between the human intestinal microbiota, Lactobacillus rhamnosus GG and serum lipids indicated by integrated analysis of high-throughput profiling data.
PeerJ 2013;1():e32.
2013: Lotta Nylund; Mirjana Rajilić-Stojanović; Seppo Salminen; Reetta Satokari; Erika Isolauri; Marko Kalliomäki; Janne Nikkilä; Willem M de Vos
Microarray analysis reveals marked intestinal microbiota aberrancy in infants having eczema compared to healthy children in at-risk for atopic disease.
BMC microbiology 2013;13():12.
2013: Jing Cheng; Willem M de Vos; Airi M Palva; Reetta Satokari
Contribution of the intestinal microbiota to human health: from birth to 100 years of age.
Current topics in microbiology and immunology 2013;358():323-46.
2012: Anne Vrieze; Erwin G Zoetendal; Raish Oozeer; Jarkko Salojärvi; Mireille J Serlie; Erik S Stroes; Johan E T van Hylckama Vlieg; Els Van Nood; Mariette T Ackermans; Joep F W M Bartelsman; Vincent Bloks; Geesje M Dallinga-Thie; Willem M de Vos; Muriel Derrien; Anne Druesne; Albert K Groen; Hans G H J Heilig; Joost B L Hoekstra; Frits Holleman; Ruud S Kootte; Max Nieuwdorp
Transfer of intestinal microbiota from lean donors increases insulin sensitivity in individuals with metabolic syndrome.
Gastroenterology 2012;143(4):913-6.e7.
2012: Colin J Ingham; Jurjen ter Maat; Willem M de Vos
Where bio meets nano: the many uses for nanoporous aluminum oxide in biotechnology.
Biotechnology advances 2012;30(5):1089-99.
2012: Willem M de Vos; Elisabeth A J de Vos
Role of the intestinal microbiome in health and disease: from correlation to causation.
Nutrition reviews 2012;70 Suppl 1():S45-56.
2012: Johan F T van Lieshout; Wietse Vroom; Odette N Pérez Gutiérrez; Willem M de Vos; Antoni Planas; John van der Oost; Sotirios Koutsopoulos
Thermal stabilization of an endoglucanase by cyclization.
Applied biochemistry and biotechnology 2012;167(7):2039-53.
2012: Clara Belzer; Willem M de Vos
Microbes inside--from diversity to function: the case of Akkermansia.
The ISME journal 2012;6(8):1449-58.
2012: Erwin G Zoetendal; Manimozhiyan Arumugam; Carien C G M Booijink; Peer Bork; Willem M de Vos; Jeroen Raes; Freddy J Troost; Bartholomeus van den Bogert; Michiel Wels; Michiel Kleerebezem
The human small intestinal microbiota is driven by rapid uptake and conversion of simple carbohydrates.
The ISME journal 2012;6(7):1415-26.
2012: Edze R Westra; Shi Pey Wong; Paul B G van Erp; Sander Bollen; Stan J J Brouns; Remus T Dame; Willem M de Vos; Renko de Vries; Matthijs M Jore; Tim Künne; Christel L C Seegers; Ekaterina Semenova; Konstantin Severinov; Raymond H J Staals; John van der Oost
CRISPR immunity relies on the consecutive binding and degradation of negatively supercoiled invader DNA by Cascade and Cas3.
Molecular cell 2012;46(5):595-605.
2012: Bas M van der Zaan; Willem M de Vos; Alette A M Langenhoff; Caroline M Plugge; Flávia Talarico Saia; Hauke Smidt; Alfons J M Stams; Jan Gerritse
Anaerobic benzene degradation under denitrifying conditions: Peptococcaceae as dominant benzene degraders and evidence for a syntrophic process.
Environmental microbiology 2012;14(5):1171-81.
2012: Jennifer Levering; Mark W J M Musters; Martijn Bekker; Domenico Bellomo; Willem M de Vos; Tomas Fiedler; Jeroen Hugenholtz; Bernd Kreikemeyer; Ursula Kummer; Bas Teusink
Role of phosphate in the central metabolism of two lactic acid bacteria--a comparative systems biology approach.
The FEBS journal 2012;279(7):1274-90.
2012: J Reunanen; Ingemar von Ossowski; Antoni P A Hendrickx; Airi Palva; Willem M de Vos
Characterization of the SpaCBA pilus fibers in the probiotic Lactobacillus rhamnosus GG.
Applied and environmental microbiology 2012;78(7):2337-44.
2012: Johanna Koponen; Kerttu Koskenniemi; Kati Laakso; Tuula A Nyman; Kirsi Savijoki; Soile Tynkkynen; Willem M de Vos; Nisse Kalkkinen; Matti Kankainen; Pekka Varmanen
Effect of acid stress on protein expression and phosphorylation in Lactobacillus rhamnosus GG.
Journal of proteomics 2012;75(4):1357-74.
2012: Noora Ottman; Hauke Smidt; Willem M de Vos; Clara Belzer
The function of our microbiota: who is out there and what do they do?
Frontiers in cellular and infection microbiology 2012;2():104.
2012: Ingrid Hang; Jaana Harmoinen; Anu Kettunen; Teemu Rinttila; Susanna Alaja; Juha H A Apajalahti; Willem M de Vos; Jürgen Zentek; Thomas Spillmann
Effect of high contents of dietary animal-derived protein or carbohydrates on canine faecal microbiota.
BMC veterinary research 2012;8():90.
2012: Tom Groot Kormelink; Yanick Hagemeijer; Eric Koenders; Lex Overmars; Roland Siezen; Willem M de Vos; Christof Francke
Comparative genome analysis of central nitrogen metabolism and its control by GlnR in the class Bacilli.
BMC genomics 2012;13():191.
2012: Ingmar J J Claes; Pascal Courtin; Sigrid C J De Keersmaecker; Willem M de Vos; Pascal Hols; Airi Palva; Krzysztof Regulski; J Reunanen; Thomas Jules Rolain; Geert Schoofs; Jos Vanderleyden; Ingemar von Ossowski; Marie-Pierre Chapot-Chartier; Sarah Lebeer
Genetic and biochemical characterization of the cell wall hydrolase activity of the major secreted protein of Lactobacillus rhamnosus GG.
PloS one 2012;7(2):e31588.
2012: Sarah Lebeer; Kris Nys; Airi Palva; Geert Schoofs; Hanne L P Tytgat; Els J M Van Damme; Patrizia Agostinis; Crina I A Balog; Ingmar J J Claes; Sigrid C J De Keersmaecker; Willem M de Vos; André M Deelder; Tine L A Verhoeven; Ingemar von Ossowski; Manfred Wuhrer; Jos Vanderleyden
The major secreted protein Msp1/p75 is O-glycosylated in Lactobacillus rhamnosus GG.
Microbial cell factories 2012;11():15.
2012: Carolin A Kolmeder; Jaana Mättö; Janne Nikkilä; Airi Palva; Ilja Ritamo; Jarkko Salojärvi; Anne Salonen; Leena Valmu; Mark de Been; Willem M de Vos
Comparative metaproteomics and diversity analysis of human intestinal microbiota testifies for its temporal stability and expression of core functions.
PloS one 2012;7(1):e29913.
2011: Jurjen ter Maat; Carel A G M Weijers; Willem M de Vos; Marcel Giesbers; Colin J Ingham; Remco Regeling; Han Zuilhof
Organic modification and subsequent biofunctionalization of porous anodic alumina using terminal alkynes.
Langmuir : the ACS journal of surfaces and colloids 2011;27(22):13606-17.
2011: Amandine Everard; Patrice François; Myriam Girard; Vladimir Lazarevic; Giulio M Muccioli; Audrey M Neyrinck; Sam Possemiers; Jacques Schrenzel; Ann Van Holle; Giulio G Muccioli; Willem M de Vos; Nathalie M Delzenne; Muriel Derrien; Patrice Cani
Responses of gut microbiota and glucose and lipid metabolism to prebiotics in genetic obese and diet-induced leptin-resistant mice.
Diabetes 2011;60(11):2775-86.
2011: Ger T Rijkers; Lorenzo Morelli; Robert-Jan Brummer; Gerard Corthier; Willem M de Vos; Philippe Marteau
Health benefits and health claims of probiotics: bridging science and marketing.
The British journal of nutrition 2011;106(9):1291-6.
2011: Mirjana Rajilić-Stojanović; Sebastian Tims; Elena Biagi; Hans G H J Heilig; Kajsa Kajander; Riina A Kekkonen; Willem M de Vos
Global and deep molecular analysis of microbiota signatures in fecal samples from patients with irritable bowel syndrome.
Gastroenterology 2011;141(5):1792-801.
2011: Willem M de Vos
Systems solutions by lactic acid bacteria: from paradigms to practice.
Microbial cell factories 2011;10 Suppl 1():S2.
2011: Jacoline Gerritsen; Ger T Rijkers; Hauke Smidt; Willem M de Vos
Intestinal microbiota in human health and disease: the impact of probiotics.
Genes & nutrition 2011;6(3):209-40.
2011: Mary O'Connell-Motherway; Marco Ventura; Aldert L Zomer; José Antonio Moreno Muñoz; Francesca Bottacini; Pat G Casey; Marcus J Claesson; Willem M de Vos; Gerald F Fitzgerald; Kiera Flynn; Desmond G Higgins; Aileen M Houston; Breda Kearney; Sinead Leahy; Frances O'Brien; Caitlin O'Mahony; Paul W O'Toole; Airi Palva; Justus Reunanen; Fergus Shanahan; Douwe van Sinderen
Functional genome analysis of Bifidobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor.
Proceedings of the National Academy of Sciences of the United States of America 2011;108(27):11217-22.
2011: Ingemar von Ossowski; J Reunanen; Reetta Satokari; Jos Vanderleyden; Sigrid C J De Keersmaecker; Willem M de Vos; Sarah Lebeer; Airi Palva
Functional characterization of a mucus-specific LPXTG surface adhesin from probiotic Lactobacillus rhamnosus GG.
Applied and environmental microbiology 2011;77(13):4465-72.
2011: Neslihan Taş; Willem M de Vos; Gosse Schraa; Miriam H A van Eekert; Anke Wagner; Hauke Smidt
Role of "Dehalococcoides" spp. in the anaerobic transformation of hexachlorobenzene in European rivers.
Applied and environmental microbiology 2011;77(13):4437-45.
2011: Ravi Kant; Lars Paulin; Edward Alatalo; Willem M de Vos; Airi Palva
Genome sequence of Lactobacillus amylovorus GRL1118, isolated from pig ileum.
Journal of bacteriology 2011;193(12):3147-8.
2011: Ravi Kant; Mark W J van Passel; Airi Palva; Susan Lucas; Alla Lapidus; Tijana Glavina del Rio; Eileen Dalin; Hope Tice; David Bruce; Lynne Goodwin; Sam Pitluck; Frank W Larimer; Miriam L Land; Loren Hauser; Parveen Sangwan; Willem M de Vos; Peter H Janssen; Hauke Smidt
Genome sequence of Chthoniobacter flavus Ellin428, an aerobic heterotrophic soil bacterium.
Journal of bacteriology 2011;193(11):2902-3.
2011: Ravi Kant; Mark W J van Passel; Parveen Sangwan; Airi Palva; Susan Lucas; Alex Copeland; Alla Lapidus; Tijana Glavina del Rio; Eileen Dalin; Hope Tice; David Bruce; Lynne Goodwin; Sam Pitluck; Olga Chertkov; Frank W Larimer; Miriam L Land; Loren Hauser; Thomas S Brettin; John C Detter; Shunsheng Han; Willem M de Vos; Peter H Janssen; Hauke Smidt
Genome sequence of "Pedosphaera parvula" Ellin514, an aerobic Verrucomicrobial isolate from pasture soil.
Journal of bacteriology 2011;193(11):2900-1.
2011: Michiel Kleerebezem; Willem M de Vos
Lactic acid bacteria: life after genomics.
Microbial biotechnology 2011;4(3):318-22.
2011: Mark W J van Passel; Ravi Kant; Airi Palva; Alex Copeland; Susan Lucas; Alla Lapidus; Tijana Glavina del Rio; Sam Pitluck; Eugene Goltsman; Alicia Clum; Hui Sun; Jeremy Schmutz; Frank W Larimer; Miriam L Land; Loren Hauser; Nikolaos Kyrpides; Natalia Mikhailova; P Paul Richardson; Peter H Janssen; Willem M de Vos; Hauke Smidt
Genome sequence of the verrucomicrobium Opitutus terrae PB90-1, an abundant inhabitant of rice paddy soil ecosystems.
Journal of bacteriology 2011;193(9):2367-8.
2011: Mark W J van Passel; Ravi Kant; Airi Palva; Susan Lucas; Alex Copeland; Alla Lapidus; Tijana Glavina del Rio; Eileen Dalin; Hope Tice; David Bruce; Lynne Goodwin; Sam Pitluck; Karen Walston Davenport; David Sims; Thomas S Brettin; John C Detter; Shunsheng Han; Frank W Larimer; Miriam L Land; Loren Hauser; Nikolaos Kyrpides; Galina Ovchinnikova; P Paul Richardson; Willem M de Vos; Hauke Smidt; Erwin G Zoetendal
Genome sequence of Victivallis vadensis ATCC BAA-548, an anaerobic bacterium from the phylum Lentisphaerae, isolated from the human gastrointestinal tract.
Journal of bacteriology 2011;193(9):2373-4.
2011: Rolf Boesten; Frank H J Schuren; kaouther ben amor; Monique Haarman; Jan Knol; Willem M de Vos
Bifidobacterium population analysis in the infant gut by direct mapping of genomic hybridization patterns: potential for monitoring temporal development and effects of dietary regimens.
Microbial biotechnology 2011;4(3):417-27.
2011: Bartholomeus van den Bogert; Willem M de Vos; Erwin G Zoetendal; Michiel Kleerebezem
Microarray analysis and barcoded pyrosequencing provide consistent microbial profiles depending on the source of human intestinal samples.
Applied and environmental microbiology 2011;77(6):2071-80.
2011: Ravi Kant; Lars Paulin; Edward Alatalo; Willem M de Vos; Airi Palva
Genome sequence of Lactobacillus amylovorus GRL1112.
Journal of bacteriology 2011;193(3):789-90.
2011: Kerttu Koskenniemi; Kati Laakso; Johanna Koponen; Matti Kankainen; Dario Greco; Petri Auvinen; Kirsi Savijoki; Tuula A Nyman; Anu Surakka; Tuomas Salusjärvi; Willem M de Vos; Soile Tynkkynen; Nisse Kalkkinen; Pekka Varmanen
Proteomics and transcriptomics characterization of bile stress response in probiotic Lactobacillus rhamnosus GG.
Molecular & cellular proteomics : MCP 2011;10(2):M110.002741.
2011: Muriel Derrien; Guido Hooiveld; Michael Müller; Elisabeth Norin; Peter van Baarlen; Willem M de Vos
Modulation of Mucosal Immune Response, Tolerance, and Proliferation in Mice Colonized by the Mucin-Degrader Akkermansia muciniphila.
Frontiers in microbiology 2011;2():166.
2011: Jonna Jalanka-Tuovinen; Riina Kekkonen; Leo Lahti; Janne Nikkilä; Airi Palva; Anne Salonen; Outi Immonen; Willem M de Vos
Intestinal microbiota in healthy adults: temporal analysis reveals individual and common core and relation to intestinal symptoms.
PloS one 2011;6(7):e23035.
2011: Filipe Santos; Delphine Saulnier; Jennifer K Spinler; Bas Teusink; James Versalovic; Willem M de Vos; Douwe Molenaar; Jeroen Hugenholtz
Functional identification in Lactobacillus reuteri of a PocR-like transcription factor regulating glycerol utilization and vitamin B12 synthesis.
Microbial cell factories 2011;10():55.
2011: Mark W J van Passel; Ravi Kant; Erwin G Zoetendal; Caroline M Plugge; Muriel Derrien; Stephanie A Malfatti; Patrick S G Chain; Tanja Woyke; Airi Palva; Willem M de Vos; Hauke Smidt
The genome of Akkermansia muciniphila, a dedicated intestinal mucin degrader, and its use in exploring intestinal metagenomes.
PloS one 2011;6(3):e16876.
2011: Koos Rooijers; Carolin Kolmeder; Catherine Juste; Joël Doré; Mark de Been; Sjef Boeren; Pilar Galan; Christian Beauvallet; Willem M de Vos; Peter J Schaap
An iterative workflow for mining the human intestinal metaproteome.
BMC genomics 2011;12():6.
2010: Neslihan Taş; Hans G H J Heilig; Miriam H A van Eekert; Gosse Schraa; Willem M de Vos; Hauke Smidt
Concurrent hexachlorobenzene and chloroethene transformation by endogenous dechlorinating microorganisms in the Ebro River sediment.
FEMS microbiology ecology 2010;74(3):682-92.
2010: Sander Sieuwerts; Douwe Molenaar; Sacha A F T van Hijum; Marke Beerthuyzen; Marc J A Stevens; Patrick W M Janssen; Colin J Ingham; Frank A M de Bok; Willem M de Vos; Johan E T van Hylckama Vlieg
Mixed-culture transcriptome analysis reveals the molecular basis of mixed-culture growth in Streptococcus thermophilus and Lactobacillus bulgaricus.
Applied and environmental microbiology 2010;76(23):7775-84.
2010: Carien C G M Booijink; Sahar El-Aidy; Mirjana Rajilić-Stojanović; Hans G H J Heilig; Freddy J Troost; Hauke Smidt; Michiel Kleerebezem; Willem M de Vos; Erwin G Zoetendal
High temporal and inter-individual variation detected in the human ileal microbiota.
Environmental microbiology 2010;12(12):3213-27.
2010: Lotta Nylund; Hans G H J Heilig; Seppo Salminen; Willem M de Vos; Reetta Satokari
Semi-automated extraction of microbial DNA from feces for qPCR and phylogenetic microarray analysis.
Journal of microbiological methods 2010;83(2):231-5.
2010: Mirjana Rajilić-Stojanović; Annet Maathuis; Hans G H J Heilig; Koen Venema; Willem M de Vos; Hauke Smidt
Evaluating the microbial diversity of an in vitro model of the human large intestine by phylogenetic microarray analysis.
Microbiology (Reading, England) 2010;156(Pt 11):3270-81.
2010: Anne Salonen; Willem M de Vos; Airi Palva
Gastrointestinal microbiota in irritable bowel syndrome: present state and perspectives.
Microbiology (Reading, England) 2010;156(Pt 11):3205-15.
2010: Maria Marco; Maaike C de Vries; Michiel Wels; Douwe Molenaar; Peter Mangell; Siv Ahrne; Willem M de Vos; Elaine E Vaughan; Michiel Kleerebezem
Convergence in probiotic Lactobacillus gut-adaptive responses in humans and mice.
The ISME journal 2010;4(11):1481-4.
2010: Bas Van der Zaan; Hauke Smidt; Willem M de Vos; Huub Rijnaarts; Jan Gerritse
Stability of the total and functional microbial communities in river sediment mesocosms exposed to anthropogenic disturbances.
FEMS microbiology ecology 2010;74(1):72-82.
2010: Janne Nikkilä; Willem M de Vos
Advanced approaches to characterize the human intestinal microbiota by computational meta-analysis.
Journal of clinical gastroenterology 2010;44 Suppl 1():S2-5.
2010: Vítor Martins dos Santos; Michael Müller; Willem M de Vos
Systems biology of the gut: the interplay of food, microbiota and host at the mucosal interface.
Current opinion in biotechnology 2010;21(4):539-50.
2010: Carien C G M Booijink; Jos Boekhorst; Erwin G Zoetendal; Hauke Smidt; Michiel Kleerebezem; Willem M de Vos
Metatranscriptome analysis of the human fecal microbiota reveals subject-specific expression profiles, with genes encoding proteins involved in carbohydrate metabolism being dominantly expressed.
Applied and environmental microbiology 2010;76(16):5533-40.
2010: Neslihan Taş; Miriam H A van Eekert; Willem M de Vos; Hauke Smidt
The little bacteria that can - diversity, genomics and ecophysiology of 'Dehalococcoides' spp. in contaminated environments.
Microbial biotechnology 2010;3(4):389-402.
2010: Farai Maphosa; Hauke Smidt; Willem M de Vos; Wilfred F M Röling
Microbial community- and metabolite dynamics of an anoxic dechlorinating bioreactor.
Environmental science & technology 2010;44(13):4884-90.
2010: Jean Guy LeBlanc; Wilbert Sybesma; Marjo Starrenburg; Fernando Sesma; Willem M de Vos; Graciela Savoy de Giori; Jeroen Hugenholtz
Supplementation with engineered Lactococcus lactis improves the folate status in deficient rats.
Nutrition (Burbank, Los Angeles County, Calif.) 2010;26(7-8):835-41.
2010: Farai Maphosa; Willem M de Vos; Hauke Smidt
Exploiting the ecogenomics toolbox for environmental diagnostics of organohalide-respiring bacteria.
Trends in biotechnology 2010;28(6):308-16.
2010: Marc J A Stevens; Douwe Molenaar; Anne de Jong; Willem M de Vos; Michiel Kleerebezem
Involvement of the mannose phosphotransferase system of Lactobacillus plantarum WCFS1 in peroxide stress tolerance.
Applied and environmental microbiology 2010;76(11):3748-52.
2010: Anne Salonen; Janne Nikkilä; Jonna Jalanka-Tuovinen; Outi Immonen; Mirjana Rajilić-Stojanović; Riina A Kekkonen; Airi Palva; Willem M de Vos
Comparative analysis of fecal DNA extraction methods with phylogenetic microarray: effective recovery of bacterial and archaeal DNA using mechanical cell lysis.
Journal of microbiological methods 2010;81(2):127-34.
2010: Ingemar von Ossowski; J Reunanen; Reetta Satokari; Satu Vesterlund; Matti Kankainen; Heikki Huhtinen; Soile Tynkkynen; Seppo Salminen; Willem M de Vos; Airi Palva
Mucosal adhesion properties of the probiotic Lactobacillus rhamnosus GG SpaCBA and SpaFED pilin subunits.
Applied and environmental microbiology 2010;76(7):2049-57.
2010: Marc J A Stevens; Douwe Molenaar; Anne de Jong; Willem M de Vos; Michiel Kleerebezem
sigma54-Mediated control of the mannose phosphotransferase sytem in Lactobacillus plantarum impacts on carbohydrate metabolism.
Microbiology (Reading, England) 2010;156(Pt 3):695-707.
2010: Bas van der Zaan; Fredericke Hannes; Nanne Hoekstra; Huub Rijnaarts; Willem M de Vos; Hauke Smidt; Jan Gerritse
Correlation of Dehalococcoides 16S rRNA and chloroethene-reductive dehalogenase genes with geochemical conditions in chloroethene-contaminated groundwater.
Applied and environmental microbiology 2010;76(3):843-50.
2010: Stijn van der Veen; Saskia van Schalkwijk; Douwe Molenaar; Willem M de Vos; Tjakko Abee; Marjon H J Wells-Bennik
The SOS response of Listeria monocytogenes is involved in stress resistance and mutagenesis.
Microbiology (Reading, England) 2010;156(Pt 2):374-84.
2010: Arno Wegkamp; Astrid E Mars; Magda Faijes; Douwe Molenaar; Ric C H De Vos; Sebastian M J Klaus; Andrew D Hanson; Willem M de Vos; Eddy J Smid
Physiological responses to folate overproduction in Lactobacillus plantarum WCFS1.
Microbial cell factories 2010;9():100.
2010: Albert A de Graaf; Annet Maathuis; Pieter de Waard; Nicolaas E P Deutz; Cor Dijkema; Willem M de Vos; Koen Venema
Profiling human gut bacterial metabolism and its kinetics using [U-13C]glucose and NMR.
NMR in biomedicine 2010;23(1):2-12.
2009: Kerttu Koskenniemi; Johanna Koponen; Matti Kankainen; Kirsi Savijoki; Soile Tynkkynen; Willem M de Vos; Nisse Kalkkinen; Pekka Varmanen
Proteome analysis of Lactobacillus rhamnosus GG using 2-D DIGE and mass spectrometry shows differential protein production in laboratory and industrial-type growth media.
Journal of proteome research 2009;8(11):4993-5007.
2009: Petia Kovatcheva-Datchary; Erwin G Zoetendal; Koen Venema; Willem M de Vos; Hauke Smidt
Tools for the tract: understanding the functionality of the gastrointestinal tract.
Therapeutic advances in gastroenterology 2009;2(4):9-22.
2009: Mirjana Rajilić-Stojanović; Hans G H J Heilig; Douwe Molenaar; Kajsa Kajander; Anu Surakka; Hauke Smidt; Willem M de Vos
Development and application of the human intestinal tract chip, a phylogenetic microarray: analysis of universally conserved phylotypes in the abundant microbiota of young and elderly adults.
Environmental microbiology 2009;11(7):1736-51.
2009: Willem M de Vos
Mining the microbes--the human microbiome as model.
Microbial biotechnology 2009;2(2):153-4.
2009: Rob Brooijmans; Willem M de Vos; Jeroen Hugenholtz
Electron transport chains of lactic acid bacteria - walking on crutches is part of their lifestyle.
F1000 biology reports 2009;1():34.